Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,602,257 A→G A78A (GCA→GCG)  yhhF → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,602,2570AG99.4% 2244.7 / ‑0.2 662A78A (GCA→GCG) yhhFhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (338/318);  total (341/321)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.04e-01

Only 100 of 682 total aligned reads displayed.

CTCCGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCAACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACAGC  >  NC_000913/3602166‑3602347
                                                                                           |                                                                                          
 tCCGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACg                                                                                         <  2:7673689/94‑1 (MQ=255)
   cGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGtt                                                                                       <  1:8946881/94‑1 (MQ=255)
    ggTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttg                                                                                      >  2:1838024/1‑94 (MQ=255)
      tCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttgat                                                                                    >  1:4569369/1‑94 (MQ=255)
      tCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttgat                                                                                    <  2:8256010/94‑1 (MQ=255)
        aTTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttgattg                                                                                  >  2:9883858/1‑94 (MQ=255)
        aTTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttgattg                                                                                  >  1:7222987/1‑94 (MQ=255)
        aTTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATAGCGCTACGCTGCGGGGGCGACGttgattg                                                                                  >  2:3266526/1‑94 (MQ=255)
         ttgttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGttgattga                                                                                 <  1:6580091/94‑1 (MQ=255)
         ttgttgACACCCAATATCTAGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCAGGGGCGACGttgaataa                                                                                 <  1:9406149/94‑5 (MQ=255)
           gttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTgaga                                                                               >  2:6165372/1‑94 (MQ=255)
           gttgACGCCCAATGTCTGGATGGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGGCGTTGATTgaga                                                                               <  1:1063770/94‑1 (MQ=255)
            ttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGAt                                                                              <  1:9271543/94‑1 (MQ=255)
            ttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGAt                                                                              >  2:10078738/1‑94 (MQ=255)
            ttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGAt                                                                              <  1:6258919/94‑1 (MQ=255)
            ttgACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGAt                                                                              >  2:9522607/1‑94 (MQ=255)
                 gCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATc                                                                         <  1:2298359/94‑1 (MQ=255)
                 gCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATc                                                                         <  2:484810/94‑1 (MQ=255)
                  cccAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcg                                                                        <  2:7947374/94‑1 (MQ=255)
                  cccAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcg                                                                        >  2:4675826/1‑94 (MQ=255)
                   ccAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgc                                                                       >  1:10187065/1‑94 (MQ=255)
                    cAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcg                                                                      >  2:9229827/1‑94 (MQ=255)
                    cAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcg                                                                      >  1:50335/1‑94 (MQ=255)
                    cAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcg                                                                      <  2:5193788/94‑1 (MQ=255)
                     aaTGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcgc                                                                     <  1:3546972/94‑1 (MQ=255)
                     aaTGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcgc                                                                     >  1:3753698/1‑94 (MQ=255)
                      aTGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcgcg                                                                    >  1:807534/1‑94 (MQ=255)
                      aTGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATcgcgcg                                                                    >  2:9738375/1‑94 (MQ=255)
                       tGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCgg                                                                   >  1:6842802/1‑94 (MQ=255)
                       tGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCgg                                                                   <  2:11047/94‑1 (MQ=255)
                       tGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCgg                                                                   >  2:5623050/1‑94 (MQ=255)
                        gTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGt                                                                  >  1:7730735/1‑94 (MQ=255)
                         tCTGGATTTCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGtt                                                                 <  1:8395260/94‑1 (MQ=255)
                         tCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGtt                                                                 >  1:1130136/1‑94 (MQ=255)
                          cTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGttt                                                                >  1:7849973/1‑94 (MQ=255)
                          cTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGCTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGttt                                                                >  1:4331305/1‑94 (MQ=255)
                            ggATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTtct                                                              >  2:5985860/1‑94 (MQ=255)
                              aTTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTca                                                            <  1:8192295/94‑1 (MQ=255)
                              aTTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTca                                                            >  2:6732031/1‑94 (MQ=255)
                              aTTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTca                                                            <  1:7420785/94‑1 (MQ=255)
                               ttGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcag                                                           >  2:8537795/1‑94 (MQ=255)
                               ttGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcag                                                           <  2:3620851/94‑1 (MQ=255)
                               ttGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcag                                                           >  2:6899636/1‑94 (MQ=255)
                                tGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATTGCGCGGTTTCTcagc                                                          >  1:9726030/1‑94 (MQ=255)
                                 gCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcagca                                                         >  2:3894382/1‑94 (MQ=255)
                                 gCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcagca                                                         >  2:8427583/1‑94 (MQ=255)
                                  cTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcagcag                                                        >  1:311122/1‑94 (MQ=255)
                                  cTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcagcag                                                        >  1:1057535/1‑94 (MQ=255)
                                  cTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTcagcag                                                        >  2:8803122/1‑94 (MQ=255)
                                  cTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCAACGTTGATTGAGATGGATCGCGCGGTTTCTcagcag                                                        >  1:3634598/1‑94 (MQ=255)
                                    tCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGtt                                                      >  2:1961992/1‑94 (MQ=255)
                                            aGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGa                                              >  2:2171873/1‑94 (MQ=255)
                                             gcggcgCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGaa                                             <  2:7203098/94‑1 (MQ=255)
                                              cggcgCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAAt                                            <  2:3464027/94‑1 (MQ=255)
                                               ggcgCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATc                                           <  2:2578189/94‑1 (MQ=255)
                                                gcgcgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCt                                          <  1:1821189/94‑1 (MQ=255)
                                                gcgcgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCt                                          <  1:7595926/94‑1 (MQ=255)
                                                 cgcgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTg                                         <  1:6436205/94‑1 (MQ=255)
                                                 cgcgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTg                                         >  1:9499399/1‑94 (MQ=255)
                                                 cgcgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTg                                         >  1:5663067/1‑94 (MQ=255)
                                                   cgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGc                                       <  2:1307163/94‑1 (MQ=255)
                                                   cgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGc                                       <  1:5476731/94‑1 (MQ=255)
                                                   cgcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGc                                       >  1:10025602/1‑94 (MQ=255)
                                                    gcTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCg                                      <  2:6444880/94‑1 (MQ=255)
                                                     cTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGa                                     >  1:10096352/1‑94 (MQ=255)
                                                     cTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGa                                     >  1:9109077/1‑94 (MQ=255)
                                                     cTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGa                                     >  2:4350717/1‑94 (MQ=255)
                                                      tGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGac                                    >  1:4026352/1‑94 (MQ=255)
                                                       ggggCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGaca                                   >  2:2918372/1‑94 (MQ=255)
                                                       ggggCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGaca                                   >  2:2451184/1‑94 (MQ=255)
                                                       ggggCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGaca                                   <  2:1458960/94‑1 (MQ=255)
                                                         ggCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACt                                 <  1:2903754/94‑1 (MQ=255)
                                                         ggCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACt                                 <  2:1213129/94‑1 (MQ=255)
                                                         ggCTGGAAGCGTTATCGCCTTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACt                                 <  2:10303327/94‑1 (MQ=255)
                                                          gCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTa                                <  1:598146/94‑1 (MQ=255)
                                                            tGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTaaa                              >  1:1948829/1‑94 (MQ=255)
                                                            tGGAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTaaa                              >  1:3355919/1‑94 (MQ=255)
                                                             ggAAGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTaaaa                             >  1:698503/1‑94 (MQ=255)
                                                               aaGCGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGc                           >  2:7439902/1‑94 (MQ=255)
                                                                  cGTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAgg                        >  1:5118921/1‑94 (MQ=255)
                                                                   gTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAgga                       >  1:8537132/1‑93 (MQ=255)
                                                                   gTTATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGc                       >  1:8812654/1‑94 (MQ=255)
                                                                   gTTAGCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGc                       <  2:2344109/94‑1 (MQ=255)
                                                                    ttATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCa                      >  2:4273317/1‑94 (MQ=255)
                                                                    ttATCGCGCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCa                      <  2:5813185/94‑1 (MQ=255)
                                                                        cgcgCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGAAGGCAATGc                  >  2:7285268/1‑94 (MQ=255)
                                                                        cgcgCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTAGCGACACTAAAAGCAGGCAATGc                  >  1:5814380/1‑94 (MQ=255)
                                                                        cgcgCTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATATGACGACACTAAAAGCAGGCAATGc                  >  2:453152/1‑94 (MQ=255)
                                                                          cgcTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCAc                >  1:2491967/1‑94 (MQ=255)
                                                                           gcTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCAcg               <  2:3105738/94‑1 (MQ=255)
                                                                           gcTACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCAcg               >  1:10377858/1‑94 (MQ=255)
                                                                           ccTACGCAGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCAcg               <  1:122562/93‑1 (MQ=255)
                                                                             tACGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCAcgcg             <  1:4839972/94‑1 (MQ=255)
                                                                               cGCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCgtg           >  2:1717599/1‑94 (MQ=255)
                                                                                gCTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCgtgg          <  2:1053470/94‑1 (MQ=255)
                                                                                 cTGCGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCgtggt         >  2:5318579/1‑94 (MQ=255)
                                                                                    cGGGGGCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGaa      <  2:8975279/94‑1 (MQ=255)
                                                                                     gggggCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAAc     <  1:7120039/94‑1 (MQ=255)
                                                                                      ggggCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACa    <  2:4035392/94‑1 (MQ=255)
                                                                                      ggggCGACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACa    <  1:1554702/94‑1 (MQ=255)
                                                                                           |                                                                                          
CTCCGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCAACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACAGC  >  NC_000913/3602166‑3602347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 363 total aligned reads displayed.
TGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGAT  >  NC_000913/3610283‑3610469
                                                                                             |                                                                                             
TGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGC                                                                                               <  SRR4302545.6317306/94‑1 (MQ=60)
TGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGC                                                                                               >  SRR4302545.605981/1‑94 (MQ=60)
TGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGC                                                                                               <  SRR4302545.7439526/94‑1 (MQ=60)
 GGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCG                                                                                              <  SRR4302545.8875754/94‑1 (MQ=60)
 GGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCG                                                                                              <  SRR4302545.2648504/94‑1 (MQ=60)
 GGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCG                                                                                              <  SRR4302545.129541/94‑1 (MQ=60)
   TCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGT                                                                                            <  SRR4302545.3267218/94‑1 (MQ=60)
   TCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGT                                                                                            <  SRR4302545.39557/94‑1 (MQ=60)
   TCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGT                                                                                            <  SRR4302545.4009216/94‑1 (MQ=60)
   TCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGT                                                                                            <  SRR4302545.9260105/94‑1 (MQ=60)
   GCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGTCCATCTCCTGGGGATGTCCACCATGGCGGT                                                                                            <  SRR4302545.1806992/94‑1 (MQ=60)
    CGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTA                                                                                           >  SRR4302545.7843501/1‑94 (MQ=60)
     GGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAT                                                                                          >  SRR4302545.4393889/1‑94 (MQ=60)
      GCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATT                                                                                         >  SRR4302545.4070524/1‑94 (MQ=60)
       CGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTT                                                                                        >  SRR4302545.4625125/1‑94 (MQ=60)
       CGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTT                                                                                        >  SRR4302545.9829004/1‑94 (MQ=60)
       CGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTT                                                                                        >  SRR4302545.7851503/1‑94 (MQ=60)
       CGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTT                                                                                        <  SRR4302545.9448124/94‑1 (MQ=60)
        GCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTT                                                                                       >  SRR4302545.9470655/1‑94 (MQ=60)
        GCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTC                                                                                       >  SRR4302545.1975610/1‑94 (MQ=60)
        CCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTC                                                                                       <  SRR4302545.1133775/94‑1 (MQ=60)
         tattttttgtggttgtccagtTGGTCATCGGCATTATTTTCGAACTAGGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCT                                                                                      <  SRR4302545.3140742/73‑1 (MQ=60)
         CATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCT                                                                                      <  SRR4302545.3140741/94‑1 (MQ=60)
          ATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTT                                                                                     <  SRR4302545.8583658/94‑1 (MQ=60)
          ATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTT                                                                                     >  SRR4302545.1486747/1‑94 (MQ=60)
          ATTGTTTTTAGTGGGCCATATTGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCCCCATTGCGGGATTTCTT                                                                                     >  SRR4302545.5223487/1‑94 (MQ=60)
            TGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTC                                                                                   >  SRR4302545.728737/1‑94 (MQ=60)
            TGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTC                                                                                   >  SRR4302545.10766755/1‑94 (MQ=60)
            TGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTC                                                                                   >  SRR4302545.10681056/1‑94 (MQ=60)
             GTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCA                                                                                  >  SRR4302545.3337396/1‑94 (MQ=60)
             GTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCA                                                                                  >  SRR4302545.277282/1‑94 (MQ=60)
              TTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAT                                                                                 <  SRR4302545.5118576/94‑1 (MQ=60)
              TTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAT                                                                                 <  SRR4302545.9952653/94‑1 (MQ=60)
              TTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAT                                                                                 <  SRR4302545.3469501/94‑1 (MQ=60)
              TTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAT                                                                                 >  SRR4302545.4606009/1‑94 (MQ=60)
              TTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAT                                                                                 >  SRR4302545.9858359/1‑94 (MQ=60)
               TTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATT                                                                                <  SRR4302545.3201513/94‑1 (MQ=60)
               TTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATT                                                                                >  SRR4302545.9344066/1‑94 (MQ=60)
               TTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATT                                                                                >  SRR4302545.9942974/1‑94 (MQ=60)
                TTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTG                                                                               <  SRR4302545.9132709/94‑1 (MQ=60)
                 TTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGT                                                                              <  SRR4302545.6728539/94‑1 (MQ=60)
                  TAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTT                                                                             <  SRR4302545.3215416/94‑1 (MQ=60)
                  TAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTT                                                                             >  SRR4302545.978932/1‑94 (MQ=60)
                  TAGTAGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTT                                                                             <  SRR4302545.2957602/94‑1 (MQ=60)
                   AGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTA                                                                            <  SRR4302545.2451869/94‑1 (MQ=60)
                   AGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTA                                                                            >  SRR4302545.8966476/1‑94 (MQ=60)
                    GTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAA                                                                           <  SRR4302545.10460769/94‑1 (MQ=60)
                     TGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAT                                                                          <  SRR4302545.8857186/94‑1 (MQ=60)
                     TGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAT                                                                          <  SRR4302545.8955177/94‑1 (MQ=60)
                      GGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATT                                                                         <  SRR4302545.10847628/94‑1 (MQ=60)
                       GTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTT                                                                        >  SRR4302545.9723948/1‑94 (MQ=60)
                       GTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTT                                                                        <  SRR4302545.1740908/94‑1 (MQ=60)
                        TCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTG                                                                       <  SRR4302545.8634678/94‑1 (MQ=60)
                        TCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTG                                                                       <  SRR4302545.8131895/94‑1 (MQ=60)
                        TCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTG                                                                       <  SRR4302545.8131894/94‑1 (MQ=60)
                         CCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGG                                                                      >  SRR4302545.5814068/1‑94 (MQ=60)
                           ATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTTATTGTTAATTTGGGG                                                                    >  SRR4302545.8718755/1‑94 (MQ=60)
                           ATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGG                                                                    <  SRR4302545.10019647/94‑1 (MQ=60)
                           ATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGG                                                                    >  SRR4302545.612207/1‑94 (MQ=60)
                           ATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGG                                                                    <  SRR4302545.10019646/94‑1 (MQ=60)
                           ATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGG                                                                    <  SRR4302545.7988534/94‑1 (MQ=60)
                            TATGGTCATCGGCAATATTTTAGAGCCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGA                                                                   <  SRR4302545.4460489/94‑1 (MQ=60)
                            TATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGA                                                                   <  SRR4302545.4968662/94‑1 (MQ=60)
                            TATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGA                                                                   >  SRR4302545.2623662/1‑94 (MQ=60)
                             ATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGAT                                                                  <  SRR4302545.3611525/94‑1 (MQ=60)
                              TGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATG                                                                 <  SRR4302545.7153769/94‑1 (MQ=60)
                              TGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATG                                                                 <  SRR4302545.8807994/94‑1 (MQ=60)
                              TGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATG                                                                 <  SRR4302545.4147449/94‑1 (MQ=60)
                              TAGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATG                                                                 <  SRR4302545.8271056/94‑1 (MQ=60)
                               GGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGG                                                                <  SRR4302545.5936344/94‑1 (MQ=60)
                               GGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGG                                                                <  SRR4302545.5655453/94‑1 (MQ=60)
                               GGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGG                                                                <  SRR4302545.5098834/94‑1 (MQ=60)
                                GTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGC                                                               >  SRR4302545.1354203/1‑94 (MQ=60)
                                 TCATCGGCAATATTTCAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCT                                                              <  SRR4302545.164676/94‑1 (MQ=60)
                                  CATCGGCAATATTTTAGAACCACGGATGATGGTCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTG                                                             >  SRR4302545.3023435/1‑94 (MQ=60)
                                  CATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTG                                                             >  SRR4302545.1374265/1‑94 (MQ=60)
                                   ATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGC                                                            <  SRR4302545.6764036/94‑1 (MQ=60)
                                   ATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGC                                                            <  SRR4302545.8021003/94‑1 (MQ=60)
                                   ATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGC                                                            >  SRR4302545.5667713/1‑94 (MQ=60)
                                   ATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGC                                                            >  SRR4302545.746698/1‑94 (MQ=60)
                                   ATCGGCAATATTTTAGAACCACGCATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGC                                                            <  SRR4302545.5995127/94‑1 (MQ=60)
                                    TCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCT                                                           <  SRR4302545.4308334/94‑1 (MQ=60)
                                     CGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTC                                                          >  SRR4302545.7366465/1‑94 (MQ=60)
                                      GGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCG                                                         <  SRR4302545.10602351/94‑1 (MQ=60)
                                       GCAATATTTTAGACCCACGGATGATGGGCCATCGCCTGGGGATGTCTACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGG                                                        <  SRR4302545.5736550/94‑1 (MQ=60)
                                       GCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGTTATTTCTTTCATTGTTAATGTGGGGATGGCTGCTCGG                                                        <  SRR4302545.2767718/94‑1 (MQ=60)
                                       GCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGG                                                        >  SRR4302545.3185782/1‑94 (MQ=60)
                                        CAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGC                                                       <  SRR4302545.5840671/94‑1 (MQ=60)
                                        CAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGC                                                       >  SRR4302545.6548639/1‑94 (MQ=60)
                                        CAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGC                                                       <  SRR4302545.1003218/94‑1 (MQ=60)
                                         AATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCC                                                      >  SRR4302545.3563297/1‑94 (MQ=60)
                                          ATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCG                                                     >  SRR4302545.9180823/1‑94 (MQ=60)
                                          ATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCC                                                     <  SRR4302545.1135809/94‑1 (MQ=60)
                                          ATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCC                                                     <  SRR4302545.2330009/94‑1 (MQ=60)
                                          ATATTTGAGAACCACGTATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCC                                                     <  SRR4302545.7437382/94‑1 (MQ=60)
                                           TATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCG                                                    <  SRR4302545.10284799/94‑1 (MQ=60)
                                           TATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCG                                                    <  SRR4302545.6366944/94‑1 (MQ=60)
                                            ATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGG                                                   <  SRR4302545.1360226/94‑1 (MQ=60)
                                             TTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGT                                                  >  SRR4302545.7203637/1‑94 (MQ=60)
                                             TTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGT                                                  >  SRR4302545.1866745/1‑94 (MQ=60)
                                             TTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGT                                                  >  SRR4302545.9575289/1‑94 (MQ=60)
                                              TTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTA                                                 >  SRR4302545.9290715/1‑94 (MQ=60)
                                               TTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAG                                                <  SRR4302545.9021748/94‑1 (MQ=60)
                                               TTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAG                                                <  SRR4302545.1315325/94‑1 (MQ=60)
                                                TAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGG                                               >  SRR4302545.6450024/1‑94 (MQ=60)
                                                TAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTAATTGTTAATTTGGGGATGGCTGCTCGG‑CCGGTAGGG                                              <  SRR4302545.7602607/94‑1 (MQ=60)
                                                 AGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGG                                              >  SRR4302545.8493744/1‑94 (MQ=60)
                                                 AGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGG                                              <  SRR4302545.5804759/94‑1 (MQ=60)
                                                 AGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGG                                              <  SRR4302545.2003295/94‑1 (MQ=60)
                                                  GAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGA                                             <  SRR4302545.4437255/94‑1 (MQ=60)
                                                   AACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAT                                            >  SRR4302545.6580473/1‑94 (MQ=60)
                                                   AACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAT                                            >  SRR4302545.905732/1‑94 (MQ=60)
                                                   AACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAT                                            <  SRR4302545.6645672/94‑1 (MQ=60)
                                                    ACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATG                                           <  SRR4302545.8007858/94‑1 (MQ=60)
                                                     CCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGC                                          >  SRR4302545.2267406/1‑94 (MQ=60)
                                                     CCACGGATGAGGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGC                                          >  SRR4302545.9139366/1‑94 (MQ=60)
                                                      CACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCT                                         <  SRR4302545.3249582/94‑1 (MQ=60)
                                                       CCGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTA                                        <  SRR4302545.9249792/94‑1 (MQ=60)
                                                       ACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTA                                        >  SRR4302545.4953791/1‑94 (MQ=60)
                                                         GGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACT                                      <  SRR4302545.2198887/94‑1 (MQ=60)
                                                         GGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACT                                      <  SRR4302545.184488/94‑1 (MQ=60)
                                                         CGATGATGGGCCATCGCCTGGGGATGTCCACCATTGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGTCCCGGTAGGGATGCTGCT                                      <  SRR4302545.6230677/94‑1 (MQ=60)
                                                          GATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGTGATGGCTGCTCGGCCCGGTAGGGATGCTACTT                                     <  SRR4302545.2512406/94‑1 (MQ=60)
                                                          GATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTT                                     >  SRR4302545.4511212/1‑94 (MQ=60)
                                                          GATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTT                                     >  SRR4302545.4235499/1‑94 (MQ=60)
                                                          GATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTT                                     <  SRR4302545.2100193/94‑1 (MQ=60)
                                                           ATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTT                                    >  SRR4302545.7936504/1‑94 (MQ=60)
                                                            TGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTC                                   >  SRR4302545.10634685/1‑94 (MQ=60)
                                                             GATGGGCCATCGCCTGGGGATGTCCGCCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCG                                  <  SRR4302545.5625535/94‑1 (MQ=60)
                                                             GATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCG                                  <  SRR4302545.4631619/94‑1 (MQ=60)
                                                             GATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCG                                  <  SRR4302545.5693807/94‑1 (MQ=60)
                                                             GATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCG                                  <  SRR4302545.7686222/94‑1 (MQ=60)
                                                              ATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGG                                 >  SRR4302545.6732726/1‑94 (MQ=60)
                                                              ATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGAGATGCTACTTTCGG                                 <  SRR4302545.7294877/94‑1 (MQ=60)
                                                              ATGGGCCATCGCCTGGGGATGTCCACCATGGCGGAATTTCTTTCATTGTTAATTTGGGGATGGCTGCTAGGCCCGGTAGGGATGCTACTTTCGG                                 >  SRR4302545.571614/1‑94 (MQ=60)
                                                                GGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTG                               >  SRR4302545.8681731/1‑94 (MQ=60)
                                                                  GCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCC                             >  SRR4302545.8735804/1‑94 (MQ=60)
                                                                  GCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCC                             >  SRR4302545.8041855/1‑94 (MQ=60)
                                                                  GCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCC                             <  SRR4302545.4846156/94‑1 (MQ=60)
                                                                  GCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTCCC                             <  SRR4302545.7564848/94‑1 (MQ=60)
                                                                   CCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCA                            >  SRR4302545.69995/1‑94 (MQ=60)
                                                                    CATCGCCTGGGGATGTCCACCATGGCGGTATTTTTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGGTAGTTTCGGTGCCAT                           >  SRR4302545.8355830/1‑94 (MQ=60)
                                                                    CATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAT                           <  SRR4302545.6021495/94‑1 (MQ=60)
                                                                    CATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAT                           <  SRR4302545.3869569/94‑1 (MQ=60)
                                                                    CATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAT                           >  SRR4302545.8299235/1‑94 (MQ=60)
                                                                    CATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTACGGATGCTACTTTCGGTGCCAT                           >  SRR4302545.4463365/1‑94 (MQ=60)
                                                                     ATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATT                          <  SRR4302545.5446476/94‑1 (MQ=60)
                                                                     ATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCAGGTAGGGATGCTACTTTCGGTGCCAGT                          >  SRR4302545.3753076/1‑94 (MQ=60)
                                                                      TCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTA                         <  SRR4302545.2376857/94‑1 (MQ=60)
                                                                      TCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTA                         <  SRR4302545.784400/94‑1 (MQ=60)
                                                                       CGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAA                        <  SRR4302545.1079597/94‑1 (MQ=60)
                                                                       CGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAA                        >  SRR4302545.786078/1‑94 (MQ=60)
                                                                        GGCTGGGGATGTCCCCCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAAC                       <  SRR4302545.9266523/94‑1 (MQ=60)
                                                                        GCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAAC                       >  SRR4302545.782299/1‑94 (MQ=60)
                                                                        GCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAAC                       >  SRR4302545.3236983/1‑94 (MQ=60)
                                                                         CCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGGTGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTGACC                      >  SRR4302545.5389132/1‑94 (MQ=60)
                                                                         CCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACC                      >  SRR4302545.328967/1‑94 (MQ=60)
                                                                         CCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACC                      <  SRR4302545.8238556/94‑1 (MQ=60)
                                                                          CTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCA                     >  SRR4302545.2683999/1‑94 (MQ=60)
                                                                           TGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAG                    <  SRR4302545.1937138/94‑1 (MQ=60)
                                                                           TGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAG                    <  SRR4302545.5724569/94‑1 (MQ=60)
                                                                           TGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAG                    <  SRR4302545.775448/94‑1 (MQ=60)
                                                                           TGGGGATGTCCACCATGGCGGTATTTCTTTCATTGATAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAG                    >  SRR4302545.3572998/1‑94 (MQ=60)
                                                                            GGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGC                   >  SRR4302545.2909766/1‑94 (MQ=60)
                                                                             GGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCG                  >  SRR4302545.5956107/1‑94 (MQ=60)
                                                                              GGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGT                 <  SRR4302545.10752382/94‑1 (MQ=60)
                                                                                ATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGT               >  SRR4302545.952437/1‑94 (MQ=60)
                                                                                ATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGT               <  SRR4302545.9629789/94‑1 (MQ=60)
                                                                                ATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGT               >  SRR4302545.5555549/1‑94 (MQ=60)
                                                                                ATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGT               >  SRR4302545.7948208/1‑94 (MQ=60)
                                                                                 TGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTG              <  SRR4302545.8993669/94‑1 (MQ=60)
                                                                                  GTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGT             <  SRR4302545.4654953/94‑1 (MQ=60)
                                                                                  GTCAACCATGGCGGTATTTCGTTCATTGTTAATTTGGGGATGGCTGCTCGGCCTGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGT             <  SRR4302545.7637477/94‑1 (MQ=60)
                                                                                    CCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAA           >  SRR4302545.3896822/1‑94 (MQ=60)
                                                                                    CCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAA           >  SRR4302545.1252740/1‑94 (MQ=60)
                                                                                    CCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAA           >  SRR4302545.10153982/1‑94 (MQ=60)
                                                                                     CACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAA          <  SRR4302545.7398974/94‑1 (MQ=60)
                                                                                     CACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAA          >  SRR4302545.7145528/1‑94 (MQ=60)
                                                                                     CACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAA          >  SRR4302545.4697144/1‑94 (MQ=60)
                                                                                      ACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGCTGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAA         >  SRR4302545.5433049/1‑94 (MQ=60)
                                                                                      ACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAA         >  SRR4302545.1020738/1‑94 (MQ=60)
                                                                                      ACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAA         >  SRR4302545.2805695/1‑94 (MQ=60)
                                                                                       CCATGGCGGTATTTCTTTCATTGTTAATTTGGGGTTGGCTGCTCGGTCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTATAAT        >  SRR4302545.9976462/1‑94 (MQ=60)
                                                                                        CATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATT       >  SRR4302545.2494565/1‑94 (MQ=60)
                                                                                        CATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATC       >  SRR4302545.2282198/1‑94 (MQ=60)
                                                                                        CATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATC       >  SRR4302545.8478782/1‑94 (MQ=60)
                                                                                        CATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATC       <  SRR4302545.8950183/94‑1 (MQ=60)
                                                                                         ATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCT      <  SRR4302545.3508152/94‑1 (MQ=60)
                                                                                         ATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCT      >  SRR4302545.4756123/1‑94 (MQ=60)
                                                                                         ATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCT      <  SRR4302545.1753499/94‑1 (MQ=60)
                                                                                          TGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTG     <  SRR4302545.3432763/94‑1 (MQ=60)
                                                                                          TGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGGCATTAACCAGCGTGTGTAAAATCTG     >  SRR4302545.10258684/1‑94 (MQ=60)
                                                                                          TGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTG     <  SRR4302545.8111021/94‑1 (MQ=60)
                                                                                           GGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGG    >  SRR4302545.9555458/1‑94 (MQ=60)
                                                                                           GGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGG    >  SRR4302545.10494516/1‑94 (MQ=60)
                                                                                            GCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTTCTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGA   <  SRR4302545.6009889/94‑1 (MQ=60)
                                                                                            GCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGA   <  SRR4302545.6897218/94‑1 (MQ=60)
                                                                                            GCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAGGCTATTTTCGGTGCCATTAACCAGCTTGGTTATAATCTGGA   >  SRR4302545.9683636/1‑94 (MQ=60)
                                                                                             CGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGAT  >  SRR4302545.1591427/1‑94 (MQ=60)
                                                                                             CGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGAT  <  SRR4302545.2573220/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGAT  >  NC_000913/3610283‑3610469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑