Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,883,371 |
T→C |
Y223H (TAC→CAC) |
yidC → |
60 KD inner‑membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,883,371 | 0 | T | C | 99.6%
| 858.0
/ NA
| 267 | Y223H (TAC→CAC) | yidC | 60 KD inner‑membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (119/147); minor base A (1/0); total (120/147) |
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 280 total aligned reads displayed.
TTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGG > NC_000913/3883281‑3883460
|
ttGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACt > 2:2489062/1‑93 (MQ=255)
ttGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACt < 2:653835/93‑1 (MQ=255)
ggTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTcc > 1:5156113/1‑93 (MQ=255)
ggTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTcc < 1:5544675/93‑1 (MQ=255)
gTCTGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCa < 2:810937/93‑1 (MQ=255)
gTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCa < 2:352516/93‑1 (MQ=255)
tCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCAc < 1:475333/93‑1 (MQ=255)
tCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCAc < 1:2713855/93‑1 (MQ=255)
aGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGc > 2:754840/1‑93 (MQ=255)
aGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGc > 1:1791987/1‑93 (MQ=255)
aGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGc > 2:3263330/1‑93 (MQ=255)
aGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGc < 2:3814151/93‑1 (MQ=255)
gTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACAGCTACCGTGGCGCCGCGCACTCCACGcc > 2:1040197/1‑93 (MQ=255)
gTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGcc > 2:4833229/1‑93 (MQ=255)
gTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGcc < 1:3348776/93‑1 (MQ=255)
ttGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCt > 2:2131316/1‑93 (MQ=255)
ttGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCt > 1:4836830/1‑93 (MQ=255)
ttGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCt < 1:3387875/93‑1 (MQ=255)
ttGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCt < 1:2238345/93‑1 (MQ=255)
tGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTg < 1:343230/93‑1 (MQ=255)
gAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGa > 1:6136807/1‑93 (MQ=255)
gAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGa < 1:3533884/93‑1 (MQ=255)
gCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACga < 1:5067754/93‑1 (MQ=255)
gCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACga < 1:2501702/93‑1 (MQ=255)
cAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACgag > 1:6005418/1‑93 (MQ=255)
aaTCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACgaga > 2:3081380/1‑93 (MQ=255)
aaTCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACgaga > 1:3551753/1‑93 (MQ=255)
aaTCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACgaga > 1:237216/1‑93 (MQ=255)
aTCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGaa < 2:4745036/93‑1 (MQ=255)
aTCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGaa < 1:1466431/93‑1 (MQ=255)
tCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAg < 1:2849325/93‑1 (MQ=255)
tCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAg < 2:2102607/93‑1 (MQ=255)
ccATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGTCGCGGCGCACTCCACGCCTGACGAGAAGt > 1:767782/1‑93 (MQ=255)
ccATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGt > 2:5900367/1‑93 (MQ=255)
cATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTa < 1:5463123/93‑1 (MQ=255)
aTCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTAt > 1:912952/1‑93 (MQ=255)
aTCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTAt < 1:5897112/93‑1 (MQ=255)
tCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATg > 2:1395335/1‑93 (MQ=255)
tCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATg < 1:1629406/93‑1 (MQ=255)
ctctGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATgaga > 2:2315786/1‑93 (MQ=255)
ctGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGaaa < 1:5619058/93‑1 (MQ=255)
ctGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGaaa < 2:5749591/93‑1 (MQ=255)
ctGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGaaa < 1:1991893/93‑1 (MQ=255)
tGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAAt > 2:5665735/1‑93 (MQ=255)
gCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATa < 2:5466001/93‑1 (MQ=255)
cccGCATCTCGATACCGGAAGCAGCAGCTTCGCACTGCACCTCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACaa < 1:5309037/92‑1 (MQ=255)
aCCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACaa > 2:3633259/1‑93 (MQ=255)
aCCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACaa > 2:1835726/1‑93 (MQ=255)
aCCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACaa < 2:4689409/93‑1 (MQ=255)
cGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGt > 1:4735366/1‑93 (MQ=255)
cATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTc > 1:6278757/1‑93 (MQ=255)
tctcGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGa > 2:374420/1‑93 (MQ=255)
tcGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATa < 1:2951822/93‑1 (MQ=255)
tcGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATa > 1:323532/1‑93 (MQ=255)
tcGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATa > 2:115294/1‑93 (MQ=255)
cGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATAc > 2:2025041/1‑93 (MQ=255)
aTACCGGAAGCACCAACTCCGCACTGCACCCCTCCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCa < 1:3564947/93‑1 (MQ=255)
tACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCAt < 2:2541252/93‑1 (MQ=255)
tACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCAt > 2:178758/1‑93 (MQ=255)
aCCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCAtg > 1:5811011/1‑92 (MQ=255)
ccGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTg < 2:5066581/93‑1 (MQ=255)
cGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGc < 1:4001123/93‑1 (MQ=255)
cGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGc > 1:2271962/1‑93 (MQ=255)
ggAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGcc > 2:2825145/1‑93 (MQ=255)
agcagcAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGAt < 2:6303175/93‑1 (MQ=255)
gcagcaACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATa < 2:236947/93‑1 (MQ=255)
cagcagCTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATaa < 2:942560/93‑1 (MQ=255)
agcaACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAAc > 1:1207860/1‑93 (MQ=255)
caACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGa < 2:1981345/93‑1 (MQ=255)
aaCTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGaa < 1:1521385/93‑1 (MQ=255)
aCTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGaaa > 1:4182422/1‑93 (MQ=255)
cTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGaaaa < 2:2651811/93‑1 (MQ=255)
cTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGaaaa > 1:2986402/1‑93 (MQ=255)
tCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAAcc < 2:5374607/93‑1 (MQ=255)
cGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCt < 1:5009018/93‑1 (MQ=255)
gCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTg < 1:84906/93‑1 (MQ=255)
cACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATGCCATTGCCGATAACGAAAACCTGa < 1:3179186/93‑1 (MQ=255)
aCTGCACCCCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGaa < 2:4454682/93‑1 (MQ=255)
cTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAAc < 1:183799/93‑1 (MQ=255)
gCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACAt > 2:3189674/1‑93 (MQ=255)
gCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACAt < 1:4613370/93‑1 (MQ=255)
acacCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACAtct < 2:4154122/93‑1 (MQ=255)
cacCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACAtctc > 1:4559236/1‑93 (MQ=255)
cccTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATctct < 1:3970781/92‑1 (MQ=255)
acCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATctct > 1:3829961/1‑93 (MQ=255)
ccTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCtt > 2:3915664/1‑93 (MQ=255)
ccTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCtt < 1:1718453/93‑1 (MQ=255)
ccTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCtt < 1:5265158/93‑1 (MQ=255)
cTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTc > 1:4356627/1‑93 (MQ=255)
ttCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCg > 1:1257350/1‑93 (MQ=255)
ttCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCg > 2:172042/1‑93 (MQ=255)
tCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGa > 2:3770728/1‑93 (MQ=255)
cGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGaaa > 2:149184/1‑93 (MQ=255)
gTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAg < 1:1143398/93‑1 (MQ=255)
tGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAgg > 2:4609779/1‑93 (MQ=255)
tGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAgg < 1:1940500/93‑1 (MQ=255)
gcgcGGCGCACTCCACTCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAggtg < 2:1314777/93‑1 (MQ=255)
cggcgCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGtt < 1:5692864/93‑1 (MQ=255)
ggcgCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTg > 1:2676063/1‑93 (MQ=255)
gcgcACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTgg < 2:2904352/93‑1 (MQ=255)
|
TTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGG > NC_000913/3883281‑3883460
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTGG > NC_000913/3883279‑3883464
|
CGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCA < SRR4302533.1195294/94‑1 (MQ=60)
CGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCA > SRR4302533.2045170/1‑94 (MQ=60)
TTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACGCCTTCCGTGGCGCGGCGCACT < SRR4302533.3582734/94‑1 (MQ=60)
TTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACCCCTTCCGTGGCGCGGCGCACTC < SRR4302533.1781826/94‑1 (MQ=60)
TTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTC > SRR4302533.3338692/1‑94 (MQ=60)
TTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTC > SRR4302533.4447806/1‑94 (MQ=60)
TGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCC < SRR4302533.5948681/94‑1 (MQ=60)
TGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCC > SRR4302533.181317/1‑94 (MQ=60)
TGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCC > SRR4302533.5187246/1‑94 (MQ=60)
TGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCC > SRR4302533.5187245/1‑94 (MQ=60)
GGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCA < SRR4302533.5578165/94‑1 (MQ=60)
GTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCAC > SRR4302533.3590706/1‑94 (MQ=60)
TCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACG > SRR4302533.5552947/1‑94 (MQ=60)
TCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACG < SRR4302533.478170/94‑1 (MQ=60)
TCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACG < SRR4302533.2730521/94‑1 (MQ=60)
CAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGC > SRR4302533.1802886/1‑94 (MQ=60)
GTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCT < SRR4302533.1494541/94‑1 (MQ=60)
GTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCT < SRR4302533.3369467/94‑1 (MQ=60)
GTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCT > SRR4302533.4866146/1‑94 (MQ=60)
TTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTG < SRR4302533.1973993/94‑1 (MQ=60)
TTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTG < SRR4302533.2252178/94‑1 (MQ=60)
TTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTG < SRR4302533.3408794/94‑1 (MQ=60)
TTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTG < SRR4302533.4773764/94‑1 (MQ=60)
TGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGA < SRR4302533.2281745/94‑1 (MQ=60)
TGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGA < SRR4302533.345327/94‑1 (MQ=60)
TGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGA > SRR4302533.6173778/1‑94 (MQ=60)
GAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGAC < SRR4302533.3555660/94‑1 (MQ=60)
AAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACG < SRR4302533.3947048/94‑1 (MQ=60)
AGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGA > SRR4302533.3916919/1‑94 (MQ=60)
GCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAG > SRR4302533.6041806/1‑94 (MQ=60)
GCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAG < SRR4302533.5637994/94‑1 (MQ=60)
GCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAG < SRR4302533.2517132/94‑1 (MQ=60)
GCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAG < SRR4302533.5098359/94‑1 (MQ=60)
CAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGA > SRR4302533.238683/1‑94 (MQ=60)
CAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGA < SRR4302533.3379747/94‑1 (MQ=60)
CAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGA > SRR4302533.3573632/1‑94 (MQ=60)
AATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCAGTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAA < SRR4302533.3406900/94‑1 (MQ=60)
AATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAA > SRR4302533.188688/1‑94 (MQ=60)
ATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAG < SRR4302533.1475276/94‑1 (MQ=60)
TCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGTCGCGGCGCACTCCACGCCTGACGAGAAGT > SRR4302533.772311/1‑94 (MQ=60)
TCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGT < SRR4302533.2866858/94‑1 (MQ=60)
TCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGT < SRR4302533.2866857/94‑1 (MQ=60)
TCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGT < SRR4302533.1618648/94‑1 (MQ=60)
TCCATCACTCAGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGT < SRR4302533.53092/94‑1 (MQ=60)
CATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTAT < SRR4302533.5077625/94‑1 (MQ=60)
CATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTAT > SRR4302533.918313/1‑94 (MQ=60)
CATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTAT < SRR4302533.5496038/94‑1 (MQ=60)
ATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATG < SRR4302533.5932725/94‑1 (MQ=60)
ATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATG < SRR4302533.3003423/94‑1 (MQ=60)
TCACTCTGCCACCGCATCTCGATACCGGAAGCAGCACCTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGA < SRR4302533.1227373/94‑1 (MQ=60)
TCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGA < SRR4302533.1639274/94‑1 (MQ=60)
CACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAG > SRR4302533.4602895/1‑94 (MQ=60)
CACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAG < SRR4302533.2710802/94‑1 (MQ=60)
CCTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGA < SRR4302533.1186980/94‑1 (MQ=60)
CTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAA < SRR4302533.2588517/94‑1 (MQ=60)
CTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAAT < SRR4302533.3009731/94‑1 (MQ=60)
CTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAAT < SRR4302533.5653020/94‑1 (MQ=60)
CTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAAT < SRR4302533.2004101/94‑1 (MQ=60)
TGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATA < SRR4302533.6252761/94‑1 (MQ=60)
GCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATAC < SRR4302533.5005173/94‑1 (MQ=60)
CCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACA > SRR4302533.800308/1‑94 (MQ=60)
CCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACA > SRR4302533.5009114/1‑94 (MQ=60)
CCACCGCACCTCGATACCGAAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACA < SRR4302533.1547117/94‑1 (MQ=60)
CACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAA < SRR4302533.3527053/94‑1 (MQ=60)
CCCGCATCTCGATACCGGAAGCAGCAGCTTCGCACTGCACCTCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAG < SRR4302533.5340853/94‑1 (MQ=60)
ACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAG < SRR4302533.908251/94‑1 (MQ=60)
ACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAG < SRR4302533.5222382/94‑1 (MQ=60)
CCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGT < SRR4302533.901690/94‑1 (MQ=60)
CCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGT > SRR4302533.4764069/1‑94 (MQ=60)
CCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGT > SRR4302533.5071752/1‑94 (MQ=60)
CGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTT < SRR4302533.1804402/94‑1 (MQ=60)
GCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTC < SRR4302533.461595/94‑1 (MQ=60)
GCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTC > SRR4302533.6316242/1‑94 (MQ=60)
CATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCG > SRR4302533.4782389/1‑94 (MQ=60)
CATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCG < SRR4302533.149565/94‑1 (MQ=60)
ATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGA > SRR4302533.2878920/1‑94 (MQ=60)
TCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGAT > SRR4302533.3099187/1‑94 (MQ=60)
CTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATA > SRR4302533.325505/1‑94 (MQ=60)
TCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATAC < SRR4302533.2969874/94‑1 (MQ=60)
GATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCA > SRR4302533.2329999/1‑94 (MQ=60)
ATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCAT > SRR4302533.5818330/1‑94 (MQ=60)
ATACCGGAAGCACCAACTCCGCACTGCACCCCTCCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCAT < SRR4302533.3586918/94‑1 (MQ=60)
TACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATT < SRR4302533.5363464/94‑1 (MQ=60)
TACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATG > SRR4302533.5846105/1‑94 (MQ=60)
TACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATC < SRR4302533.372073/94‑1 (MQ=60)
ACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTG < SRR4302533.4647985/94‑1 (MQ=60)
CCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGC > SRR4302533.2286025/1‑94 (MQ=60)
CGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCC < SRR4302533.4025486/94‑1 (MQ=60)
GGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCG > SRR4302533.1651986/1‑94 (MQ=60)
GGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCG > SRR4302533.411033/1‑94 (MQ=60)
GGAAGCAGCAACTTCGCACTGCACACCGTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTAGATACCATTGCCG > SRR4302533.5962483/1‑94 (MQ=60)
GCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAA < SRR4302533.800694/94‑1 (MQ=60)
GCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAA < SRR4302533.2566211/94‑1 (MQ=60)
CAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAAC < SRR4302533.4016016/94‑1 (MQ=60)
CAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAAC < SRR4302533.5567788/94‑1 (MQ=60)
CAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAAC > SRR4302533.3451383/1‑94 (MQ=60)
CAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAAC > SRR4302533.1215112/1‑94 (MQ=60)
AGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACG < SRR4302533.1411521/94‑1 (MQ=60)
AGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACG < SRR4302533.975987/94‑1 (MQ=60)
AGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACG < SRR4302533.3525450/94‑1 (MQ=60)
GCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGA > SRR4302533.4313599/1‑94 (MQ=60)
GCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGA < SRR4302533.4520667/94‑1 (MQ=60)
GCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGCATGAGAAATACAAGTTCGATACCATTGCCGATAACGA > SRR4302533.5654189/1‑94 (MQ=60)
CAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAA < SRR4302533.6324803/94‑1 (MQ=60)
CAACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAA > SRR4302533.2479060/1‑94 (MQ=60)
AACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAA > SRR4302533.4207752/1‑94 (MQ=60)
AACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAA < SRR4302533.4362536/94‑1 (MQ=60)
AACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAA < SRR4302533.1530544/94‑1 (MQ=60)
ACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAA < SRR4302533.5644665/94‑1 (MQ=60)
ACTTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAA > SRR4302533.3004671/1‑94 (MQ=60)
TTCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACC < SRR4302533.2267653/94‑1 (MQ=60)
TCGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCT < SRR4302533.5103615/94‑1 (MQ=60)
CGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTG < SRR4302533.5039366/94‑1 (MQ=60)
CGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTG < SRR4302533.2332420/94‑1 (MQ=60)
CGCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTG > SRR4302533.3444640/1‑94 (MQ=60)
GCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGA > SRR4302533.1954231/1‑94 (MQ=60)
GCACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGA < SRR4302533.85449/94‑1 (MQ=60)
CACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATGCCATTGCCGATAACGAAAACCTGAA < SRR4302533.3198743/94‑1 (MQ=60)
CACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAA > SRR4302533.1245569/1‑94 (MQ=60)
CACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAA < SRR4302533.1747253/94‑1 (MQ=60)
CACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAA > SRR4302533.2482109/1‑94 (MQ=60)
ACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGCAC < SRR4302533.6126765/94‑1 (MQ=60)
ACTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAAC > SRR4302533.281812/1‑94 (MQ=60)
CTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACA < SRR4302533.5404225/94‑1 (MQ=60)
CTGCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACA < SRR4302533.184943/94‑1 (MQ=60)
GCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATC < SRR4302533.4641316/94‑1 (MQ=60)
GCACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATC > SRR4302533.5850828/1‑94 (MQ=60)
ACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTC > SRR4302533.5299163/1‑94 (MQ=60)
ACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTC < SRR4302533.4729654/94‑1 (MQ=60)
ACACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTC > SRR4302533.4586887/1‑94 (MQ=60)
CACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCT > SRR4302533.3853374/1‑94 (MQ=60)
CACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCT < SRR4302533.2065142/94‑1 (MQ=60)
CCCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTT < SRR4302533.3994961/94‑1 (MQ=60)
ACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTT > SRR4302533.6045793/1‑94 (MQ=60)
ACCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTT > SRR4302533.1456419/1‑94 (MQ=60)
CCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTC < SRR4302533.5296755/94‑1 (MQ=60)
CCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTC > SRR4302533.4382923/1‑94 (MQ=60)
CCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTC > SRR4302533.4842233/1‑94 (MQ=60)
CCTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTC < SRR4302533.1728870/94‑1 (MQ=60)
CTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCG > SRR4302533.1264868/1‑94 (MQ=60)
CTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCG > SRR4302533.2732419/1‑94 (MQ=60)
CTTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCG > SRR4302533.2977732/1‑94 (MQ=60)
TTCCGTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGA < SRR4302533.5866245/94‑1 (MQ=60)
CGCGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAG > SRR4302533.690497/1‑94 (MQ=60)
GTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGG < SRR4302533.1150217/94‑1 (MQ=60)
GTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGG < SRR4302533.4008142/94‑1 (MQ=60)
GTGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGG < SRR4302533.3573111/94‑1 (MQ=60)
TGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGT < SRR4302533.1952335/94‑1 (MQ=60)
TGGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGT < SRR4302533.5826437/94‑1 (MQ=60)
GGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTG < SRR4302533.3242103/94‑1 (MQ=60)
GGCGCGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTG < SRR4302533.1892788/94‑1 (MQ=60)
CGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTG > SRR4302533.2692475/1‑94 (MQ=60)
CGGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTG < SRR4302533.5727244/94‑1 (MQ=60)
GGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGG < SRR4302533.333243/94‑1 (MQ=60)
GGCGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGG < SRR4302533.3576323/94‑1 (MQ=60)
CGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGT > SRR4302533.4329005/1‑94 (MQ=60)
CGCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGG > SRR4302533.1979036/1‑94 (MQ=60)
GCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGACCATCTCTTCGAAAGGTGGTTGGGTG < SRR4302533.4719962/94‑1 (MQ=60)
GCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTG < SRR4302533.4987643/94‑1 (MQ=60)
GCACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTG > SRR4302533.1848385/1‑94 (MQ=60)
CACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTGG > SRR4302533.2458601/1‑94 (MQ=60)
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CGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTGG > NC_000913/3883279‑3883464
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
