Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,510,121 +G intergenic (‑358/+151) yhfZ ← / ← trpS hypothetical protein/tryptophan tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,510,1201.G96.6% 802.5 / 17.4 237intergenic (‑357/+152)yhfZ/trpShypothetical protein/tryptophan tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base . (3/5);  new base G (126/103);  total (129/108)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.61e-01

Only 100 of 266 total aligned reads displayed.

AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG  >  NC_000913/3510028‑3510209
                                                                                             |                                                                                         
 aGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑g                                                                                          <  2:2310023/93‑1 (MQ=255)
  gATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑gg                                                                                         >  1:358249/1‑92 (MQ=255)
    tAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtt                                                                                       >  1:5829892/1‑93 (MQ=255)
     aaGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggttt                                                                                      <  1:480421/93‑2 (MQ=255)
      aGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑Ggtttc                                                                                     <  1:1380116/93‑3 (MQ=255)
       ggCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCa                                                                                     <  1:5793359/93‑1 (MQ=255)
        gcgcAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCag                                                                                    <  2:2870296/93‑1 (MQ=255)
          gcAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCagag                                                                                  >  2:2083524/1‑93 (MQ=255)
          gcAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCagag                                                                                  <  2:5337005/93‑1 (MQ=255)
           cAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGt                                                                                 <  1:3913356/93‑1 (MQ=255)
           cAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGt                                                                                 <  1:1284261/93‑1 (MQ=255)
             aCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtga                                                                               >  2:1558789/1‑93 (MQ=255)
             aCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtga                                                                               >  2:6228525/1‑93 (MQ=255)
              cAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgat                                                                              <  2:5524459/93‑1 (MQ=255)
              cAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgat                                                                              <  1:5692936/93‑1 (MQ=255)
              cAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgat                                                                              >  1:6445168/1‑93 (MQ=255)
               aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgatg                                                                             >  2:796604/1‑93 (MQ=255)
                gCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGtgatga                                                                            >  2:419281/1‑93 (MQ=255)
                  gagaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATa                                                                          >  2:2965754/1‑93 (MQ=255)
                  gagaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATa                                                                          >  2:5149345/1‑93 (MQ=255)
                    gaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATaaa                                                                        >  1:5125524/1‑93 (MQ=255)
                       gtgGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGc                                                                     <  1:6310676/93‑1 (MQ=255)
                       gtgGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGc                                                                     <  1:2360284/93‑1 (MQ=255)
                          gAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGCATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaaa                                                                  <  1:5952886/93‑1 (MQ=255)
                           aaaCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCaaaa                                                                 <  2:5629516/93‑1 (MQ=255)
                              cGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTg                                                              <  1:6006306/93‑1 (MQ=255)
                              cGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTg                                                              <  1:2310400/93‑1 (MQ=255)
                              cGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTg                                                              <  1:1538551/93‑1 (MQ=255)
                               ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGc                                                             <  2:4543250/93‑1 (MQ=255)
                               ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGGTTCAGAGTGATGATAAAAGCAAAATTGc                                                             >  2:5693251/1‑93 (MQ=255)
                                gCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGcc                                                            >  2:2801196/1‑93 (MQ=255)
                                  gAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTg                                                          >  2:3292792/1‑93 (MQ=255)
                                   aGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGa                                                         >  2:5492784/1‑93 (MQ=255)
                                    ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt                                                        >  1:3539134/1‑93 (MQ=255)
                                    ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt                                                        <  2:3625395/93‑1 (MQ=255)
                                      cACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc                                                      >  2:4588902/1‑93 (MQ=255)
                                      cACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc                                                      >  1:495984/1‑93 (MQ=255)
                                      cACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgc                                                      >  1:30070/1‑93 (MQ=255)
                                        cTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATggga                                                    >  2:1148101/1‑90 (MQ=255)
                                         ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt                                                   >  1:2888387/1‑93 (MQ=255)
                                          tCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTa                                                  >  2:5047054/1‑93 (MQ=255)
                                           cacaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAc                                                 <  1:5526294/93‑1 (MQ=255)
                                           cacaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAc                                                 <  1:5641386/93‑1 (MQ=255)
                                           cacaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAc                                                 >  1:2847060/1‑93 (MQ=255)
                                            acaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACg                                                >  2:1649924/1‑93 (MQ=255)
                                             caTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGc                                               >  1:6193162/1‑93 (MQ=255)
                                              aTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGATTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCt                                              >  2:2661492/1‑93 (MQ=255)
                                              aTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCt                                              >  1:2534183/1‑93 (MQ=255)
                                              aTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCt                                              >  2:2236183/1‑93 (MQ=255)
                                               ttttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCtt                                             <  1:1263141/93‑1 (MQ=255)
                                               ttttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCtt                                             <  1:3254005/93‑1 (MQ=255)
                                               ttttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCtt                                             >  2:2823328/1‑93 (MQ=255)
                                                tttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTa                                            >  2:6021061/1‑93 (MQ=255)
                                                  tttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATc                                          >  1:4284330/1‑93 (MQ=255)
                                                  tttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATc                                          >  2:3008115/1‑93 (MQ=255)
                                                    tCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAg                                        >  2:3135955/1‑93 (MQ=255)
                                                     cGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAgg                                       >  2:4091189/1‑93 (MQ=255)
                                                      ggATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGc                                      >  2:5981145/1‑93 (MQ=255)
                                                         ttattGCTAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                   >  2:6363478/1‑93 (MQ=255)
                                                         ttattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                   >  1:3097303/1‑93 (MQ=255)
                                                          tattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                  <  1:1559826/93‑1 (MQ=255)
                                                           attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa                                 >  2:662560/1‑93 (MQ=255)
                                                           attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa                                 >  1:3287815/1‑93 (MQ=255)
                                                           attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa                                 >  2:4039697/1‑93 (MQ=255)
                                                           attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa                                 >  1:5732108/1‑93 (MQ=255)
                                                            ttGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAt                                >  1:4442747/1‑93 (MQ=255)
                                                             tGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAtt                               <  1:29484/93‑1 (MQ=255)
                                                             tGCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAtt                               >  2:3650393/1‑93 (MQ=255)
                                                              gCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGTACGATACGATACGATTATTACGTCTACAttt                              >  1:3427746/1‑93 (MQ=255)
                                                              gCAAATGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAttt                              >  2:4339166/1‑93 (MQ=255)
                                                               gaaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTc                             <  1:157974/92‑1 (MQ=255)
                                                                aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTcc                            >  1:3669179/1‑93 (MQ=255)
                                                                aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTcc                            >  1:812774/1‑93 (MQ=255)
                                                                aaaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCACTACGCTTATCAGGCCTACATTTcc                            <  1:1622904/93‑1 (MQ=255)
                                                                 aaTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCt                           >  1:4174966/1‑93 (MQ=255)
                                                                  aTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt                          >  1:3984171/1‑93 (MQ=255)
                                                                  aTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt                          <  2:513417/93‑1 (MQ=255)
                                                                  aTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt                          <  1:5251207/93‑1 (MQ=255)
                                                                  aTGAGGATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt                          >  2:3223671/1‑93 (MQ=255)
                                                                      ggATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCaa                      >  2:5788745/1‑93 (MQ=255)
                                                                        aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata                    <  1:4998048/93‑1 (MQ=255)
                                                                        aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata                    <  2:1864398/93‑1 (MQ=255)
                                                                         tAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAatat                   <  2:4140527/93‑1 (MQ=255)
                                                                          aaaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtg                  >  1:1825735/1‑93 (MQ=255)
                                                                          aaaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtg                  >  1:262218/1‑93 (MQ=255)
                                                                           aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt                 <  2:3508995/93‑1 (MQ=255)
                                                                           aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt                 <  1:1786403/93‑1 (MQ=255)
                                                                            aaaaaCCGGGTTTCCCCGGTGTCAGATTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgtg                <  1:5356355/93‑1 (MQ=25)
                                                                             aaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGc               >  1:1884590/1‑93 (MQ=255)
                                                                              aaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa              <  1:2833326/93‑1 (MQ=255)
                                                                               aaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt             <  2:4290550/93‑1 (MQ=255)
                                                                               aaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt             >  2:4732752/1‑93 (MQ=255)
                                                                                aCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtt            <  2:5899294/93‑1 (MQ=255)
                                                                                  cGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAc          <  1:2224930/93‑1 (MQ=255)
                                                                                   gggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACt         >  1:4618446/1‑93 (MQ=255)
                                                                                   gggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACt         <  1:2007712/93‑1 (MQ=255)
                                                                                    ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt        >  1:1954788/1‑93 (MQ=255)
                                                                                    ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt        <  1:3740690/93‑1 (MQ=255)
                                                                                      ttccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGt     <  2:106002/90‑1 (MQ=255)
                                                                                        ccccg‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg   <  1:1223919/92‑1 (MQ=255)
                                                                                             |                                                                                         
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG  >  NC_000913/3510028‑3510209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  NC_000913/3510029‑3510214
                                                                                              |                                                                                             
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GG                                                                                              >  SRR4302537.360739/1‑94 (MQ=60)
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GG                                                                                              <  SRR4302537.3619302/94‑1 (MQ=60)
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GG                                                                                              <  SRR4302537.3075547/94‑1 (MQ=60)
 GATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GGT                                                                                             >  SRR4302537.5641598/1‑94 (MQ=60)
  ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑Ggat                                                                                            >  SRR4302537.3019345/1‑91 (MQ=60)
  ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GGTT                                                                                            >  SRR4302537.5869851/1‑94 (MQ=60)
  ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GGTT                                                                                            <  SRR4302537.5629207/94‑1 (MQ=60)
    AAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTC                                                                                           <  SRR4302537.483714/94‑1 (MQ=60)
     AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCA                                                                                          >  SRR4302537.5746482/1‑94 (MQ=60)
     AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCA                                                                                          <  SRR4302537.1389746/94‑1 (MQ=60)
      GGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAG                                                                                         <  SRR4302537.5833074/94‑1 (MQ=60)
        CGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAG                                                                                       <  SRR4302537.5158820/94‑1 (MQ=60)
         GCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGT                                                                                      <  SRR4302537.5895026/94‑1 (MQ=60)
          CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTG                                                                                     <  SRR4302537.3940714/94‑1 (MQ=60)
          CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTG                                                                                     <  SRR4302537.1293194/94‑1 (MQ=60)
          CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTG                                                                                     <  SRR4302537.5733257/94‑1 (MQ=60)
           AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGA                                                                                    >  SRR4302537.1279158/1‑94 (MQ=60)
           AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTT‑CCCCGGTTTCAGAGTGA                                                                                    >  SRR4302537.1949319/1‑94 (MQ=60)
            ACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGAT                                                                                   >  SRR4302537.6488892/1‑94 (MQ=60)
            ACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGAT                                                                                   <  SRR4302537.1424646/94‑1 (MQ=60)
             CAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATG                                                                                  >  SRR4302537.4220562/1‑94 (MQ=60)
             CAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATG                                                                                  <  SRR4302537.5731873/94‑1 (MQ=60)
              AGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGA                                                                                 >  SRR4302537.5212743/1‑94 (MQ=60)
               GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGAT                                                                                <  SRR4302537.3753053/94‑1 (MQ=60)
               GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGAT                                                                                <  SRR4302537.44609/94‑1 (MQ=60)
               GCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGAT                                                                                >  SRR4302537.2864145/1‑94 (MQ=60)
                  AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAA                                                                             >  SRR4302537.5307001/1‑94 (MQ=60)
                  AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAA                                                                             >  SRR4302537.5160846/1‑94 (MQ=60)
                   GATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAA                                                                            <  SRR4302537.4712874/94‑1 (MQ=60)
                    ATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAG                                                                           >  SRR4302537.5548508/1‑94 (MQ=60)
                     TGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGC                                                                          <  SRR4302537.2567813/94‑1 (MQ=60)
                      GTGGGAACTGCTAGGCAGTTCACGTTTCTTCGGATGATTGCAAATGAGGATAAAAAAACCGTGTTC‑CCCCGGTTTCAGAGTGATGATAAAAGCA                                                                         <  SRR4302537.5570484/94‑1 (MQ=42)
                      GTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCA                                                                         <  SRR4302537.6353881/94‑1 (MQ=60)
                      GTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCA                                                                         <  SRR4302537.2376935/94‑1 (MQ=60)
                        GGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAA                                                                       >  SRR4302537.3614806/1‑94 (MQ=60)
                         GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGCATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAA                                                                      <  SRR4302537.5993755/94‑1 (MQ=60)
                          AAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAAT                                                                     >  SRR4302537.2325796/1‑94 (MQ=60)
                           AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATT                                                                    <  SRR4302537.233107/94‑1 (MQ=60)
                           AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATT                                                                    <  SRR4302537.800157/94‑1 (MQ=60)
                            ACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTG                                                                   <  SRR4302537.1658436/94‑1 (MQ=60)
                            ACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTG                                                                   <  SRR4302537.2915809/94‑1 (MQ=60)
                             CGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGC                                                                  <  SRR4302537.2326708/94‑1 (MQ=60)
                             CGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGC                                                                  <  SRR4302537.6047569/94‑1 (MQ=60)
                             CGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGC                                                                  <  SRR4302537.1549292/94‑1 (MQ=60)
                              GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCC                                                                 <  SRR4302537.4208364/94‑1 (MQ=60)
                                CGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTG                                                               <  SRR4302537.1843483/94‑1 (MQ=60)
                                 GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGA                                                              >  SRR4302537.5447650/1‑94 (MQ=60)
                                  AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             >  SRR4302537.3564129/1‑94 (MQ=60)
                                  AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             >  SRR4302537.3862643/1‑94 (MQ=60)
                                  AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             <  SRR4302537.4908782/94‑1 (MQ=60)
                                  AGACACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT                                                             <  SRR4302537.2891290/94‑1 (MQ=60)
                                    GCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGC                                                           <  SRR4302537.6023622/94‑1 (MQ=60)
                                    GCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGC                                                           >  SRR4302537.30311/1‑94 (MQ=60)
                                    GCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGC                                                           >  SRR4302537.499397/1‑94 (MQ=60)
                                     CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG                                                          <  SRR4302537.1280740/94‑1 (MQ=60)
                                     CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG                                                          >  SRR4302537.6258142/1‑94 (MQ=60)
                                       CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT                                                        <  SRR4302537.1738175/94‑1 (MQ=60)
                                       CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT                                                        >  SRR4302537.2908659/1‑94 (MQ=60)
                                        TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA                                                       >  SRR4302537.4941519/1‑94 (MQ=60)
                                        TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA                                                       <  SRR4302537.2170209/94‑1 (MQ=60)
                                         TCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAC                                                      >  SRR4302537.2866993/1‑94 (MQ=60)
                                         TCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAC                                                      >  SRR4302537.1962337/1‑94 (MQ=60)
                                          CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG                                                     <  SRR4302537.5679994/94‑1 (MQ=60)
                                          CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG                                                     >  SRR4302537.1255531/1‑94 (MQ=60)
                                          CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG                                                     >  SRR4302537.4995656/1‑94 (MQ=60)
                                          CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG                                                     <  SRR4302537.5564014/94‑1 (MQ=60)
                                           ACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGC                                                    >  SRR4302537.3291921/1‑94 (MQ=60)
                                           ACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGC                                                    >  SRR4302537.6235833/1‑94 (MQ=60)
                                            CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT                                                   >  SRR4302537.162783/1‑94 (MQ=60)
                                            CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT                                                   >  SRR4302537.5190762/1‑94 (MQ=60)
                                            CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT                                                   >  SRR4302537.2551967/1‑94 (MQ=60)
                                              TTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTA                                                 <  SRR4302537.3276952/94‑1 (MQ=60)
                                              TTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTA                                                 <  SRR4302537.1271926/94‑1 (MQ=60)
                                                TTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATC                                               >  SRR4302537.4314114/1‑94 (MQ=60)
                                                  TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGTGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             <  SRR4302537.3490108/94‑1 (MQ=60)
                                                  TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             <  SRR4302537.1594903/94‑1 (MQ=60)
                                                  TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             >  SRR4302537.1810907/1‑94 (MQ=60)
                                                  TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG                                             <  SRR4302537.6164423/94‑1 (MQ=60)
                                                     GGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCC                                          >  SRR4302537.3985149/1‑94 (MQ=60)
                                                      GATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT                                         <  SRR4302537.3961304/94‑1 (MQ=60)
                                                      GATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT                                         >  SRR4302537.1491865/1‑94 (MQ=60)
                                                       ATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA                                        >  SRR4302537.5977097/1‑94 (MQ=60)
                                                       ATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA                                        >  SRR4302537.3118918/1‑94 (MQ=60)
                                                       ATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA                                        >  SRR4302537.4643795/1‑94 (MQ=60)
                                                        TTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAC                                       >  SRR4302537.3335249/1‑94 (MQ=60)
                                                         TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA                                      >  SRR4302537.5771348/1‑94 (MQ=60)
                                                         TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA                                      >  SRR4302537.3311052/1‑94 (MQ=60)
                                                         TATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACA                                      <  SRR4302537.1570713/94‑1 (MQ=60)
                                                          ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     <  SRR4302537.1562842/94‑1 (MQ=60)
                                                          ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     <  SRR4302537.2998740/94‑1 (MQ=60)
                                                          ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     >  SRR4302537.4473432/1‑94 (MQ=60)
                                                          ATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT                                     <  SRR4302537.158020/94‑1 (MQ=60)
                                                            TGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGtacgatacgatacgattattacgtctacattt                                   >  SRR4302537.3452006/1‑62 (MQ=60)
                                                            TGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT                                   >  SRR4302537.4133196/1‑94 (MQ=60)
                                                            TGCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT                                   <  SRR4302537.29722/94‑1 (MQ=60)
                                                             GCAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTC                                  <  SRR4302537.2856307/94‑1 (MQ=60)
                                                              GAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 <  SRR4302537.159096/94‑1 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302537.818343/1‑94 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 <  SRR4302537.2886339/94‑1 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302537.5056306/1‑94 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302537.3694997/1‑94 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302537.5714962/1‑94 (MQ=60)
                                                              CAAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC                                 >  SRR4302537.2633048/1‑94 (MQ=60)
                                                               AAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                >  SRR4302537.3573263/1‑94 (MQ=60)
                                                               AAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                <  SRR4302537.2379574/94‑1 (MQ=60)
                                                               AAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT                                >  SRR4302537.4204115/1‑94 (MQ=60)
                                                               AAATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCACTACGCTTATCAGGCCTACATTTCCT                                <  SRR4302537.1634257/94‑1 (MQ=60)
                                                                AATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               >  SRR4302537.3292061/1‑94 (MQ=60)
                                                                AATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               >  SRR4302537.4012067/1‑94 (MQ=60)
                                                                AATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT                               <  SRR4302537.2094497/94‑1 (MQ=60)
                                                                 ATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              <  SRR4302537.3111576/94‑1 (MQ=60)
                                                                 ATGAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG                              <  SRR4302537.5287342/94‑1 (MQ=60)
                                                                   GAGGATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCA                            <  SRR4302537.3243419/94‑1 (MQ=60)
                                                                   GAGGATAAAAAAACCGGGTCT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCA                            <  SRR4302537.1981829/94‑1 (MQ=60)
                                                                      GATAAAAAAACCGGGTTTGCCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATA                         >  SRR4302537.2674973/1‑94 (MQ=60)
                                                                      GATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATA                         <  SRR4302537.802073/94‑1 (MQ=60)
                                                                       ATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        <  SRR4302537.5032487/94‑1 (MQ=60)
                                                                       ATAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT                        <  SRR4302537.381453/94‑1 (MQ=60)
                                                                        TAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG                       >  SRR4302537.4728128/1‑94 (MQ=60)
                                                                        TAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG                       >  SRR4302537.264069/1‑94 (MQ=60)
                                                                        TAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG                       >  SRR4302537.1838459/1‑94 (MQ=60)
                                                                        TAAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTCATCAGGCCTACATTTCCTTGCAATATG                       <  SRR4302537.6446589/94‑1 (MQ=60)
                                                                         AAAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGT                      <  SRR4302537.1893998/94‑1 (MQ=60)
                                                                          AAAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTG                     <  SRR4302537.1798862/94‑1 (MQ=60)
                                                                           AAAAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC                    >  SRR4302537.1897697/1‑94 (MQ=60)
                                                                           AAAAACCGGGTTT‑CCCCGGTGTCAGATTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC                    <  SRR4302537.5393043/94‑1 (MQ=60)
                                                                             AAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAT                  <  SRR4302537.3576035/94‑1 (MQ=60)
                                                                             AAACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAT                  <  SRR4302537.2853137/94‑1 (MQ=60)
                                                                              AACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATT                 <  SRR4302537.1554640/94‑1 (MQ=60)
                                                                              AACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATT                 >  SRR4302537.6243981/1‑94 (MQ=60)
                                                                               ACCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTA                <  SRR4302537.5793626/94‑1 (MQ=60)
                                                                                CCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAC               >  SRR4302537.248813/1‑94 (MQ=60)
                                                                                CCGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAC               <  SRR4302537.586424/94‑1 (MQ=60)
                                                                                 CGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              <  SRR4302537.2240603/94‑1 (MQ=60)
                                                                                 CGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT              >  SRR4302537.4650432/1‑94 (MQ=60)
                                                                                 CGGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACTTCCTTGCACTATGTGCCTTACT              >  SRR4302537.3343016/1‑94 (MQ=60)
                                                                                  GGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT             <  SRR4302537.2021706/94‑1 (MQ=60)
                                                                                  GGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT             >  SRR4302537.5826833/1‑94 (MQ=60)
                                                                                  GGGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT             >  SRR4302537.1968383/1‑94 (MQ=60)
                                                                                   GGTTT‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT            <  SRR4302537.3766963/94‑1 (MQ=60)
                                                                                       T‑CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAG        <  SRR4302537.6016362/94‑1 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.5977852/1‑94 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.420346/1‑94 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.4275781/1‑94 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.4394689/1‑94 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      <  SRR4302537.443885/94‑1 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.4606615/1‑94 (MQ=60)
                                                                                         CCCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC      >  SRR4302537.6496172/1‑94 (MQ=60)
                                                                                         CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG       <  SRR4302537.976899/94‑1 (MQ=60)
                                                                                         CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG       <  SRR4302537.2318481/94‑1 (MQ=60)
                                                                                         CCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG       <  SRR4302537.1232425/94‑1 (MQ=60)
                                                                                          CCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCC     <  SRR4302537.5518631/94‑1 (MQ=60)
                                                                                          CCG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCC     >  SRR4302537.5080700/1‑94 (MQ=60)
                                                                                           CG‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG    <  SRR4302537.1040467/94‑1 (MQ=60)
                                                                                            G‑GTTTCAGAGTGATGATAAAAGCAAAATTTCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG   >  SRR4302537.3313485/1‑94 (MQ=60)
                                                                                            G‑GTTTCAGAGTGAGGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG   >  SRR4302537.3511360/1‑94 (MQ=60)
                                                                                              GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  SRR4302537.5056812/1‑94 (MQ=60)
                                                                                              GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  <  SRR4302537.3889704/94‑1 (MQ=60)
                                                                                              |                                                                                             
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTT‑CCCC‑GTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA  >  NC_000913/3510029‑3510214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑