Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,881,483	Δ1 bp	intergenic (‑126/‑482)	dnaA ← / → rpmH	DnaA/50S ribosomal subunit protein L34

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,881,483	0	G	.	99.8%	3732.7 / ‑1.3	819	intergenic (‑126/‑482)	dnaA/rpmH	DnaA/50S ribosomal subunit protein L34
Reads supporting (aligned to +/- strand): ref base G (1/1); new base . (426/390); total (427/392)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 831 total aligned reads displayed.

AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT  >  NC_000913/3881394‑3881571

aGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg                                                                                     <  2:1557429/94‑1 (MQ=255)

aGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg                                                                                     >  1:576753/1‑94 (MQ=255)

aGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg                                                                                     >  2:7650946/1‑94 (MQ=255)

aGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg                                                                                     <  1:5252042/94‑1 (MQ=255)

  gCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAt                                                                                   <  2:1812147/94‑1 (MQ=255)

    tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                 >  1:2633736/1‑94 (MQ=255)

      aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTg                                                                               <  1:484613/94‑1 (MQ=255)

        aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCa                                                                             >  2:811767/1‑94 (MQ=255)

        aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCa                                                                             >  1:4031028/1‑94 (MQ=255)

        aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGGTATATGCCCGA‑TCAATATCCTGCa                                                                             >  1:5903686/1‑94 (MQ=255)

         cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                            >  2:1076274/1‑94 (MQ=255)

         cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                            >  1:3659400/1‑94 (MQ=255)

         cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                            <  2:3574268/94‑1 (MQ=255)

           ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCGAGATCCTGCaaaa                                                                          >  1:3058277/1‑94 (MQ=255)

           ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCacaa                                                                          >  1:2533760/1‑94 (MQ=255)

           ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                          <  1:10559689/94‑1 (MQ=255)

            tCATGATTGTTGACGTACGTCGAAAAGCCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                         <  2:6921381/94‑1 (MQ=255)

               tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                      <  2:8733709/94‑1 (MQ=255)

                gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                     <  2:6144683/94‑1 (MQ=255)

                gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                     >  2:9706569/1‑94 (MQ=255)

                gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                     >  1:2928463/1‑94 (MQ=255)

                gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                     >  2:9247812/1‑94 (MQ=255)

                 aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg                                                                    >  2:8557335/1‑94 (MQ=255)

                 aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg                                                                    >  1:1171246/1‑94 (MQ=255)

                  ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                   <  2:2603482/94‑1 (MQ=255)

                  ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                   <  1:9246743/94‑1 (MQ=255)

                   tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCggg                                                                  >  1:9805292/1‑94 (MQ=255)

                    gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa                                                                 >  2:6370724/1‑94 (MQ=255)

                    gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa                                                                 <  2:6018282/94‑1 (MQ=255)

                     ttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                                <  1:793157/94‑1 (MQ=255)

                      tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                               >  2:9095864/1‑94 (MQ=255)

                      tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                               <  2:2146077/94‑1 (MQ=255)

                      tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                               <  1:1486992/94‑1 (MQ=255)

                        acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                             >  1:2002262/1‑94 (MQ=255)

                        acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                             <  1:1841982/94‑1 (MQ=255)

                        acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgc                                                             <  2:8991985/94‑1 (MQ=255)

                          gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                           >  2:5846661/1‑94 (MQ=255)

                          gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                           >  2:4519450/1‑94 (MQ=255)

                           tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGa                                                          <  1:6293580/94‑1 (MQ=255)

                           tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGa                                                          >  1:3563272/1‑94 (MQ=255)

                             cgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                        <  1:5631420/94‑1 (MQ=255)

                                cGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATcctg                                                     >  2:2917200/1‑91 (MQ=255)

                                cGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                     <  1:6438935/94‑1 (MQ=255)

                                 gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                    >  2:9860970/1‑94 (MQ=255)

                                 gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                    <  1:3389910/94‑1 (MQ=255)

                                  aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc                                                   >  1:10359142/1‑94 (MQ=255)

                                    aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt                                                 >  2:7475762/1‑94 (MQ=255)

                                       aCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                              >  2:87629/1‑94 (MQ=255)

                                        cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAc                                             <  1:6813333/94‑1 (MQ=255)

                                         ccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                            <  1:7115119/94‑1 (MQ=255)

                                          cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                           <  2:4910430/94‑1 (MQ=255)

                                          cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                           >  2:6648875/1‑94 (MQ=255)

                                           tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgc                                          <  2:1958803/94‑1 (MQ=255)

                                            gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcg                                         >  2:3290218/1‑94 (MQ=255)

                                            gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcg                                         <  1:8109093/94‑1 (MQ=255)

                                               tGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa                                      >  1:7551452/1‑94 (MQ=255)

                                               tGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa                                      <  2:71296/94‑1 (MQ=255)

                                                 aGGGTGACGCACGAACCGTTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga                                    <  1:6591310/94‑1 (MQ=255)

                                                 aGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga                                    >  1:3894077/1‑94 (MQ=255)

                                                   ggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                  <  1:5411706/94‑1 (MQ=255)

                                                   ggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                  >  2:3032457/1‑94 (MQ=255)

                                                     tGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                                >  1:5061483/1‑94 (MQ=255)

                                                     ggACGCACGAACCGCTGTCTGCTGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                                <  1:9036184/93‑1 (MQ=255)

                                                      gACGCACGAACCGCTGTCTGTGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                               >  2:7855658/1‑94 (MQ=255)

                                                      gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                               <  2:1299567/94‑1 (MQ=255)

                                                      gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAAGATCGGGACCGCGGATCATAGCCTCAACTGAGCAAGAGAtct                               >  2:4769506/1‑94 (MQ=255)

                                                       aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt                              <  2:5353329/94‑1 (MQ=255)

                                                         gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttct                            <  2:6488108/94‑1 (MQ=255)

                                                          cACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTg                           >  2:2352673/1‑94 (MQ=255)

                                                           aCGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                          >  1:605665/1‑94 (MQ=255)

                                                           aCGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                          >  1:1010809/1‑94 (MQ=255)

                                                            cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt                         <  1:4505357/94‑1 (MQ=255)

                                                            cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt                         >  2:5722511/1‑94 (MQ=255)

                                                              aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtc                       >  1:6704491/1‑94 (MQ=255)

                                                               aCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct                      <  1:1357910/94‑1 (MQ=255)

                                                               aCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct                      >  1:1692579/1‑94 (MQ=255)

                                                               aCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct                      <  1:7803767/94‑1 (MQ=255)

                                                               aCCGCTGTATGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct                      <  1:2205403/94‑1 (MQ=255)

                                                                ccGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtctc                     <  2:10133428/94‑1 (MQ=255)

                                                                 cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca                    <  2:8855772/94‑1 (MQ=255)

                                                                 cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca                    >  1:8618744/1‑94 (MQ=255)

                                                                 cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAGCTTCTGTTTCTca                    >  2:9382324/1‑94 (MQ=255)

                                                                   cTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                  >  2:10199177/1‑94 (MQ=255)

                                                                    tGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                 <  1:7339291/94‑1 (MQ=255)

                                                                        tGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAttt             >  2:3467345/1‑94 (MQ=255)

                                                                         gCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtttt            <  2:3698888/94‑1 (MQ=255)

                                                                          cGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc           <  2:8309093/94‑1 (MQ=255)

                                                                            gTTATATGCGCGA‑TGAAGATCCTGCATAACGGTCGGGCCCGCTGATCAGAGCCTACACTGCGCAAGAGATCGTCTGTTGCTCACAGATTTTccc         <  2:10330282/94‑1 (MQ=255)

                                                                            gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc         >  2:3914832/1‑94 (MQ=255)

                                                                            gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc         >  2:4049426/1‑94 (MQ=255)

                                                                            gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc         <  2:10560220/94‑1 (MQ=255)

                                                                             ttATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCg        <  1:8324626/94‑1 (MQ=255)

                                                                              tataTGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGa       >  2:3185199/1‑94 (MQ=255)

                                                                               atatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCgct      <  1:9488529/94‑3 (MQ=255)

                                                                                tatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAtt     >  2:1471299/1‑94 (MQ=255)

                                                                                 atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt    <  1:8920462/94‑1 (MQ=255)

                                                                                 atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt    >  2:5002908/1‑94 (MQ=255)

                                                                                 atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt    <  2:4296324/94‑1 (MQ=255)

                                                                                  tGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTa   <  2:5627547/94‑1 (MQ=255)

                                                                                  tGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTa   >  2:5171378/1‑94 (MQ=255)

AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT  >  NC_000913/3881394‑3881571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 417 total aligned reads displayed.

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCA  >  NC_000913/3896231‑3896417

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA                                                                                                <  SRR4302545.3389344/94‑1 (MQ=60)

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA                                                                                                <  SRR4302545.1464262/94‑1 (MQ=60)

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA                                                                                                >  SRR4302545.38289/1‑94 (MQ=60)

 TTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑G                                                                                              <  SRR4302545.4763114/94‑1 (MQ=60)

 TTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCA‑G                                                                                              >  SRR4302545.1477676/1‑94 (MQ=60)

  TCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgc                                                                                              <  SRR4302545.7398759/94‑3 (MQ=60)

  TCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgc                                                                                              <  SRR4302545.47029/94‑3 (MQ=60)

  TCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgc                                                                                              >  SRR4302545.9206897/1‑92 (MQ=60)

   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                             >  SRR4302545.8027599/1‑91 (MQ=60)

   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                             >  SRR4302545.7133498/1‑91 (MQ=60)

    GTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGG                                                                                            <  SRR4302545.9300064/94‑1 (MQ=60)

    GTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGG                                                                                            >  SRR4302545.1090299/1‑94 (MQ=60)

    GTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCAGCGG                                                                                            >  SRR4302545.5675821/1‑94 (MQ=60)

    GCAGTTATCTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTCATTTCCTAAGCTTAACCGAGGGCTAATGCTGCGGCAGCGG                                                                                            >  SRR4302545.9651399/1‑94 (MQ=60)

     TAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGC                                                                                           >  SRR4302545.4192612/1‑94 (MQ=60)

     TAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGC                                                                                           >  SRR4302545.10547621/1‑94 (MQ=60)

     TAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGC                                                                                           >  SRR4302545.3352288/1‑94 (MQ=60)

      AGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCT                                                                                          <  SRR4302545.3231071/94‑1 (MQ=60)

       GTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTT                                                                                         >  SRR4302545.901577/1‑94 (MQ=60)

       GTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTT                                                                                         >  SRR4302545.1029143/1‑94 (MQ=60)

       GTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTT                                                                                         >  SRR4302545.5487611/1‑94 (MQ=60)

         TATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTT                                                                                       >  SRR4302545.7853823/1‑94 (MQ=60)

         TATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTA                                                                                       <  SRR4302545.9470850/94‑1 (MQ=60)

          ATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAT                                                                                      <  SRR4302545.374960/94‑1 (MQ=60)

          ATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAT                                                                                      <  SRR4302545.4246297/94‑1 (MQ=60)

          ATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAT                                                                                      >  SRR4302545.7026438/1‑94 (MQ=60)

            TTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCA                                                                                    >  SRR4302545.3040233/1‑94 (MQ=60)

            TTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCA                                                                                    <  SRR4302545.4892975/94‑1 (MQ=60)

             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                                   >  SRR4302545.10791076/1‑94 (MQ=60)

             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                                   >  SRR4302545.5821163/1‑94 (MQ=60)

              AAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGC                                                                                  >  SRR4302545.8838103/1‑94 (MQ=60)

                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                               >  SRR4302545.2599612/1‑94 (MQ=60)

                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                               >  SRR4302545.6220516/1‑94 (MQ=60)

                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                               >  SRR4302545.1008426/1‑94 (MQ=60)

                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                               <  SRR4302545.9533227/94‑1 (MQ=60)

                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                             >  SRR4302545.10830424/1‑94 (MQ=60)

                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                             <  SRR4302545.2936669/94‑1 (MQ=60)

                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                             >  SRR4302545.10524368/1‑94 (MQ=60)

                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                             >  SRR4302545.8929934/1‑94 (MQ=60)

                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                             <  SRR4302545.2762019/94‑1 (MQ=60)

                    TGAGAACAGGCCGGAGCGTAATTAACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAC                                                                            >  SRR4302545.9276671/1‑94 (MQ=60)

                     GAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACC                                                                           <  SRR4302545.10703477/94‑1 (MQ=60)

                     GAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACC                                                                           <  SRR4302545.807165/94‑1 (MQ=60)

                      AGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCA                                                                          <  SRR4302545.5947203/94‑1 (MQ=60)

                       GAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAT                                                                         <  SRR4302545.2398851/94‑1 (MQ=60)

                        AACAGGCCGGAGCTTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                        <  SRR4302545.8110026/94‑1 (MQ=60)

                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                        <  SRR4302545.3575646/94‑1 (MQ=60)

                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                        >  SRR4302545.2500062/1‑94 (MQ=60)

                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                        <  SRR4302545.5752687/94‑1 (MQ=60)

                         ACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCA                                                                       >  SRR4302545.8746122/1‑94 (MQ=60)

                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                      >  SRR4302545.925157/1‑94 (MQ=60)

                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                      >  SRR4302545.8358263/1‑94 (MQ=60)

                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                      <  SRR4302545.7320617/94‑1 (MQ=60)

                           AGGCCTGAGCGTAATTTACATATCCGGCCTTATTTCTTAAGCTTTACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCTATTACCATCAGC                                                                     >  SRR4302545.9961750/1‑94 (MQ=60)

                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGTTAATTCTGCGGCAGAGGCTTTATCAGCGATTACCATCAGC                                                                     >  SRR4302545.1657713/1‑94 (MQ=60)

                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                     >  SRR4302545.5312695/1‑94 (MQ=60)

                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                     >  SRR4302545.5627878/1‑94 (MQ=60)

                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                     >  SRR4302545.6490611/1‑94 (MQ=60)

                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                     <  SRR4302545.8611663/94‑1 (MQ=60)

                            GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCG                                                                    >  SRR4302545.352540/1‑94 (MQ=60)

                            GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCG                                                                    <  SRR4302545.9144570/94‑1 (MQ=60)

                            GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCG                                                                    >  SRR4302545.4147704/1‑94 (MQ=60)

                              CCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATGAGCGAA                                                                  >  SRR4302545.5927785/1‑94 (MQ=60)

                               CGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAG                                                                 >  SRR4302545.6944468/1‑94 (MQ=60)

                               CGGAGCGTAATTCACACATCCGGCCTTATTGCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAG                                                                 >  SRR4302545.6710611/1‑94 (MQ=60)

                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                                >  SRR4302545.6823691/1‑94 (MQ=60)

                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                                >  SRR4302545.3540129/1‑94 (MQ=60)

                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                                >  SRR4302545.10775418/1‑94 (MQ=60)

                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                                >  SRR4302545.9622789/1‑94 (MQ=60)

                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                                >  SRR4302545.5086083/1‑94 (MQ=60)

                                  AGCGTAATTCACGCATCCGGGCTTATTTCTTAAGCTTAACCGAATGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAT                                                              <  SRR4302545.3570515/94‑1 (MQ=60)

                                  AGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAT                                                              <  SRR4302545.4476375/94‑1 (MQ=60)

                                   GCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATG                                                             <  SRR4302545.2657247/94‑1 (MQ=60)

                                    CGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGC                                                            >  SRR4302545.7815047/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGGTGCA                                                           >  SRR4302545.8416737/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                           >  SRR4302545.112238/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                           <  SRR4302545.1783624/94‑1 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                           >  SRR4302545.1989881/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                           >  SRR4302545.1937718/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATGACCATCAGCGAATGATGCA                                                           >  SRR4302545.9666920/1‑94 (MQ=60)

                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTATGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                           >  SRR4302545.7270555/1‑94 (MQ=60)

                                      TAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAG                                                          <  SRR4302545.10261072/94‑1 (MQ=60)

                                      TAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAG                                                          <  SRR4302545.8649212/94‑1 (MQ=60)

                                      TAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAG                                                          >  SRR4302545.7667161/1‑94 (MQ=60)

                                      TAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAG                                                          <  SRR4302545.332772/94‑1 (MQ=60)

                                       AATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGC                                                         <  SRR4302545.8761886/94‑1 (MQ=60)

                                        ATACACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCT                                                        <  SRR4302545.10614479/94‑1 (MQ=60)

                                         TTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTG                                                       >  SRR4302545.1197438/1‑94 (MQ=60)

                                         TTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTG                                                       >  SRR4302545.206322/1‑94 (MQ=60)

                                          TCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAgggaggaagctga                                                      >  SRR4302545.4072/1‑81 (MQ=60)

                                           CACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCA                                                     <  SRR4302545.3605812/94‑1 (MQ=60)

                                            ACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTTTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGTTGCAGCTGCAA                                                    >  SRR4302545.8520850/1‑94 (MQ=60)

                                            ACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAA                                                    <  SRR4302545.3142066/94‑1 (MQ=60)

                                              ACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACA                                                  <  SRR4302545.814536/94‑1 (MQ=60)

                                              ACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACA                                                  <  SRR4302545.3673229/94‑1 (MQ=60)

                                               CATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACAC                                                 >  SRR4302545.10126336/1‑94 (MQ=60)

                                                ATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACG                                                <  SRR4302545.3914813/94‑1 (MQ=60)

                                                   CGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAA                                             <  SRR4302545.7631793/94‑1 (MQ=60)

                                                   CGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAA                                             >  SRR4302545.9911791/1‑94 (MQ=60)

                                                   CGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAA                                             <  SRR4302545.684271/94‑1 (MQ=60)

                                                   CGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAA                                             >  SRR4302545.9333483/1‑94 (MQ=60)

                                                    GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAG                                            >  SRR4302545.2805441/1‑94 (MQ=60)

                                                    GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAG                                            <  SRR4302545.3264178/94‑1 (MQ=60)

                                                     GCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGC                                           <  SRR4302545.4586570/94‑1 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCCACACGGAAGCT                                          >  SRR4302545.2030968/1‑94 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                          >  SRR4302545.1589106/1‑94 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                          >  SRR4302545.615456/1‑94 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                          <  SRR4302545.2176076/94‑1 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                          >  SRR4302545.1817636/1‑94 (MQ=60)

                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                          >  SRR4302545.4908594/1‑94 (MQ=60)

                                                      CCTTATTTCTTAAGCTAAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAAAACGGAAGCT                                          >  SRR4302545.9875107/1‑94 (MQ=60)

                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                         <  SRR4302545.4031540/94‑1 (MQ=60)

                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                         >  SRR4302545.3006233/1‑94 (MQ=60)

                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGTCATCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGG                                        <  SRR4302545.1582193/94‑1 (MQ=60)

                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGATGGATGCTGCTTCAACACTGAAGCCGG                                        >  SRR4302545.9675152/1‑94 (MQ=60)

                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGG                                        <  SRR4302545.7979418/94‑1 (MQ=60)

                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGG                                        >  SRR4302545.3895797/1‑94 (MQ=60)

                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGG                                        >  SRR4302545.5981421/1‑94 (MQ=60)

                                                         TATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGA                                       <  SRR4302545.12546/94‑1 (MQ=60)

                                                         TATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGA                                       <  SRR4302545.4314344/94‑1 (MQ=60)

                                                         TATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGA                                       >  SRR4302545.4291858/1‑94 (MQ=60)

                                                         TATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGA                                       >  SRR4302545.612959/1‑94 (MQ=60)

                                                          ATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAA                                      >  SRR4302545.10477907/1‑94 (MQ=60)

                                                            TTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACA                                    >  SRR4302545.9715806/1‑94 (MQ=60)

                                                             TCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACAT                                   <  SRR4302545.7943001/94‑1 (MQ=60)

                                                              CTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATC                                  >  SRR4302545.4433986/1‑94 (MQ=60)

                                                              CTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATC                                  <  SRR4302545.3603037/94‑1 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 <  SRR4302545.4811910/94‑1 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 >  SRR4302545.5189401/1‑94 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 >  SRR4302545.6443558/1‑94 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 >  SRR4302545.4761132/1‑94 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 >  SRR4302545.1155416/1‑94 (MQ=60)

                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                                 >  SRR4302545.97215/1‑94 (MQ=60)

                                                                TAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTT                                <  SRR4302545.6519926/94‑1 (MQ=60)

                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                               >  SRR4302545.982947/1‑94 (MQ=60)

                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                               <  SRR4302545.4359973/94‑1 (MQ=60)

                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                               >  SRR4302545.667548/1‑94 (MQ=60)

                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                               <  SRR4302545.5396559/94‑1 (MQ=60)

                                                                  AGCTTAGCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                              <  SRR4302545.1205605/94‑1 (MQ=60)

                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGTGATGACCATCTGTGAAGGAAGTAGATGCAACACGGAAGCTGTAACATCTTCG                              >  SRR4302545.9699270/1‑94 (MQ=46)

                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                              <  SRR4302545.10185605/94‑1 (MQ=60)

                                                                   GCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGG                             <  SRR4302545.209867/94‑1 (MQ=60)

                                                                    CTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                            >  SRR4302545.4678743/1‑94 (MQ=60)

                                                                    CTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                            >  SRR4302545.8113702/1‑94 (MQ=60)

                                                                    CTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGACGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                            <  SRR4302545.1325293/94‑1 (MQ=60)

                                                                    CTTAACCGAGGGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTATCAGCATCGAAGGATGCAGCTGTAACACGGAAGCTGGAACATCTgagga                            >  SRR4302545.9001335/1‑89 (MQ=60)

                                                                    CTTAAACGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                            <  SRR4302545.5733830/94‑1 (MQ=60)

                                                                     TTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTA                           >  SRR4302545.173517/1‑94 (MQ=60)

                                                                       AACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAC                         <  SRR4302545.6754371/94‑1 (MQ=60)

                                                                        ACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACC                        <  SRR4302545.1551645/94‑1 (MQ=60)

                                                                         CCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCG                       <  SRR4302545.6000473/94‑1 (MQ=60)

                                                                         CCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCG                       <  SRR4302545.7513272/94‑1 (MQ=60)

                                                                          CGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGG                      >  SRR4302545.747612/1‑94 (MQ=60)

                                                                          CGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGG                      >  SRR4302545.3303532/1‑94 (MQ=60)

                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                     <  SRR4302545.8257923/94‑1 (MQ=60)

                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                     <  SRR4302545.1004698/94‑1 (MQ=60)

                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                     >  SRR4302545.1290191/1‑94 (MQ=60)

                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                     <  SRR4302545.7240242/94‑1 (MQ=60)

                                                                           GAGGGCTAATTCTGCGGCAGAGGCTTTATAAGCGCTTACCATCAGCGAAGGAAGCTGCTGCAACACGGAAGCTGGAATATCTTCGGTAGCCGGA                     >  SRR4302545.3197331/1‑94 (MQ=48)

                                                                            AGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAC                    >  SRR4302545.5132488/1‑94 (MQ=60)

                                                                            AGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAC                    <  SRR4302545.3134353/94‑1 (MQ=60)

                                                                             GTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACC                   <  SRR4302545.5864173/94‑1 (MQ=60)

                                                                              TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCT                  >  SRR4302545.110057/1‑94 (MQ=60)

                                                                              TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCT                  <  SRR4302545.3429531/94‑1 (MQ=60)

                                                                              TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCT                  >  SRR4302545.832307/1‑94 (MQ=60)

                                                                              TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCT                  <  SRR4302545.3705198/94‑1 (MQ=60)

                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT                 <  SRR4302545.6569790/94‑1 (MQ=60)

                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT                 >  SRR4302545.10374898/1‑94 (MQ=60)

                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT                 <  SRR4302545.6408272/94‑1 (MQ=60)

                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT                 <  SRR4302545.783698/94‑1 (MQ=60)

                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT                 <  SRR4302545.4398258/94‑1 (MQ=60)

                                                                               GCTAATGCTGCGGCAGCGGCTGTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCGTCGGTAACCGGACCTT                 <  SRR4302545.1129283/94‑1 (MQ=60)

                                                                                CTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTG                >  SRR4302545.1640695/1‑94 (MQ=60)

                                                                                CTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTG                >  SRR4302545.1929494/1‑94 (MQ=60)

                                                                                CTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTG                <  SRR4302545.253565/94‑1 (MQ=60)

                                                                                 TAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATTAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGC               >  SRR4302545.6885039/1‑94 (MQ=60)

                                                                                 TAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGC               >  SRR4302545.10670451/1‑94 (MQ=60)

                                                                                  AATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCA              <  SRR4302545.5157228/94‑1 (MQ=60)

                                                                                  AATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCA              >  SRR4302545.5915644/1‑94 (MQ=60)

                                                                                   ATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAG             >  SRR4302545.1558435/1‑94 (MQ=60)

                                                                                   ATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAG             <  SRR4302545.9061471/94‑1 (MQ=60)

                                                                                    TTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGA            >  SRR4302545.39901/1‑94 (MQ=60)

                                                                                    TTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGA            >  SRR4302545.2495859/1‑94 (MQ=60)

                                                                                     TCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAA           <  SRR4302545.8061195/94‑1 (MQ=60)

                                                                                     TCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAA           <  SRR4302545.6623772/94‑1 (MQ=60)

                                                                                      CTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAC          >  SRR4302545.9509043/1‑94 (MQ=60)

                                                                                       TGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA         >  SRR4302545.8276242/1‑94 (MQ=60)

                                                                                       TGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA         >  SRR4302545.10845282/1‑94 (MQ=60)

                                                                                        GCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT        <  SRR4302545.7189003/94‑1 (MQ=60)

                                                                                        GCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT        <  SRR4302545.4598196/94‑1 (MQ=60)

                                                                                         CGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATT       >  SRR4302545.1570374/1‑94 (MQ=60)

                                                                                         CGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATT       >  SRR4302545.1425720/1‑94 (MQ=60)

                                                                                         CGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATT       <  SRR4302545.4996325/94‑1 (MQ=60)

                                                                                         CGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATT       >  SRR4302545.6114665/1‑94 (MQ=60)

                                                                                          GGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT      <  SRR4302545.233117/94‑1 (MQ=60)

                                                                                          GGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT      <  SRR4302545.7569720/94‑1 (MQ=60)

                                                                                          GGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT      <  SRR4302545.5347522/94‑1 (MQ=60)

                                                                                          GGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT      >  SRR4302545.4672582/1‑94 (MQ=60)

                                                                                           GCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTT     <  SRR4302545.2367233/94‑1 (MQ=60)

                                                                                             G‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCA  >  SRR4302545.1240282/1‑94 (MQ=60)

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCA  >  NC_000913/3896231‑3896417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`