Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,896,324 +G coding (698/711 nt) b3718 ← putative isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,896,3241.G99.7% 2389.4 / NA 686V233A (GTG→GCG) b3718putative isomerase
Reads supporting (aligned to +/- strand):  ref base . (0/1);  major base G (355/328);  minor base T (1/1);  total (356/330)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 743 total aligned reads displayed.

TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT  >  NC_000913/3896231‑3896411
                                                                                              |                                                                                       
tttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                                                          >  1:6834338/1‑94 (MQ=255)
tttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                                                          <  1:4536699/94‑1 (MQ=255)
tttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                                                          >  2:5188563/1‑94 (MQ=255)
 ttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCag                                                                                         >  1:7845193/1‑93 (MQ=255)
 ttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCag                                                                                         <  1:4644463/94‑2 (MQ=255)
 ttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCag                                                                                         <  2:6639660/94‑2 (MQ=255)
   cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagcg                                                                                       >  2:823250/1‑91 (MQ=255)
    gTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagcgg                                                                                      >  1:5401124/1‑90 (MQ=255)
      aGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCt                                                                                    >  2:4671891/1‑94 (MQ=255)
       gTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCtt                                                                                   >  1:881790/1‑94 (MQ=255)
         tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                                                                 >  2:166206/1‑94 (MQ=255)
           tttAAATAATGAGGACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                                                               <  2:9106952/94‑1 (MQ=255)
            taaaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCa                                                                              <  2:2105461/92‑1 (MQ=255)
             tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAg                                                                             >  2:331746/1‑94 (MQ=255)
              aaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                                                            >  2:5925665/1‑94 (MQ=255)
              aaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                                                            <  2:4397038/94‑1 (MQ=255)
               aataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCg                                                                           >  1:7057381/1‑94 (MQ=255)
               aataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCg                                                                           <  2:7951252/94‑1 (MQ=255)
                ataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                                                          <  2:145198/94‑1 (MQ=255)
                 taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                                                         >  1:2538320/1‑94 (MQ=255)
                 taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                                                         >  1:1099768/1‑94 (MQ=255)
                 taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                                                         >  1:986478/1‑94 (MQ=255)
                  aatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAtt                                                                        <  2:6112919/94‑1 (MQ=255)
                   atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                                                       <  1:2867343/94‑1 (MQ=255)
                   atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                                                       <  2:6513894/94‑1 (MQ=255)
                    tGAGAACAGGCCGGAGCGTAATTAACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAc                                                                      >  1:9014162/1‑94 (MQ=255)
                     gagaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAcc                                                                     <  1:10396973/94‑1 (MQ=255)
                       gaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAt                                                                   <  1:9202352/94‑1 (MQ=255)
                       gaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAt                                                                   <  1:10045213/94‑1 (MQ=255)
                          cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                                                                >  2:9834309/1‑94 (MQ=255)
                          aaGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                                                                >  1:10237292/2‑94 (MQ=255)
                           aGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                                                               >  2:26292/1‑94 (MQ=255)
                           aGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                                                               >  2:10248756/1‑94 (MQ=255)
                           aGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                                                               <  1:8369291/94‑1 (MQ=255)
                            ggCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                                                              >  2:1006821/1‑94 (MQ=255)
                              ccGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGaa                                                            >  1:5772641/1‑94 (MQ=255)
                               cGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                                                           >  2:1925691/1‑94 (MQ=255)
                                 gAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGa                                                         >  2:4537585/1‑94 (MQ=255)
                                   gCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATg                                                       <  1:3325434/94‑1 (MQ=255)
                                     gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCa                                                     >  2:4830152/1‑94 (MQ=255)
                                     gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCa                                                     >  1:1724516/1‑94 (MQ=255)
                                      tAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAg                                                    <  1:1180972/94‑1 (MQ=255)
                                       aaTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                                                   <  2:8696375/94‑1 (MQ=255)
                                         ttCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTg                                                 <  2:3834087/94‑1 (MQ=255)
                                           cacacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                                               >  2:10463611/1‑94 (MQ=255)
                                           cacacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                                               <  1:3489365/94‑1 (MQ=255)
                                            acacaTCCGGCCTTATTTCTTAAGCTTAACCGAGAGCTAATTCTGAGGCAGCGGCTTTATCAGAGATTACCATCAGCGAAGGATGCAGCTGCaa                                              >  1:7709981/1‑94 (MQ=255)
                                              acaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAaca                                            <  1:796637/94‑1 (MQ=255)
                                              acaTCCGGCCTTATTTCTTAAGATTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAaca                                            >  1:1903044/1‑94 (MQ=255)
                                               caTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac                                           <  2:7690935/94‑1 (MQ=255)
                                                aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg                                          >  1:5888422/1‑94 (MQ=255)
                                                aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg                                          <  2:2415086/94‑1 (MQ=255)
                                                 tCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACgg                                         >  1:1518153/1‑94 (MQ=255)
                                                  ccGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCTGCTCTATCAGCGATTACCATCAGCGAATGATGCAGCTGCATCACGGa                                        >  1:9376532/1‑94 (MQ=255)
                                                  ccGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGa                                        >  2:6346946/1‑94 (MQ=255)
                                                   cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCCACACGGaa                                       >  1:81240/1‑94 (MQ=255)
                                                   cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaa                                       >  1:9628001/1‑94 (MQ=255)
                                                   cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaa                                       <  1:400245/94‑1 (MQ=255)
                                                   cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaa                                       >  1:561923/1‑94 (MQ=255)
                                                    ggCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAg                                      <  1:3186044/94‑1 (MQ=255)
                                                       cTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTg                                   <  2:3467297/94‑1 (MQ=255)
                                                        ttATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTgg                                  >  1:3801488/1‑94 (MQ=255)
                                                           tttCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAc                               <  2:2942957/94‑1 (MQ=255)
                                                            ttCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACa                              >  1:9438485/1‑94 (MQ=255)
                                                             tCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACAt                             <  2:10601059/94‑1 (MQ=255)
                                                              cTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATc                            >  1:4324932/1‑94 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaa                                       <  2:5494673/82‑1 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                           >  1:6272534/1‑94 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                           >  2:5632248/1‑94 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                           >  2:3579346/1‑94 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                           >  1:5060593/1‑94 (MQ=255)
                                                               ttAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                           >  1:748601/1‑94 (MQ=255)
                                                                 aaGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                         <  2:4193620/94‑1 (MQ=255)
                                                                 aaGCTTAACAGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGTAAGCTGGAACATCTTc                         <  1:1580981/94‑1 (MQ=255)
                                                                  aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCg                        <  2:8823337/94‑1 (MQ=255)
                                                                  aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCg                        >  1:7301194/1‑94 (MQ=255)
                                                                   gCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCgg                       <  1:205591/94‑1 (MQ=255)
                                                                    cTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGt                      >  1:3616009/1‑94 (MQ=255)
                                                                    cTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGACGCAGCTGCAACACGGAAGCTGGAACATCTTCGGt                      <  1:1296498/94‑1 (MQ=255)
                                                                     ttAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTa                     >  2:7839607/1‑94 (MQ=255)
                                                                       aaCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAc                   <  2:9246988/94‑1 (MQ=255)
                                                                        aCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAcc                  >  2:4083905/1‑94 (MQ=255)
                                                                          cGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCgg                <  2:2297877/94‑1 (MQ=255)
                                                                          cGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCgg                >  2:1222162/1‑94 (MQ=255)
                                                                           gAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGa               >  1:8521236/1‑94 (MQ=255)
                                                                            aGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAc              >  2:3255946/1‑94 (MQ=255)
                                                                            aGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAc              <  1:3059342/94‑1 (MQ=255)
                                                                              tGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCt            <  2:7493045/94‑1 (MQ=255)
                                                                                cTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTg          <  2:84586/94‑1 (MQ=255)
                                                                                cTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTg          >  1:6587988/1‑94 (MQ=255)
                                                                                cTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTg          <  2:954484/94‑1 (MQ=255)
                                                                                 tAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGc         >  1:4916237/1‑94 (MQ=255)
                                                                                   aTTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAg       >  1:4194897/1‑94 (MQ=255)
                                                                                   aTTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAg       >  2:5357152/1‑94 (MQ=255)
                                                                                    ttCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGa      <  2:7123389/94‑1 (MQ=255)
                                                                                    ttCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCCGCAACATCTTCGGTAACCGGACCTTGCAGa      >  1:2436813/1‑94 (MQ=255)
                                                                                     tCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGaa     <  1:6447486/94‑1 (MQ=255)
                                                                                      cTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAc    >  2:680276/1‑94 (MQ=255)
                                                                                      cTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAc    <  2:2841122/94‑1 (MQ=255)
                                                                                       tGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACa   >  1:10534936/1‑94 (MQ=255)
                                                                                              |                                                                                       
TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT  >  NC_000913/3896231‑3896411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 424 total aligned reads displayed.
ACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  >  NC_000913/3907938‑3908124
                                                                                             |                                                                                             
ACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTC                                                                                               <  SRR4302545.4119007/94‑1 (MQ=60)
 CAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCA                                                                                              <  SRR4302545.8284155/94‑1 (MQ=60)
 CAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCA                                                                                              <  SRR4302545.120120/94‑1 (MQ=60)
 CAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCA                                                                                              <  SRR4302545.4559414/94‑1 (MQ=60)
  AATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCAC                                                                                             <  SRR4302545.1492833/94‑1 (MQ=60)
  AATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCAC                                                                                             >  SRR4302545.8485919/1‑94 (MQ=60)
  AATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCAC                                                                                             <  SRR4302545.9603050/94‑1 (MQ=60)
   ATCAGCGCCGCCTGTTTTACCAGCCCGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCCTAAGTCACT                                                                                            >  SRR4302545.7282415/1‑94 (MQ=60)
   ATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACT                                                                                            >  SRR4302545.1249845/1‑94 (MQ=60)
   ATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACT                                                                                            <  SRR4302545.5877040/94‑1 (MQ=60)
    TCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTC                                                                                           >  SRR4302545.3770824/1‑94 (MQ=60)
    TCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTC                                                                                           <  SRR4302545.5682803/94‑1 (MQ=60)
    TCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTC                                                                                           >  SRR4302545.500351/1‑94 (MQ=60)
     CAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCT                                                                                          <  SRR4302545.3879633/94‑1 (MQ=60)
     CAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCT                                                                                          <  SRR4302545.3276294/94‑1 (MQ=60)
     CAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCT                                                                                          >  SRR4302545.763885/1‑94 (MQ=60)
     CAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCT                                                                                          >  SRR4302545.4838429/1‑94 (MQ=60)
     CAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCT                                                                                          >  SRR4302545.8987094/1‑94 (MQ=60)
      AGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTT                                                                                         <  SRR4302545.2445702/94‑1 (MQ=60)
      AGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTT                                                                                         <  SRR4302545.7079700/94‑1 (MQ=60)
        CGGCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCGCTCTTCA                                                                                       <  SRR4302545.2035021/94‑1 (MQ=60)
         GCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCTCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAG                                                                                      <  SRR4302545.3810154/94‑1 (MQ=60)
         GCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAG                                                                                      >  SRR4302545.7655744/1‑94 (MQ=60)
         GCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAG                                                                                      >  SRR4302545.4448076/1‑94 (MQ=60)
          CCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGT                                                                                     >  SRR4302545.6328222/1‑94 (MQ=60)
           CGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTT                                                                                    >  SRR4302545.4252007/1‑94 (MQ=60)
           CGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTT                                                                                    >  SRR4302545.5306727/1‑94 (MQ=60)
           CGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTT                                                                                    <  SRR4302545.1641972/94‑1 (MQ=60)
           CGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTT                                                                                    <  SRR4302545.3996210/94‑1 (MQ=60)
              CAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAA                                                                                 >  SRR4302545.10446865/1‑94 (MQ=60)
              CAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAA                                                                                 >  SRR4302545.9262210/1‑94 (MQ=60)
              CAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAA                                                                                 <  SRR4302545.1725515/94‑1 (MQ=60)
               AGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAAC                                                                                <  SRR4302545.2032013/94‑1 (MQ=60)
               AGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAAC                                                                                >  SRR4302545.7566856/1‑94 (MQ=60)
               AGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAAC                                                                                >  SRR4302545.2673411/1‑94 (MQ=60)
                GTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACG                                                                               <  SRR4302545.10570718/94‑1 (MQ=60)
                GTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACG                                                                               >  SRR4302545.7523102/1‑94 (MQ=60)
                GTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACG                                                                               <  SRR4302545.444511/94‑1 (MQ=60)
                 TTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGC                                                                              <  SRR4302545.1996534/94‑1 (MQ=60)
                   TTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCGCTCTTCAGTTAAACGCGT                                                                            <  SRR4302545.517644/94‑1 (MQ=60)
                   TTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGT                                                                            <  SRR4302545.973780/94‑1 (MQ=60)
                   TTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGT                                                                            >  SRR4302545.10014471/1‑94 (MQ=60)
                   TTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGT                                                                            <  SRR4302545.9093549/94‑1 (MQ=60)
                   TTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGT                                                                            <  SRR4302545.8925848/94‑1 (MQ=60)
                    TACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTT                                                                           <  SRR4302545.10243789/94‑1 (MQ=60)
                    TACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTT                                                                           <  SRR4302545.8896274/94‑1 (MQ=60)
                    TACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTT                                                                           >  SRR4302545.8412120/1‑94 (MQ=60)
                      CCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTA                                                                         <  SRR4302545.1800932/94‑1 (MQ=60)
                      CCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTA                                                                         >  SRR4302545.7855674/1‑94 (MQ=60)
                      CCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTA                                                                         >  SRR4302545.3422145/1‑94 (MQ=60)
                       CAGCACGCTGAAAATTATGTCGCCCTTTTTTCCCGGGGGGGTTAAAGCAGGCTTTGTTGCAGCCATAAGTCACCCTTCAGTTAAACGCGTTTTC                                                                        >  SRR4302545.4714936/1‑94 (MQ=60)
                       CAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTTTACGCGTTTAC                                                                        >  SRR4302545.9961160/1‑94 (MQ=60)
                        AGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACA                                                                       <  SRR4302545.9432234/94‑1 (MQ=60)
                         GCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAA                                                                      <  SRR4302545.5040196/94‑1 (MQ=60)
                         GCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAA                                                                      <  SRR4302545.3757112/94‑1 (MQ=60)
                          CACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAA                                                                     <  SRR4302545.222406/94‑1 (MQ=60)
                          CACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAA                                                                     <  SRR4302545.1088510/94‑1 (MQ=60)
                            CGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGT                                                                   <  SRR4302545.5532053/94‑1 (MQ=60)
                             GCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTC                                                                  <  SRR4302545.2501499/94‑1 (MQ=60)
                             GCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTC                                                                  <  SRR4302545.10912856/94‑1 (MQ=60)
                             GCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTC                                                                  >  SRR4302545.4386622/1‑94 (MQ=60)
                             GCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTAAAAAGTC                                                                  >  SRR4302545.7570856/1‑94 (MQ=60)
                              CTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCA                                                                 >  SRR4302545.507119/1‑94 (MQ=60)
                              CTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCA                                                                 <  SRR4302545.5821939/94‑1 (MQ=60)
                               TGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTACACGCGTTTACACAGTCAT                                                                >  SRR4302545.2412447/1‑94 (MQ=60)
                               TGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCAT                                                                >  SRR4302545.9720675/1‑94 (MQ=60)
                                GAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATT                                                               <  SRR4302545.9550108/94‑1 (MQ=60)
                                  AAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTT                                                             >  SRR4302545.1350194/1‑94 (MQ=60)
                                  AAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTT                                                             <  SRR4302545.4203843/94‑1 (MQ=60)
                                  AAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTT                                                             >  SRR4302545.8318090/1‑94 (MQ=60)
                                   AATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTG                                                            <  SRR4302545.7112151/94‑1 (MQ=60)
                                   AATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTG                                                            >  SRR4302545.6612681/1‑94 (MQ=60)
                                   AATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTG                                                            <  SRR4302545.5868985/94‑1 (MQ=60)
                                   AATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTG                                                            <  SRR4302545.5250596/94‑1 (MQ=60)
                                   AATTATCTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTCATTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTG                                                            <  SRR4302545.6011203/94‑1 (MQ=60)
                                    ATTATGTCTCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTATAAAGTCATTTTGT                                                           >  SRR4302545.7873162/1‑94 (MQ=60)
                                    ATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGT                                                           <  SRR4302545.5505013/94‑1 (MQ=60)
                                    ATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGT                                                           >  SRR4302545.8990510/1‑94 (MQ=60)
                                     TTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTTTA                                                          >  SRR4302545.6511539/1‑94 (MQ=60)
                                     TTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTA                                                          >  SRR4302545.3229596/1‑94 (MQ=60)
                                      TATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAA                                                         >  SRR4302545.3814715/1‑94 (MQ=60)
                                      TATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAA                                                         <  SRR4302545.854061/94‑1 (MQ=60)
                                       ATGTCGCCCTTTTTCCCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAT                                                        <  SRR4302545.3311496/94‑1 (MQ=60)
                                       ATGTCGCCCTTTTTACCCGGTGGTTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAT                                                        <  SRR4302545.5979361/94‑1 (MQ=60)
                                       ATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAT                                                        >  SRR4302545.4722901/1‑94 (MQ=60)
                                       ATGTCGCCCGTTTTGCACGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCTCTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAT                                                        <  SRR4302545.7581631/94‑1 (MQ=60)
                                        TGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATG                                                       >  SRR4302545.10523340/1‑94 (MQ=60)
                                        TGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATG                                                       >  SRR4302545.6735588/1‑94 (MQ=60)
                                        TGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATG                                                       <  SRR4302545.59069/94‑1 (MQ=60)
                                         GTCCCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGC                                                      <  SRR4302545.2747882/94‑1 (MQ=60)
                                          TCGCCCTTTTTACCCGGTGGGTTAAAAGCATGCTTGGTGGCAGCCATAAGTCACTCTTCAGTTAAGCGCGTTTACAAAGTCATTTTGTAATGCC                                                     <  SRR4302545.4912535/94‑1 (MQ=60)
                                          TCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCC                                                     <  SRR4302545.2170232/94‑1 (MQ=60)
                                          TCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCC                                                     >  SRR4302545.3593903/1‑94 (MQ=60)
                                          TCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCC                                                     >  SRR4302545.8249031/1‑94 (MQ=60)
                                          TCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCC                                                     <  SRR4302545.2314343/94‑1 (MQ=60)
                                           CGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCG                                                    >  SRR4302545.624324/1‑94 (MQ=60)
                                           CGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCG                                                    >  SRR4302545.9451878/1‑94 (MQ=60)
                                           CGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCG                                                    >  SRR4302545.8044847/1‑94 (MQ=60)
                                            GCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGG                                                   >  SRR4302545.2785349/1‑94 (MQ=60)
                                            GCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGCTTACAAAGTTATTATGTAATGCCGG                                                   >  SRR4302545.247036/1‑94 (MQ=60)
                                             CCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGA                                                  >  SRR4302545.7317534/1‑94 (MQ=60)
                                             CCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGA                                                  >  SRR4302545.10388453/1‑94 (MQ=60)
                                             CCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGA                                                  >  SRR4302545.9062776/1‑94 (MQ=60)
                                             CCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGA                                                  <  SRR4302545.8376491/94‑1 (MQ=60)
                                              CCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGAT                                                 >  SRR4302545.2681765/1‑94 (MQ=60)
                                              CCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGAT                                                 >  SRR4302545.5884636/1‑94 (MQ=60)
                                               CTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATG                                                >  SRR4302545.8776642/1‑94 (MQ=60)
                                               CTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGCTTACAAATTCAATTTGTATTGCCAGATG                                                >  SRR4302545.7044177/1‑94 (MQ=60)
                                                TTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGC                                               <  SRR4302545.10922884/94‑1 (MQ=60)
                                                TTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGC                                               >  SRR4302545.4122452/1‑94 (MQ=60)
                                                TTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGC                                               >  SRR4302545.9915547/1‑94 (MQ=60)
                                                 TTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCG                                              <  SRR4302545.8012734/94‑1 (MQ=60)
                                                  TTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGG                                             >  SRR4302545.8248131/1‑94 (MQ=60)
                                                  TTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGG                                             >  SRR4302545.8254606/1‑94 (MQ=60)
                                                  TTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGG                                             >  SRR4302545.10029672/1‑94 (MQ=60)
                                                   TTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTTTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGC                                            <  SRR4302545.2879/94‑1 (MQ=60)
                                                    TACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCG                                           <  SRR4302545.7742359/94‑1 (MQ=60)
                                                    TACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCG                                           >  SRR4302545.749530/1‑94 (MQ=60)
                                                    TACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGAG                                           >  SRR4302545.7131319/1‑94 (MQ=60)
                                                     ACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGT                                          >  SRR4302545.7951656/1‑94 (MQ=60)
                                                       CCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAA                                        >  SRR4302545.221750/1‑94 (MQ=60)
                                                       CCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAA                                        >  SRR4302545.8656503/1‑94 (MQ=60)
                                                        CGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAA                                       >  SRR4302545.6407287/1‑94 (MQ=60)
                                                        CGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAA                                       <  SRR4302545.8466943/94‑1 (MQ=60)
                                                         GGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAA                                      >  SRR4302545.5760109/1‑94 (MQ=60)
                                                         GGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAA                                      >  SRR4302545.6683332/1‑94 (MQ=60)
                                                          GTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAAC                                     <  SRR4302545.9612892/94‑1 (MQ=60)
                                                           TGGTTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    <  SRR4302545.905138/94‑1 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGGTGCGGCGTAAAACA                                    >  SRR4302545.2159347/1‑94 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    <  SRR4302545.445954/94‑1 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    <  SRR4302545.10730572/94‑1 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    <  SRR4302545.5572273/94‑1 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    >  SRR4302545.1410529/1‑94 (MQ=60)
                                                           TGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGGCATTTTGTAATGCCGGATGCGGCGTAAAACA                                    <  SRR4302545.1812856/94‑1 (MQ=60)
                                                             GGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACC                                  >  SRR4302545.1068044/1‑94 (MQ=60)
                                                             GGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACC                                  <  SRR4302545.964703/94‑1 (MQ=60)
                                                             GGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACC                                  <  SRR4302545.4623839/94‑1 (MQ=60)
                                                              GTTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCG                                 >  SRR4302545.2264419/1‑94 (MQ=60)
                                                               TTAAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGT                                <  SRR4302545.10247687/94‑1 (MQ=60)
                                                                 AAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAC                              <  SRR4302545.1741036/94‑1 (MQ=60)
                                                                 AAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAC                              >  SRR4302545.1331002/1‑94 (MQ=60)
                                                                 AAAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAC                              <  SRR4302545.9878106/94‑1 (MQ=60)
                                                                  AAAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACC                             >  SRR4302545.7202060/1‑94 (MQ=60)
                                                                   AAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCC                            <  SRR4302545.1435108/94‑1 (MQ=60)
                                                                   AAGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCC                            >  SRR4302545.8848882/1‑94 (MQ=60)
                                                                    AGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCG                           <  SRR4302545.6438283/94‑1 (MQ=60)
                                                                    AGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCG                           >  SRR4302545.6358187/1‑94 (MQ=60)
                                                                    AGCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCG                           <  SRR4302545.4661717/94‑1 (MQ=60)
                                                                     GCAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGG                          <  SRR4302545.5417976/94‑1 (MQ=60)
                                                                      CAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGC                         >  SRR4302545.8631049/1‑94 (MQ=60)
                                                                      CAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGC                         >  SRR4302545.8189109/1‑94 (MQ=60)
                                                                      CAGGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGC                         >  SRR4302545.5547519/1‑94 (MQ=60)
                                                                        GGCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCT                       <  SRR4302545.10167368/94‑1 (MQ=60)
                                                                         GCTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTG                      <  SRR4302545.3120214/94‑1 (MQ=60)
                                                                          CTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGG                     >  SRR4302545.3957973/1‑94 (MQ=60)
                                                                          CTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGG                     >  SRR4302545.5805817/1‑94 (MQ=60)
                                                                          CTTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGG                     >  SRR4302545.1917455/1‑94 (MQ=60)
                                                                          CTTGGTTGCAGCCATAACTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGG                     <  SRR4302545.2954838/94‑1 (MQ=60)
                                                                           TTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGA                    >  SRR4302545.10126303/1‑94 (MQ=60)
                                                                           TTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGA                    >  SRR4302545.10832563/1‑94 (MQ=60)
                                                                           TTGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGA                    <  SRR4302545.1321896/94‑1 (MQ=60)
                                                                            TGGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAG                   <  SRR4302545.6917025/94‑1 (MQ=60)
                                                                             GGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGT                  <  SRR4302545.9872615/94‑1 (MQ=60)
                                                                             GGTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGT                  >  SRR4302545.3666973/1‑94 (MQ=60)
                                                                              GTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTT                 <  SRR4302545.10939632/94‑1 (MQ=60)
                                                                              GTTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTT                 <  SRR4302545.6556461/94‑1 (MQ=60)
                                                                               GTGCAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTT                <  SRR4302545.10660166/94‑1 (MQ=60)
                                                                                  CAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTAT             >  SRR4302545.3247682/1‑94 (MQ=60)
                                                                                  CAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTAT             <  SRR4302545.921878/94‑1 (MQ=60)
                                                                                  CAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTAT             <  SRR4302545.3189884/94‑1 (MQ=60)
                                                                                  CAGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTAT             >  SRR4302545.2622899/1‑94 (MQ=60)
                                                                                   AGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATT            >  SRR4302545.10347669/1‑94 (MQ=60)
                                                                                   AGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATT            <  SRR4302545.5457785/94‑1 (MQ=60)
                                                                                   AGCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATT            >  SRR4302545.10640308/1‑94 (MQ=60)
                                                                                    GCCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTA           <  SRR4302545.4160370/94‑1 (MQ=60)
                                                                                     CCATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAG          <  SRR4302545.409768/94‑1 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         <  SRR4302545.5785091/94‑1 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         >  SRR4302545.4024834/1‑94 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         >  SRR4302545.9101999/1‑94 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         <  SRR4302545.9855657/94‑1 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         >  SRR4302545.2129910/1‑94 (MQ=60)
                                                                                      CATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGT         >  SRR4302545.7618442/1‑94 (MQ=60)
                                                                                       ATAAGTCACTCTTCAGTTGAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTA        <  SRR4302545.7729417/94‑1 (MQ=60)
                                                                                       ATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTA        >  SRR4302545.525075/1‑94 (MQ=60)
                                                                                       ATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTA        >  SRR4302545.10750893/1‑94 (MQ=60)
                                                                                       ATAAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTA        >  SRR4302545.10900152/1‑94 (MQ=60)
                                                                                         AAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACA      <  SRR4302545.146316/94‑1 (MQ=60)
                                                                                         AAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACA      <  SRR4302545.7387860/94‑1 (MQ=60)
                                                                                         AAGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACA      >  SRR4302545.969120/1‑94 (MQ=60)
                                                                                         AAGTCACTCTTCAGTTAAACGCGTTTACAAAGACATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACA      >  SRR4302545.10363208/1‑94 (MQ=60)
                                                                                          AGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAG     <  SRR4302545.664359/94‑1 (MQ=60)
                                                                                          AGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAG     <  SRR4302545.897897/94‑1 (MQ=60)
                                                                                          AGTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAG     >  SRR4302545.6810965/1‑94 (MQ=60)
                                                                                           GTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGC    >  SRR4302545.4422120/1‑94 (MQ=60)
                                                                                           GTCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGC    <  SRR4302545.8054417/94‑1 (MQ=60)
                                                                                            TCACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCG   <  SRR4302545.7692568/94‑1 (MQ=60)
                                                                                             CACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  <  SRR4302545.6505856/94‑1 (MQ=60)
                                                                                             CACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  <  SRR4302545.8509984/94‑1 (MQ=60)
                                                                                             CACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  >  SRR4302545.3907224/1‑94 (MQ=60)
                                                                                             CACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  <  SRR4302545.1130863/94‑1 (MQ=60)
                                                                                             |                                                                                             
ACAATCAGCGCCGCCAGTTTTACCAGCACGCTGAAAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGG  >  NC_000913/3907938‑3908124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑