Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,610,376 T→C V294A (GTG→GCG)  b3474 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,610,3760TC98.8% 2055.0 / 5.0 604V294A (GTG→GCG) b3474hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (3/4);  new base C (294/303);  total (297/307)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 635 total aligned reads displayed.

GTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTG  >  NC_000913/3610285‑3610466
                                                                                           |                                                                                          
gTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCAtggcgg                                                                                          >  1:3917183/1‑94 (MQ=255)
   ggCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAt                                                                                       <  2:5604093/94‑1 (MQ=255)
      gcATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGTATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAtttc                                                                                    >  2:3683142/1‑94 (MQ=255)
      gcATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAtttc                                                                                    >  1:1927887/1‑94 (MQ=255)
      gcATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAtttc                                                                                    >  2:4957282/1‑94 (MQ=255)
      gcATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAtttc                                                                                    >  1:10157482/1‑94 (MQ=255)
         ttGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGCTGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTAtttcttt                                                                                 >  2:502941/1‑94 (MQ=255)
           gTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCa                                                                               >  1:271653/1‑94 (MQ=255)
           gTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCa                                                                               >  2:6429797/1‑94 (MQ=255)
            tttttAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAt                                                                              <  2:6073398/94‑1 (MQ=255)
            tttttAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAt                                                                              <  1:9666083/94‑1 (MQ=255)
             ttttAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCAtt                                                                             <  1:3124445/94‑1 (MQ=255)
              tttAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTg                                                                            >  2:2789040/1‑94 (MQ=255)
                 tgTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTa                                                                         <  2:9184669/93‑1 (MQ=255)
                 aGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTa                                                                         >  2:1495921/1‑94 (MQ=255)
                   tGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAt                                                                       <  1:8702742/94‑1 (MQ=255)
                   gggTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAt                                                                       <  1:6563784/93‑1 (MQ=255)
                   gggTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAt                                                                       <  2:6671178/93‑1 (MQ=255)
                    ggTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAtt                                                                      <  1:9182601/94‑1 (MQ=255)
                    ggTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAtt                                                                      <  1:10537236/94‑1 (MQ=255)
                     gTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAAttt                                                                     <  1:9793609/94‑1 (MQ=255)
                      tacATAGGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTg                                                                    <  2:7282282/92‑1 (MQ=255)
                      tCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTg                                                                    <  1:7907445/94‑1 (MQ=255)
                        cATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTggg                                                                  <  1:7238581/94‑1 (MQ=255)
                        cATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTggg                                                                  >  2:4291268/1‑94 (MQ=255)
                         atatGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTgggg                                                                 <  1:836094/94‑1 (MQ=255)
                         atatGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTgggg                                                                 >  2:2320989/1‑94 (MQ=255)
                          tatGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGa                                                                <  2:515772/94‑1 (MQ=255)
                           atGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGAt                                                               <  1:4514573/94‑1 (MQ=255)
                           atGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGAt                                                               >  2:3020356/1‑94 (MQ=255)
                            tGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATg                                                              <  2:5768301/94‑1 (MQ=255)
                            tGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATg                                                              <  1:6961841/94‑1 (MQ=255)
                              gTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgc                                                            >  2:7915566/1‑94 (MQ=255)
                              gTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgc                                                            >  2:10556747/1‑94 (MQ=255)
                               tCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgct                                                           >  1:1563298/1‑94 (MQ=255)
                                cATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgctg                                                          <  2:10274197/94‑1 (MQ=255)
                                 aTCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgctgc                                                         <  1:7800165/94‑1 (MQ=255)
                                 aTCGGCAATATTTTAGAACCACGCATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgctgc                                                         <  1:5837960/94‑1 (MQ=255)
                                  tCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGgctgct                                                        <  1:4203375/94‑1 (MQ=255)
                                   cGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTc                                                       <  2:8706488/94‑1 (MQ=255)
                                   cGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTc                                                       >  2:5531514/1‑94 (MQ=255)
                                     gCAATATTTTAGACCCACGGATGATGGGCCATCGCCTGGGGATGTCTACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCgg                                                     <  1:5588455/94‑1 (MQ=255)
                                      cAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGc                                                    >  2:8597388/1‑94 (MQ=255)
                                      cAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGc                                                    <  1:5688509/94‑1 (MQ=255)
                                      cAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGc                                                    >  2:7432063/1‑94 (MQ=255)
                                       aaTATTTTAGAACCCCGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTTTTTCATTGTTAATTTGGGGATGGCTGCTCGGcc                                                   >  2:7678667/1‑94 (MQ=255)
                                       aaTATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGcc                                                   <  2:9713639/94‑1 (MQ=255)
                                        atatTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGccc                                                  >  1:7629161/1‑94 (MQ=255)
                                         tatTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCg                                                 <  1:9988597/94‑1 (MQ=255)
                                          atTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCgg                                                <  1:1330609/94‑1 (MQ=255)
                                          atTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCgg                                                >  2:755594/1‑94 (MQ=255)
                                          atTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCgg                                                <  2:4496189/94‑1 (MQ=255)
                                           ttttAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGt                                               <  2:8473763/94‑1 (MQ=255)
                                            tttAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTa                                              <  2:2029221/94‑1 (MQ=255)
                                             ttAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAg                                             <  2:8894346/94‑1 (MQ=255)
                                             ttAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAg                                             <  1:8767302/94‑1 (MQ=255)
                                               aGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAggg                                           <  2:5907776/94‑1 (MQ=255)
                                                gAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGa                                          <  2:1340192/94‑1 (MQ=255)
                                                gAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGa                                          <  2:9560233/94‑1 (MQ=255)
                                                 aaCCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAt                                         <  2:6899695/94‑1 (MQ=255)
                                                 aaCCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGAt                                         >  1:6405314/1‑94 (MQ=255)
                                                  aCCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATg                                        <  1:4703789/94‑1 (MQ=255)
                                                   ccACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATgt                                       >  1:8881291/1‑93 (MQ=255)
                                                    cACGGATGATGTGCCATCGCCTGTGGATGTCCACCATTCTGGTATTTCTTTCATTGTTAATTTGGGTATGGCTGCTCTGCCCGGTAGGGATGCt                                      <  1:4361306/94‑1 (MQ=255)
                                                       ggATGATGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACt                                   <  1:2146343/94‑1 (MQ=255)
                                                       cgatgatGGGCCATCGCCTGGGGATGTCCACCATTGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGTCCCGGTAGGGATgctgct                                   <  1:6066034/93‑1 (MQ=255)
                                                        gatgatGGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGTGATGGCTGCTCGGCCCGGTAGGGATGCTACtt                                  <  1:2452984/94‑1 (MQ=255)
                                                          tgatgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTc                                >  1:10330112/1‑94 (MQ=255)
                                                          tgatgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTc                                <  1:8095796/94‑1 (MQ=255)
                                                           gatgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCg                               <  1:7474640/94‑1 (MQ=255)
                                                            atgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCgg                              <  1:7098291/94‑1 (MQ=255)
                                                            atgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCgg                              >  2:1016870/1‑94 (MQ=255)
                                                            atgGGCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCgg                              <  2:8076948/94‑1 (MQ=255)
                                                              gggCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTg                            >  2:3363049/1‑94 (MQ=255)
                                                                gCCATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGcc                          >  1:8490439/1‑94 (MQ=255)
                                                                 gcATCGCCTGGGGATGGCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCa                         <  2:3594599/93‑1 (MQ=255)
                                                                  cATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAt                        >  2:173074/1‑94 (MQ=255)
                                                                  cATCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAt                        <  1:3776265/94‑1 (MQ=255)
                                                                   aTCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAtt                       <  1:5308832/94‑1 (MQ=255)
                                                                   aTCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCAtt                       >  1:9562657/1‑94 (MQ=255)
                                                                    tCGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTa                      <  1:2320364/94‑1 (MQ=255)
                                                                     cGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTaa                     >  1:768803/1‑94 (MQ=255)
                                                                     cGCCTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTaa                     <  1:3478654/94‑1 (MQ=255)
                                                                      ggcTGGGGATGTCCCCCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAAc                    <  1:9004350/92‑1 (MQ=255)
                                                                       ccTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAAcc                   >  1:2957500/1‑94 (MQ=255)
                                                                        cTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCa                  >  1:5514224/1‑94 (MQ=255)
                                                                        cTGGGGATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCa                  <  1:1796460/94‑1 (MQ=255)
                                                                          ggggATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGc                <  2:6781122/94‑1 (MQ=255)
                                                                            ggATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgt              <  1:4976092/94‑1 (MQ=255)
                                                                            ggATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgt              <  2:3220760/94‑1 (MQ=255)
                                                                             gATGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgtg             >  1:3172601/1‑94 (MQ=255)
                                                                              aTGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgtgt            >  2:6241050/1‑94 (MQ=255)
                                                                              aTGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgtgt            <  1:9355401/94‑1 (MQ=255)
                                                                               tGTCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCgtgtg           <  2:3827069/94‑1 (MQ=255)
                                                                                 tCCACCATGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTa         >  2:4057640/1‑94 (MQ=255)
                                                                                  ccaccaTGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTaa        <  2:4788063/94‑1 (MQ=255)
                                                                                  ccaccaTGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTaa        >  1:1224986/1‑94 (MQ=255)
                                                                                   caccaTGGCGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTaaa       <  2:249481/94‑1 (MQ=255)
                                                                                        tggtggTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCtg  <  1:3350932/94‑1 (MQ=255)
                                                                                        tggcggTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCtg  <  2:8254648/94‑1 (MQ=255)
                                                                                           |                                                                                          
GTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTG  >  NC_000913/3610285‑3610466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 351 total aligned reads displayed.
CCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTACGC  >  NC_000913/3627049‑3627235
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CCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GG                                                                                                <  SRR4302545.8011509/94‑1 (MQ=60)
CCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GG                                                                                                <  SRR4302545.6672071/94‑1 (MQ=60)
 CATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GG‑G                                                                                              <  SRR4302545.8036697/94‑1 (MQ=60)
  ATACAGCGGGCCGGAATATCGAGATTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GGga                                                                                              >  SRR4302545.9384158/1‑92 (MQ=60)
   TACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GGgac                                                                                             <  SRR4302545.3233704/94‑4 (MQ=60)
    ACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACG                                                                                            >  SRR4302545.8587548/1‑94 (MQ=60)
    ACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACG                                                                                            <  SRR4302545.3720246/94‑1 (MQ=60)
     CAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGG                                                                                           <  SRR4302545.6616442/94‑1 (MQ=60)
      AGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGG                                                                                          <  SRR4302545.1370910/94‑1 (MQ=60)
      AGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGG                                                                                          <  SRR4302545.535397/94‑1 (MQ=60)
       GCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCCCGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGA                                                                                         <  SRR4302545.2250611/94‑1 (MQ=60)
        CGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCAAGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAA                                                                                        >  SRR4302545.6304620/1‑94 (MQ=60)
         GGGCCGGAATATCGGGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACACGCGGG‑ACGGGAAC                                                                                       >  SRR4302545.7918418/1‑94 (MQ=60)
         GGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAAC                                                                                       <  SRR4302545.4989679/94‑1 (MQ=60)
         GGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAAC                                                                                       >  SRR4302545.1736874/1‑94 (MQ=60)
         GGGCAGGAATATCGAGAGTGATATTGTTCAGCGCAGCGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAAC                                                                                       <  SRR4302545.7168690/94‑1 (MQ=60)
          GGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACC                                                                                      <  SRR4302545.10388441/94‑1 (MQ=60)
          GGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACC                                                                                      <  SRR4302545.2737617/94‑1 (MQ=60)
          GGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACC                                                                                      <  SRR4302545.2281057/94‑1 (MQ=60)
           GCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCA                                                                                     <  SRR4302545.10004105/94‑1 (MQ=60)
           GCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCA                                                                                     >  SRR4302545.5384825/1‑94 (MQ=60)
            CAGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAG                                                                                    <  SRR4302545.2680958/94‑1 (MQ=60)
             CGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGT                                                                                   >  SRR4302545.5687017/1‑94 (MQ=60)
             CGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGT                                                                                   >  SRR4302545.796002/1‑94 (MQ=60)
              GGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTT                                                                                  >  SRR4302545.8991813/1‑94 (MQ=60)
              GGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTT                                                                                  >  SRR4302545.1667608/1‑94 (MQ=60)
               GAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTC                                                                                 >  SRR4302545.6846294/1‑94 (MQ=60)
                AATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCC                                                                                <  SRR4302545.3360647/94‑1 (MQ=60)
                 ATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCA                                                                               >  SRR4302545.1587804/1‑94 (MQ=60)
                 ATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCA                                                                               >  SRR4302545.1588108/1‑94 (MQ=60)
                   ATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GGCACGGGAACACGTTCCAGA                                                                             >  SRR4302545.10192917/1‑94 (MQ=60)
                    TCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGAT                                                                            <  SRR4302545.6542066/94‑1 (MQ=60)
                     CGAGAGTGATATTTTTCAGCGCAACGGTTTTACCATAATGCTGGCTCAGGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATG                                                                           <  SRR4302545.10861219/94‑1 (MQ=60)
                      GAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGC                                                                          >  SRR4302545.4707955/1‑94 (MQ=60)
                      GAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGGTCCAGATGC                                                                          >  SRR4302545.1415949/1‑94 (MQ=60)
                       AGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGGCAGGCGGG‑ACGGGGACCAGTTACAGATGCG                                                                         >  SRR4302545.3544782/1‑94 (MQ=60)
                       AGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCG                                                                         >  SRR4302545.8470451/1‑94 (MQ=60)
                        GAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGT                                                                        >  SRR4302545.9521444/1‑94 (MQ=60)
                        GAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGT                                                                        >  SRR4302545.891430/1‑94 (MQ=60)
                        GAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGGTCCAGATGCGG                                                                        >  SRR4302545.5925477/1‑94 (MQ=60)
                         AGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTC                                                                       >  SRR4302545.5721247/1‑94 (MQ=60)
                         AGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTC                                                                       >  SRR4302545.8625234/1‑94 (MQ=60)
                          GTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCA                                                                      <  SRR4302545.2864193/94‑1 (MQ=60)
                          GTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCA                                                                      <  SRR4302545.7700085/94‑1 (MQ=60)
                          GTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCA                                                                      <  SRR4302545.4903758/94‑1 (MQ=60)
                           TGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCAT                                                                     >  SRR4302545.8924391/1‑94 (MQ=60)
                           TGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCAT                                                                     >  SRR4302545.6586696/1‑94 (MQ=60)
                           TGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCAT                                                                     >  SRR4302545.6782962/1‑94 (MQ=60)
                           TGATATTGTGCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCAT                                                                     <  SRR4302545.3378382/94‑1 (MQ=60)
                            GATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATT                                                                    <  SRR4302545.4862546/94‑1 (MQ=60)
                            GATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATT                                                                    >  SRR4302545.2137490/1‑94 (MQ=60)
                             ATATTGTTCAGCGCAACGTTTTTTCCATAATGCTGGCTCCCGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTG                                                                   <  SRR4302545.6770511/94‑1 (MQ=60)
                             ATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTG                                                                   <  SRR4302545.3125722/94‑1 (MQ=60)
                             ATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTG                                                                   <  SRR4302545.10487025/94‑1 (MQ=60)
                               ATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCCGATGCGTCCTTGCG                                                                 >  SRR4302545.2612299/1‑94 (MQ=60)
                               ATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTAACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCG                                                                 >  SRR4302545.10798949/1‑94 (MQ=60)
                                TTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGG                                                                <  SRR4302545.584622/94‑1 (MQ=60)
                                TTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGG                                                                >  SRR4302545.4530264/1‑94 (MQ=60)
                                 TGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGC                                                               <  SRR4302545.5347508/94‑1 (MQ=60)
                                   TTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAA                                                             <  SRR4302545.2811869/94‑1 (MQ=60)
                                   TTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAA                                                             >  SRR4302545.4286813/1‑94 (MQ=60)
                                    TCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAAC                                                            <  SRR4302545.7769602/94‑1 (MQ=60)
                                     CAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGGACCAGTTCCAGATGCGTCATTGCGGCAACC                                                           >  SRR4302545.4535449/1‑94 (MQ=60)
                                     CAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACC                                                           >  SRR4302545.6119075/1‑94 (MQ=60)
                                      AGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCT                                                          <  SRR4302545.2562371/94‑1 (MQ=60)
                                      AGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCT                                                          <  SRR4302545.2179718/94‑1 (MQ=60)
                                      AGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCT                                                          >  SRR4302545.9226630/1‑94 (MQ=60)
                                      AGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCT                                                          >  SRR4302545.3979520/1‑94 (MQ=60)
                                       GCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTC                                                         <  SRR4302545.2631368/94‑1 (MQ=60)
                                        CGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCC                                                        >  SRR4302545.3024039/1‑94 (MQ=60)
                                        CGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCA                                                        >  SRR4302545.4029968/1‑94 (MQ=60)
                                         GCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCAC                                                       >  SRR4302545.6358057/1‑94 (MQ=60)
                                         GCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCAC                                                       >  SRR4302545.2069380/1‑94 (MQ=60)
                                         GCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCAC                                                       >  SRR4302545.10350463/1‑94 (MQ=60)
                                          CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACC                                                      <  SRR4302545.8496029/94‑1 (MQ=60)
                                          CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACC                                                      >  SRR4302545.6099129/1‑94 (MQ=60)
                                          CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACC                                                      <  SRR4302545.9555705/94‑1 (MQ=60)
                                          CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACC                                                      >  SRR4302545.10095023/1‑94 (MQ=60)
                                           AACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCCACCTCACCA                                                     >  SRR4302545.10698526/1‑94 (MQ=60)
                                           AACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTaccca                                                     >  SRR4302545.9210020/1‑89 (MQ=60)
                                           AACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCA                                                     <  SRR4302545.6733272/94‑1 (MQ=60)
                                           AACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCA                                                     <  SRR4302545.3258433/94‑1 (MQ=60)
                                           AACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCA                                                     <  SRR4302545.9170868/94‑1 (MQ=60)
                                            ACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCAC                                                    <  SRR4302545.3233298/94‑1 (MQ=60)
                                            ACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCAC                                                    <  SRR4302545.7311646/94‑1 (MQ=60)
                                            ACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCAC                                                    >  SRR4302545.2160269/1‑94 (MQ=60)
                                            ACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCAC                                                    >  SRR4302545.7997370/1‑94 (MQ=60)
                                             CGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGTACCAGTTCCAGATGCGTCATTGCGGCAATCTCACCACG                                                   >  SRR4302545.7577850/1‑94 (MQ=60)
                                             CGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACG                                                   <  SRR4302545.5289061/94‑1 (MQ=60)
                                               GTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑AGGGGAACCAGTTCCAGATGCGTCCTTGCGGCAACCTCCCCACGCG                                                 >  SRR4302545.4585288/1‑94 (MQ=60)
                                               GTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGTACCAGTTCCAGATGCGGCATTGCCGCAACCTCACCACGAG                                                 >  SRR4302545.6806551/1‑94 (MQ=60)
                                               GTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAG                                                 <  SRR4302545.8363307/94‑1 (MQ=60)
                                               GTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAG                                                 <  SRR4302545.10461127/94‑1 (MQ=60)
                                                TTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGG                                                <  SRR4302545.6015062/94‑1 (MQ=60)
                                                TTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGG                                                >  SRR4302545.2757317/1‑94 (MQ=60)
                                                 TTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGTGGT                                               >  SRR4302545.10513149/1‑94 (MQ=60)
                                                 TTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGT                                               <  SRR4302545.1559246/94‑1 (MQ=60)
                                                 TTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGT                                               <  SRR4302545.6447485/94‑1 (MQ=60)
                                                 TTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGC                                               >  SRR4302545.8237125/1‑94 (MQ=60)
                                                  TTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTC                                              <  SRR4302545.3539189/94‑1 (MQ=60)
                                                  TTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTC                                              <  SRR4302545.8413610/94‑1 (MQ=60)
                                                  TTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTC                                              <  SRR4302545.8187469/94‑1 (MQ=60)
                                                   TTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGGCG                                             >  SRR4302545.3397732/1‑94 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           <  SRR4302545.5958297/94‑1 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           <  SRR4302545.3373961/94‑1 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           <  SRR4302545.7054851/94‑1 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           <  SRR4302545.4726297/94‑1 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           <  SRR4302545.2226382/94‑1 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           >  SRR4302545.7402445/1‑94 (MQ=60)
                                                     CCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTC                                           >  SRR4302545.2099537/1‑94 (MQ=60)
                                                      CATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA                                          <  SRR4302545.3016116/94‑1 (MQ=60)
                                                       ATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAG                                         >  SRR4302545.2507402/1‑94 (MQ=60)
                                                       ATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAG                                         >  SRR4302545.4090846/1‑94 (MQ=60)
                                                       ATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAG                                         >  SRR4302545.6821703/1‑94 (MQ=60)
                                                       ATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAG                                         <  SRR4302545.6971613/94‑1 (MQ=60)
                                                        TAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGG                                        <  SRR4302545.5732146/94‑1 (MQ=60)
                                                        TAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGG                                        <  SRR4302545.10293050/94‑1 (MQ=60)
                                                        TAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCCTCAGG                                        >  SRR4302545.10014215/1‑94 (MQ=60)
                                                        TAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAAGTCGTCAGG                                        >  SRR4302545.1980007/1‑94 (MQ=60)
                                                        TAATGCTGCCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGG                                        <  SRR4302545.6423568/94‑1 (MQ=60)
                                                         AATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCACGAGGTCGTCAGGC                                       >  SRR4302545.3882658/1‑94 (MQ=60)
                                                         AATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGC                                       >  SRR4302545.3649126/1‑94 (MQ=60)
                                                         AATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGC                                       >  SRR4302545.6874712/1‑94 (MQ=60)
                                                          ATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCC                                      >  SRR4302545.6788201/1‑94 (MQ=60)
                                                          ATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCC                                      >  SRR4302545.10369661/1‑94 (MQ=60)
                                                           TGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCA                                     <  SRR4302545.5106726/94‑1 (MQ=60)
                                                            GCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCAC                                    <  SRR4302545.1162146/94‑1 (MQ=60)
                                                             CTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACG                                   >  SRR4302545.1317691/1‑94 (MQ=60)
                                                             CTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACG                                   <  SRR4302545.4437741/94‑1 (MQ=60)
                                                              gggcgccgGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGG                                  <  SRR4302545.8603763/86‑1 (MQ=60)
                                                              TGGCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGG                                  >  SRR4302545.7645747/1‑94 (MQ=60)
                                                              TGGCTCACGCCCGCCAGTTGCGCGACAGGCAGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGG                                  >  SRR4302545.6710650/1‑94 (MQ=60)
                                                                GCTCACGCCCGCGAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAA                                <  SRR4302545.6302491/94‑1 (MQ=60)
                                                                GCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAA                                <  SRR4302545.9358989/94‑1 (MQ=60)
                                                                GCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAA                                <  SRR4302545.6302490/94‑1 (MQ=60)
                                                                GCTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAA                                >  SRR4302545.8085196/1‑94 (MQ=60)
                                                                 CTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAG                               >  SRR4302545.10785596/1‑94 (MQ=60)
                                                                 CTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAG                               <  SRR4302545.1021758/94‑1 (MQ=60)
                                                                 CTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAG                               >  SRR4302545.5418354/1‑94 (MQ=60)
                                                                 CTCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGACACGGAAG                               >  SRR4302545.4154476/1‑94 (MQ=60)
                                                                  TCACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGT                              >  SRR4302545.7891728/1‑94 (MQ=60)
                                                                  TCACGACCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGACGTCAGGCCACTGTAGT                              >  SRR4302545.6540178/1‑94 (MQ=60)
                                                                   CACGCCCGCCTGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCATATGCGTCATTGCGGCAACCTCACCACGAGGGCGTCAGGCCACGGTAGTT                             >  SRR4302545.9940601/1‑94 (MQ=60)
                                                                   CACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTT                             <  SRR4302545.4007714/94‑1 (MQ=60)
                                                                   CACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTT                             >  SRR4302545.5472424/1‑94 (MQ=60)
                                                                   CACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTT                             <  SRR4302545.10822248/94‑1 (MQ=60)
                                                                    ACGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCCGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGCAGTTC                            >  SRR4302545.9426064/1‑94 (MQ=60)
                                                                     CGCCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCT                           <  SRR4302545.7749196/94‑1 (MQ=60)
                                                                       CCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTC                         >  SRR4302545.4681464/1‑94 (MQ=60)
                                                                       CCCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTC                         >  SRR4302545.868272/1‑94 (MQ=60)
                                                                        CCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCT                        >  SRR4302545.3014829/1‑94 (MQ=60)
                                                                        CCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCA                        <  SRR4302545.5895479/94‑1 (MQ=60)
                                                                        CCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCA                        >  SRR4302545.1605086/1‑94 (MQ=60)
                                                                        CCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCA                        >  SRR4302545.3461187/1‑94 (MQ=60)
                                                                        CCGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCA                        <  SRR4302545.3656898/94‑1 (MQ=60)
                                                                         CGCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCAT                       <  SRR4302545.5473264/94‑1 (MQ=60)
                                                                          GCTAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATT                      <  SRR4302545.6386813/94‑1 (MQ=60)
                                                                          GCCAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATT                      >  SRR4302545.9797344/1‑94 (MQ=60)
                                                                          GCCAGTTGCGCGACAGACGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATT                      <  SRR4302545.8266824/94‑1 (MQ=60)
                                                                            CAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCA                    >  SRR4302545.4485772/1‑94 (MQ=60)
                                                                            CAGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCA                    >  SRR4302545.1227525/1‑94 (MQ=60)
                                                                             AGTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAC                   <  SRR4302545.1999929/94‑1 (MQ=60)
                                                                              GTTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACC                  <  SRR4302545.10206890/94‑1 (MQ=60)
                                                                               TTGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCC                 <  SRR4302545.8011839/94‑1 (MQ=60)
                                                                                TGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGTCCACGGAAGTTCTTCATTCACCCG                <  SRR4302545.1711434/94‑1 (MQ=60)
                                                                                TGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCG                <  SRR4302545.599878/94‑1 (MQ=60)
                                                                                TGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCG                <  SRR4302545.7292078/94‑1 (MQ=60)
                                                                                TGCGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCG                <  SRR4302545.2335584/94‑1 (MQ=60)
                                                                                  CGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGTGGTCGTCCGGCCACGGAAGTTCTTCATTCACCCGCA              >  SRR4302545.4261298/1‑94 (MQ=60)
                                                                                  CGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCC              >  SRR4302545.3533994/1‑94 (MQ=60)
                                                                                  CGCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCA              <  SRR4302545.10553687/94‑1 (MQ=60)
                                                                                   GCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCAC             <  SRR4302545.9361627/94‑1 (MQ=60)
                                                                                   GCGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCAC             >  SRR4302545.1921090/1‑94 (MQ=60)
                                                                                    CGACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACC            <  SRR4302545.7845162/94‑1 (MQ=60)
                                                                                     GACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCC           >  SRR4302545.9091618/1‑94 (MQ=60)
                                                                                     GACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCC           <  SRR4302545.8864502/94‑1 (MQ=60)
                                                                                      ACAGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCA          <  SRR4302545.9867679/94‑1 (MQ=60)
                                                                                        AGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACG        <  SRR4302545.1455437/94‑1 (MQ=60)
                                                                                        AGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACG        <  SRR4302545.6119403/94‑1 (MQ=60)
                                                                                        AGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACG        >  SRR4302545.7561209/1‑94 (MQ=60)
                                                                                        AGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACG        <  SRR4302545.2417597/94‑1 (MQ=60)
                                                                                        AGGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGACGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACG        >  SRR4302545.5894993/1‑94 (MQ=60)
                                                                                         GGG‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCT      <  SRR4302545.7741876/94‑1 (MQ=60)
                                                                                         GGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGC       <  SRR4302545.3940685/94‑1 (MQ=60)
                                                                                         GGCGGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGC       <  SRR4302545.3940684/94‑1 (MQ=60)
                                                                                          gcgGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCT      <  SRR4302545.9728829/91‑1 (MQ=60)
                                                                                          gcgGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCT      <  SRR4302545.1806362/91‑1 (MQ=60)
                                                                                           cgGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTA     <  SRR4302545.9242438/92‑1 (MQ=60)
                                                                                           cgGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTA     >  SRR4302545.4200867/3‑94 (MQ=60)
                                                                                           cgGG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTA     <  SRR4302545.6963021/92‑1 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCCTTCACCCGCACCCACGCTAC    >  SRR4302545.6355959/1‑94 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    <  SRR4302545.4769670/94‑1 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    <  SRR4302545.549291/94‑1 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    >  SRR4302545.10432390/1‑94 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    >  SRR4302545.850198/1‑94 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    >  SRR4302545.8614302/1‑94 (MQ=60)
                                                                                           G‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTAC    <  SRR4302545.4639776/94‑1 (MQ=60)
                                                                                             GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTACG   >  SRR4302545.3588331/1‑94 (MQ=60)
                                                                                             GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTACG   <  SRR4302545.8822817/94‑1 (MQ=60)
                                                                                              G‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTACGC  >  SRR4302545.1210390/1‑94 (MQ=60)
                                                                                              |                                                                                              
CCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GG‑ACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGCTACGC  >  NC_000913/3627049‑3627235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑