Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,876,595 |
G→C |
P385A (CCG→GCG) |
gyrB ← |
DNA gyrase subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,876,595 | 0 | G | C | 100.0%
| 527.0
/ NA
| 153 | P385A (CCG→GCG) | gyrB | DNA gyrase subunit B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (28/125); total (28/125) |
Only 100 of 199 total aligned reads displayed.
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGG‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
ggATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACGCCGgcggcgcgg‑c > 1:3961129/1‑93 (MQ=255)
gATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACGCGCGCGGCgcgc‑cg > 2:6104828/1‑93 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCCCTTCACCCGCGCGGCGcgc‑cgcc > 1:5198007/1‑92 (MQ=255)
cgcgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCtt < 2:1572541/93‑1 (MQ=255)
gcgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTc < 2:4814934/93‑1 (MQ=255)
cgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCTC‑CGCTTca < 2:305448/93‑1 (MQ=255)
gTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcac < 1:1282115/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacg < 2:6015087/93‑1 (MQ=255)
tCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCCCGCGCGCGGCGGCC‑CGCTTcacgg > 1:1624493/1‑93 (MQ=255)
tCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgg < 2:5153831/93‑1 (MQ=255)
tGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGTC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgggca < 2:4681270/93‑1 (MQ=255)
tGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgggca < 2:2181823/93‑1 (MQ=255)
ggCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACGCGCGCGGCGCGGCCGCTCcccgggcc > 1:106266/1‑92 (MQ=255)
gCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgggcacg < 1:5118288/93‑1 (MQ=255)
gCAGTCGGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTCACGGC‑GGGTCATTTCACGCGCGCGACGCTC‑CGCTTcacgggcacg < 2:1496314/93‑1 (MQ=255)
cAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgggcacgg < 1:672868/93‑1 (MQ=255)
cAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTcacgggcacgg < 2:6210016/93‑1 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACCCGCGCGGCGCGC‑CGCCTcacgggcccgggg > 2:2684802/1‑92 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTAAGCGCGCGACGCGC‑CGCTTCacgggcccgggc > 2:4627848/1‑93 (MQ=255)
tCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTCACGCGCGCGGCGCGC‑CCCTTcacgggcacggggg > 2:2591496/1‑91 (MQ=255)
tGCCAGTTTGCGCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGGCGCGC‑CGCTTCACGGGCACGGgcagc < 2:3425292/93‑1 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGGCTTTCACGCGCGCGGCGCGC‑CGCCTCTCGGGCACGGgcagc > 1:1892729/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCCGTTATCGCGGGTGGCGCGG‑CGCTTCTCCGGGACGGgccgc > 2:4138981/1‑93 (MQ=255)
gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGgcagca < 1:4704265/93‑1 (MQ=255)
gCCAGTATGACCGGCAGGCCCGCTAAGTCGAGCACACCTTGACTGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCGCGGGCACGGgcagca < 2:6138979/93‑1 (MQ=255)
ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCAt < 1:114710/93‑1 (MQ=255)
cAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTCACGCGCGCGACGCGC‑CGCTTCACCGGCACGGGGAGCATc > 1:1939832/1‑93 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTCACCCGCCCGGCGCGC‑CGCCTCCCCGGCACGGGCCGCAACg > 2:4593511/1‑93 (MQ=255)
gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAAt < 1:3161502/93‑1 (MQ=255)
cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGCCTTTAAC‑CGCGCGGAGCGG‑CGCGTTCCGGGCCCGGGCCGCCTCCATAAtt > 2:6055125/1‑93 (MQ=255)
ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAAttt < 1:5352059/93‑1 (MQ=255)
cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTCACGCGCGCGGCGCGC‑CGCTTCCCGGGCACGGGCAGCATCGATAAtttt > 1:3734088/1‑93 (MQ=255)
cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTCACGCCCGCGGCGCGC‑CGCCTCACGGGGACCGGGCGCACCCATAAtttt > 2:124762/1‑93 (MQ=255)
ggCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTGATTTTCCGCGCGCGGCGCGC‑CGCTTCTCGGGGCCCGGGAGCATCGAGAAttttt > 2:27970/1‑92 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACGCGCGCGGCGCGC‑CGCTTCACGGGCACGGGGAGCATCGATAAttttttca > 2:5090261/1‑89 (MQ=255)
ggCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCaa < 1:4499192/93‑1 (MQ=255)
cccGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAcc < 1:6088513/93‑1 (MQ=255)
ctgCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCa < 2:1789609/91‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCa < 2:203205/93‑1 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGa < 1:4224485/93‑1 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGa < 1:3397229/93‑1 (MQ=255)
tAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCTCGCGCGCGACGCGG‑CGCTTCACCGGGACGGGCAGCATCGAGAATTTTTCCAAACACGAt > 2:4512004/1‑93 (MQ=255)
tAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAt < 1:1524866/93‑1 (MQ=255)
tAAGTCGAGCGCACCTTTACGGC‑GGGGCATTTTACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTTCCAACCCCGAt > 2:3161488/1‑93 (MQ=255)
aaGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt < 2:4459318/93‑1 (MQ=255)
aaGTAGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt < 1:4884566/93‑1 (MQ=255)
gTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtttt < 1:3210700/93‑1 (MQ=255)
gAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCGCGATTTTcgc < 1:6054828/93‑1 (MQ=255)
gAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 1:6402077/93‑1 (MQ=255)
gAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 2:2163926/93‑1 (MQ=255)
gAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc < 1:6111157/93‑1 (MQ=255)
cgcACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc < 1:2448066/93‑1 (MQ=255)
cgcACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc > 1:2429570/1‑93 (MQ=255)
aCCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGt < 1:3132363/93‑1 (MQ=255)
aCCTTTACGGC‑GGGGCATTTCACGCGCGCGACGGGG‑CGCTTTACGGGGGCGGGCAGCACCGATAATTTTGGCCAACAAGATATTCGCGTCggg > 2:583833/1‑92 (MQ=255)
ccTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 2:1057062/93‑1 (MQ=255)
ccTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:460823/93‑1 (MQ=255)
tttACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg < 2:2343287/93‑1 (MQ=255)
ttACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 2:2910617/93‑1 (MQ=255)
tACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 2:2223975/93‑1 (MQ=255)
tACGGC‑GGGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGt < 2:4404824/93‑1 (MQ=255)
tACGGC‑GGGGCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGGCAACCACGATTTTTGCGGCGGTTgggg > 2:506713/1‑92 (MQ=255)
tcggc‑ggGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtt < 2:4357332/92‑1 (MQ=255)
ggc‑ggGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt > 1:3886955/1‑93 (MQ=255)
gc‑ggGTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGGTTTc > 2:3372936/1‑93 (MQ=255)
ggTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcag > 1:4409654/1‑93 (MQ=255)
gTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 2:139710/93‑1 (MQ=255)
gTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc > 1:4565749/1‑93 (MQ=255)
gTCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 2:2469860/93‑1 (MQ=255)
tCATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:4358677/93‑1 (MQ=255)
gcATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:5048774/92‑1 (MQ=255)
cATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 1:5679410/93‑1 (MQ=255)
cATTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 1:571368/93‑1 (MQ=255)
cATGTCTCGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagcag < 1:2196914/93‑1 (MQ=255)
aTTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAgg > 1:5233917/1‑93 (MQ=255)
aTTTCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAgg < 1:1539831/93‑1 (MQ=255)
ttCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTa > 2:3299245/1‑93 (MQ=255)
ttCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTa < 1:1735335/93‑1 (MQ=255)
tCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 1:2553030/93‑1 (MQ=255)
tCACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAt < 1:5797792/93‑1 (MQ=255)
cACGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt < 2:536433/93‑1 (MQ=255)
ccgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 2:664983/92‑1 (MQ=255)
aCGCGCGCGACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 2:3037225/93‑1 (MQ=255)
cgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 2:807349/93‑1 (MQ=255)
cgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 1:1448944/93‑1 (MQ=255)
cgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt > 1:3865470/1‑93 (MQ=255)
cgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 1:3594060/93‑1 (MQ=255)
cgcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTGTTCCAGCATGTATTCt > 1:5480746/1‑93 (MQ=255)
gcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTg < 2:6346342/93‑1 (MQ=255)
gcgcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTg > 2:2532201/1‑93 (MQ=255)
gcgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc < 1:3006273/93‑1 (MQ=255)
cgcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGTca > 2:91550/1‑93 (MQ=255)
gcgACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcag > 1:884794/1‑93 (MQ=255)
gACGCGC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGTcagca > 2:393015/1‑93 (MQ=255)
cgcgC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 2:5580278/93‑1 (MQ=255)
cgcgC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 1:1354/93‑1 (MQ=255)
cgcgC‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 2:288731/93‑1 (MQ=255)
cgcgC‑CGCCTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 1:365715/93‑1 (MQ=255)
gcgc‑cgCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTTGGTTTTCCAGCAGGTATTCTGCCAGCAgtt < 2:3644264/93‑1 (MQ=255)
gcgc‑cgCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgtt < 1:4140350/93‑1 (MQ=255)
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGC‑GGGTCATTTCACGCGCGCGACGCGG‑CGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGG‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876503‑3876688
|
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑C < SRR4302537.2063105/94‑1 (MQ=60)
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCCGGCGGCGCGG‑‑C > SRR4302537.3988839/1‑94 (MQ=60)
ATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCTGGTCATTTCACGCGCGCGACGCGC‑‑CGCT > SRR4302537.2219528/1‑94 (MQ=60)
GCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCA < SRR4302537.1281777/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACG < SRR4302537.1291027/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACG < SRR4302537.1656670/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACG < SRR4302537.1588282/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACG < SRR4302537.4022029/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCCCGCGCGCG‑‑GCGGCCCGCTTCACGG > SRR4302537.1635858/1‑94 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGG < SRR4302537.4524736/94‑1 (MQ=60)
TCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGG < SRR4302537.1437515/94‑1 (MQ=60)
TGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCAC < SRR4302537.966430/94‑1 (MQ=60)
TGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGG‑‑Ccgctccccgggcc > SRR4302537.107036/1‑81 (MQ=60)
GCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGG < SRR4302537.5153559/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGG < SRR4302537.1949888/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGG < SRR4302537.677474/94‑1 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGC < SRR4302537.36971/94‑1 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGC‑‑CGCTTCACGGGCACGGGC > SRR4302537.669515/1‑94 (MQ=60)
TCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAG < SRR4302537.1543490/94‑1 (MQ=60)
CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGCTTTCACGCGCGCGGCGCGC‑‑CGCCTCTCGGGCACGGGCAGC > SRR4302537.1905885/1‑94 (MQ=60)
GCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCAT < SRR4302537.4736807/94‑1 (MQ=60)
GCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCAT < SRR4302537.3669062/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATC < SRR4302537.4567922/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATC < SRR4302537.115545/94‑1 (MQ=60)
CCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGC‑‑CGCTTCACCGGCACGGGGAGCATC > SRR4302537.1953322/1‑94 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGCCGCGC‑‑CGCTTCACGGGCACCGGCAGCCTCG > SRR4302537.4364502/1‑94 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGC‑‑CGCTTCACCGGCACCGGGAGGATCGA > SRR4302537.4227329/1‑94 (MQ=60)
GTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT < SRR4302537.6145301/94‑1 (MQ=60)
TTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑A < SRR4302537.5771158/94‑1 (MQ=60)
TTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCGCGCGCGGAGCGC‑‑CGCTTCACGGGCCCGGGCAGCATCGCT‑A > SRR4302537.5122815/1‑94 (MQ=60)
TGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGC‑‑CGCCTCCCCGGCCCGGGCAGCCTCGAT‑AAT > SRR4302537.1294653/1‑94 (MQ=53)
GCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATT < SRR4302537.3183694/94‑1 (MQ=60)
GCCCGGCAGGCCCGCTAAGCCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATT < SRR4302537.5739641/94‑1 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGACGCGC‑‑CGCTTCACCGGCACGGGCAGCATCGAT‑CATTTT > SRR4302537.3049735/1‑94 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTT < SRR4302537.187580/94‑1 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTT < SRR4302537.5388721/94‑1 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGC‑‑CGCTTCCCGGGCACGGGCAGCATCGAT‑AATTTT > SRR4302537.3760317/1‑94 (MQ=60)
CGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCATTCTCCCGCGCGACGAGC‑‑CGCTTCACGGGCACGGGGAGCATCGATAAATTTT > SRR4302537.6120161/1‑94 (MQ=53)
CAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGC‑‑CGCCTCACGGGCACGGGCAGCATCGAG‑AATTTTTCCA > SRR4302537.4630342/1‑94 (MQ=60)
GGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAAC < SRR4302537.4530309/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCA < SRR4302537.506586/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCA < SRR4302537.6130340/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGGGGTTTTTCGCGCCGGACGCGG‑‑CGCTGCACGGGGACGGGCAGCATCGAG‑AATTTTGCCAACCAC > SRR4302537.5633128/1‑94 (MQ=42)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGC‑‑CGCTTCACCGGCACGGGCAGCATCGAT‑AATTTTGCCAACCAC > SRR4302537.3155812/1‑94 (MQ=60)
CCGCTAAGCCGACCGCACCTTTACGGCGGGTCATTTCACGCGCTCGACGCAC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTTCCAACCAC < SRR4302537.5201698/94‑1 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGCCGCGC‑‑CGCTTCCCCGGCGTGGGCAGCATCGAT‑AATTTTGTCAACCACG > SRR4302537.1749190/1‑94 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGGT‑AATTTTGCCAACCACG > SRR4302537.4411841/1‑94 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGAT < SRR4302537.3421289/94‑1 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGAT < SRR4302537.4253911/94‑1 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTTCCAACCACGAT > SRR4302537.5929703/1‑94 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGC‑‑CGCTTCACCGGCACGGGCAGCATCGAT‑AATTTTGTCAACCACGAT > SRR4302537.1537536/1‑94 (MQ=60)
TAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATT < SRR4302537.1535517/94‑1 (MQ=60)
TAAGTCGAGCGCACCTTTACAGCGGATCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATT < SRR4302537.2818644/94‑1 (MQ=60)
AAGTAGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTT < SRR4302537.4918298/94‑1 (MQ=60)
GTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTC < SRR4302537.1483304/94‑1 (MQ=60)
GTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTC < SRR4302537.3233282/94‑1 (MQ=60)
TCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCG < SRR4302537.3893452/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCGCGATTTTCGCG < SRR4302537.6096420/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCG < SRR4302537.6153153/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCG < SRR4302537.6445656/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGC‑‑CGCCTCACGGGCACGGGCCGCATCGAT‑AATTTTTTCAACCACGATTTTTGCG > SRR4302537.153202/1‑94 (MQ=60)
AGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTTCCAACCACGATTTTCGCGT > SRR4302537.4792223/1‑94 (MQ=60)
GCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTC < SRR4302537.3782523/94‑1 (MQ=60)
GCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTC > SRR4302537.2446689/1‑94 (MQ=60)
CGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCG < SRR4302537.2465288/94‑1 (MQ=60)
GCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCCCGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTTGCGGCGG > SRR4302537.3402660/1‑94 (MQ=60)
GCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGG < SRR4302537.4696545/94‑1 (MQ=60)
CACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGT < SRR4302537.3176611/94‑1 (MQ=60)
ACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTT < SRR4302537.3154342/94‑1 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCTCGTCGGTTG > SRR4302537.395442/1‑94 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTG < SRR4302537.463995/94‑1 (MQ=60)
TTTGCGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCATCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGG < SRR4302537.3938168/94‑1 (MQ=60)
ACGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTT < SRR4302537.560036/94‑1 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTT > SRR4302537.2463320/1‑94 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTT > SRR4302537.5848021/1‑94 (MQ=60)
CGGCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTT > SRR4302537.3914143/1‑94 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302537.3223321/94‑1 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302537.5436205/94‑1 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG > SRR4302537.6298116/1‑94 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG > SRR4302537.4440084/1‑94 (MQ=60)
GGTCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGC > SRR4302537.4597352/1‑94 (MQ=60)
TCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG < SRR4302537.4388840/94‑1 (MQ=60)
GCATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG < SRR4302537.5083537/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302537.2477723/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302537.575290/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302537.5718263/94‑1 (MQ=60)
CATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG > SRR4302537.5269922/1‑94 (MQ=60)
CATGTCTCGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302537.2212393/94‑1 (MQ=60)
ATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT > SRR4302537.2080254/1‑94 (MQ=60)
ATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT < SRR4302537.1550577/94‑1 (MQ=60)
ATTTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT > SRR4302537.4884936/1‑94 (MQ=60)
TTCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAT < SRR4302537.1747441/94‑1 (MQ=60)
TCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302537.2570939/94‑1 (MQ=60)
TCACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302537.5837539/94‑1 (MQ=60)
ACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT > SRR4302537.3892524/1‑94 (MQ=60)
ACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT > SRR4302537.5334293/1‑94 (MQ=60)
ACGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTGTTCCAGCATGTATTCT > SRR4302537.5518163/1‑94 (MQ=60)
CGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTG < SRR4302537.3619397/94‑1 (MQ=60)
CGCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTG < SRR4302537.1459039/94‑1 (MQ=60)
GCGCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGC < SRR4302537.3376677/94‑1 (MQ=60)
GCGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCA < SRR4302537.3027207/94‑1 (MQ=60)
CGCGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAG > SRR4302537.890884/1‑94 (MQ=60)
CGACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAATCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA < SRR4302537.5253564/94‑1 (MQ=60)
GACGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAG < SRR4302537.3604891/94‑1 (MQ=60)
CGCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302537.1362/94‑1 (MQ=60)
CGCGC‑‑CGCCTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302537.368255/94‑1 (MQ=60)
GCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC < SRR4302537.4169229/94‑1 (MQ=60)
GCGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC > SRR4302537.2662622/1‑94 (MQ=60)
CGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCGCGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302537.4653657/94‑1 (MQ=60)
CGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302537.2196103/94‑1 (MQ=60)
CGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302537.6494516/94‑1 (MQ=60)
CGC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG > SRR4302537.324190/1‑94 (MQ=60)
GC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGT > SRR4302537.271638/1‑94 (MQ=60)
GC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGT < SRR4302537.5833744/94‑1 (MQ=60)
GC‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGT < SRR4302537.2069482/94‑1 (MQ=60)
C‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT < SRR4302537.4440151/94‑1 (MQ=60)
C‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT < SRR4302537.3077499/94‑1 (MQ=60)
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CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGG‑‑CGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876503‑3876688
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
