Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,945,896 |
T→C |
V63A (GTA→GCA) |
yifE → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,945,896 | 0 | T | C | 100.0%
| 868.1
/ NA
| 268 | V63A (GTA→GCA) | yifE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (148/120); total (148/120) |
Only 100 of 280 total aligned reads displayed.
AACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCAC > NC_000913/3945806‑3945984
|
aaCTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAt > 1:133117/1‑93 (MQ=255)
aaCTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAt < 2:4088736/93‑1 (MQ=255)
aCTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATg > 1:3763360/1‑93 (MQ=255)
tGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGcc < 2:3190844/93‑1 (MQ=255)
tGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGcc < 1:2941674/93‑1 (MQ=255)
tGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGcc < 1:5642660/93‑1 (MQ=255)
gCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCg > 1:2831235/1‑93 (MQ=255)
cTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGt < 2:2303339/93‑1 (MQ=255)
ttGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTg < 2:4026803/93‑1 (MQ=255)
ttGAGCGTCATGGTTATGCCTTCAATGAGCTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTg > 2:3805475/1‑93 (MQ=255)
gAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGc > 1:3142457/1‑93 (MQ=255)
gTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGCAACTCTTAGTAGCAGCATGCCGTGGCGAAc > 1:1817508/1‑93 (MQ=255)
tCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACg > 1:1957988/1‑93 (MQ=255)
tCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACg > 1:3854118/1‑93 (MQ=255)
tCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACg < 1:3544176/93‑1 (MQ=255)
cATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGt > 2:1084324/1‑93 (MQ=255)
cATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGt < 2:1936183/93‑1 (MQ=255)
tGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTgg > 1:70690/1‑92 (MQ=255)
tGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGa > 1:572038/1‑93 (MQ=255)
tGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGa > 2:2167374/1‑93 (MQ=255)
gTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGc < 2:91422/93‑1 (MQ=255)
ttATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGcc > 1:5933329/1‑93 (MQ=255)
tATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCa > 2:1676461/1‑93 (MQ=255)
tATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCa < 1:226293/93‑1 (MQ=255)
tATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGAAAGCCGTGGCGAACGTGAGcct > 2:5876018/1‑92 (MQ=255)
tGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGt > 2:17218/1‑93 (MQ=255)
ccTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGa < 2:135983/93‑1 (MQ=255)
ccTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGa > 1:3650287/1‑93 (MQ=255)
ccTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGa < 1:5391737/93‑1 (MQ=255)
cTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAc > 1:3266849/1‑93 (MQ=255)
cTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAc > 2:4258748/1‑93 (MQ=255)
ttCAATGAGTGGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACa < 2:2914341/93‑1 (MQ=255)
tCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAg > 2:317608/1‑93 (MQ=255)
tCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAg < 2:2238751/93‑1 (MQ=255)
cAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGa > 1:3403724/1‑93 (MQ=255)
cAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGa > 2:650990/1‑93 (MQ=255)
aaTGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGaa > 2:1252521/1‑93 (MQ=255)
aaTGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGaa > 1:2670659/1‑93 (MQ=255)
aaTGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGAGACAGaa > 2:5440746/1‑93 (MQ=255)
aTGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAg > 1:2373459/1‑93 (MQ=255)
tGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAgt < 2:2751018/93‑2 (MQ=255)
tGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGc > 2:3881633/1‑93 (MQ=255)
tGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGc > 1:2665692/1‑93 (MQ=255)
gAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCa < 1:806763/93‑1 (MQ=255)
aGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAg < 2:241549/93‑1 (MQ=255)
ttGGATCTTGGCAACCGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGaa < 2:118314/93‑1 (MQ=255)
ttGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGaa < 1:431993/93‑1 (MQ=255)
ggATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGTCAGTGACAGAAGCAGAAcg < 1:1685279/93‑1 (MQ=255)
ggATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcg > 2:450176/1‑93 (MQ=255)
ggATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcg > 2:4394422/1‑93 (MQ=255)
ggATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcg < 1:4008141/93‑1 (MQ=255)
gagcTTGGCAAGCGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcgc < 2:2533250/90‑1 (MQ=255)
gATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcgc > 2:302769/1‑93 (MQ=255)
gATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcgc < 1:5039807/93‑1 (MQ=255)
gATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcgc > 2:4705128/1‑93 (MQ=255)
aTCTGGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAcgcg < 1:46025/93‑1 (MQ=255)
tCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCgt > 1:2858872/1‑93 (MQ=255)
cTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCgtg > 1:4710078/1‑93 (MQ=255)
ttGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCgtgt > 1:4849409/1‑93 (MQ=255)
ttGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCgtgt > 1:4409182/1‑93 (MQ=255)
aCGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCaa < 2:5993484/93‑1 (MQ=255)
cgcgAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAg < 1:1660866/93‑1 (MQ=255)
cgAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGta > 1:3075257/1‑93 (MQ=255)
aGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGtata < 1:6210368/93‑1 (MQ=255)
aGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGtata < 1:1736036/93‑1 (MQ=255)
gCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTatat < 2:5850202/93‑1 (MQ=255)
gCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTatat < 2:2624410/93‑1 (MQ=255)
cGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGa < 2:3235820/93‑1 (MQ=255)
gTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGAcg < 2:3361189/93‑1 (MQ=255)
ttACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGAcgc < 1:4251514/93‑1 (MQ=255)
aCCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGt < 2:1580892/93‑1 (MQ=255)
ccGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTa < 2:1162270/93‑1 (MQ=255)
ccGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTa > 1:1005448/1‑93 (MQ=255)
acGAGGAAGAGAAACTCTTCTGAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTa < 2:4132014/92‑1 (MQ=255)
gAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTAtt < 2:3534873/93‑1 (MQ=255)
aGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTa < 2:1550277/93‑1 (MQ=255)
ggAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTaa > 1:2313031/1‑93 (MQ=255)
gAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAg > 1:2105011/1‑93 (MQ=255)
gAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAg < 1:1504616/93‑1 (MQ=255)
gAAGAGAAACTCTTCGTAGCAGCATACCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAg < 2:4892617/93‑1 (MQ=255)
aaGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGc < 1:3324840/93‑1 (MQ=255)
gagaAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGt > 1:6084501/1‑93 (MQ=255)
agaAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTc < 1:2174397/93‑1 (MQ=255)
agaAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTc < 2:3685930/93‑1 (MQ=255)
gaAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTcc > 1:5503603/1‑93 (MQ=255)
gaAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTcc > 1:90989/1‑93 (MQ=255)
aaaCTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCa > 2:3945453/1‑93 (MQ=255)
aaCTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCaa > 2:3719454/1‑93 (MQ=255)
aCTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCaaa > 2:5535694/1‑93 (MQ=255)
ttCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGt > 2:1894958/1‑93 (MQ=255)
ttCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGt > 2:5774002/1‑93 (MQ=255)
tCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGtt < 1:4097692/93‑1 (MQ=255)
tCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGtt < 1:351617/93‑1 (MQ=255)
cGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGttt < 2:1473944/93‑1 (MQ=255)
gTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGtttt < 1:1177718/93‑1 (MQ=255)
gTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGtttt < 2:5280579/93‑1 (MQ=255)
gTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGtttt > 2:4599212/1‑93 (MQ=255)
agcagcATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTca < 2:5087524/93‑1 (MQ=255)
gcagcaTGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTcac > 2:6245285/1‑93 (MQ=255)
gcagcaTGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTcac > 1:1280708/1‑93 (MQ=255)
|
AACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCAC > NC_000913/3945806‑3945984
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCT > NC_000913/3945803‑3945989
|
CACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGC < SRR4302533.4916832/94‑1 (MQ=60)
ACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCA > SRR4302533.2328475/1‑94 (MQ=60)
CAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAT > SRR4302533.2331075/1‑94 (MQ=60)
CAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAT < SRR4302533.2897370/94‑1 (MQ=60)
CAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAT > SRR4302533.133956/1‑94 (MQ=60)
CAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAT > SRR4302533.422883/1‑94 (MQ=60)
AAACTGCTTGAGCGTCATGGTTATGCCTTAAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCAT < SRR4302533.5358588/94‑1 (MQ=60)
AACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATG > SRR4302533.596346/1‑94 (MQ=60)
AACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATG > SRR4302533.3786430/1‑94 (MQ=60)
TGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCG > SRR4302533.2682901/1‑94 (MQ=60)
TGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCG < SRR4302533.2959639/94‑1 (MQ=60)
TGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCG < SRR4302533.5676767/94‑1 (MQ=60)
TGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCG > SRR4302533.4452498/1‑94 (MQ=60)
TGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCG > SRR4302533.2848657/1‑94 (MQ=60)
TTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTG < SRR4302533.1797970/94‑1 (MQ=60)
TGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGC > SRR4302533.3161773/1‑94 (MQ=60)
TGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGC < SRR4302533.3818278/94‑1 (MQ=60)
CGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGCAACTCTTAGTAGCAGCATGCCGTGGCGAAC > SRR4302533.1828609/1‑94 (MQ=60)
CGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAAC < SRR4302533.1797954/94‑1 (MQ=60)
CGTCATGGTTACGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAAC > SRR4302533.6144777/1‑94 (MQ=60)
GTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACG < SRR4302533.1292313/94‑1 (MQ=60)
GTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACG > SRR4302533.1969940/1‑94 (MQ=60)
GTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACG > SRR4302533.3877658/1‑94 (MQ=60)
TCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGGAACTCTTCGTAGCAGCATGCCGTGGCGAACGT > SRR4302533.2553087/1‑94 (MQ=60)
TCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGT < SRR4302533.3566018/94‑1 (MQ=60)
TCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGT > SRR4302533.729996/1‑94 (MQ=60)
CATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTG < SRR4302533.3242669/94‑1 (MQ=60)
CATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTG < SRR4302533.4768932/94‑1 (MQ=60)
CATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTG > SRR4302533.3010377/1‑94 (MQ=60)
ATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGG > SRR4302533.71147/1‑94 (MQ=60)
ATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGA > SRR4302533.575414/1‑94 (MQ=60)
ATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGA > SRR4302533.1678470/1‑94 (MQ=60)
TGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAG > SRR4302533.4661516/1‑94 (MQ=60)
TGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAG > SRR4302533.2691419/1‑94 (MQ=60)
GGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGACCGTGAGC > SRR4302533.3999859/1‑94 (MQ=60)
GGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGC > SRR4302533.4218350/1‑94 (MQ=60)
GTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCC > SRR4302533.5969198/1‑94 (MQ=60)
TTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCA > SRR4302533.153841/1‑94 (MQ=60)
TATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAG < SRR4302533.227704/94‑1 (MQ=60)
TATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAG > SRR4302533.1870454/1‑94 (MQ=60)
GCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGA > SRR4302533.3672732/1‑94 (MQ=60)
CCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAC > SRR4302533.2312583/1‑94 (MQ=60)
CCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAC > SRR4302533.3287008/1‑94 (MQ=60)
CCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAC < SRR4302533.5424131/94‑1 (MQ=60)
CCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGAC < SRR4302533.4550505/94‑1 (MQ=60)
TCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGA > SRR4302533.4826269/1‑94 (MQ=60)
TCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGA > SRR4302533.3424741/1‑94 (MQ=60)
CAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAA > SRR4302533.2687038/1‑94 (MQ=60)
AATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAG > SRR4302533.2924621/1‑94 (MQ=60)
AATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAG > SRR4302533.2388147/1‑94 (MQ=60)
ATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGC > SRR4302533.2682049/1‑94 (MQ=60)
TGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCA > SRR4302533.234616/1‑94 (MQ=60)
TGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCA > SRR4302533.3728030/1‑94 (MQ=60)
GAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAG < SRR4302533.811504/94‑1 (MQ=60)
GAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAG < SRR4302533.3446589/94‑1 (MQ=60)
AGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGA > SRR4302533.3514863/1‑94 (MQ=60)
AGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGA < SRR4302533.1716957/94‑1 (MQ=60)
TTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAC > SRR4302533.5642451/1‑94 (MQ=60)
TTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAC < SRR4302533.434567/94‑1 (MQ=60)
TTGGATCTCGGCAACCGCGAGCCGGTTACGGAGGAAGAGAACCTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAAC < SRR4302533.388775/94‑1 (MQ=60)
GGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGTCAGTGACAGAAGCAGAACGC < SRR4302533.1695488/94‑1 (MQ=60)
GGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGC < SRR4302533.4032546/94‑1 (MQ=60)
GATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCG > SRR4302533.6185368/1‑94 (MQ=60)
GATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCG < SRR4302533.5070317/94‑1 (MQ=60)
ATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGT > SRR4302533.2876461/1‑94 (MQ=60)
ATCTGGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGT < SRR4302533.46344/94‑1 (MQ=60)
TCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTG > SRR4302533.4738625/1‑94 (MQ=60)
CTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGT > SRR4302533.4435808/1‑94 (MQ=60)
CTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGT > SRR4302533.3381092/1‑94 (MQ=60)
CTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGT > SRR4302533.4878796/1‑94 (MQ=60)
CTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGG > SRR4302533.1268076/1‑94 (MQ=60)
CTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGG > SRR4302533.1482851/1‑94 (MQ=60)
TTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTG < SRR4302533.3261639/94‑1 (MQ=60)
TGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGG < SRR4302533.4396554/94‑1 (MQ=60)
TGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGG < SRR4302533.4394893/94‑1 (MQ=60)
CAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCC > SRR4302533.3621492/1‑94 (MQ=60)
CAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCC > SRR4302533.3658996/1‑94 (MQ=60)
CAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCC > SRR4302533.2121651/1‑94 (MQ=60)
CAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCC > SRR4302533.5702422/1‑94 (MQ=60)
AAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCA > SRR4302533.3347935/1‑94 (MQ=60)
AACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAA > SRR4302533.433388/1‑94 (MQ=60)
ACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAG > SRR4302533.2299681/1‑94 (MQ=60)
CGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGT < SRR4302533.1670908/94‑1 (MQ=60)
CGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGT > SRR4302533.1290014/1‑94 (MQ=60)
GCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGCCAGAAGCAGAACGCGTGTGGTCCAAGTA > SRR4302533.1219235/1‑94 (MQ=60)
GCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTA > SRR4302533.3094130/1‑94 (MQ=60)
GCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTA > SRR4302533.4295337/1‑94 (MQ=60)
CGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTAT < SRR4302533.6014803/94‑1 (MQ=60)
CGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTAT < SRR4302533.983974/94‑1 (MQ=60)
AGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATAT < SRR4302533.2852517/94‑1 (MQ=60)
AGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATAT < SRR4302533.6247614/94‑1 (MQ=60)
AGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATAT < SRR4302533.1746570/94‑1 (MQ=60)
CCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGA < SRR4302533.5450912/94‑1 (MQ=60)
CCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGA > SRR4302533.1078605/1‑94 (MQ=60)
CGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGAC < SRR4302533.3146142/94‑1 (MQ=60)
GGTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACG > SRR4302533.727722/1‑94 (MQ=60)
GTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGC < SRR4302533.1976429/94‑1 (MQ=60)
GTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGC > SRR4302533.5739991/1‑94 (MQ=60)
GTTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGC > SRR4302533.1886328/1‑94 (MQ=60)
TTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCG < SRR4302533.4277161/94‑1 (MQ=60)
TTACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCG > SRR4302533.5825300/1‑94 (MQ=60)
ACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTA > SRR4302533.2196566/1‑94 (MQ=60)
ACCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTA > SRR4302533.1011328/1‑94 (MQ=60)
CCGAGGAAGAGAAGCTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTAT < SRR4302533.2110133/94‑1 (MQ=60)
CCGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTAT < SRR4302533.3066754/94‑1 (MQ=60)
CGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATT > SRR4302533.1744582/1‑94 (MQ=60)
CGAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATT > SRR4302533.3735618/1‑94 (MQ=60)
GAGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTA > SRR4302533.1548171/1‑94 (MQ=60)
AGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAA > SRR4302533.833642/1‑94 (MQ=60)
AGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAA > SRR4302533.4039089/1‑94 (MQ=60)
AGGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAA > SRR4302533.2327359/1‑94 (MQ=60)
GGAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAG > SRR4302533.2117992/1‑94 (MQ=60)
GAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGC < SRR4302533.1513690/94‑1 (MQ=60)
GAAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGC < SRR4302533.5405206/94‑1 (MQ=60)
AAGAGAAATTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG > SRR4302533.3334591/1‑94 (MQ=60)
AAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG < SRR4302533.5000235/94‑1 (MQ=60)
AAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG < SRR4302533.3345381/94‑1 (MQ=60)
AAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG > SRR4302533.626301/1‑94 (MQ=60)
AAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG > SRR4302533.2837183/1‑94 (MQ=60)
AAGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCG > SRR4302533.3547002/1‑94 (MQ=60)
AGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGT < SRR4302533.2192952/94‑1 (MQ=60)
AGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGT < SRR4302533.1391098/94‑1 (MQ=60)
AGAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGT > SRR4302533.6121289/1‑94 (MQ=60)
GAGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTC > SRR4302533.6017134/1‑94 (MQ=60)
AGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCC < SRR4302533.2187796/94‑1 (MQ=60)
AGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCC > SRR4302533.5536808/1‑94 (MQ=60)
AGAAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCC > SRR4302533.91563/1‑94 (MQ=60)
AAACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAA < SRR4302533.329927/94‑1 (MQ=60)
AACTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAA > SRR4302533.5308607/1‑94 (MQ=60)
CTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAAC < SRR4302533.2650066/94‑1 (MQ=60)
CTCTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAAC > SRR4302533.2857062/1‑94 (MQ=60)
CTTCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGT > SRR4302533.5536265/1‑94 (MQ=60)
TCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTT < SRR4302533.353762/94‑1 (MQ=60)
TCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTT < SRR4302533.4122635/94‑1 (MQ=60)
TCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTT < SRR4302533.871019/94‑1 (MQ=60)
TCGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTT > SRR4302533.2896389/1‑94 (MQ=60)
CGTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTT < SRR4302533.4955179/94‑1 (MQ=60)
GTAGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTC < SRR4302533.1184786/94‑1 (MQ=60)
AGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCAC > SRR4302533.1288408/1‑94 (MQ=60)
AGCAGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCAC > SRR4302533.3825823/1‑94 (MQ=60)
AGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACC > SRR4302533.3338103/1‑94 (MQ=60)
AGCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACC > SRR4302533.3369480/1‑94 (MQ=60)
GCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCC > SRR4302533.5637242/1‑94 (MQ=60)
GCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCC > SRR4302533.2538990/1‑94 (MQ=60)
GCATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCC < SRR4302533.532560/94‑1 (MQ=60)
CATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCT < SRR4302533.5386808/94‑1 (MQ=60)
CATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCT < SRR4302533.5357322/94‑1 (MQ=60)
|
CACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCT > NC_000913/3945803‑3945989
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
