Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,471,916 C→T G92S (GGT→AGT)  rpsL ← 30S ribosomal subunit protein S12

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,471,9160CT99.7% 1204.8 / ‑5.7 342G92S (GGT→AGT) rpsL30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (185/156);  total (185/157)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01

Only 100 of 360 total aligned reads displayed.

GACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGA  >  NC_000913/3471826‑3472008
                                                                                          |                                                                                            
gACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCg                                                                                            >  2:5421720/1‑93 (MQ=255)
 aCGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCgg                                                                                           <  2:1272474/93‑1 (MQ=255)
  cGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCggg                                                                                          <  2:1549754/93‑1 (MQ=255)
   gCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGa                                                                                         >  1:8139157/1‑93 (MQ=255)
     ttCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAgg                                                                                       >  2:5171528/1‑93 (MQ=255)
      tCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAggc                                                                                      >  1:7711810/1‑92 (MQ=255)
       cACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTc                                                                                     <  1:5211826/93‑1 (MQ=255)
           ccATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTa                                                                                 >  1:157053/1‑93 (MQ=255)
             aTACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAac                                                                               >  2:2024122/1‑93 (MQ=255)
             aTACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAac                                                                               >  2:747527/1‑93 (MQ=255)
             aTACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAac                                                                               >  2:1817774/1‑93 (MQ=255)
             aTACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAac                                                                               >  2:495308/1‑93 (MQ=255)
              tACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAATCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGCTTTAaca                                                                              >  2:6017376/1‑93 (MQ=255)
              tACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAaca                                                                              >  1:6510531/1‑93 (MQ=255)
              tACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAaca                                                                              <  2:3769639/93‑1 (MQ=255)
              tACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAaca                                                                              <  1:95637/93‑1 (MQ=255)
              tACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAaca                                                                              >  1:2150215/1‑93 (MQ=255)
               aCTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAacac                                                                             <  2:6442518/93‑1 (MQ=255)
               aCTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAacac                                                                             >  1:5925606/1‑93 (MQ=255)
                cTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACg                                                                            >  2:3247116/1‑93 (MQ=255)
                 ttGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGa                                                                           >  2:4571239/1‑93 (MQ=255)
                 ttGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGa                                                                           <  2:3140265/93‑1 (MQ=255)
                 ttGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGACTTTAACACgc                                                                           >  1:1281999/1‑92 (MQ=255)
                  tGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGAc                                                                          <  1:3855374/93‑1 (MQ=255)
                  tGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGAc                                                                          <  1:7339210/93‑1 (MQ=255)
                   ggAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTTACACGAcc                                                                         >  2:359078/1‑93 (MQ=255)
                   ggAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGAcc                                                                         >  1:8462796/1‑93 (MQ=255)
                   ggAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAAGAcc                                                                         >  1:3555468/1‑93 (MQ=255)
                      aCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGcc                                                                      >  1:5094675/1‑93 (MQ=255)
                      aCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGcc                                                                      <  1:2179126/93‑1 (MQ=255)
                      aCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGcc                                                                      >  1:1460692/1‑93 (MQ=255)
                      aCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAACAcgcccgcc                                                                      >  1:1981618/1‑93 (MQ=255)
                      aCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTAGGGAGGTCTTTAACACGACCGcc                                                                      >  2:4736635/1‑93 (MQ=255)
                       cGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCa                                                                     <  1:691058/93‑1 (MQ=255)
                        gAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCAc                                                                    <  1:3232558/93‑1 (MQ=255)
                        gAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCAc                                                                    >  2:6107377/1‑93 (MQ=255)
                          gCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACgg                                                                  >  1:833312/1‑93 (MQ=255)
                           ccTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACgga                                                                 <  2:6896139/93‑1 (MQ=255)
                            cTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggat                                                                >  1:2965268/1‑93 (MQ=255)
                            cTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggac                                                                >  1:1835481/1‑92 (MQ=255)
                             tGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatc                                                               <  2:7594958/93‑1 (MQ=255)
                             tGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatc                                                               >  1:7093883/1‑93 (MQ=255)
                              gCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatca                                                              >  1:2891029/1‑93 (MQ=255)
                                ttACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatcagg                                                            <  1:8202192/93‑1 (MQ=255)
                                 tACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatcagga                                                           >  1:7855222/1‑93 (MQ=255)
                                   cGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatcaggatc                                                         <  1:6399863/93‑1 (MQ=255)
                                    ggTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatcaggatca                                                        >  2:2868131/1‑93 (MQ=255)
                                    ggTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACggatcaggatca                                                        >  1:108377/1‑93 (MQ=255)
                                       cTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACgg                                                     <  2:6959434/93‑1 (MQ=255)
                                        tttAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGa                                                    <  2:5529917/93‑1 (MQ=255)
                                         ttAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAg                                                   >  1:889308/1‑93 (MQ=255)
                                          tAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGt                                                  <  2:2575748/93‑1 (MQ=255)
                                          tAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGt                                                  <  2:4460324/93‑1 (MQ=255)
                                             agCCGGCGCAGCCAAGCGCACCACGTACGGTGTGGTAACGACCACTCGGGAGGTCTTTAACACGCCCGCCACGGATCAGGATCACGGAGTGCt                                               <  1:2449353/92‑1 (MQ=255)
                                              gCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGGGCGCTc                                              >  1:5792142/1‑93 (MQ=255)
                                                cGGAGCAGTCAAGCGCACCACGTACGGTTTGGTAACTAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCt                                            <  1:2237604/93‑1 (MQ=255)
                                                cGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCt                                            >  2:7717939/1‑93 (MQ=255)
                                                 ggAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTg                                           <  2:536244/93‑1 (MQ=255)
                                                 ggAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTg                                           <  1:6787482/93‑1 (MQ=255)
                                                  gAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGc                                          >  2:6310536/1‑93 (MQ=255)
                                                  gAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGc                                          <  2:5613562/93‑1 (MQ=255)
                                                   aGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACTACCGCCACGTATCCGGATCACGGAGCGCTCCTGCa                                         >  1:6699822/1‑93 (MQ=255)
                                                   aGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCa                                         <  1:5966672/93‑1 (MQ=255)
                                                   aGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCa                                         <  2:4238346/93‑1 (MQ=255)
                                                    gCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAg                                        >  1:5487004/1‑93 (MQ=255)
                                                      aGTCAAGCGCACCACGTACGGTGTGGTAACGAGCACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGt                                      <  1:5578908/93‑1 (MQ=255)
                                                      aGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGt                                      >  1:4499465/1‑93 (MQ=255)
                                                       gTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATAAGGATCACGGAGCGCTCCTGCAGGtt                                     >  1:4820047/1‑93 (MQ=255)
                                                         cAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTtgg                                   >  2:6705647/1‑92 (MQ=255)
                                                          aaGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTtgtg                                  >  1:7772304/1‑93 (MQ=255)
                                                           aGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGa                                 >  1:4097564/1‑93 (MQ=255)
                                                            gcgcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGAc                                <  1:7211438/93‑1 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              <  1:4990106/93‑1 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              <  1:7494130/93‑1 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              <  2:3922055/93‑1 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              <  1:2047153/93‑1 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              >  1:8002478/1‑93 (MQ=255)
                                                              gcACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              <  1:5701445/93‑1 (MQ=255)
                                                              gcACCAAGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCt                              >  2:3492205/1‑93 (MQ=255)
                                                                 ccacGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTca                           >  2:1084807/1‑93 (MQ=255)
                                                                  cacGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTcac                          <  2:2478313/93‑1 (MQ=255)
                                                                      gaCGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCaccacc                      <  2:3001598/92‑1 (MQ=255)
                                                                        cGGTGTCGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGa                    <  2:157251/93‑1 (MQ=255)
                                                                          gtgtGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATg                  >  2:6825295/1‑93 (MQ=255)
                                                                            gtgGTAACGAACACTCGGGAGGCCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGtc                >  2:4127197/1‑92 (MQ=255)
                                                                              ggTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAgg              <  1:4800617/93‑1 (MQ=255)
                                                                               gTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa             <  2:5836410/93‑1 (MQ=255)
                                                                                tAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGag            >  1:4338642/1‑92 (MQ=255)
                                                                                tAAAGAACACTCGGGAGGTCTNTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGaa            <  1:2673072/93‑1 (MQ=255)
                                                                                 aaCGACAACTCGGGCGGTCTTTAACACTACCGCCTCAGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAg           <  1:5622650/93‑1 (MQ=255)
                                                                                  aCGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAgc          >  2:8270750/1‑92 (MQ=255)
                                                                                   cGAACACTCGGGATGGCTTTAAGACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCAATGTAGGAAGTc         <  2:2803936/93‑1 (MQ=255)
                                                                                   cGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAggc         <  1:4186351/93‑3 (MQ=255)
                                                                                   cGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTc         <  2:1298220/93‑1 (MQ=255)
                                                                                   cGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTc         <  1:2549460/93‑1 (MQ=255)
                                                                                       cacTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt     >  2:8620107/1‑93 (MQ=255)
                                                                                       cacTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt     >  2:7303747/1‑93 (MQ=255)
                                                                                       cacTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt     >  2:6195440/1‑93 (MQ=255)
                                                                                       cacTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt     <  2:2316521/93‑1 (MQ=255)
                                                                                       cacTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt     >  1:6802792/1‑93 (MQ=255)
                                                                                          |                                                                                            
GACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGA  >  NC_000913/3471826‑3472008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.
TAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAA  >  NC_000913/3471823‑3472009
                                                                                             |                                                                                             
TAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACT                                                                                               <  SRR4302541.2647539/94‑1 (MQ=60)
TAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACT                                                                                               <  SRR4302541.1349441/94‑1 (MQ=60)
TAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACT                                                                                               >  SRR4302541.5794065/1‑94 (MQ=60)
 AGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTC                                                                                              >  SRR4302541.7301125/1‑94 (MQ=60)
 AGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTC                                                                                              <  SRR4302541.3455037/94‑1 (MQ=60)
 AGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTC                                                                                              >  SRR4302541.1427973/1‑94 (MQ=60)
 AGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTC                                                                                              <  SRR4302541.3783889/94‑1 (MQ=60)
  GGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCG                                                                                             <  SRR4302541.326225/94‑1 (MQ=60)
  GGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCG                                                                                             <  SRR4302541.3224622/94‑1 (MQ=60)
   GACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGG                                                                                            <  SRR4302541.5703712/94‑1 (MQ=60)
    ACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGG                                                                                           >  SRR4302541.2528094/1‑94 (MQ=60)
     CGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGA                                                                                          >  SRR4302541.6355114/1‑94 (MQ=60)
     CGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGA                                                                                          >  SRR4302541.8228215/1‑94 (MQ=60)
      GCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGTGAG                                                                                         >  SRR4302541.1844545/1‑94 (MQ=60)
      GCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAG                                                                                         >  SRR4302541.92163/1‑94 (MQ=60)
      GCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAG                                                                                         >  SRR4302541.2279522/1‑94 (MQ=60)
       CTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGG                                                                                        >  SRR4302541.5436609/1‑94 (MQ=60)
       CTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGG                                                                                        >  SRR4302541.5103340/1‑94 (MQ=60)
        TTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGC                                                                                       >  SRR4302541.7793835/1‑94 (MQ=60)
        TTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGC                                                                                       >  SRR4302541.7793834/1‑94 (MQ=60)
         TCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTC                                                                                      <  SRR4302541.3250081/94‑1 (MQ=60)
         TCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTC                                                                                      <  SRR4302541.3136135/94‑1 (MQ=60)
         TCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGC                                                                                      >  SRR4302541.1907721/1‑94 (MQ=60)
          CACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCT                                                                                     <  SRR4302541.5265522/94‑1 (MQ=60)
          CACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCT                                                                                     <  SRR4302541.5265523/94‑1 (MQ=60)
          CACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCT                                                                                     >  SRR4302541.8013698/1‑94 (MQ=60)
           ACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTT                                                                                    <  SRR4302541.4403667/94‑1 (MQ=60)
           ACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTT                                                                                    <  SRR4302541.1183256/94‑1 (MQ=60)
            CGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTT                                                                                   >  SRR4302541.8345877/1‑94 (MQ=60)
            CGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTT                                                                                   >  SRR4302541.1442563/1‑94 (MQ=60)
             GCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTA                                                                                  >  SRR4302541.816575/1‑94 (MQ=60)
             GCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTA                                                                                  >  SRR4302541.158229/1‑94 (MQ=60)
              CCATACTGGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAA                                                                                 <  SRR4302541.7411550/94‑1 (MQ=60)
               CATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAAC                                                                                >  SRR4302541.2835374/1‑94 (MQ=60)
               CATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAAC                                                                                >  SRR4302541.7974249/1‑94 (MQ=60)
                ATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACA                                                                               >  SRR4302541.6576952/1‑94 (MQ=60)
                ATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACA                                                                               >  SRR4302541.2171008/1‑94 (MQ=60)
                ATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACA                                                                               >  SRR4302541.5433570/1‑94 (MQ=60)
                ATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACA                                                                               <  SRR4302541.7840959/94‑1 (MQ=60)
                ATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACA                                                                               >  SRR4302541.8916680/1‑94 (MQ=60)
                 TACTTGGAACGTGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAC                                                                              <  SRR4302541.7512910/94‑1 (MQ=60)
                 TACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAC                                                                              >  SRR4302541.7183878/1‑94 (MQ=60)
                 TACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAC                                                                              >  SRR4302541.3896516/1‑94 (MQ=60)
                 TACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAC                                                                              <  SRR4302541.96463/94‑1 (MQ=60)
                 TACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAACAC                                                                              >  SRR4302541.5985953/1‑94 (MQ=60)
                  ACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACG                                                                             <  SRR4302541.7724517/94‑1 (MQ=60)
                   CTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGA                                                                            <  SRR4302541.4282008/94‑1 (MQ=60)
                   CTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGA                                                                            >  SRR4302541.5676546/1‑94 (MQ=60)
                   CTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGACTTTAACACGC                                                                            >  SRR4302541.1294714/1‑94 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACC                                                                          <  SRR4302541.3894166/94‑1 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACC                                                                          >  SRR4302541.113855/1‑94 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACC                                                                          <  SRR4302541.7417586/94‑1 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACC                                                                          >  SRR4302541.8554084/1‑94 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACC                                                                          <  SRR4302541.2182764/94‑1 (MQ=60)
                     TGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACAAGACC                                                                          >  SRR4302541.3591437/1‑94 (MQ=60)
                      GGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCG                                                                         <  SRR4302541.8731528/94‑1 (MQ=60)
                      GGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCG                                                                         >  SRR4302541.7177165/1‑94 (MQ=60)
                      GGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCG                                                                         <  SRR4302541.5965460/94‑1 (MQ=60)
                        AACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCC                                                                       >  SRR4302541.2990442/1‑94 (MQ=60)
                        AACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCC                                                                       >  SRR4302541.1474974/1‑94 (MQ=60)
                        AACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCC                                                                       >  SRR4302541.5146993/1‑94 (MQ=60)
                        AACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAACACGCCCGCC                                                                       >  SRR4302541.2000772/1‑94 (MQ=60)
                         ACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCA                                                                      <  SRR4302541.2200181/94‑1 (MQ=60)
                          CGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCAC                                                                     <  SRR4302541.8265511/94‑1 (MQ=60)
                          CGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCAC                                                                     <  SRR4302541.697566/94‑1 (MQ=60)
                          AGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCAC                                                                     <  SRR4302541.6712567/94‑1 (MQ=60)
                           GAGCCTGCTTACGGTCTTTAACGTCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACG                                                                    >  SRR4302541.4175891/1‑94 (MQ=60)
                           GAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACG                                                                    <  SRR4302541.3265198/94‑1 (MQ=60)
                           GAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACG                                                                    >  SRR4302541.3810875/1‑94 (MQ=60)
                           GAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACG                                                                    <  SRR4302541.6799394/94‑1 (MQ=60)
                            AGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGG                                                                   <  SRR4302541.6778219/94‑1 (MQ=60)
                            AGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGG                                                                   >  SRR4302541.840875/1‑94 (MQ=60)
                            AGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGCTTTAACACGACCGCCACGG                                                                   >  SRR4302541.2071135/1‑94 (MQ=60)
                             GCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGA                                                                  >  SRR4302541.2239017/1‑94 (MQ=60)
                              CCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGAT                                                                 >  SRR4302541.2995125/1‑94 (MQ=60)
                              CCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGAC                                                                 >  SRR4302541.1853275/1‑94 (MQ=60)
                              CCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGGAACGAACACTCGGGAGGGCTTTAACACGACCGCCACGGAC                                                                 >  SRR4302541.3985153/1‑94 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATC                                                                <  SRR4302541.2327769/94‑1 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATC                                                                >  SRR4302541.7169365/1‑94 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATC                                                                >  SRR4302541.4968174/1‑94 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATC                                                                >  SRR4302541.7386500/1‑94 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTCAACACGACCGCCACGGATC                                                                >  SRR4302541.4399683/1‑94 (MQ=60)
                               CTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAACCCGACCGCCACGGATG                                                                >  SRR4302541.6893606/1‑94 (MQ=60)
                                TGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGACTTTAACACGACCGCCACGGATCA                                                               >  SRR4302541.7129203/1‑94 (MQ=60)
                                  CTTACGGTCTTTAACGCTGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGG                                                             >  SRR4302541.2659371/1‑94 (MQ=60)
                                  CTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGG                                                             <  SRR4302541.3455765/94‑1 (MQ=60)
                                   TTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGA                                                            <  SRR4302541.8291698/94‑1 (MQ=60)
                                   TTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGA                                                            >  SRR4302541.7941462/1‑94 (MQ=60)
                                     ACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATC                                                          <  SRR4302541.1491440/94‑1 (MQ=60)
                                     ACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATC                                                          >  SRR4302541.5026707/1‑94 (MQ=60)
                                     ACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATC                                                          <  SRR4302541.8083086/94‑1 (MQ=60)
                                      CGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCA                                                         >  SRR4302541.109269/1‑94 (MQ=60)
                                      CGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCA                                                         >  SRR4302541.5062311/1‑94 (MQ=60)
                                      CGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCA                                                         >  SRR4302541.7901239/1‑94 (MQ=60)
                                      CGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCA                                                         <  SRR4302541.6465176/94‑1 (MQ=60)
                                      CGGTCTTTAACGCCGGAACCGTCCCGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCA                                                         <  SRR4302541.7925172/94‑1 (MQ=60)
                                       GGTCTTTAACGCCGGATCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCAC                                                        <  SRR4302541.6672672/94‑1 (MQ=60)
                                       GGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACGCTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCAC                                                        <  SRR4302541.4926915/94‑1 (MQ=60)
                                        GTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACG                                                       <  SRR4302541.3203658/94‑1 (MQ=60)
                                        GTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACG                                                       >  SRR4302541.6256434/1‑94 (MQ=60)
                                        GTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACG                                                       >  SRR4302541.8288475/1‑94 (MQ=60)
                                         TCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGG                                                      >  SRR4302541.3843428/1‑94 (MQ=60)
                                          CTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGG                                                     >  SRR4302541.5675028/1‑94 (MQ=60)
                                           TTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAG                                                    >  SRR4302541.897468/1‑94 (MQ=60)
                                           TTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGCATCAGGATCACGGAG                                                    >  SRR4302541.8792272/1‑94 (MQ=60)
                                           TTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGCGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAG                                                    <  SRR4302541.3316014/94‑1 (MQ=60)
                                             TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTG                                                  >  SRR4302541.748767/1‑94 (MQ=60)
                                             TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTG                                                  >  SRR4302541.2598411/1‑94 (MQ=60)
                                             TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGCAGTG                                                  >  SRR4302541.218540/1‑94 (MQ=60)
                                              AACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGC                                                 <  SRR4302541.2039580/94‑1 (MQ=60)
                                               ACGCCGGAGCAGTCAAGCGCCCCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCT                                                <  SRR4302541.2084810/94‑1 (MQ=60)
                                               ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCT                                                <  SRR4302541.5300472/94‑1 (MQ=60)
                                               ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCT                                                <  SRR4302541.2511126/94‑1 (MQ=60)
                                                CGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGGGCGCTC                                               >  SRR4302541.5850997/1‑94 (MQ=60)
                                                AGCCGGCGCAGCCAAGCGCACCACGTACGGTGTGGTAACGACCACTCGGGAGGTCTTTAACACGCCCGCCACGGATCAGGATCACGGAGTGCTC                                               <  SRR4302541.2473693/94‑1 (MQ=60)
                                                 GCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCC                                              <  SRR4302541.194929/94‑1 (MQ=60)
                                                  CCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCT                                             >  SRR4302541.6487208/1‑94 (MQ=60)
                                                  CCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCT                                             <  SRR4302541.6965318/94‑1 (MQ=60)
                                                   CGGAGCAGTCAAGCGCACCACGTACGGTTTGGTAACTAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTG                                            <  SRR4302541.2259275/94‑1 (MQ=60)
                                                   CGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTG                                            >  SRR4302541.144036/1‑94 (MQ=60)
                                                   CGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTG                                            >  SRR4302541.6538821/1‑94 (MQ=60)
                                                    GGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGC                                           >  SRR4302541.710139/1‑94 (MQ=60)
                                                    GGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGC                                           <  SRR4302541.6860065/94‑1 (MQ=60)
                                                     GAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACTACCGCCACGTATCCGGATCACGGAGCGCTCCTGCA                                          >  SRR4302541.6769938/1‑94 (MQ=60)
                                                     GAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCA                                          >  SRR4302541.1439281/1‑94 (MQ=60)
                                                      AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAG                                         <  SRR4302541.6027500/94‑1 (MQ=60)
                                                      AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAG                                         >  SRR4302541.5543244/1‑94 (MQ=60)
                                                      AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAG                                         >  SRR4302541.4228734/1‑94 (MQ=60)
                                                      AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAG                                         >  SRR4302541.5543243/1‑94 (MQ=60)
                                                       GCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGG                                        <  SRR4302541.5897457/94‑1 (MQ=60)
                                                       GCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGG                                        >  SRR4302541.2084121/1‑94 (MQ=60)
                                                       GCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGG                                        <  SRR4302541.7387635/94‑1 (MQ=60)
                                                        CAGTCAAGCGCACCACGTACGGTGTGGTAACGTACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGT                                       <  SRR4302541.1487506/94‑1 (MQ=60)
                                                        CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGT                                       <  SRR4302541.2402749/94‑1 (MQ=60)
                                                        CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGT                                       >  SRR4302541.4544848/1‑94 (MQ=60)
                                                        CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGT                                       >  SRR4302541.8532350/1‑94 (MQ=60)
                                                        CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGT                                       <  SRR4302541.2709177/94‑1 (MQ=60)
                                                         AGTCAAGCGCACCACGTACGGTGTGGTAACGAGCACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTT                                      <  SRR4302541.5636023/94‑1 (MQ=60)
                                                         AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTT                                      >  SRR4302541.2066420/1‑94 (MQ=60)
                                                         AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTT                                      >  SRR4302541.2208087/1‑94 (MQ=60)
                                                         AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTT                                      >  SRR4302541.4869185/1‑94 (MQ=60)
                                                         AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATAAGGATCACGGAGCGCTCCTGCAGGTT                                      >  SRR4302541.4869186/1‑94 (MQ=60)
                                                          GTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTG                                     >  SRR4302541.4576814/1‑94 (MQ=60)
                                                          GTCAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTG                                     >  SRR4302541.8234331/1‑94 (MQ=60)
                                                           agAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGT                                    <  SRR4302541.5998688/92‑1 (MQ=60)
                                                            CAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTG                                   >  SRR4302541.3654216/1‑94 (MQ=60)
                                                            CAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTG                                   >  SRR4302541.7854983/1‑94 (MQ=60)
                                                            CAAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTG                                   >  SRR4302541.5592466/1‑94 (MQ=60)
                                                             AAGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGA                                  >  SRR4302541.4138012/1‑94 (MQ=60)
                                                              AGCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGAC                                 <  SRR4302541.6827338/94‑1 (MQ=60)
                                                               GCGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACC                                <  SRR4302541.7288362/94‑1 (MQ=60)
                                                                CGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCT                               >  SRR4302541.8090523/1‑94 (MQ=60)
                                                                CGCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCT                               >  SRR4302541.7695451/1‑94 (MQ=60)
                                                                 GCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTT                              <  SRR4302541.5041323/94‑1 (MQ=60)
                                                                 GCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTT                              <  SRR4302541.5759585/94‑1 (MQ=60)
                                                                 GCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTT                              <  SRR4302541.2066911/94‑1 (MQ=60)
                                                                 GCACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTT                              <  SRR4302541.7574262/94‑1 (MQ=60)
                                                                  CACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTC                             >  SRR4302541.8312895/1‑94 (MQ=60)
                                                                   ACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCA                            >  SRR4302541.989684/1‑94 (MQ=60)
                                                                   ACCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCA                            >  SRR4302541.586110/1‑94 (MQ=60)
                                                                    CCACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCAC                           <  SRR4302541.1793826/94‑1 (MQ=60)
                                                                     CACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACC                          <  SRR4302541.4867683/94‑1 (MQ=60)
                                                                     CACGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACC                          <  SRR4302541.5727082/94‑1 (MQ=60)
                                                                       CGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCAC                        <  SRR4302541.8407692/94‑1 (MQ=60)
                                                                       CGTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCAC                        >  SRR4302541.1829872/1‑94 (MQ=60)
                                                                        GTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACC                       >  SRR4302541.6868009/1‑94 (MQ=60)
                                                                        GTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACC                       <  SRR4302541.944539/94‑1 (MQ=60)
                                                                        GTACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACC                       <  SRR4302541.7668285/94‑1 (MQ=60)
                                                                        GTACGGTGTGGTAACGAACACTCGGGAGGCCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACC                       >  SRR4302541.6599198/1‑94 (MQ=60)
                                                                          ACGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA                     <  SRR4302541.6867367/94‑1 (MQ=60)
                                                                           CGGTGTGNTAACGAACACTCGNGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGAT                    <  SRR4302541.5120329/94‑1 (MQ=60)
                                                                           CGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGAT                    <  SRR4302541.5817346/94‑1 (MQ=60)
                                                                           CGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGAT                    >  SRR4302541.188051/1‑94 (MQ=60)
                                                                           CGGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGAT                    <  SRR4302541.6232179/94‑1 (MQ=60)
                                                                            GGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATG                   >  SRR4302541.295758/1‑94 (MQ=60)
                                                                            GGTGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATG                   >  SRR4302541.8483278/1‑94 (MQ=60)
                                                                              TGTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTA                 >  SRR4302541.4223049/1‑94 (MQ=60)
                                                                               GTGGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAG                <  SRR4302541.5734819/94‑1 (MQ=60)
                                                                                 GGTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGA              <  SRR4302541.4849589/94‑1 (MQ=60)
                                                                                  GTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAG             >  SRR4302541.4381959/1‑94 (MQ=60)
                                                                                  GTAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAA             <  SRR4302541.2249700/94‑1 (MQ=60)
                                                                                   TAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGTATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAG            >  SRR4302541.7840021/1‑94 (MQ=60)
                                                                                   TAACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAG            <  SRR4302541.5814304/94‑1 (MQ=60)
                                                                                   TAAAGAACACTCGGGAGGTCTNTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAG            <  SRR4302541.2699633/94‑1 (MQ=60)
                                                                                    AACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGT           >  SRR4302541.4700185/1‑94 (MQ=60)
                                                                                    AACGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGT           <  SRR4302541.5680184/94‑1 (MQ=60)
                                                                                      CGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCA         <  SRR4302541.4227893/94‑1 (MQ=60)
                                                                                      CGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCA         <  SRR4302541.2575024/94‑1 (MQ=60)
                                                                                      CGAACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGGCA         <  SRR4302541.4227894/94‑1 (MQ=60)
                                                                                        AACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACT       <  SRR4302541.6018386/94‑1 (MQ=60)
                                                                                         ACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTT      <  SRR4302541.2632461/94‑1 (MQ=60)
                                                                                         ACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTT      >  SRR4302541.6875553/1‑94 (MQ=60)
                                                                                         ACACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTT      <  SRR4302541.4689140/94‑1 (MQ=60)
                                                                                         ACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTT      <  SRR4302541.8130794/94‑1 (MQ=60)
                                                                                          CACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTC     <  SRR4302541.4263523/94‑1 (MQ=60)
                                                                                          CACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTC     <  SRR4302541.2937212/94‑1 (MQ=60)
                                                                                           ACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCG    <  SRR4302541.5804922/94‑1 (MQ=60)
                                                                                           ACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCG    >  SRR4302541.3890504/1‑94 (MQ=60)
                                                                                           ACTCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCG    <  SRR4302541.4559007/94‑1 (MQ=60)
                                                                                             TCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAA  >  SRR4302541.2697999/1‑94 (MQ=60)
                                                                                             |                                                                                             
TAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAA  >  NC_000913/3471823‑3472009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑