Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,509,958 Δ1 bp intergenic (‑195/+314) yhfZ ← / ← trpS hypothetical protein/tryptophan tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,509,9560T.99.9% 2999.0 / ‑4.3 654intergenic (‑193/+316)yhfZ/trpShypothetical protein/tryptophan tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base . (254/399);  minor base A (0/1);  total (254/400)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 706 total aligned reads displayed.

ACGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC  >  NC_000913/3509863‑3510045
                                                                                             |                                                                                         
aCGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCct                                                                                           >  1:10011109/1‑94 (MQ=255)
    cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttctt                                                                                       <  2:7194989/94‑4 (MQ=255)
    cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttctt                                                                                       >  2:7046446/1‑91 (MQ=255)
     attcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttcttt                                                                                      <  2:732542/94‑5 (MQ=255)
        cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                  <  1:5630671/94‑1 (MQ=255)
        cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                  <  2:5016897/94‑1 (MQ=255)
        cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                  >  1:2790056/1‑94 (MQ=255)
        cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                  <  2:6047889/94‑1 (MQ=255)
        cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                  >  2:6724958/1‑94 (MQ=255)
         attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTg                                                                                 >  1:8278725/1‑94 (MQ=255)
         attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTg                                                                                 <  2:9431427/94‑1 (MQ=255)
         attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTg                                                                                 <  2:1281701/94‑1 (MQ=255)
           ttGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                               <  1:3465812/94‑1 (MQ=255)
             gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaa                                                                             <  1:9804277/94‑1 (MQ=255)
             gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaa                                                                             <  1:1222442/94‑1 (MQ=255)
              ccAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaaa                                                                            <  1:10225407/94‑1 (MQ=255)
               cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTTATAAAc                                                                           >  1:2235539/1‑94 (MQ=255)
               cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc                                                                           <  2:9167117/94‑1 (MQ=255)
               cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc                                                                           <  1:9674715/94‑1 (MQ=255)
                aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg                                                                          <  1:5133318/94‑1 (MQ=255)
                 gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt                                                                         <  1:5294060/94‑1 (MQ=255)
                   tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                       <  2:9252861/94‑1 (MQ=255)
                   tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                       <  1:7569240/94‑1 (MQ=255)
                    cATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCg                                                                      <  2:6677640/94‑1 (MQ=255)
                     aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGAGGACGCCTTT‑TTTTTTGATAAAAGTTTGa                                                                     >  1:4136093/1‑94 (MQ=255)
                     aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa                                                                     >  2:6851002/1‑94 (MQ=255)
                     aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGGCGTGATGACGACGCC‑ATCTTTTTTGATAAACGGTCGa                                                                     >  2:9755194/1‑94 (MQ=255)
                      tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAc                                                                    <  1:3570749/94‑1 (MQ=255)
                      tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACG‑CACTCTTTTTTGATAAACGTTCGAc                                                                    <  2:1920100/94‑1 (MQ=255)
                       cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACg                                                                   <  2:2983903/94‑1 (MQ=255)
                       cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACg                                                                   <  2:9887078/94‑1 (MQ=255)
                          tGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCat                                                                <  2:867622/94‑1 (MQ=255)
                          tGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCat                                                                <  2:875191/94‑1 (MQ=255)
                            gTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                              <  1:5502676/94‑1 (MQ=255)
                            gTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                              <  2:951204/94‑1 (MQ=255)
                              tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                            <  1:613345/94‑1 (MQ=255)
                              tttCAATCGATTACCGCACTTTGCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                            <  1:3951970/94‑1 (MQ=255)
                               ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAtaataa                                                           <  2:1068595/94‑1 (MQ=255)
                               ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAtaataa                                                           <  1:4881490/94‑1 (MQ=255)
                                 cAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAt                                                         <  2:6380530/94‑1 (MQ=255)
                                    tCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtttt                                                      >  1:741906/1‑94 (MQ=255)
                                     cGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAttttt                                                     >  1:7829470/1‑93 (MQ=255)
                                     cGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTc                                                     <  2:10526513/94‑1 (MQ=255)
                                         tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                 <  1:9260717/94‑1 (MQ=255)
                                         tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                 >  1:4556070/1‑94 (MQ=255)
                                         tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                 <  1:2980114/94‑1 (MQ=255)
                                         tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGGGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                 >  1:2641064/1‑94 (MQ=255)
                                          aCCGCACTTTTCACCCAACAAATACCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa                                                <  1:8531398/94‑1 (MQ=255)
                                          aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa                                                >  2:4463539/1‑94 (MQ=255)
                                          aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa                                                >  1:10401731/1‑94 (MQ=255)
                                          aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa                                                <  2:1478112/94‑1 (MQ=255)
                                          aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTCTTGATAAACGTTCGACGCATCATACATTTTCAGTaa                                                >  1:6064130/1‑94 (MQ=255)
                                           cctcACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaaa                                               >  2:5348786/4‑94 (MQ=255)
                                           ccGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaaa                                               <  1:6350775/94‑1 (MQ=255)
                                            cGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                              <  2:2157050/94‑1 (MQ=255)
                                            cGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                              <  1:7225283/94‑1 (MQ=255)
                                            cGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                              <  1:6633391/94‑1 (MQ=255)
                                              cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTg                                            <  2:1768962/94‑1 (MQ=255)
                                                cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGaa                                          <  2:455545/94‑1 (MQ=255)
                                                cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGaa                                          >  2:3685620/1‑94 (MQ=255)
                                                 ttttCGCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAat                                         <  2:3916227/94‑1 (MQ=255)
                                                  tttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                        >  2:5725399/1‑94 (MQ=255)
                                                  tttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                        <  1:1923174/94‑1 (MQ=255)
                                                   ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAatat                                       <  2:337986/94‑1 (MQ=255)
                                                     cACCCAACAAAGAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAttt                                     <  2:4719013/94‑1 (MQ=255)
                                                      aCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                    >  2:2493677/1‑94 (MQ=255)
                                                      aCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                    >  2:4277769/1‑94 (MQ=255)
                                                      aCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                    <  2:2342271/94‑1 (MQ=255)
                                                      aCCCAACAAATAACGGGCCAGCGGCGTGATGACGACACC‑TTCTTTTTTGATAAACGTTTGACGCATAATAAATTTTCAGTAAATTGAATAtttt                                    >  2:7660827/1‑93 (MQ=255)
                                                       cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTGGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                   <  1:691400/94‑1 (MQ=255)
                                                       cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                   >  2:2796792/1‑94 (MQ=255)
                                                        ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata                                  <  1:5879209/94‑1 (MQ=255)
                                                         caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                 <  1:3125798/94‑1 (MQ=255)
                                                         caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                 >  2:8932169/1‑94 (MQ=255)
                                                           acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCt                               <  1:7958667/94‑1 (MQ=255)
                                                            caaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt                              <  1:6776615/94‑1 (MQ=255)
                                                                aaaCGGGACAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAgg                          <  1:8086900/93‑1 (MQ=255)
                                                                 aaCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGa                         <  2:10194894/94‑1 (MQ=255)
                                                                  aCGGGCCAGCGTCGTGATGACGACGCC‑TTATTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa                        <  2:5494443/94‑1 (MQ=255)
                                                                    gggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                      <  1:8943809/94‑1 (MQ=255)
                                                                    gggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                      <  2:3165774/94‑1 (MQ=255)
                                                                     ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAttt                     <  2:6128844/94‑1 (MQ=255)
                                                                      gCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTg                    <  2:7861016/94‑1 (MQ=255)
                                                                        cAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa                  >  2:3441840/1‑94 (MQ=255)
                                                                         aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                 <  2:5207621/94‑1 (MQ=255)
                                                                         aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                 >  1:947379/1‑94 (MQ=255)
                                                                          gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGa                <  1:8424628/94‑1 (MQ=255)
                                                                           cgtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt               >  1:1561301/1‑94 (MQ=255)
                                                                            gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa              >  1:2477676/1‑94 (MQ=255)
                                                                             tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa             <  2:8362090/94‑1 (MQ=255)
                                                                             tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa             >  1:4323619/1‑94 (MQ=255)
                                                                              cgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAg            <  1:5748802/94‑1 (MQ=255)
                                                                               gtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAgg           >  1:1493364/1‑94 (MQ=255)
                                                                                tgatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc          <  1:7086636/94‑1 (MQ=255)
                                                                                 gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGACGATAAGgcg         >  2:1336012/1‑94 (MQ=255)
                                                                                   tgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCa       <  2:8116662/94‑1 (MQ=255)
                                                                                     acgactCC‑TTCTTTTTTGATAAACGATCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAAATAAGGCGCAAc     <  1:8716809/94‑1 (MQ=255)
                                                                                     acgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAc     >  2:4777481/1‑94 (MQ=255)
                                                                                       gacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg   <  1:10567191/94‑1 (MQ=255)
                                                                                        acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGc  >  1:3311682/1‑94 (MQ=255)
                                                                                             |                                                                                         
ACGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC  >  NC_000913/3509863‑3510045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 317 total aligned reads displayed.
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  NC_000913/3510028‑3510214
                                                                                              |                                                                                              
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G                                                                                                <  SRR4302545.10131253/94‑1 (MQ=60)
 AGATAAGGCGCAACAGCGAGCTGTGGAAAAGGCGAGGCACTTCACATTTTTTCGGATTATTGCAACTGAGGATAAAAAAAACGGGTTTCCCC‑G‑G                                                                                              >  SRR4302545.10421727/1‑94 (MQ=60)
 AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑G                                                                                              <  SRR4302545.6821057/94‑1 (MQ=60)
  GATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑GT                                                                                             >  SRR4302545.5243569/1‑94 (MQ=60)
  GATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑GT                                                                                             <  SRR4302545.6364395/94‑1 (MQ=60)
   ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Gggt                                                                                             >  SRR4302545.9893697/1‑91 (MQ=60)
    TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTT                                                                                            <  SRR4302545.2837226/94‑1 (MQ=60)
    TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTT                                                                                            <  SRR4302545.1791196/94‑1 (MQ=60)
    TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTT                                                                                            <  SRR4302545.1791195/94‑1 (MQ=60)
    TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTT                                                                                            <  SRR4302545.1547217/94‑1 (MQ=60)
    TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTT                                                                                            <  SRR4302545.1547211/94‑1 (MQ=60)
     AAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTC                                                                                           >  SRR4302545.5868118/1‑94 (MQ=60)
      AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCA                                                                                          >  SRR4302545.1058860/1‑94 (MQ=60)
      AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCA                                                                                          <  SRR4302545.4488565/94‑1 (MQ=60)
       GGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAG                                                                                         >  SRR4302545.5431772/1‑94 (MQ=60)
         CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAG                                                                                       >  SRR4302545.3272444/1‑94 (MQ=60)
         CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAG                                                                                       <  SRR4302545.3466971/94‑1 (MQ=60)
         CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAG                                                                                       <  SRR4302545.10023348/94‑1 (MQ=60)
         CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAG                                                                                       >  SRR4302545.5349321/1‑94 (MQ=60)
         CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAG                                                                                       <  SRR4302545.7723262/94‑1 (MQ=60)
          GCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGT                                                                                      >  SRR4302545.5900885/1‑94 (MQ=60)
           CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG                                                                                     <  SRR4302545.7946966/94‑1 (MQ=60)
           CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG                                                                                     >  SRR4302545.3414768/1‑94 (MQ=60)
           CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG                                                                                     <  SRR4302545.10435438/94‑1 (MQ=60)
            AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA                                                                                    >  SRR4302545.3314345/1‑94 (MQ=60)
               AGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCCGG‑TTTCAGAGGGGTGA                                                                                 >  SRR4302545.4698606/1‑94 (MQ=60)
               AGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCAGGCTTCCCCGG‑TTTCAGAGTGATGA                                                                                 >  SRR4302545.706622/1‑94 (MQ=60)
                GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGAT                                                                                <  SRR4302545.5790746/94‑1 (MQ=60)
                GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGAT                                                                                <  SRR4302545.4753014/94‑1 (MQ=60)
                GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGAT                                                                                <  SRR4302545.1347200/94‑1 (MQ=60)
                GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGAT                                                                                >  SRR4302545.8928697/1‑94 (MQ=60)
                 CGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTTCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATA                                                                               >  SRR4302545.8755867/1‑94 (MQ=60)
                 CGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATA                                                                               <  SRR4302545.3211631/94‑1 (MQ=60)
                 CGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATA                                                                               <  SRR4302545.4701989/94‑1 (MQ=60)
                 CGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATA                                                                               >  SRR4302545.5074794/1‑94 (MQ=60)
                  GAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAA                                                                              >  SRR4302545.8953531/1‑94 (MQ=60)
                  GAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAA                                                                              >  SRR4302545.1166464/1‑94 (MQ=60)
                  GAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAA                                                                              <  SRR4302545.10002410/94‑1 (MQ=60)
                   AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAA                                                                             >  SRR4302545.3703348/1‑94 (MQ=60)
                   AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGCGATGATAAA                                                                             >  SRR4302545.3703349/1‑94 (MQ=60)
                    GATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAA                                                                            <  SRR4302545.5209987/94‑1 (MQ=60)
                        TGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAA                                                                        >  SRR4302545.10906713/1‑94 (MQ=60)
                         GGAAGCGGCGAGGCACTTCTCATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAACGTGATAATAAAAGCAAA                                                                       <  SRR4302545.9680171/94‑1 (MQ=60)
                          GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAA                                                                      >  SRR4302545.586379/1‑94 (MQ=60)
                          GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAA                                                                      >  SRR4302545.4739512/1‑94 (MQ=60)
                           AAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAAT                                                                     <  SRR4302545.10622391/94‑1 (MQ=60)
                           AAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAAT                                                                     >  SRR4302545.6435224/1‑94 (MQ=60)
                           AAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAAT                                                                     <  SRR4302545.396095/94‑1 (MQ=60)
                           AAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAAT                                                                     <  SRR4302545.3050587/94‑1 (MQ=60)
                            AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGGTGATAAAAGCAAAATT                                                                    <  SRR4302545.4687050/94‑1 (MQ=60)
                            AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATT                                                                    >  SRR4302545.8335952/1‑94 (MQ=60)
                            AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATT                                                                    <  SRR4302545.630125/94‑1 (MQ=60)
                             ACGGCGAGGCACTTCACGTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTG                                                                   <  SRR4302545.3894412/94‑1 (MQ=60)
                             ACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTG                                                                   <  SRR4302545.2864416/94‑1 (MQ=60)
                               GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCC                                                                 <  SRR4302545.9447616/94‑1 (MQ=60)
                                GCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCT                                                                >  SRR4302545.10839840/1‑94 (MQ=60)
                                GCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCT                                                                <  SRR4302545.566622/94‑1 (MQ=60)
                                GCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCT                                                                <  SRR4302545.7359977/94‑1 (MQ=60)
                                 CGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTG                                                               >  SRR4302545.5215502/1‑94 (MQ=60)
                                 CGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTG                                                               >  SRR4302545.7851817/1‑94 (MQ=60)
                                  GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGA                                                              >  SRR4302545.6549754/1‑94 (MQ=60)
                                  GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGA                                                              >  SRR4302545.6549755/1‑94 (MQ=60)
                                  GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACAGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGA                                                              >  SRR4302545.7296766/1‑94 (MQ=60)
                                   AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             <  SRR4302545.6758927/94‑1 (MQ=60)
                                   AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             >  SRR4302545.10636350/1‑94 (MQ=60)
                                   AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             >  SRR4302545.2441444/1‑94 (MQ=60)
                                    GGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATG                                                            >  SRR4302545.4149477/1‑94 (MQ=60)
                                      CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG                                                          <  SRR4302545.10920905/94‑1 (MQ=60)
                                      CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG                                                          <  SRR4302545.9168017/94‑1 (MQ=60)
                                      CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG                                                          >  SRR4302545.9811357/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.5729039/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.8499452/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.3143227/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.4057243/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.10034330/1‑94 (MQ=60)
                                       ACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGC                                                         >  SRR4302545.9909194/1‑94 (MQ=60)
                                        CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT                                                        <  SRR4302545.1894626/94‑1 (MQ=60)
                                        CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT                                                        >  SRR4302545.5210604/1‑94 (MQ=60)
                                         TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATCAAAGCAAAATTGCCTGATGAGCTA                                                       >  SRR4302545.3924320/1‑94 (MQ=60)
                                         TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA                                                       <  SRR4302545.8132104/94‑1 (MQ=60)
                                         TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA                                                       <  SRR4302545.8248004/94‑1 (MQ=60)
                                         TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA                                                       <  SRR4302545.9046750/94‑1 (MQ=60)
                                          TCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAC                                                      <  SRR4302545.6173566/94‑1 (MQ=60)
                                          TCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAC                                                      >  SRR4302545.8589772/1‑94 (MQ=60)
                                           CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG                                                     >  SRR4302545.5150774/1‑94 (MQ=60)
                                            ACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGC                                                    >  SRR4302545.4859455/1‑94 (MQ=60)
                                             CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT                                                   >  SRR4302545.9107032/1‑94 (MQ=60)
                                              ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAGAGCAAAATTGCCTGATGCGCTACGCTT                                                  <  SRR4302545.2628451/94‑1 (MQ=60)
                                              ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTT                                                  >  SRR4302545.5430158/1‑94 (MQ=60)
                                               TTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTA                                                 >  SRR4302545.3149393/1‑94 (MQ=60)
                                                TTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTAT                                                >  SRR4302545.589358/1‑94 (MQ=60)
                                                TTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTAT                                                <  SRR4302545.931501/94‑1 (MQ=60)
                                                 TTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATC                                               >  SRR4302545.7997850/1‑94 (MQ=60)
                                                  TTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCA                                              <  SRR4302545.5176245/94‑1 (MQ=60)
                                                  TTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCA                                              <  SRR4302545.3301900/94‑1 (MQ=60)
                                                   TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             <  SRR4302545.8764737/94‑1 (MQ=60)
                                                   TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             >  SRR4302545.495151/1‑94 (MQ=60)
                                                    TCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGGTTATCAGG                                            >  SRR4302545.7745039/1‑94 (MQ=60)
                                                     CGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGC                                           <  SRR4302545.6821700/94‑1 (MQ=60)
                                                      GGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCC                                          >  SRR4302545.6377052/1‑94 (MQ=60)
                                                      GGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCC                                          <  SRR4302545.1313430/94‑1 (MQ=60)
                                                      GGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCC                                          >  SRR4302545.789847/1‑94 (MQ=60)
                                                       GATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT                                         <  SRR4302545.5639223/94‑1 (MQ=60)
                                                       GATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT                                         <  SRR4302545.2530467/94‑1 (MQ=60)
                                                        ATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA                                        <  SRR4302545.9488930/94‑1 (MQ=60)
                                                        ATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA                                        <  SRR4302545.9488933/94‑1 (MQ=60)
                                                         TTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAC                                       >  SRR4302545.8637495/1‑94 (MQ=60)
                                                          TATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA                                      <  SRR4302545.2171103/94‑1 (MQ=60)
                                                           ATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     >  SRR4302545.2244782/1‑94 (MQ=60)
                                                           ATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     >  SRR4302545.4600565/1‑94 (MQ=60)
                                                           ATTACAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAAGCGCTACGCTTATCAGGCCTACAT                                     >  SRR4302545.7410116/1‑94 (MQ=60)
                                                             TGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT                                   <  SRR4302545.877572/94‑1 (MQ=60)
                                                             TGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT                                   >  SRR4302545.10310233/1‑94 (MQ=60)
                                                             TGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT                                   <  SRR4302545.1627433/94‑1 (MQ=60)
                                                             TGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCACTACGCTTATCAGGCCTACATTT                                   >  SRR4302545.5966975/1‑94 (MQ=60)
                                                              GCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGGTACGCTTATCAGGCCTACATTTC                                  <  SRR4302545.6908586/94‑1 (MQ=60)
                                                              GCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC                                  >  SRR4302545.2657546/1‑94 (MQ=60)
                                                              GCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC                                  >  SRR4302545.4418471/1‑94 (MQ=60)
                                                              GCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC                                  <  SRR4302545.2337246/94‑1 (MQ=60)
                                                               CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCT                                 >  SRR4302545.3076473/1‑94 (MQ=60)
                                                               CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 <  SRR4302545.7393548/94‑1 (MQ=60)
                                                               CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 <  SRR4302545.5879007/94‑1 (MQ=60)
                                                               CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302545.492818/1‑94 (MQ=60)
                                                                AAATGATGATAAAAAAGCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                <  SRR4302545.2458421/94‑1 (MQ=60)
                                                                AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                <  SRR4302545.8655758/94‑1 (MQ=60)
                                                                AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                >  SRR4302545.202506/1‑94 (MQ=60)
                                                                AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                <  SRR4302545.7509667/94‑1 (MQ=60)
                                                                AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                >  SRR4302545.9832486/1‑94 (MQ=60)
                                                                 AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               <  SRR4302545.6251998/94‑1 (MQ=60)
                                                                 AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               >  SRR4302545.10589036/1‑94 (MQ=60)
                                                                 AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               >  SRR4302545.10548243/1‑94 (MQ=60)
                                                                 AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               >  SRR4302545.3865567/1‑94 (MQ=60)
                                                                  ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              <  SRR4302545.9191902/94‑1 (MQ=60)
                                                                  ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              >  SRR4302545.4339040/1‑94 (MQ=60)
                                                                  ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              >  SRR4302545.5034765/1‑94 (MQ=60)
                                                                  ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              <  SRR4302545.1184174/94‑1 (MQ=60)
                                                                   TGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGC                             <  SRR4302545.5766802/94‑1 (MQ=60)
                                                                   TGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGC                             <  SRR4302545.10194398/94‑1 (MQ=60)
                                                                   TGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGC                             >  SRR4302545.8776976/1‑94 (MQ=60)
                                                                   TGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGC                             >  SRR4302545.2594279/1‑94 (MQ=60)
                                                                    GAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCA                            >  SRR4302545.2142731/1‑94 (MQ=60)
                                                                      GGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAT                          <  SRR4302545.4924429/94‑1 (MQ=60)
                                                                        ATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGGCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        >  SRR4302545.10178637/1‑94 (MQ=60)
                                                                        ATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        >  SRR4302545.989171/1‑94 (MQ=60)
                                                                        ATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        <  SRR4302545.2842884/94‑1 (MQ=60)
                                                                        ATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        >  SRR4302545.4769947/1‑94 (MQ=60)
                                                                         TAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG                       <  SRR4302545.3855768/94‑1 (MQ=60)
                                                                         TAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG                       >  SRR4302545.3543125/1‑94 (MQ=60)
                                                                          AAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT                      <  SRR4302545.7140087/94‑1 (MQ=60)
                                                                          AAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT                      >  SRR4302545.114481/1‑94 (MQ=60)
                                                                           AAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG                     >  SRR4302545.4871640/1‑94 (MQ=60)
                                                                           AAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG                     <  SRR4302545.8250261/94‑1 (MQ=60)
                                                                           AAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG                     >  SRR4302545.6727981/1‑94 (MQ=60)
                                                                            AAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC                    <  SRR4302545.7027391/94‑1 (MQ=60)
                                                                            AAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC                    >  SRR4302545.5104911/1‑94 (MQ=60)
                                                                            AAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC                    >  SRR4302545.8190163/1‑94 (MQ=60)
                                                                             AAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA                   >  SRR4302545.8778262/1‑94 (MQ=60)
                                                                              AAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAT                  >  SRR4302545.254018/1‑94 (MQ=60)
                                                                               AACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATT                 <  SRR4302545.7525830/94‑1 (MQ=60)
                                                                               AACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATT                 <  SRR4302545.1053701/94‑1 (MQ=60)
                                                                               AACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAGATGTGGATT                 <  SRR4302545.6651791/94‑1 (MQ=60)
                                                                                ACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTA                >  SRR4302545.6967364/1‑94 (MQ=60)
                                                                                 CCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAC               >  SRR4302545.8018933/1‑94 (MQ=60)
                                                                                  CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              >  SRR4302545.4983835/1‑94 (MQ=60)
                                                                                  CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              <  SRR4302545.5710932/94‑1 (MQ=60)
                                                                                  CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              >  SRR4302545.5615568/1‑94 (MQ=60)
                                                                                  CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              >  SRR4302545.6198005/1‑94 (MQ=60)
                                                                                  CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              >  SRR4302545.9029789/1‑94 (MQ=60)
                                                                                   GGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT             >  SRR4302545.6322259/1‑94 (MQ=60)
                                                                                   GGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT             <  SRR4302545.9276419/94‑1 (MQ=60)
                                                                                    GGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT            <  SRR4302545.7235929/94‑1 (MQ=60)
                                                                                      TTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT          >  SRR4302545.2548091/1‑94 (MQ=60)
                                                                                      TTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT          <  SRR4302545.5017226/94‑1 (MQ=60)
                                                                                      TTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT          <  SRR4302545.10267704/94‑1 (MQ=60)
                                                                                      TTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT          <  SRR4302545.6026769/94‑1 (MQ=60)
                                                                                      TTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGT          >  SRR4302545.5101581/1‑94 (MQ=60)
                                                                                       TTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA         <  SRR4302545.9342740/94‑1 (MQ=60)
                                                                                       TTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA         <  SRR4302545.5596664/94‑1 (MQ=60)
                                                                                       TTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA         >  SRR4302545.4783241/1‑94 (MQ=60)
                                                                                       TTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTA         <  SRR4302545.5596663/94‑1 (MQ=60)
                                                                                        TCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302545.1484769/94‑1 (MQ=60)
                                                                                        TCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302545.925741/94‑1 (MQ=60)
                                                                                        TCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302545.4266742/94‑1 (MQ=60)
                                                                                        TCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302545.1903650/94‑1 (MQ=60)
                                                                                        TCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302545.8161457/94‑1 (MQ=60)
                                                                                         CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302545.5242445/1‑94 (MQ=60)
                                                                                         CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302545.1451975/1‑94 (MQ=60)
                                                                                         CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302545.4534054/1‑94 (MQ=60)
                                                                                         CCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG       <  SRR4302545.2969416/94‑1 (MQ=60)
                                                                                         CCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTACTTGCAATATGTGCATTACTTTGTAGG       >  SRR4302545.6404381/1‑94 (MQ=60)
                                                                                          CCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCC     >  SRR4302545.7118771/1‑94 (MQ=60)
                                                                                          CCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAAGCC     >  SRR4302545.9329167/1‑94 (MQ=60)
                                                                                          CCC‑GTTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      <  SRR4302545.2752312/94‑1 (MQ=60)
                                                                                           CG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG    >  SRR4302545.3241756/1‑94 (MQ=60)
                                                                                           CG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG    >  SRR4302545.9445093/1‑94 (MQ=60)
                                                                                           CG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG    >  SRR4302545.685668/1‑94 (MQ=60)
                                                                                            G‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG   <  SRR4302545.10546102/94‑1 (MQ=60)
                                                                                            G‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG   >  SRR4302545.7315118/1‑94 (MQ=60)
                                                                                            G‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG   >  SRR4302545.1030510/1‑94 (MQ=60)
                                                                                              G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  SRR4302545.6387023/1‑94 (MQ=60)
                                                                                              |                                                                                              
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  NC_000913/3510028‑3510214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑