Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,575,446 +G coding (912/942 nt) gntR ← GntR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,575,4451.G99.8% 2135.9 / NA 615C305R (TGC→CGC) gntRGntR
Reads supporting (aligned to +/- strand):  ref base . (1/0);  major base G (318/295);  minor base T (1/0);  total (320/295)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 677 total aligned reads displayed.

AATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCG  >  NC_000913/3575352‑3575533
                                                                                               |                                                                                        
 aTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagcag                                                                                         >  2:301164/1‑94 (MQ=255)
  tttGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagcagg                                                                                        >  1:1478684/1‑93 (MQ=255)
  tttGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagcagg                                                                                        >  2:6515430/1‑93 (MQ=255)
    tgtgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAATATTTTCGGTGTCACAGATTCGCCACGAATACGCGCcagcaggcg                                                                                      >  2:1306767/1‑91 (MQ=255)
        ggCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCa                                                                                   >  2:10005736/1‑94 (MQ=255)
           ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcg                                                                                <  1:5990889/94‑1 (MQ=255)
           ttAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcg                                                                                <  1:4326115/94‑1 (MQ=255)
            tAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcgc                                                                               >  2:1807614/1‑94 (MQ=255)
            tAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcgc                                                                               >  1:2684656/1‑94 (MQ=255)
             aaaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAAGCGTTCAgcgtc                                                                              >  1:10230797/1‑92 (MQ=255)
             aaaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGcc                                                                              >  1:822056/1‑94 (MQ=255)
              aaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCa                                                                             >  2:7402969/1‑94 (MQ=255)
              aaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTATCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCa                                                                             >  2:637184/1‑94 (MQ=255)
               aTAGATCCGCCCGCTGACAAGGTGAAGCATAAATCTAACATGTGCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCTaa                                                                            <  2:5686778/94‑1 (MQ=255)
                tAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAAt                                                                           <  1:9054201/94‑1 (MQ=255)
                 aGATCCGGCCGGTGACAAGGTGAAACCTAAATCTAACGTTGTCGGTGTCACCGATTCGCCAGGAATACGCGCCAGCAGGCGTTCAGCGCCAATa                                                                          <  2:2817119/94‑1 (MQ=255)
                   aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACt                                                                        <  1:10074510/94‑1 (MQ=255)
                    tCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTg                                                                       <  2:10411838/94‑1 (MQ=255)
                    accccccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTg                                                                       <  2:315664/90‑1 (MQ=255)
                       gCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGccc                                                                    <  1:2228340/94‑1 (MQ=255)
                       gCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGccc                                                                    >  2:6966483/1‑94 (MQ=255)
                        cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCa                                                                   >  2:7108236/1‑94 (MQ=255)
                         ccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCAt                                                                  <  2:9301856/94‑1 (MQ=255)
                          cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATc                                                                 >  2:9137744/1‑94 (MQ=255)
                          cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATc                                                                 >  1:7529773/1‑94 (MQ=255)
                           ggTGACGAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATcc                                                                <  1:8710516/94‑1 (MQ=255)
                            gTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCg                                                               <  2:1532252/94‑1 (MQ=255)
                            gTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCg                                                               <  2:10162318/94‑1 (MQ=255)
                             tGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGc                                                              >  1:9222495/1‑94 (MQ=255)
                                 aaGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc                                                          <  2:9878511/94‑1 (MQ=255)
                                 aaGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc                                                          >  2:5849784/1‑94 (MQ=255)
                                 aaGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc                                                          <  2:8847362/94‑1 (MQ=255)
                                 aaGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc                                                          >  1:3593842/1‑94 (MQ=255)
                                  aGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg                                                         >  1:6929951/1‑94 (MQ=255)
                                  aGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg                                                         <  2:1077684/94‑1 (MQ=255)
                                   ggTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgc                                                        <  1:9322150/94‑1 (MQ=255)
                                    gTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgcg                                                       <  2:9627612/94‑1 (MQ=255)
                                    gTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgcg                                                       <  2:5211333/94‑1 (MQ=255)
                                     tGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcgg                                                      >  2:2643846/1‑94 (MQ=255)
                                     tGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcgg                                                      >  2:8327986/1‑94 (MQ=255)
                                     tGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcgg                                                      >  2:760895/1‑94 (MQ=255)
                                       aaaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcggcg                                                    <  1:8125493/94‑1 (MQ=255)
                                        aaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGt                                                   <  1:1774221/94‑1 (MQ=255)
                                        aaCCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGt                                                   >  1:3778337/1‑94 (MQ=255)
                                          ccTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                 >  2:8122604/1‑94 (MQ=255)
                                          ccTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                 <  1:2593102/94‑1 (MQ=255)
                                          ccTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa                                                 >  1:8626992/1‑94 (MQ=255)
                                           cTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAg                                                <  1:7742884/94‑1 (MQ=255)
                                            tAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGc                                               <  2:8939422/94‑1 (MQ=255)
                                            tAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGc                                               <  1:2993313/94‑1 (MQ=255)
                                            tAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCATCCGCTCACGCGGCGgcagca                                              >  1:6429652/1‑94 (MQ=255)
                                             aaaTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa                                              >  2:8457095/1‑94 (MQ=255)
                                             aaaTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa                                              >  1:6296163/1‑94 (MQ=255)
                                              aaTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCAc                                             >  1:5011771/1‑94 (MQ=255)
                                              aaTCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCAc                                             <  1:2346633/94‑1 (MQ=255)
                                                tCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCCCGc                                           >  1:4468924/1‑94 (MQ=255)
                                                  tAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTc                                         <  1:10590806/94‑1 (MQ=255)
                                                   aaCATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg                                        <  2:1976576/94‑1 (MQ=255)
                                                   aaCATTTTCGGTGTCACAGATTAGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg                                        >  1:6767643/1‑94 (MQ=255)
                                                    aCATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCATGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGc                                       >  1:3455295/1‑94 (MQ=255)
                                                    aCATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGc                                       >  1:9829748/1‑94 (MQ=255)
                                                     cATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCa                                      <  2:6599429/94‑1 (MQ=255)
                                                     cATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCa                                      >  1:6173130/1‑94 (MQ=255)
                                                      aTTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCaa                                     >  2:3583547/1‑94 (MQ=255)
                                                      aTTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCaa                                     <  1:8387010/94‑1 (MQ=255)
                                                       ttttCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAg                                    >  2:7313595/1‑94 (MQ=255)
                                                       ttttCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAg                                    <  1:535765/94‑1 (MQ=255)
                                                       ttttCGGTGTCCAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGt                                   <  2:7885576/94‑1 (MQ=255)
                                                        tttCGGGGTCACAGATTCGCCACGAATACGAGCCAGCAGGCGTTCAGCGCCCATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGt                                   >  1:668917/1‑94 (MQ=255)
                                                         ttCGGTGTCACAGATTCGCCACGAATGCGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTc                                  <  1:3238754/94‑1 (MQ=255)
                                                              tgtCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGc                             >  1:4092896/1‑94 (MQ=255)
                                                              tgtCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGc                             >  2:4244893/1‑94 (MQ=255)
                                                                 cacaGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTcc                          >  1:7187742/1‑94 (MQ=255)
                                                                  acaGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCa                         <  1:6588028/94‑1 (MQ=255)
                                                                   caGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCAt                        <  1:2057445/94‑1 (MQ=255)
                                                                    aGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATc                       >  2:3980254/1‑94 (MQ=255)
                                                                    aGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATc                       >  1:7044793/1‑94 (MQ=255)
                                                                      aTTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCTCAAGTCGTGGCTCCATCAc                     >  2:9189874/1‑94 (MQ=255)
                                                                      aTTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc                     >  2:8596097/1‑94 (MQ=255)
                                                                      aTTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc                     >  2:4920122/1‑94 (MQ=255)
                                                                       ttCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAcc                    <  1:1156788/94‑1 (MQ=255)
                                                                       ttCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAcc                    <  2:2247441/94‑1 (MQ=255)
                                                                           ccACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAc                >  1:10435174/1‑94 (MQ=255)
                                                                             aCGAATACGCGCCAGCAGGCGTTCAGCGGCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTTCATCACCTGACCa              <  2:3453269/94‑1 (MQ=255)
                                                                             aCGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCa              <  1:9484209/94‑1 (MQ=255)
                                                                             aCGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCa              <  1:1347685/94‑1 (MQ=255)
                                                                             aCGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCa              <  1:3943483/94‑1 (MQ=255)
                                                                               gAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAAt            >  1:4658929/1‑94 (MQ=255)
                                                                                aaTACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATg           <  2:5071155/94‑1 (MQ=255)
                                                                                 aTACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGt          <  1:4923726/94‑1 (MQ=255)
                                                                                 aTACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGt          >  2:4097477/1‑94 (MQ=255)
                                                                                  tACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTc         <  1:1572566/94‑1 (MQ=255)
                                                                                  tACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTc         <  1:7641606/94‑1 (MQ=255)
                                                                                    cgcgCCAGCAGGCGTTGAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt       <  2:6111030/94‑1 (MQ=255)
                                                                                    cgcgCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCCATGTCAt       >  1:574100/1‑94 (MQ=255)
                                                                                      cgcCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGa     >  2:3299060/1‑94 (MQ=255)
                                                                                       gcCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGAc    >  2:4506830/1‑94 (MQ=255)
                                                                                        ccAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGAcc   >  1:1182727/1‑94 (MQ=255)
                                                                                        ccAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGAcc   <  2:1408061/94‑1 (MQ=255)
                                                                                        ccAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAAAGTCATGAcc   >  2:5592867/1‑94 (MQ=255)
                                                                                               |                                                                                        
AATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCG  >  NC_000913/3575352‑3575533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 334 total aligned reads displayed.
AACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCA  >  NC_000913/3588067‑3588253
                                                                                             |                                                                                             
AACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGG                                                                                               <  SRR4302545.4298103/94‑1 (MQ=60)
AAAATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGG                                                                                               >  SRR4302545.9156382/1‑94 (MQ=60)
 ACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGA                                                                                              <  SRR4302545.10143517/94‑1 (MQ=60)
  CATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAG                                                                                             <  SRR4302545.10323059/94‑1 (MQ=60)
   ATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGA                                                                                            >  SRR4302545.6571515/1‑94 (MQ=60)
    TTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGAT                                                                                           <  SRR4302545.10643494/94‑1 (MQ=60)
     TGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATC                                                                                          <  SRR4302545.2047531/94‑1 (MQ=60)
     TGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATC                                                                                          >  SRR4302545.10527243/1‑94 (MQ=60)
      GCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCC                                                                                         <  SRR4302545.10364639/94‑1 (MQ=60)
       CCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCA                                                                                        <  SRR4302545.9584444/94‑1 (MQ=60)
         TGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCTAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACA                                                                                      <  SRR4302545.6317773/94‑1 (MQ=60)
         TGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGAACAGCCCGCGACCGGGGTTAAACAGGGAGATCCACA                                                                                      <  SRR4302545.8281401/94‑1 (MQ=60)
          GACCGCTGTTTTGTGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGTTAATGGGCGATCAGCCCGCGTCCGGGGTTAAACAAGAAGATCCACAA                                                                                     >  SRR4302545.6997613/1‑94 (MQ=60)
           ACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAAT                                                                                    >  SRR4302545.2583409/1‑94 (MQ=60)
            CCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATA                                                                                   <  SRR4302545.8759563/94‑1 (MQ=60)
            CCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATA                                                                                   <  SRR4302545.273546/94‑1 (MQ=60)
            CCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATA                                                                                   <  SRR4302545.9867939/94‑1 (MQ=60)
            CCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATA                                                                                   >  SRR4302545.6329946/1‑94 (MQ=60)
              GCTTTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGTTTAATCAGGGATATCCATAATACG                                                                                 >  SRR4302545.9661561/1‑94 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 <  SRR4302545.2686787/94‑1 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 <  SRR4302545.43028/94‑1 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 >  SRR4302545.497847/1‑94 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 >  SRR4302545.3876393/1‑94 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 >  SRR4302545.3140696/1‑94 (MQ=60)
              GCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACG                                                                                 <  SRR4302545.7665820/94‑1 (MQ=60)
               CTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGG                                                                                <  SRR4302545.5026467/94‑1 (MQ=60)
               CTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGG                                                                                >  SRR4302545.4748265/1‑94 (MQ=60)
               CTGTTTTGCGCGTGGCTCCAGTCGCAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGCCCGGGGTTAAACAGGGACATCCACAATACGG                                                                                >  SRR4302545.9841125/1‑94 (MQ=60)
                TGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGC                                                                               <  SRR4302545.9896629/94‑1 (MQ=60)
                TGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGC                                                                               >  SRR4302545.4593890/1‑94 (MQ=60)
                 GTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGATATCCACAATACGGCG                                                                              <  SRR4302545.213689/94‑1 (MQ=60)
                 GTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCG                                                                              <  SRR4302545.4400811/94‑1 (MQ=60)
                  TTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGG                                                                             >  SRR4302545.5964914/1‑94 (MQ=60)
                  TTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGG                                                                             <  SRR4302545.6657672/94‑1 (MQ=60)
                  TTTTGCGCGTGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACCGCGGA                                                                            >  SRR4302545.8431834/1‑94 (MQ=60)
                   TTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGC                                                                            >  SRR4302545.7023752/1‑94 (MQ=60)
                    TTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAATCAGGGAGATCCCCAATACGGCGGCA                                                                           <  SRR4302545.6664146/94‑1 (MQ=60)
                    TTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCA                                                                           <  SRR4302545.4010788/94‑1 (MQ=60)
                    TTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCA                                                                           <  SRR4302545.8573948/94‑1 (MQ=60)
                     TGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAA                                                                          >  SRR4302545.4933153/1‑94 (MQ=60)
                     TGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAA                                                                          <  SRR4302545.4882164/94‑1 (MQ=60)
                      GCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAAC                                                                         >  SRR4302545.753513/1‑94 (MQ=60)
                       GGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACG                                                                        <  SRR4302545.9320200/94‑1 (MQ=60)
                       CGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACG                                                                        <  SRR4302545.552635/94‑1 (MQ=60)
                       CGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACG                                                                        <  SRR4302545.2509498/94‑1 (MQ=60)
                       CGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACG                                                                        >  SRR4302545.1636368/1‑94 (MQ=60)
                        GCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGG                                                                       <  SRR4302545.10399785/94‑1 (MQ=60)
                        GCGTGGTTCCAGCCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCTGCGACCGGGGTTAAACAGGGAGATCAACAATACGGCGGacaagg                                                                       >  SRR4302545.3280532/1‑88 (MQ=60)
                         CGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGC                                                                      <  SRR4302545.825648/94‑1 (MQ=60)
                          GTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCG                                                                     >  SRR4302545.7878032/1‑94 (MQ=60)
                          GTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCG                                                                     >  SRR4302545.2445220/1‑94 (MQ=60)
                           TGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGG                                                                    >  SRR4302545.6269727/1‑94 (MQ=60)
                           TGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGG                                                                    <  SRR4302545.3206266/94‑1 (MQ=60)
                           TGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGG                                                                    <  SRR4302545.1860616/94‑1 (MQ=60)
                           TGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGG                                                                    >  SRR4302545.8518524/1‑94 (MQ=60)
                             GTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGG                                                                  >  SRR4302545.1986055/1‑94 (MQ=60)
                             GTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGA                                                                  <  SRR4302545.3479073/94‑1 (MQ=60)
                             GTTCCAGTCGTAGCCGAACTACGCGAGAAAATGGGTGATCAGCACGCGACCGGGGTTAAACAGGGAGATACACAATACGGCGGCAACGGCGGcg                                                                  >  SRR4302545.4831356/1‑92 (MQ=60)
                              TTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGCG                                                                 >  SRR4302545.6590941/1‑94 (MQ=60)
                               TCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGC                                                                >  SRR4302545.6759278/1‑94 (MQ=60)
                                CCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCC                                                               <  SRR4302545.795010/94‑1 (MQ=60)
                                CCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCC                                                               <  SRR4302545.9323857/94‑1 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGtgcga                                                              >  SRR4302545.6516699/1‑89 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGggccc                                                              >  SRR4302545.3016937/1‑89 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCA                                                              >  SRR4302545.9178653/1‑94 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCA                                                              <  SRR4302545.661294/94‑1 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCA                                                              <  SRR4302545.4127992/94‑1 (MQ=60)
                                 CAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCA                                                              <  SRR4302545.7885833/94‑1 (MQ=60)
                                  AGTCGTAGCCGACCTCCGCGAGAAAGTGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCAC                                                             <  SRR4302545.436843/94‑1 (MQ=60)
                                   GTCGTAGCCGACCTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACG                                                            <  SRR4302545.1581795/94‑1 (MQ=60)
                                   GTCGTAGCCGACCTACGCGAGAAAATGGGTGATCAGCCGGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACG                                                            <  SRR4302545.1581794/94‑1 (MQ=60)
                                   GTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACG                                                            >  SRR4302545.10340324/1‑94 (MQ=60)
                                    TCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACCATACGGCGGCAACGGCGGGggccccag                                                           >  SRR4302545.4594760/1‑86 (MQ=60)
                                    TCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGG                                                           <  SRR4302545.6056150/94‑1 (MQ=60)
                                    TCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGG                                                           >  SRR4302545.2314315/1‑94 (MQ=60)
                                    TCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGG                                                           <  SRR4302545.7736603/94‑1 (MQ=60)
                                    GCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGG                                                           <  SRR4302545.4910383/94‑1 (MQ=60)
                                     CGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGC                                                          <  SRR4302545.6375709/94‑1 (MQ=60)
                                     CGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGC                                                          <  SRR4302545.9861866/94‑1 (MQ=60)
                                      GTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcccggcg                                                         >  SRR4302545.6723185/1‑84 (MQ=60)
                                      ATAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCG                                                         <  SRR4302545.7139583/94‑1 (MQ=60)
                                       TAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcccggcgg                                                        >  SRR4302545.613518/1‑83 (MQ=60)
                                       TAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcacggggg                                                        >  SRR4302545.673504/1‑83 (MQ=60)
                                       TAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGT                                                        <  SRR4302545.2402364/94‑1 (MQ=60)
                                       TAGCCGAACGCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGT                                                        <  SRR4302545.6153612/94‑1 (MQ=60)
                                        AGCCGACCTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGAGCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTA                                                       <  SRR4302545.4469423/94‑1 (MQ=60)
                                         GCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAA                                                      <  SRR4302545.4707092/94‑1 (MQ=60)
                                          CCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAG                                                     <  SRR4302545.1111165/94‑1 (MQ=60)
                                          CCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAG                                                     <  SRR4302545.1111164/94‑1 (MQ=60)
                                           CGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAATAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACcgcggatgg                                                    >  SRR4302545.9680499/1‑85 (MQ=60)
                                           CGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGggccccggcggaggg                                                    >  SRR4302545.3121726/1‑79 (MQ=60)
                                           CGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGGCCCGGCGGAAGG                                                    >  SRR4302545.5417562/1‑94 (MQ=60)
                                            GAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggccccgcggaaggc                                                   >  SRR4302545.3329026/1‑78 (MQ=60)
                                            GAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGC                                                   <  SRR4302545.8835388/94‑1 (MQ=60)
                                            GAACTCCGCGAGAAAATGGGCGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGggcccgcgggacaggg                                                   >  SRR4302545.3787409/1‑78 (MQ=60)
                                             AACTCCGCGAGAAAATGGGTGATCAGCCTGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCA                                                  <  SRR4302545.7730152/94‑1 (MQ=60)
                                             AACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGGAAGGCG                                                  >  SRR4302545.7976731/1‑94 (MQ=60)
                                             AACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGGAAGGCA                                                  >  SRR4302545.10252630/1‑94 (MQ=60)
                                             AACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGGCCCGGGGTAAGGCA                                                  >  SRR4302545.7633228/1‑94 (MQ=60)
                                              ACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGGCACGGCGGAAGGGAG                                                 >  SRR4302545.4368629/1‑94 (MQ=60)
                                              ACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAG                                                 <  SRR4302545.8011803/94‑1 (MQ=60)
                                              ACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAG                                                 <  SRR4302545.3067592/94‑1 (MQ=60)
                                               CTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCCACGGCGGGAAGCCCCGCGTAAGGCAGC                                                >  SRR4302545.1188299/1‑94 (MQ=60)
                                               CTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcccggggtaaaggcga                                                >  SRR4302545.2896568/1‑75 (MQ=60)
                                               CTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGcgccgcggcgctaagcagc                                                >  SRR4302545.4736764/1‑75 (MQ=60)
                                               CTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGGCACGGgggaaaggagc                                                >  SRR4302545.4455064/1‑83 (MQ=60)
                                               CTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGC                                                <  SRR4302545.9417691/94‑1 (MQ=60)
                                                 CCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCCCGGCGGAAGGGAGCAA                                              >  SRR4302545.8418018/1‑94 (MQ=60)
                                                 CCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAA                                              <  SRR4302545.1776219/94‑1 (MQ=60)
                                                 CCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAA                                              <  SRR4302545.10148421/94‑1 (MQ=60)
                                                  CGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGTGAGGGAGCAAC                                             >  SRR4302545.3351287/1‑94 (MQ=60)
                                                  CGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAAC                                             <  SRR4302545.3516405/94‑1 (MQ=60)
                                                    CGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcacgggggaagggaggaacaa                                           >  SRR4302545.2180999/1‑70 (MQ=60)
                                                    CGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCCCCGCGGAAGGCAGCAACAT                                           >  SRR4302545.7976378/1‑94 (MQ=60)
                                                    CGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACAT                                           >  SRR4302545.1805592/1‑94 (MQ=60)
                                                     GAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATT                                          <  SRR4302545.4122197/94‑1 (MQ=60)
                                                      AGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCCCGGCGTAAGGCAGCCACATTA                                         >  SRR4302545.2107009/1‑94 (MQ=60)
                                                      AGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTA                                         <  SRR4302545.9424378/94‑1 (MQ=60)
                                                      AGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTA                                         <  SRR4302545.368056/94‑1 (MQ=60)
                                                       GAAATTTGGTGATCAGCCCGCGACAGAAGTTAAACATGGAGATCCACAATACGGCGCCATCGGCGGGAGCTGCGGCGTAAGGCAGCAACATTAA                                        <  SRR4302545.7802642/94‑1 (MQ=38)
                                                       GAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGGAAGGCAGCAACAATAA                                        >  SRR4302545.4559748/1‑94 (MQ=60)
                                                        AAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAG                                       <  SRR4302545.1753547/94‑1 (MQ=60)
                                                         AAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCCCCGCGTAAGGCACCCACATTTAGG                                      >  SRR4302545.10592975/1‑94 (MQ=60)
                                                          AATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGT                                     <  SRR4302545.578598/94‑1 (MQ=60)
                                                            TGGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTT                                   <  SRR4302545.10822105/94‑1 (MQ=60)
                                                             GGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGGCCCGGCGGAAGGGAGCAACATTAAAGTTTT                                  >  SRR4302545.9014542/1‑94 (MQ=60)
                                                             GGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTG                                  <  SRR4302545.1967883/94‑1 (MQ=60)
                                                             GGGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGGAAGGCAGCAAAATTAAGGTTTG                                  >  SRR4302545.1264565/1‑94 (MQ=60)
                                                              GGTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGA                                 <  SRR4302545.1735076/94‑1 (MQ=60)
                                                               GTGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCCTAAGGCAacaaccataacgcttgct                                >  SRR4302545.3916874/1‑76 (MQ=60)
                                                                TGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCCACATTAAGGGTTGATA                               >  SRR4302545.5938377/1‑94 (MQ=60)
                                                                TGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATA                               <  SRR4302545.6444592/94‑1 (MQ=60)
                                                                TGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATA                               <  SRR4302545.6444593/94‑1 (MQ=60)
                                                                TGATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTGATA                               >  SRR4302545.5752668/1‑94 (MQ=60)
                                                                TGATCAGCCCGCGACCGGGATTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATA                               <  SRR4302545.5345652/94‑1 (MQ=60)
                                                                TGATCAGCCCGCGACCAGGGCTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGgggcacggcgcaaagccgccacattatggtattata                               >  SRR4302545.10402919/1‑58 (MQ=60)
                                                                 GATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGTCGGGAGCCACCGCGTAAGGCAGCAACATTAAGGTTTGATAG                              <  SRR4302545.6705202/94‑1 (MQ=60)
                                                                 GATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGGAAGGCAGCAACATTAAGGTTTGATAA                              >  SRR4302545.5518557/1‑94 (MQ=60)
                                                                  ATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACGGCGTAAGGCAGACACATTAAGGATTGATAGA                             >  SRR4302545.2433360/1‑94 (MQ=60)
                                                                  ATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGA                             <  SRR4302545.9483481/94‑1 (MQ=60)
                                                                  ATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGA                             <  SRR4302545.7266173/94‑1 (MQ=60)
                                                                  ATCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGA                             <  SRR4302545.1387438/94‑1 (MQ=60)
                                                                   TCAGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAA                            <  SRR4302545.5211318/94‑1 (MQ=60)
                                                                    CAGCCCGCGACCGTGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATTGAAA                           <  SRR4302545.3689450/94‑1 (MQ=60)
                                                                     AGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGgaaaggcgttacgtagcaacattttagtatgttataaaa                          >  SRR4302545.4070977/1‑55 (MQ=60)
                                                                     AGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGGGTAAAGCCGCAACATTCAGGGTTTATAGAAAA                          >  SRR4302545.10050613/1‑94 (MQ=60)
                                                                     AGCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAAC                          <  SRR4302545.9114037/94‑1 (MQ=60)
                                                                      GCCCGCGAGCGGGCGTGAACAGGGAGATCCACAATACGGCGGCAACGGCTGGGGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACT                         <  SRR4302545.8397266/94‑1 (MQ=60)
                                                                      GCCCGCGACCGGGGTTAAACAGGGAGATCCACAATCCGGCGGCAAGGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACG                         <  SRR4302545.10747498/94‑1 (MQ=60)
                                                                      GCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACG                         <  SRR4302545.10010045/94‑1 (MQ=60)
                                                                      GCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACG                         <  SRR4302545.9713435/94‑1 (MQ=60)
                                                                      GCCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACG                         <  SRR4302545.5697650/94‑1 (MQ=60)
                                                                       CCCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGGCACGGGGGAAGGCAGGCACATTAAGGTTTtgttgaaaagg                        >  SRR4302545.8580415/1‑83 (MQ=57)
                                                                        CCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGggccgcggcgggaggcggcgaggttgagggttgaatgataaagc                       >  SRR4302545.9878536/1‑50 (MQ=60)
                                                                        CCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGC                       >  SRR4302545.10541879/1‑94 (MQ=60)
                                                                        CCGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAAAATTAAGGGTTGATAGAAACGGG                       >  SRR4302545.3190504/1‑94 (MQ=60)
                                                                         CGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCT                      <  SRR4302545.3762523/94‑1 (MQ=60)
                                                                         CGCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACAATAAAGTTTTATAGAAACGGCT                      >  SRR4302545.10605805/1‑94 (MQ=60)
                                                                          GCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGTGTCACGCACTAAGGCTGCAACATTAAGGGTTGATAGAAAAGACTG                     >  SRR4302545.7392479/1‑94 (MQ=50)
                                                                          GCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTG                     <  SRR4302545.8911969/94‑1 (MQ=60)
                                                                          GCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTG                     <  SRR4302545.749987/94‑1 (MQ=60)
                                                                          GCGACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTG                     <  SRR4302545.6652232/94‑1 (MQ=60)
                                                                            TACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGGCACGGCGTAAGGCAGCAACATTAAGGgtttataaaaaagggggcc                   >  SRR4302545.2477268/1‑75 (MQ=60)
                                                                            GACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCGACGGCGGGAGCCCCGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAAAGGCTGGC                   >  SRR4302545.6982359/1‑94 (MQ=60)
                                                                            GACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGggtaaagcgggcacatttagggtttatagaaacagagggc                   >  SRR4302545.2000834/1‑54 (MQ=60)
                                                                            GACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTAATAGAAAAGGCTGGC                   >  SRR4302545.312641/1‑94 (MQ=60)
                                                                             ACCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACCGCTGGCG                  >  SRR4302545.3436585/1‑94 (MQ=60)
                                                                              CCGGGGTTAACCAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGC                 <  SRR4302545.6199410/94‑1 (MQ=60)
                                                                              CCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGC                 <  SRR4302545.1951207/94‑1 (MQ=60)
                                                                              CCGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCGTAAGGCAGCAACATTAAGGGTTGATAGAAAacggtttcgc                 >  SRR4302545.5258873/1‑84 (MQ=60)
                                                                               CGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCG                <  SRR4302545.173552/94‑1 (MQ=60)
                                                                               CGGGGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCG                <  SRR4302545.6270058/94‑1 (MQ=60)
                                                                                  GGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCAC             <  SRR4302545.97026/94‑1 (MQ=60)
                                                                                  GGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCAC             <  SRR4302545.9358816/94‑1 (MQ=60)
                                                                                  GGTTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAAGGTTGATAGAAAAGGCTGCCGCGCAC             >  SRR4302545.132460/1‑94 (MQ=60)
                                                                                    TTAAACATGGAGATCCACAATACGGCGGCAACGGCGGGAGCCCCGGCGTAAAGCAGCAAacttaagggtttataaaaacggctggccggcacga           >  SRR4302545.4359512/1‑59 (MQ=49)
                                                                                    TTAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAAAGGCTGCCGCGCACGA           >  SRR4302545.8831372/1‑94 (MQ=60)
                                                                                     TAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGAT          <  SRR4302545.5940785/94‑1 (MQ=60)
                                                                                     TAAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGAT          <  SRR4302545.8347253/94‑1 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGGGCCACCGCGTAAAGCAGCAACATTAAGGGTTGATAGAAACGGCTGCCcggcaccatg         >  SRR4302545.2229120/1‑84 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCCCGGCGTAAGGCAACAACCTTAAGGTTTGATtgaaaagggtgctgcgctcggtg         >  SRR4302545.8422301/1‑71 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCCAGGCGTAAGGCAGCAATATTAAGGGTTGATAGAAACGGgtgtcgcggaagatg         >  SRR4302545.10014729/1‑79 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATG         <  SRR4302545.10738619/94‑1 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATG         <  SRR4302545.304527/94‑1 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTGATAGAAAAAGCTGCCGCGCACGgag         >  SRR4302545.1020817/1‑91 (MQ=60)
                                                                                      AAACAGGGAGATCCACAATACGGCGGAAACGGCGGGAGCCACGGCGTAAAGCAGCAACATTAAGGGTTGATAGAAACGGCTGGCGCGCACGATG         >  SRR4302545.6623177/1‑94 (MQ=60)
                                                                                       AACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGT        <  SRR4302545.5859672/94‑1 (MQ=60)
                                                                                       AACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTGATAGAAACGGCTGCCGCGCACGATGT        >  SRR4302545.423924/1‑94 (MQ=60)
                                                                                       AACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACCGCGTAAGGCAGCAACATTAAGGGTTGATAGAAACGGCTGCCCGGCACGATGT        >  SRR4302545.2264168/1‑94 (MQ=60)
                                                                                        ACAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTGATAGAAACGGCTGGCGCGCACGATGTA       >  SRR4302545.921661/1‑94 (MQ=60)
                                                                                         CAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTAC      >  SRR4302545.3617451/1‑94 (MQ=60)
                                                                                         CAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTAC      <  SRR4302545.6633168/94‑1 (MQ=60)
                                                                                         CAGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGGTTGATAGAAAACGCTGCCGCGCACGATGTAC      >  SRR4302545.7123569/1‑94 (MQ=60)
                                                                                          AGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCCCGGCGTAAGGCAGCAACATTAAGGGTTGATAGAAACGGCTGCCGCGCCCGAAGTACT     >  SRR4302545.4730541/1‑94 (MQ=60)
                                                                                          AGGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGGTGCCGCGCACGATGTACT     >  SRR4302545.9019376/1‑94 (MQ=60)
                                                                                           GGGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTC    <  SRR4302545.7093252/94‑1 (MQ=60)
                                                                                            GGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTGAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCC   <  SRR4302545.8437693/94‑1 (MQ=60)
                                                                                            GGAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCC   <  SRR4302545.3199333/94‑1 (MQ=60)
                                                                                            GGAGATCCACAATACGGCGGCAACGGCGGGAGCCACAGCGCAAAGCAGCAACATTAATGGTTGATAAAAACGGgcgtcgcgcaccgtgtgatcc   >  SRR4302545.10707287/1‑73 (MQ=45)
                                                                                             GAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCA  <  SRR4302545.3801522/94‑1 (MQ=60)
                                                                                             |                                                                                             
AACATTGCCTGACCGCTGTTTTGCGCGTGGTTCCAGTCGTAGCCGAACTCCGCGAGAAAATGGGTGATCAGCCCGCGACCGGGGTTAAACAGGAAGATCCACAATACGGCGGCAACGGCGGGAGCCACGGCGTAAGGCAGCAACATTAAGGTTTGATAGAAACGGCTGCCGCGCACGATGTACTCCA  >  NC_000913/3588067‑3588253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: