Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,374,875	T→G	T61P (ACC→CCC)	sspA ←	stringent starvation protein A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,374,875	0	T	G	98.6%	1703.5 / 1.6	496	T61P (ACC→CCC)	sspA	stringent starvation protein A
Reads supporting (aligned to +/- strand): ref base T (3/4); new base G (266/223); total (269/227)
Fisher's exact test for biased strand distribution p-value = 7.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 506 total aligned reads displayed.

ACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTC  >  NC_000913/3374784‑3374965

aCAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCg                                                                                          <  2:7499201/94‑1 (MQ=255)

  aGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGa                                                                                        <  1:2364858/94‑1 (MQ=255)

   ggCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGaa                                                                                       <  1:10040632/94‑1 (MQ=255)

   ggCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGaa                                                                                       <  2:2542318/94‑1 (MQ=255)

    gCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAAc                                                                                      >  1:4757919/1‑94 (MQ=255)

    gCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAAc                                                                                      >  2:10383716/1‑94 (MQ=255)

      aTCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGc                                                                                    >  2:9563990/1‑94 (MQ=255)

       tCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGct                                                                                   >  1:8684348/1‑94 (MQ=255)

       tCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGct                                                                                   <  1:6601133/94‑1 (MQ=255)

        cAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctc                                                                                  <  1:1154142/94‑1 (MQ=255)

        cAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctc                                                                                  >  2:5026639/1‑94 (MQ=255)

        cAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctc                                                                                  >  2:5828855/1‑94 (MQ=255)

        cAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctc                                                                                  >  1:1889143/1‑94 (MQ=255)

         aGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctct                                                                                 >  2:4509570/1‑94 (MQ=255)

         aGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctct                                                                                 <  2:9089673/94‑1 (MQ=255)

         aGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGctct                                                                                 <  1:8799107/94‑1 (MQ=255)

          gTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTg                                                                                >  1:3199932/1‑94 (MQ=255)

           tGGCGGATGCGGGAAACGCTCATCCAGATATTCCATTATGATGCGAGATTTTCACATGGTCAGCTCATGATCCACCAGGGGCGGAACGCTCTgt                                                                               >  1:9686567/1‑93 (MQ=255)

              cGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTc                                                                            >  2:10493319/1‑94 (MQ=255)

               ggATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCg                                                                           <  1:7095541/94‑1 (MQ=255)

               ggATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCg                                                                           >  1:10192940/1‑94 (MQ=255)

               ggATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCg                                                                           <  1:350247/94‑1 (MQ=255)

                gATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCgg                                                                          <  2:9724222/94‑1 (MQ=255)

                gATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCgg                                                                          <  1:4935926/94‑1 (MQ=255)

                gATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCgg                                                                          <  1:6736751/94‑1 (MQ=255)

                 aTGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCggg                                                                         <  1:2537466/94‑1 (MQ=255)

                   gcgcGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGtt                                                                       <  1:5916889/94‑1 (MQ=255)

                      ggAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAg                                                                    <  1:7338806/94‑1 (MQ=255)

                        aaaCGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGt                                                                  >  2:4387408/1‑94 (MQ=255)

                        aaaCGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGt                                                                  <  1:6525802/94‑1 (MQ=255)

                            gCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAAt                                                              <  2:3511203/94‑1 (MQ=255)

                             cTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACACGGGGCGGAACGGTCTGATTGGGGTGGAGGTAAATc                                                             >  2:2969189/1‑94 (MQ=255)

                              tCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCa                                                            >  2:2464538/1‑94 (MQ=255)

                              tCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAAGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCa                                                            <  2:3723934/94‑1 (MQ=255)

                               cATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAg                                                           >  2:9387496/1‑94 (MQ=255)

                                aTCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGa                                                          >  2:7369142/1‑94 (MQ=255)

                                aTCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGa                                                          >  1:845265/1‑94 (MQ=255)

                                aTCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGa                                                          >  1:5255081/1‑94 (MQ=255)

                                  ccAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATc                                                        >  2:10194690/1‑94 (MQ=255)

                                  ccAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATc                                                        >  2:5264155/1‑94 (MQ=255)

                                    aGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCt                                                      >  1:2038478/1‑94 (MQ=255)

                                    aGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCt                                                      >  2:3298117/1‑94 (MQ=255)

                                      atatTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGa                                                    >  2:1354636/1‑94 (MQ=255)

                                      atatTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGa                                                    >  1:3774143/1‑94 (MQ=255)

                                       tatTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAg                                                   <  2:1978041/94‑1 (MQ=255)

                                        atTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAgg                                                  <  1:8100747/94‑1 (MQ=255)

                                         ttCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGc                                                 <  2:8801743/94‑1 (MQ=255)

                                         ttCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGc                                                 >  2:7952549/1‑94 (MQ=255)

                                           ccATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCgg                                               >  1:7554004/1‑94 (MQ=255)

                                             aTAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGAt                                             >  1:6982300/1‑94 (MQ=255)

                                              tAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGAtt                                            >  2:5606421/1‑94 (MQ=255)

                                              tAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGAtt                                            >  2:8267831/1‑94 (MQ=255)

                                               aaTGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTg                                           >  2:4201084/1‑94 (MQ=255)

                                               aaTGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTg                                           <  2:10615886/94‑1 (MQ=255)

                                                atgatgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGt                                          >  2:5418965/1‑94 (MQ=255)

                                                 tgatgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAAGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATtctc                                         >  1:8968102/1‑94 (MQ=255)

                                                  gatgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTcc                                        <  2:5999666/94‑1 (MQ=255)

                                                  gatgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTcc                                        >  1:5512678/1‑94 (MQ=255)

                                                   atgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCt                                       >  1:146501/1‑94 (MQ=255)

                                                   atgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCt                                       <  2:6449470/94‑1 (MQ=255)

                                                   atgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCt                                       <  2:4655663/94‑1 (MQ=255)

                                                    tgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGCTCCTGAGGCGGATTGTCCtt                                      >  2:8625520/1‑94 (MQ=255)

                                                    tgCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCtt                                      >  2:6056117/1‑94 (MQ=255)

                                                      cGAGATTCCCCCTGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCtttt                                    <  1:9361656/94‑1 (MQ=255)

                                                      cGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCtttt                                    <  2:8058031/94‑1 (MQ=255)

                                                      cGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCtttt                                    >  1:9468/1‑94 (MQ=255)

                                                       gagaTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTc                                   >  2:6788772/1‑94 (MQ=255)

                                                        agaTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTcc                                  >  2:2282089/1‑94 (MQ=255)

                                                         gaTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCa                                 <  2:1690760/94‑1 (MQ=255)

                                                          aTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCAc                                >  1:7275380/1‑94 (MQ=255)

                                                          aTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCAc                                <  1:4598227/94‑1 (MQ=255)

                                                          aTTCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCAc                                >  2:6953966/1‑94 (MQ=255)

                                                            tCCCACAGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACgt                              <  2:7761327/94‑1 (MQ=255)

                                                                acaGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTc                          >  1:1342413/1‑94 (MQ=255)

                                                                acaGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTc                          <  2:8441845/94‑1 (MQ=255)

                                                                acaGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTc                          <  1:2183935/94‑1 (MQ=255)

                                                                acaGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTc                          <  2:4050439/94‑1 (MQ=255)

                                                                 caGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCg                         >  1:3329209/1‑94 (MQ=255)

                                                                 caGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCg                         <  2:1295934/94‑1 (MQ=255)

                                                                  aGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGa                        <  2:870341/94‑1 (MQ=255)

                                                                  aGGGTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGa                        <  2:6207918/94‑1 (MQ=255)

                                                                   gggTCAGCTCACGATCCACCAGGTGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGAt                       <  1:5804083/94‑1 (MQ=255)

                                                                   gggTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGAt                       <  1:10407755/94‑1 (MQ=255)

                                                                     gTCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGAtct                     >  2:8967788/1‑94 (MQ=255)

                                                                      tCAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGAtctc                    <  1:6176202/94‑1 (MQ=255)

                                                                      gcAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCC‑TTTCCACGTGTTCGATCTCg                   <  1:6417227/93‑1 (MQ=255)

                                                                       cAGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCg                   >  2:9820317/1‑94 (MQ=255)

                                                                        aGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGa                  >  1:1624147/1‑94 (MQ=255)

                                                                        aGCTCACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGa                  >  1:4064561/1‑94 (MQ=255)

                                                                            cACGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACt              >  1:10301465/1‑94 (MQ=255)

                                                                             aCGATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGACTGTCCTTTTCCACGTGTTCGATCTCGAAACtt             <  2:5776986/94‑1 (MQ=255)

                                                                               gATCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTac           >  1:5109134/1‑94 (MQ=255)

                                                                                aTCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTaca          <  2:10116976/94‑1 (MQ=255)

                                                                                aTCCACCAGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTaca          >  1:2641742/1‑94 (MQ=255)

                                                                                  ccaccaGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACAcc        >  1:3020952/1‑94 (MQ=255)

                                                                                   caccaGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCt       <  1:4288100/94‑1 (MQ=255)

                                                                                   caccaGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCt       <  1:1555497/94‑1 (MQ=255)

                                                                                    cccaGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCtt      <  1:10519562/93‑1 (MQ=255)

                                                                                    accaGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGCAACTTACACCtt      <  1:10448246/94‑1 (MQ=255)

                                                                                      caGGGGCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTtc    >  1:7974923/1‑94 (MQ=255)

ACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTC  >  NC_000913/3374784‑3374965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 290 total aligned reads displayed.

ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGTG  >  NC_000913/3375962‑3376148

ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGC                                                                                               <  SRR4302545.6070900/94‑1 (MQ=60)

ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGC                                                                                               <  SRR4302545.4201485/94‑1 (MQ=60)

ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGC                                                                                               <  SRR4302545.5862991/94‑1 (MQ=60)

ACATGCATTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGC                                                                                               <  SRR4302545.9924125/94‑1 (MQ=60)

 CATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCG                                                                                              <  SRR4302545.6094849/94‑1 (MQ=60)

  ATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGT                                                                                             <  SRR4302545.3975240/94‑1 (MQ=60)

  ATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGT                                                                                             <  SRR4302545.350733/94‑1 (MQ=60)

  ATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGT                                                                                             >  SRR4302545.784781/1‑94 (MQ=60)

   TGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTG                                                                                            <  SRR4302545.4477956/94‑1 (MQ=60)

   TGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTG                                                                                            >  SRR4302545.5996114/1‑94 (MQ=60)

    GCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGG                                                                                           >  SRR4302545.3555784/1‑94 (MQ=60)

     CCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGT                                                                                          >  SRR4302545.5124834/1‑94 (MQ=60)

      CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATTCCACCGATGTGGCCGGCGTGGTG                                                                                         >  SRR4302545.7106233/1‑94 (MQ=60)

      CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTG                                                                                         >  SRR4302545.4201320/1‑94 (MQ=60)

      CTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTG                                                                                         <  SRR4302545.836046/94‑1 (MQ=60)

       TTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGA                                                                                        >  SRR4302545.4851182/1‑94 (MQ=60)

       TTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGA                                                                                        <  SRR4302545.5344753/94‑1 (MQ=60)

       TTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGA                                                                                        <  SRR4302545.8879617/94‑1 (MQ=60)

        TTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGAT                                                                                       <  SRR4302545.9564042/94‑1 (MQ=60)

        TTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGAT                                                                                       >  SRR4302545.6172415/1‑94 (MQ=60)

         TAACCGCGATTTCAATCACACGGTCAGGACGGAGAGCAAACATCTCGTCGAACGCCGCTTGTTTGATACCACCGATAGGGCCGGCGTGGTGATA                                                                                      >  SRR4302545.9853474/1‑94 (MQ=42)

         TAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATA                                                                                      <  SRR4302545.7022897/94‑1 (MQ=60)

          AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCCCCGATGTGGCCGGCGTGGTGATAG                                                                                     <  SRR4302545.1820157/94‑1 (MQ=60)

          AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAG                                                                                     >  SRR4302545.2180600/1‑94 (MQ=60)

          AACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGGGATAG                                                                                     >  SRR4302545.2123250/1‑94 (MQ=60)

           ACCGCGATTTCAATCACGCGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGT                                                                                    <  SRR4302545.3419901/94‑1 (MQ=60)

            CCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTA                                                                                   >  SRR4302545.3476940/1‑94 (MQ=60)

            CCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTA                                                                                   >  SRR4302545.4619892/1‑94 (MQ=60)

             CGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTAC                                                                                  >  SRR4302545.5573758/1‑94 (MQ=60)

             CGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGAGTGAGGATAGTAC                                                                                  >  SRR4302545.5669124/1‑94 (MQ=60)

              GCGATTTCAATCACACTCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACA                                                                                 <  SRR4302545.7627953/94‑1 (MQ=60)

              GCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACA                                                                                 <  SRR4302545.2260491/94‑1 (MQ=60)

               CGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACAC                                                                                >  SRR4302545.10891825/1‑94 (MQ=60)

                GATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACT                                                                               >  SRR4302545.10077434/1‑94 (MQ=60)

                GATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACT                                                                               <  SRR4302545.8278572/94‑1 (MQ=60)

                 CTTTCAATCACACGCTCAGGACGGCGAGCCATCATCTCCTCAAAGGTCGCTTGTTTGATACCACCGATGTGTCCGGCGTGGTGATAGaccactg                                                                              >  SRR4302545.10880459/1‑87 (MQ=60)

                 ATTTCAATCACACGCTCAGGGCGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTT                                                                              <  SRR4302545.8596934/94‑1 (MQ=60)

                 ATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTT                                                                              <  SRR4302545.1069517/94‑1 (MQ=60)

                 ATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTT                                                                              >  SRR4302545.10880460/1‑94 (MQ=60)

                  TTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTT                                                                             >  SRR4302545.4340221/1‑94 (MQ=60)

                   TTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTG                                                                            <  SRR4302545.5277871/94‑1 (MQ=60)

                   TTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTG                                                                            <  SRR4302545.2404003/94‑1 (MQ=60)

                    TCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGC                                                                           >  SRR4302545.9149110/1‑94 (MQ=60)

                    TCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACAATTTGT                                                                           >  SRR4302545.4103000/1‑94 (MQ=60)

                    TCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGACGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATtgacccctttgt                                                                           <  SRR4302545.9695227/94‑13 (MQ=60)

                     CAATCACACGCTCAGGACGGCGATCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTC                                                                          <  SRR4302545.7429243/94‑1 (MQ=60)

                     CAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGACGCTTGTTTGATACCACCGATGTGGACGGCGTGGTGATAGTACACTTTGTC                                                                          >  SRR4302545.5851184/1‑94 (MQ=60)

                      AATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCA                                                                         <  SRR4302545.2291550/94‑1 (MQ=60)

                      AATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCA                                                                         >  SRR4302545.1712497/1‑94 (MQ=60)

                       ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAG                                                                        <  SRR4302545.8509119/94‑1 (MQ=60)

                       ATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGGGGGGATAGTACACTTGGTCAG                                                                        >  SRR4302545.8293328/1‑94 (MQ=60)

                        TCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGT                                                                       <  SRR4302545.7871740/94‑1 (MQ=60)

                        TCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGT                                                                       <  SRR4302545.1813641/94‑1 (MQ=60)

                         CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTC                                                                      >  SRR4302545.3856324/1‑94 (MQ=60)

                         CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTA                                                                      <  SRR4302545.4068529/94‑1 (MQ=60)

                         CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTA                                                                      <  SRR4302545.3736338/94‑1 (MQ=60)

                         CACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTA                                                                      >  SRR4302545.8452970/1‑94 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     <  SRR4302545.4702836/94‑1 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     <  SRR4302545.10563877/94‑1 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     >  SRR4302545.3761458/1‑94 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     >  SRR4302545.1118789/1‑94 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     >  SRR4302545.965416/1‑94 (MQ=60)

                          ACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTAC                                                                     <  SRR4302545.8331683/94‑1 (MQ=60)

                           CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACG                                                                    >  SRR4302545.9301450/1‑94 (MQ=60)

                           CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACG                                                                    <  SRR4302545.2127072/94‑1 (MQ=60)

                           CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACG                                                                    >  SRR4302545.3443504/1‑94 (MQ=60)

                           CACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACC                                                                    >  SRR4302545.9301449/1‑94 (MQ=60)

                            ACGCTCAGGACGGCGAGCAATCATCTCTTCGAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGC                                                                   >  SRR4302545.3100921/1‑94 (MQ=60)

                             CGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCT                                                                  >  SRR4302545.8345274/1‑94 (MQ=60)

                              GCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTT                                                                 >  SRR4302545.8687947/1‑94 (MQ=60)

                              GCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTT                                                                 >  SRR4302545.8449976/1‑94 (MQ=60)

                              GCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATACTACACTTTGTCAGTACGCTT                                                                 <  SRR4302545.1945299/94‑1 (MQ=60)

                               CTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTG                                                                >  SRR4302545.8684807/1‑94 (MQ=60)

                               CTCAGGACGGCGAGCAATCATCTCATCAATGGTCACTTGTTTGATACCACCGAAGTGGCCGGCGTGGTAATAGTACACTTTGTCAGTACGCTTG                                                                <  SRR4302545.9623088/94‑1 (MQ=60)

                                TCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGT                                                               >  SRR4302545.1625695/1‑94 (MQ=60)

                                TCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGT                                                               <  SRR4302545.4491895/94‑1 (MQ=60)

                                 CAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTT                                                              >  SRR4302545.528008/1‑94 (MQ=60)

                                  CGGACGGAGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             <  SRR4302545.9036047/94‑1 (MQ=60)

                                  AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             >  SRR4302545.360962/1‑94 (MQ=60)

                                  AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             >  SRR4302545.3932645/1‑94 (MQ=60)

                                  AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             >  SRR4302545.3932646/1‑94 (MQ=60)

                                  AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             <  SRR4302545.124938/94‑1 (MQ=60)

                                  AGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTG                                                             <  SRR4302545.2177336/94‑1 (MQ=60)

                                  AGGACGGATAGCAATCAGCTCTTCAAAGGTCGCTTGTTTGAGCCAACCGATGTGGCCGGCGTGCTGATGGTGCACTTTGCCAGTACGCTTGTTG                                                             <  SRR4302545.7169785/94‑1 (MQ=34)

                                   GGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGC                                                            <  SRR4302545.3011619/94‑1 (MQ=60)

                                   GGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGC                                                            >  SRR4302545.2943985/1‑94 (MQ=60)

                                   GGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGC                                                            >  SRR4302545.6594431/1‑94 (MQ=60)

                                    GACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCC                                                           >  SRR4302545.9938404/1‑94 (MQ=60)

                                    GACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCC                                                           <  SRR4302545.1489978/94‑1 (MQ=60)

                                     ACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCG                                                          <  SRR4302545.3343579/94‑1 (MQ=60)

                                      CGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGG                                                         <  SRR4302545.3585271/94‑1 (MQ=60)

                                       gaatatagctttttcgtaaaagggctGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGT                                                        <  SRR4302545.1376603/68‑1 (MQ=60)

                                       GGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTCCACTTTGTCAGTACGCTTGTTGCCGGT                                                        <  SRR4302545.10418195/94‑1 (MQ=60)

                                       GGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGT                                                        >  SRR4302545.7707114/1‑94 (MQ=60)

                                         CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA                                                      <  SRR4302545.10494322/94‑1 (MQ=60)

                                         CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA                                                      >  SRR4302545.193406/1‑94 (MQ=60)

                                         CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA                                                      >  SRR4302545.10056979/1‑94 (MQ=60)

                                         CGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGCGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA                                                      <  SRR4302545.10749480/94‑1 (MQ=60)

                                          GAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTGCGCTTGTTGCCGGTTAC                                                     >  SRR4302545.659120/1‑94 (MQ=60)

                                          GAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTAC                                                     <  SRR4302545.3485067/94‑1 (MQ=60)

                                           AGCAATCATCTCTTGAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACA                                                    >  SRR4302545.10107272/1‑94 (MQ=60)

                                           AGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACA                                                    >  SRR4302545.5308998/1‑94 (MQ=60)

                                            GCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCGCCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAG                                                   <  SRR4302545.3583228/94‑1 (MQ=60)

                                            GCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACCCTTTGTCAGTACGCTTGTTGCCGGTTACAG                                                   <  SRR4302545.457421/94‑1 (MQ=60)

                                            GCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAG                                                   <  SRR4302545.6835712/94‑1 (MQ=60)

                                             CAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGC                                                  >  SRR4302545.10739340/1‑94 (MQ=60)

                                              AATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCA                                                 <  SRR4302545.10299745/94‑1 (MQ=60)

                                              AATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCA                                                 >  SRR4302545.5192927/1‑94 (MQ=60)

                                              AATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGGACGCTTGTTGCCGGTTACAGCA                                                 >  SRR4302545.5192929/1‑94 (MQ=60)

                                                 CATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT                                              <  SRR4302545.6727074/94‑1 (MQ=60)

                                                 CATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT                                              <  SRR4302545.10458517/94‑1 (MQ=60)

                                                 CATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT                                              >  SRR4302545.839027/1‑94 (MQ=60)

                                                 CATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACT                                              >  SRR4302545.6374123/1‑94 (MQ=60)

                                                 CATCTCTTCAAAGGTCGCTTGTTTGATACAACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGGTTGTTGCTGGTTACAGCAACT                                              >  SRR4302545.4211948/1‑94 (MQ=60)

                                                  ATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT                                             >  SRR4302545.3445166/1‑94 (MQ=60)

                                                  ATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTT                                             <  SRR4302545.1527186/94‑1 (MQ=60)

                                                  ATCTCTGCAAAGATCGCGTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGCCAGTGCTCTTGTTGCTGGTTAatacaactt                                             <  SRR4302545.10793509/94‑10 (MQ=48)

                                                   GCTCTTTAAAGGGCGCTTGTTTGATACCCCCGAGGGGGCCGGCGAGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTTCAGCAACGTT                                            <  SRR4302545.5666262/94‑1 (MQ=55)

                                                    CTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG                                           >  SRR4302545.2872438/1‑94 (MQ=60)

                                                    CTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG                                           >  SRR4302545.3119492/1‑94 (MQ=60)

                                                    CTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG                                           >  SRR4302545.3119493/1‑94 (MQ=60)

                                                    CTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTG                                           <  SRR4302545.4413921/94‑1 (MQ=60)

                                                     TCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGT                                          <  SRR4302545.5584040/94‑1 (MQ=60)

                                                     TCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGT                                          >  SRR4302545.3262119/1‑94 (MQ=60)

                                                       TTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA                                        >  SRR4302545.10445613/1‑94 (MQ=60)

                                                       TTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA                                        <  SRR4302545.9334117/94‑1 (MQ=60)

                                                       TTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCA                                        <  SRR4302545.7728896/94‑1 (MQ=60)

                                                        TCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAG                                       <  SRR4302545.740631/94‑1 (MQ=60)

                                                         CAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGC                                      <  SRR4302545.4325674/94‑1 (MQ=60)

                                                         CAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGC                                      >  SRR4302545.2721450/1‑94 (MQ=60)

                                                          AAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCG                                     >  SRR4302545.7514033/1‑94 (MQ=60)

                                                          AAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCG                                     <  SRR4302545.6296262/94‑1 (MQ=60)

                                                           AAGGTCGCTTGTTTGATACCGCCGATGTGGCGGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGT                                    <  SRR4302545.4042839/94‑1 (MQ=60)

                                                           AAGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGT                                    <  SRR4302545.4562711/94‑1 (MQ=60)

                                                            AGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTT                                   <  SRR4302545.7561327/94‑1 (MQ=60)

                                                            AGGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTT                                   >  SRR4302545.7467531/1‑94 (MQ=60)

                                                             GGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTC                                  <  SRR4302545.6370947/94‑1 (MQ=60)

                                                             GGTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTC                                  >  SRR4302545.3661955/1‑94 (MQ=60)

                                                              GTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCA                                 >  SRR4302545.7012875/1‑94 (MQ=60)

                                                              GTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCA                                 <  SRR4302545.4798701/94‑1 (MQ=60)

                                                              GTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCA                                 <  SRR4302545.1277055/94‑1 (MQ=60)

                                                              GTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCA                                 <  SRR4302545.10399680/94‑1 (MQ=60)

                                                              GTCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGGACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCA                                 >  SRR4302545.4860446/1‑94 (MQ=60)

                                                               TCGCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAG                                >  SRR4302545.1129536/1‑94 (MQ=60)

                                                                 GCTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAA                              >  SRR4302545.4809791/1‑94 (MQ=60)

                                                                  CTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAC                             >  SRR4302545.4614124/1‑94 (MQ=60)

                                                                  CTTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAAC                             <  SRR4302545.5369285/94‑1 (MQ=60)

                                                                   TTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACG                            >  SRR4302545.1582588/1‑94 (MQ=60)

                                                                   TTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACG                            >  SRR4302545.2093350/1‑94 (MQ=60)

                                                                   TTGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACG                            <  SRR4302545.5016597/94‑1 (MQ=60)

                                                                    TGTTTGCTACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGA                           >  SRR4302545.10835172/1‑94 (MQ=60)

                                                                    TGTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGA                           >  SRR4302545.75722/1‑94 (MQ=60)

                                                                     GTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGAT                          <  SRR4302545.1600657/94‑1 (MQ=60)

                                                                     GTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGAT                          <  SRR4302545.4071177/94‑1 (MQ=60)

                                                                     GTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGAT                          >  SRR4302545.5142428/1‑94 (MQ=60)

                                                                     GTTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGAT                          >  SRR4302545.5142777/1‑94 (MQ=60)

                                                                      TTTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATG                         >  SRR4302545.329047/1‑94 (MQ=60)

                                                                       TTGATACCCCCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGA                        <  SRR4302545.7695965/94‑1 (MQ=60)

                                                                       TTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGA                        <  SRR4302545.8636187/94‑1 (MQ=60)

                                                                       TTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGA                        <  SRR4302545.4105533/94‑1 (MQ=60)

                                                                       TTGATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGA                        <  SRR4302545.5315379/94‑1 (MQ=60)

                                                                         GATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATG                      <  SRR4302545.10462214/94‑1 (MQ=60)

                                                                         GATACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATG                      <  SRR4302545.8938219/94‑1 (MQ=60)

                                                                           TACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTA                    >  SRR4302545.8139504/1‑94 (MQ=60)

                                                                            ACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA                   <  SRR4302545.10636277/94‑1 (MQ=60)

                                                                            ACCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAA                   <  SRR4302545.1500208/94‑1 (MQ=60)

                                                                             CCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAAT                  >  SRR4302545.2478577/1‑94 (MQ=60)

                                                                             CCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAAT                  >  SRR4302545.9225225/1‑94 (MQ=60)

                                                                             CCACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGCTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAAT                  >  SRR4302545.7243906/1‑94 (MQ=60)

                                                                              CACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATC                 <  SRR4302545.2640676/94‑1 (MQ=60)

                                                                               ACCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCA                >  SRR4302545.8245256/1‑94 (MQ=60)

                                                                                CCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCAC               <  SRR4302545.9389542/94‑1 (MQ=60)

                                                                                CCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCAC               >  SRR4302545.2810876/1‑94 (MQ=60)

                                                                                CCGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCAC               >  SRR4302545.2798715/1‑94 (MQ=60)

                                                                                CCGATGTGGCAGGCGTGGTGCTAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGTAACTTTGTCAGCGTTCAGAACGCTGATGTAATCAC               >  SRR4302545.1456663/1‑94 (MQ=60)

                                                                                 CGATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACC              >  SRR4302545.6873017/1‑94 (MQ=60)

                                                                                  GATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCG             >  SRR4302545.9496485/1‑94 (MQ=60)

                                                                                   ATGTGGCCGGCGTGGTGATAGTACCCTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGG            <  SRR4302545.5091822/94‑1 (MQ=60)

                                                                                   ATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGG            >  SRR4302545.6085012/1‑94 (MQ=60)

                                                                                   ATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGG            <  SRR4302545.6885252/94‑1 (MQ=60)

                                                                                   ATGTGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGG            <  SRR4302545.3067255/94‑1 (MQ=60)

                                                                                      TGGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTAT         <  SRR4302545.8595725/94‑1 (MQ=60)

                                                                                       GGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGCACGATGATGTAATTACCGGTATC        >  SRR4302545.10211943/1‑94 (MQ=60)

                                                                                       GGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATC        <  SRR4302545.6156623/94‑1 (MQ=60)

                                                                                       GGCCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATC        <  SRR4302545.4429035/94‑1 (MQ=60)

                                                                                         CCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTA      <  SRR4302545.6282072/94‑1 (MQ=60)

                                                                                         CCGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTA      <  SRR4302545.9159263/94‑1 (MQ=60)

                                                                                          CGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTAC     <  SRR4302545.986121/94‑1 (MQ=60)

                                                                                          CGGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTAC     >  SRR4302545.10267551/1‑94 (MQ=60)

                                                                                          CGGCGTGGGGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTAC     >  SRR4302545.3455295/1‑94 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    >  SRR4302545.6807543/1‑94 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    >  SRR4302545.7671678/1‑94 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    <  SRR4302545.9197793/94‑1 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    <  SRR4302545.5483745/94‑1 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    <  SRR4302545.3009277/94‑1 (MQ=60)

                                                                                           GGCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACG    >  SRR4302545.5950498/1‑94 (MQ=60)

                                                                                            GCGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGT   >  SRR4302545.2606363/1‑94 (MQ=60)

                                                                                             CGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGTG  >  SRR4302545.8165138/1‑94 (MQ=60)

                                                                                             CGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGTG  >  SRR4302545.10226314/1‑94 (MQ=60)

                                                                                             CGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGTG  <  SRR4302545.3107020/94‑1 (MQ=60)

ACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTACAGCAACTTTGTCAGCGTTCAGAACGATGATGTAATCACCGGTATCTACGTG  >  NC_000913/3375962‑3376148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`