Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,242,993	A→G	T84A (ACC→GCC)	exuT →	ExuT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,242,993	0	A	G	99.7%	1178.3 / NA	340	T84A (ACC→GCC)	exuT	ExuT
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (154/185); minor base T (0/1); total (154/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 356 total aligned reads displayed.

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         <  1:6934550/93‑1 (MQ=255)

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         >  2:8157339/1‑93 (MQ=255)

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         >  2:805302/1‑93 (MQ=255)

     gACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACa                                                                                    <  1:500911/93‑1 (MQ=255)

       cGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGt                                                                                  <  2:3681792/93‑1 (MQ=255)

       cGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGt                                                                                  >  2:429086/1‑93 (MQ=255)

        gCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTa                                                                                 <  2:2791534/93‑1 (MQ=255)

         cTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAt                                                                                <  1:7828059/93‑1 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  2:4826063/1‑93 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  1:2530394/1‑93 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               >  2:2884485/1‑93 (MQ=255)

               cccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  2:7656103/92‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          >  1:8412021/1‑93 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  1:6827025/93‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTAAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  2:5306335/93‑1 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         <  2:3453532/93‑1 (MQ=255)

                 cGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTatat                                                                        <  1:8725469/93‑1 (MQ=255)

                  gTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatc                                                                       <  1:2785855/93‑1 (MQ=255)

                    gCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcat                                                                     <  1:6757017/93‑1 (MQ=255)

                     gttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcatc                                                                    <  1:2373788/92‑1 (MQ=255)

                     cTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAGCATCTCCGCCCAACAGTATTCCTATatcatc                                                                    >  1:6389367/1‑93 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:5528947/93‑1 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:5672582/93‑1 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   <  1:2924636/93‑1 (MQ=255)

                       tGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGc                                                                  <  1:7493903/93‑1 (MQ=255)

                        ggTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCa                                                                 >  2:273839/1‑93 (MQ=255)

                        ggTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCa                                                                 >  1:8080617/1‑93 (MQ=255)

                           tACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGcc                                                              <  2:3048418/93‑1 (MQ=255)

                            aCCTGACGCGTAACACTGTGGCGGGAGCTACGCCAACTCTGGTGGAAGAGATAAACATCTCCGCCCAACAGGCTTCCTATATCATCGTAGTCt                                                             >  2:1771248/1‑93 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           <  2:1668536/93‑1 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           <  2:3086956/93‑1 (MQ=255)

                                taCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         <  2:3941713/92‑1 (MQ=255)

                                gACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         >  1:7135243/1‑93 (MQ=255)

                                gACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         >  1:1133555/1‑93 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  2:6252764/93‑1 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  2:8527545/93‑1 (MQ=255)

                                   gcgTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTctgc                                                      <  1:7644807/93‑1 (MQ=255)

                                    cgTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTctgct                                                     <  1:7261865/93‑1 (MQ=255)

                                          acTGTGGCGGCAGCTGCGCCGACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtat                                               >  1:339829/1‑93 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              <  2:5124471/93‑1 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCCGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              <  1:1505106/93‑1 (MQ=255)

                                            tgtgGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAc                                             <  1:8235171/93‑1 (MQ=255)

                                             gtgGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACg                                            >  2:794839/1‑93 (MQ=255)

                                               ggcggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGt                                          <  2:2007098/93‑1 (MQ=255)

                                                 cggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCa                                        >  2:8701082/1‑93 (MQ=255)

                                                  ggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAt                                       <  1:7928309/93‑1 (MQ=255)

                                                  ggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAt                                       <  2:7076717/93‑1 (MQ=255)

                                                   gcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGATGCTTATACGGTCAtt                                      >  2:4096203/1‑92 (MQ=255)

                                                    cAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGc                                     <  2:7272815/93‑1 (MQ=255)

                                                     aGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCa                                    >  2:2828338/1‑93 (MQ=255)

                                                     aGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGGATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCa                                    >  1:592095/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  1:1738508/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  2:6786054/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   <  2:357179/93‑1 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  >  2:2269527/1‑93 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  <  1:4299982/93‑1 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  <  2:1583362/93‑1 (MQ=255)

                                                        tGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAcc                                 <  2:1480856/93‑1 (MQ=255)

                                                        tGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAcc                                 >  1:4768208/1‑93 (MQ=255)

                                                           gcCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGt                              <  1:3202931/93‑1 (MQ=255)

                                                            ccAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTa                             >  2:5851811/1‑93 (MQ=255)

                                                             cAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            <  1:2147110/93‑1 (MQ=255)

                                                             cAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            >  2:1077681/1‑93 (MQ=255)

                                                             cAAATCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAg                            <  1:437329/93‑1 (MQ=255)

                                                              aaCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGc                           <  2:2570591/93‑1 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          <  1:3240123/93‑1 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          >  2:4401870/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         >  1:3665946/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         >  1:3940513/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         <  2:4778431/93‑1 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        <  1:7099159/93‑1 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  2:6875295/1‑93 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  2:1495307/1‑93 (MQ=255)

                                                                   tGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGtt                      <  1:996867/93‑1 (MQ=255)

                                                                    gATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTa                     <  1:4167177/93‑1 (MQ=255)

                                                                      tGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGTAGGTTATg                   <  2:5152368/93‑1 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  >  1:2061322/1‑93 (MQ=255)

                                                                        gAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTa                 >  2:2667749/1‑93 (MQ=255)

                                                                        gAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTa                 >  1:5742980/1‑93 (MQ=255)

                                                                           gagTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTg              >  2:3237375/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            >  2:8196847/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            >  2:7447776/1‑93 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  2:6507250/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  1:5174730/93‑1 (MQ=255)

                                                                              ttAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAt           <  2:750138/93‑1 (MQ=255)

                                                                               tAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtg          <  2:6328603/93‑1 (MQ=255)

                                                                               tAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtg          >  1:5123448/1‑93 (MQ=255)

                                                                                 aaCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCCTGCAACCGGTAGCAGGTTATGTACTGGAtgtg        >  1:3814934/1‑93 (MQ=255)

                                                                                  aCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGc       >  2:6078263/1‑93 (MQ=255)

                                                                                  aCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGc       >  2:1216758/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     >  2:8452180/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     >  1:6333586/1‑93 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     <  1:7366751/93‑1 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    <  2:6684141/93‑1 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    >  1:6238662/1‑93 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    >  1:1858100/1‑93 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    <  1:8647723/93‑1 (MQ=255)

                                                                                      ctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTggg   >  2:3278173/1‑93 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  <  1:3002897/93‑1 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  >  2:5934247/1‑93 (MQ=255)

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGA  >  NC_000913/3242900‑3243086

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCG                                                                                               <  SRR4302541.7569878/94‑1 (MQ=60)

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCG                                                                                               <  SRR4302541.7128725/94‑1 (MQ=60)

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCC                                                                                               >  SRR4302541.6374014/1‑94 (MQ=60)

GCACTGGTGACGCTCGACACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGACAACTCTGATGGAAGAGTTAAACATCTCCG                                                                                               <  SRR4302541.7928808/94‑1 (MQ=60)

 CACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGC                                                                                              <  SRR4302541.7819677/94‑1 (MQ=60)

 CACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCCGATGGAAGAGTTAAACATCTCCGC                                                                                              >  SRR4302541.3461433/1‑94 (MQ=60)

 CACTGGTGACGCTCGGCACAGCGCTCGGTTACCTGCCGCGTAACACTGTGGCGGCAGATGTGCGTACTCCGATGGAAGACATAAACATCTCTAC                                                                                              >  SRR4302541.1360896/1‑94 (MQ=28)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCC                                                                                            >  SRR4302541.5700759/1‑94 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCC                                                                                            <  SRR4302541.7008537/94‑1 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATAGAAGAGGTAAACATCTACGCCC                                                                                            >  SRR4302541.7311862/1‑94 (MQ=60)

     GGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAA                                                                                          >  SRR4302541.6998935/1‑94 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                         >  SRR4302541.7977631/1‑94 (MQ=60)

        GACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAG                                                                                       <  SRR4302541.505623/94‑1 (MQ=60)

        GACGCTCGGCACCGTGCTTAGTTACCTGACGCGTAACACTGAGGCGGCAGCTGCGCCAACACTGATGGAAGAGTTAAACATCACCGCCCAACAG                                                                                       <  SRR4302541.7914823/94‑1 (MQ=60)

         ACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGNTAAACATCTCCGNCNANCNGT                                                                                      >  SRR4302541.449045/1‑94 (MQ=60)

          CGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTA                                                                                     >  SRR4302541.5776399/1‑94 (MQ=60)

           GCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAT                                                                                    <  SRR4302541.8312740/94‑1 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                   >  SRR4302541.2555822/1‑94 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                   <  SRR4302541.7913174/94‑1 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                   >  SRR4302541.5007179/1‑94 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                   >  SRR4302541.4034332/1‑94 (MQ=60)

             TCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTC                                                                                  >  SRR4302541.7790953/1‑94 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                 <  SRR4302541.5398287/94‑1 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                 <  SRR4302541.6393276/94‑1 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                 <  SRR4302541.281715/94‑1 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                 >  SRR4302541.6897164/1‑94 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                 <  SRR4302541.7155167/94‑1 (MQ=60)

               GGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCT                                                                                <  SRR4302541.6415373/94‑1 (MQ=60)

               GGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCT                                                                                <  SRR4302541.3213633/94‑1 (MQ=60)

                GCACCGTGCTTGGTTACCTGACGCGTAGCACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTA                                                                               <  SRR4302541.5454274/94‑1 (MQ=60)

                GCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTA                                                                               >  SRR4302541.836248/1‑94 (MQ=60)

                GCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTA                                                                               <  SRR4302541.8741317/94‑1 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTAT                                                                              >  SRR4302541.4697947/1‑94 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTAT                                                                              >  SRR4302541.8502988/1‑94 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTAT                                                                              <  SRR4302541.4372789/94‑1 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGGAACACTGTGGCGGCAGCTGCGCGAAAGCTTAGTGAAGAGTTATACATCTCCGCCCAACAGTATTattat                                                                              >  SRR4302541.308265/1‑89 (MQ=44)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                             <  SRR4302541.6900079/94‑1 (MQ=60)

                    CGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATC                                                                           <  SRR4302541.8818761/94‑1 (MQ=60)

                     GTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCA                                                                          <  SRR4302541.2813955/94‑1 (MQ=60)

                       GCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAGCATCTCCGCCCAACAGTATTCCTATATCATC                                                                        >  SRR4302541.3985554/1‑94 (MQ=60)

                       GCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAGCATCTCCGCCCAACAGTATTCCTATATCATC                                                                        >  SRR4302541.6454604/1‑94 (MQ=60)

                       GCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATC                                                                        <  SRR4302541.6829278/94‑1 (MQ=60)

                       GCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATC                                                                        >  SRR4302541.3818741/1‑94 (MQ=60)

                        GTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                       <  SRR4302541.2396966/94‑1 (MQ=60)

                        CTTGGTTACCTGCCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                       <  SRR4302541.6812344/94‑1 (MQ=60)

                        CTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                       <  SRR4302541.196176/94‑1 (MQ=60)

                        CTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                       <  SRR4302541.5751995/94‑1 (MQ=60)

                         TTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGC                                                                      <  SRR4302541.2954043/94‑1 (MQ=60)

                         TTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGC                                                                      <  SRR4302541.5730478/94‑1 (MQ=60)

                         TTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGC                                                                      <  SRR4302541.5585548/94‑1 (MQ=60)

                          TGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCA                                                                     >  SRR4302541.8169252/1‑94 (MQ=60)

                          TGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCA                                                                     <  SRR4302541.7574032/94‑1 (MQ=60)

                          TGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCA                                                                     <  SRR4302541.7474240/94‑1 (MQ=60)

                           TGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAG                                                                    <  SRR4302541.7245109/94‑1 (MQ=60)

                           GGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAG                                                                    <  SRR4302541.6921184/94‑1 (MQ=60)

                            GTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGC                                                                   <  SRR4302541.3006080/94‑1 (MQ=60)

                             TTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCACCC                                                                  >  SRR4302541.3259590/1‑94 (MQ=60)

                              TACCTGACGCGTAACACTGTGGCGGCAGCGGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCT                                                                 <  SRR4302541.8667398/94‑1 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                               <  SRR4302541.8740977/94‑1 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                               >  SRR4302541.503233/1‑94 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                               <  SRR4302541.2426280/94‑1 (MQ=60)

                                 CTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATT                                                              <  SRR4302541.5675037/94‑1 (MQ=60)

                                 CTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATT                                                              >  SRR4302541.5902361/1‑94 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                             >  SRR4302541.962170/1‑94 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                             <  SRR4302541.561233/94‑1 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                             >  SRR4302541.7211280/1‑94 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                             >  SRR4302541.7211279/1‑94 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                             >  SRR4302541.1144280/1‑94 (MQ=60)

                                   GACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCT                                                            <  SRR4302541.3128914/94‑1 (MQ=60)

                                   GACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCT                                                            >  SRR4302541.3316622/1‑94 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                           <  SRR4302541.897259/94‑1 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                           <  SRR4302541.7771245/94‑1 (MQ=60)

                                     CGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGC                                                          >  SRR4302541.7404216/1‑94 (MQ=60)

                                     CGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGC                                                          >  SRR4302541.3928440/1‑94 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                         <  SRR4302541.7559307/94‑1 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                         <  SRR4302541.7726295/94‑1 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                         <  SRR4302541.2159924/94‑1 (MQ=60)

                                       CGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTG                                                        <  SRR4302541.7339334/94‑1 (MQ=60)

                                       CGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTG                                                        <  SRR4302541.7339335/94‑1 (MQ=60)

                                       CGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTG                                                        >  SRR4302541.7679523/1‑94 (MQ=60)

                                        GTTACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGC                                                       <  SRR4302541.2717106/94‑1 (MQ=60)

                                         TAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCT                                                      <  SRR4302541.3968272/94‑1 (MQ=60)

                                         TAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCT                                                      <  SRR4302541.8116427/94‑1 (MQ=60)

                                         TAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATAGCAGCCTATTCTGCTGCT                                                      >  SRR4302541.2167097/1‑94 (MQ=60)

                                            CACTGTGGCGGCAGCTGCGCCGACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTAT                                                   >  SRR4302541.342880/1‑94 (MQ=60)

                                             ACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATA                                                  <  SRR4302541.7541827/94‑1 (MQ=60)

                                             ACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATA                                                  >  SRR4302541.3317987/1‑94 (MQ=60)

                                             ACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATA                                                  <  SRR4302541.7838677/94‑1 (MQ=60)

                                              CTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAC                                                 <  SRR4302541.5838167/94‑1 (MQ=60)

                                              CTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAC                                                 >  SRR4302541.3569474/1‑94 (MQ=60)

                                              CTGTGGCGGCAGCTGCGCCAACTCCGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAC                                                 <  SRR4302541.1520030/94‑1 (MQ=60)

                                               TGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACG                                                <  SRR4302541.8324937/94‑1 (MQ=60)

                                                TTGGCGGCAGCCGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGG                                               <  SRR4302541.6659836/94‑1 (MQ=60)

                                                 TGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGT                                              <  SRR4302541.2753046/94‑1 (MQ=60)

                                                 TGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGT                                              >  SRR4302541.7015618/1‑94 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                             >  SRR4302541.2930268/1‑94 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                             >  SRR4302541.1948667/1‑94 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                             >  SRR4302541.1843200/1‑94 (MQ=60)

                                                   GCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCA                                            <  SRR4302541.4317603/94‑1 (MQ=60)

                                                   GCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCA                                            <  SRR4302541.4376061/94‑1 (MQ=60)

                                                    CGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAT                                           >  SRR4302541.1248332/1‑94 (MQ=60)

                                                    CGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAT                                           >  SRR4302541.2793596/1‑94 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATG                                          <  SRR4302541.6131987/94‑1 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATG                                          <  SRR4302541.8015607/94‑1 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATG                                          <  SRR4302541.5132418/94‑1 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGACGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCCTG                                          >  SRR4302541.1697694/1‑94 (MQ=60)

                                                      GCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGC                                         <  SRR4302541.8131065/94‑1 (MQ=60)

                                                       CAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGGATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCA                                        >  SRR4302541.597671/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCTCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                       <  SRR4302541.2168191/94‑1 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                       >  SRR4302541.7597089/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                       >  SRR4302541.380065/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                       >  SRR4302541.1755483/1‑94 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     <  SRR4302541.1618507/94‑1 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     >  SRR4302541.519369/1‑94 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     <  SRR4302541.4342924/94‑1 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     <  SRR4302541.6777674/94‑1 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     >  SRR4302541.4816900/1‑94 (MQ=60)

                                                          CTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACC                                     >  SRR4302541.4698985/1‑94 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                  >  SRR4302541.8455551/1‑94 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                  >  SRR4302541.5219270/1‑94 (MQ=60)

                                                              GCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACTGTCATGCAACCGGTA                                 >  SRR4302541.7181787/1‑94 (MQ=60)

                                                              GCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTA                                 <  SRR4302541.3235285/94‑1 (MQ=60)

                                                               CCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAG                                >  SRR4302541.3768745/1‑94 (MQ=60)

                                                               CCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAG                                >  SRR4302541.1557095/1‑94 (MQ=60)

                                                               CCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAG                                <  SRR4302541.5871739/94‑1 (MQ=60)

                                                                CAACTCTGATGGAAGAGTTAAACATCTGCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGC                               >  SRR4302541.6906410/1‑94 (MQ=60)

                                                                CAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGA                               <  SRR4302541.2167882/94‑1 (MQ=60)

                                                                CAAATCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGC                               <  SRR4302541.441448/94‑1 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             <  SRR4302541.322373/94‑1 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             >  SRR4302541.3979723/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             <  SRR4302541.7418976/94‑1 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             >  SRR4302541.8086004/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             <  SRR4302541.3272835/94‑1 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                             >  SRR4302541.3703139/1‑94 (MQ=60)

                                                                   CTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGG                            <  SRR4302541.186447/94‑1 (MQ=60)

                                                                   CTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGG                            >  SRR4302541.2213393/1‑94 (MQ=60)

                                                                   CTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGG                            >  SRR4302541.890821/1‑94 (MQ=60)

                                                                    TCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGT                           <  SRR4302541.7174702/94‑1 (MQ=60)

                                                                      TGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTA                         <  SRR4302541.1006147/94‑1 (MQ=60)

                                                                      TGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTA                         >  SRR4302541.4154518/1‑94 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                        <  SRR4302541.4208455/94‑1 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                        <  SRR4302541.6243901/94‑1 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                        <  SRR4302541.4208454/94‑1 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATT                       >  SRR4302541.3255482/1‑94 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATG                       >  SRR4302541.5417616/1‑94 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCACGCAACCGGTAGCAGGTTATG                       <  SRR4302541.8627438/94‑1 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCACGCAACCGGTAGCAGGTTATG                       <  SRR4302541.8627437/94‑1 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                      >  SRR4302541.8298815/1‑94 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                      >  SRR4302541.2081230/1‑94 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                      <  SRR4302541.4729870/94‑1 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                     >  SRR4302541.5801486/1‑94 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                     >  SRR4302541.1234655/1‑94 (MQ=60)

                                                                             AGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTG                  <  SRR4302541.4285774/94‑1 (MQ=60)

                                                                             AGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTG                  <  SRR4302541.6310132/94‑1 (MQ=60)

                                                                                GTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT               <  SRR4302541.2258399/94‑1 (MQ=60)

                                                                                GTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT               <  SRR4302541.5227984/94‑1 (MQ=60)

                                                                                 TTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATG              >  SRR4302541.5176105/1‑94 (MQ=60)

                                                                                 TTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATG              >  SRR4302541.5176106/1‑94 (MQ=60)

                                                                                  TAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGT             >  SRR4302541.2495133/1‑94 (MQ=60)

                                                                                   AAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCCTGCAACCGGTAGCAGGTTATGTACTGGATGTG            >  SRR4302541.3853364/1‑94 (MQ=60)

                                                                                   AAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTG            <  SRR4302541.8281805/94‑1 (MQ=60)

                                                                                    AACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGC           >  SRR4302541.714021/1‑94 (MQ=60)

                                                                                      CATCTCCTCCAAACAGTATTCCTATATCATCACAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG         <  SRR4302541.3543246/94‑1 (MQ=60)

                                                                                      CATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG         >  SRR4302541.6398335/1‑94 (MQ=60)

                                                                                      CATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG         >  SRR4302541.6898050/1‑94 (MQ=60)

                                                                                      CATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG         >  SRR4302541.2858113/1‑94 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG        <  SRR4302541.7445489/94‑1 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG        >  SRR4302541.6302409/1‑94 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG        >  SRR4302541.1876028/1‑94 (MQ=60)

                                                                                        TCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGG       <  SRR4302541.5146237/94‑1 (MQ=60)

                                                                                        TCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGG       <  SRR4302541.8740329/94‑1 (MQ=60)

                                                                                         CTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT      >  SRR4302541.3330378/1‑94 (MQ=60)

                                                                                          TCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTA     <  SRR4302541.194766/94‑1 (MQ=60)

                                                                                          TCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTA     <  SRR4302541.6413041/94‑1 (MQ=60)

                                                                                          TCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTA     <  SRR4302541.3033214/94‑1 (MQ=60)

                                                                                          TCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTA     <  SRR4302541.3033213/94‑1 (MQ=60)

                                                                                          TCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTA     >  SRR4302541.7540763/1‑94 (MQ=60)

                                                                                           CCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTAC    <  SRR4302541.3452188/94‑1 (MQ=60)

                                                                                             GCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGA  >  SRR4302541.8350341/1‑94 (MQ=60)

                                                                                             GCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGA  >  SRR4302541.1979228/1‑94 (MQ=60)

                                                                                             CCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGA  <  SRR4302541.4639174/94‑1 (MQ=60)

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGA  >  NC_000913/3242900‑3243086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`