Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,621,612	T→C	intergenic (+199/‑397)	yhhH → / → yhhI	hypothetical protein/putative receptor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,621,612	0	T	C	100.0%	1265.0 / NA	376	intergenic (+199/‑397)	yhhH/yhhI	hypothetical protein/putative receptor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (224/152); total (224/152)

Only 100 of 381 total aligned reads displayed.

AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT  >  NC_000913/3621523‑3621701

aaaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtga                                                                                        >  2:6204910/1‑93 (MQ=21)

 aaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgat                                                                                       >  1:1688093/1‑93 (MQ=18)

 aaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgat                                                                                       >  1:6630858/1‑93 (MQ=21)

   tacatacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgatga                                                                                     <  1:8295921/93‑1 (MQ=18)

    acatacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTgatgat                                                                                    >  1:1205584/1‑93 (MQ=21)

      atacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCg                                                                                  >  2:6921296/1‑93 (MQ=21)

       tacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 <  2:1845498/93‑1 (MQ=255)

       tacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 >  2:6035149/1‑93 (MQ=37)

       tacCAGAAAAGAAAGGCAAGTAAAGAGGATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc                                                                                 >  2:8809577/1‑93 (MQ=255)

           agaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAAtt                                                                             <  2:4254100/93‑1 (MQ=37)

           agaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAAtt                                                                             >  1:3271942/1‑93 (MQ=255)

            gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc                                                                            >  1:6461177/1‑93 (MQ=37)

            gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc                                                                            >  1:2740847/1‑93 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  2:6262647/93‑1 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  1:2391413/93‑1 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           >  1:1410943/1‑93 (MQ=255)

             aaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTcc                                                                           <  1:8398460/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          <  1:7312576/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          <  2:5596616/93‑1 (MQ=255)

              aaagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCt                                                                          >  1:3624195/1‑93 (MQ=255)

               aagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAGGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCtt                                                                         <  1:4841071/93‑1 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  2:6580189/1‑93 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  1:496003/1‑93 (MQ=255)

                agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg                                                                        >  1:5504180/1‑93 (MQ=255)

                 gaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGa                                                                       >  1:5476323/1‑93 (MQ=37)

                 gaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGa                                                                       >  2:5156606/1‑93 (MQ=255)

                  aaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaa                                                                      >  1:1707352/1‑93 (MQ=255)

                   aagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaa                                                                     >  1:1126376/1‑93 (MQ=255)

                    agGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaaa                                                                    <  2:1051717/93‑1 (MQ=255)

                      gCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAgg                                                                  >  1:2953122/1‑93 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 <  2:8667147/93‑1 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 >  2:8443147/1‑93 (MQ=255)

                       cAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGa                                                                 <  1:1832503/93‑1 (MQ=255)

                         aGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAtt                                                               <  2:1332580/93‑1 (MQ=255)

                           tAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTc                                                             <  2:8229350/93‑1 (MQ=255)

                             aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt                                                           <  2:4387074/93‑1 (MQ=255)

                             aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt                                                           >  1:703767/1‑93 (MQ=255)

                              agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc                                                          <  2:8082642/93‑1 (MQ=37)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:1064895/1‑93 (MQ=37)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:551734/1‑93 (MQ=255)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  2:4606106/1‑93 (MQ=255)

                               gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt                                                         >  1:8145230/1‑93 (MQ=37)

                                agTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTg                                                        >  2:5851037/1‑93 (MQ=255)

                                 gTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGc                                                       >  2:7080855/1‑93 (MQ=255)

                                   aTGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCa                                                     <  2:1965893/93‑1 (MQ=255)

                                   aTGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCa                                                     <  2:307405/93‑1 (MQ=255)

                                    tGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCag                                                    >  2:6325711/1‑93 (MQ=255)

                                      gTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCagag                                                  >  1:3047199/1‑93 (MQ=255)

                                          atataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAtt                                              >  2:7383258/1‑93 (MQ=255)

                                          atataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAtt                                              <  2:5062045/93‑1 (MQ=37)

                                           tataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa                                             >  1:3497265/1‑93 (MQ=37)

                                             taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa                                           <  1:5973632/93‑1 (MQ=255)

                                             taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa                                           <  2:4065173/93‑1 (MQ=255)

                                             taataaATGTAAGAAACTAAAGGATGATGAATTATTTCGCTTACCTGATGGTCGTGATTCCTTGAATAGGATTTCATCTGCCAGAGTATTACa                                           >  1:4590916/1‑93 (MQ=11)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         >  2:4682491/1‑93 (MQ=37)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         <  2:7642358/93‑1 (MQ=255)

                                               ataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGt                                         <  2:2064458/93‑1 (MQ=255)

                                                taaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAACAGGATTTCATCTGCCAGAGTATTACAGta                                        >  1:7887957/1‑92 (MQ=255)

                                                taaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGtt                                        <  1:6732907/93‑1 (MQ=25)

                                                 aaaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTa                                       >  2:2907173/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  1:2179687/1‑93 (MQ=18)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  2:3494267/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  2:6166696/1‑93 (MQ=21)

                                                  aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa                                      >  1:2426383/1‑93 (MQ=21)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    <  1:2692438/93‑1 (MQ=21)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    >  1:5669183/1‑93 (MQ=18)

                                                    tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga                                    <  1:3434786/93‑1 (MQ=21)

                                                     gTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAagag                                   >  1:5313711/1‑93 (MQ=21)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 >  1:1311817/1‑93 (MQ=25)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 <  1:8059918/93‑1 (MQ=25)

                                                       aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg                                 <  1:3861312/93‑1 (MQ=25)

                                                        aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg                                >  1:4035609/1‑93 (MQ=25)

                                                        aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg                                >  1:4775424/1‑93 (MQ=255)

                                                         gAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggggg                               <  2:4812916/93‑1 (MQ=255)

                                                         gAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggggg                               >  2:7932997/1‑93 (MQ=255)

                                                          aaaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggggg                              <  2:1567409/93‑1 (MQ=37)

                                                           aaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGc                             >  1:8612723/1‑93 (MQ=37)

                                                               aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa                         >  2:327864/1‑93 (MQ=255)

                                                               aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa                         >  1:206175/1‑93 (MQ=37)

                                                                aaTGATGATGAATTATTTCGCTTACCTGATGATCGCATTTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGAc                        >  1:5815366/1‑93 (MQ=255)

                                                                aaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCATTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGAc                        >  2:3903228/1‑93 (MQ=255)

                                                                  tgatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGc                      <  2:3725132/93‑1 (MQ=37)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     <  1:5178981/93‑1 (MQ=255)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     >  2:4997830/1‑93 (MQ=255)

                                                                   gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCt                     >  1:6365474/1‑93 (MQ=255)

                                                                    atgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTg                    >  2:1686976/1‑93 (MQ=255)

                                                                    atgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTg                    >  1:5069698/1‑93 (MQ=37)

                                                                     tgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGt                   >  1:606982/1‑93 (MQ=255)

                                                                      gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt                  >  2:2454456/1‑93 (MQ=255)

                                                                         gaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGa               >  2:357738/1‑93 (MQ=255)

                                                                          aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt              <  1:1000332/93‑1 (MQ=255)

                                                                          aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt              >  2:7681188/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCGAGACGCTGTTAGATTGGc          >  2:781347/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc          >  1:6243657/1‑93 (MQ=255)

                                                                              attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc          >  1:883202/1‑93 (MQ=255)

                                                                                 tCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAt       <  1:6885120/93‑1 (MQ=37)

                                                                                  cGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAtt      <  2:2271270/93‑1 (MQ=255)

                                                                                     ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa   >  2:7427245/1‑93 (MQ=255)

                                                                                     ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa   >  1:5427288/1‑93 (MQ=255)

                                                                                      tACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAt  <  1:4255446/93‑1 (MQ=255)

AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT  >  NC_000913/3621523‑3621701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.

TGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG  >  NC_000913/3621519‑3621705

TGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACC                                                                                               >  SRR4302541.5194839/1‑94 (MQ=10)

 GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCT                                                                                              <  SRR4302541.7750735/94‑1 (MQ=10)

 GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCT                                                                                              <  SRR4302541.1357820/94‑1 (MQ=10)

 GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCT                                                                                              >  SRR4302541.368141/1‑94 (MQ=10)

   CAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGA                                                                                            >  SRR4302541.4982551/1‑94 (MQ=10)

    AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGAT                                                                                           >  SRR4302541.6698842/1‑94 (MQ=10)

    AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGAT                                                                                           >  SRR4302541.1704677/1‑94 (MQ=10)

    AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGAT                                                                                           >  SRR4302541.1835351/1‑94 (MQ=10)

    AAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGAT                                                                                           <  SRR4302541.8117180/94‑1 (MQ=10)

     AATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATG                                                                                          <  SRR4302541.3539187/94‑1 (MQ=10)

      ATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGA                                                                                         >  SRR4302541.2940759/1‑94 (MQ=10)

      ATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGA                                                                                         >  SRR4302541.1508101/1‑94 (MQ=10)

       TACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAT                                                                                        >  SRR4302541.1217309/1‑94 (MQ=10)

       TACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAT                                                                                        <  SRR4302541.7058508/94‑1 (MQ=10)

       TACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAT                                                                                        <  SRR4302541.1749634/94‑1 (MQ=10)

       TACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAT                                                                                        <  SRR4302541.5201806/94‑1 (MQ=10)

       TACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAT                                                                                        <  SRR4302541.8386133/94‑1 (MQ=10)

        ACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATC                                                                                       <  SRR4302541.638295/94‑1 (MQ=10)

        ACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATC                                                                                       >  SRR4302541.3893424/1‑94 (MQ=10)

        ACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATC                                                                                       <  SRR4302541.6626347/94‑1 (MQ=10)

         CATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCG                                                                                      <  SRR4302541.1071727/94‑1 (MQ=12)

         CATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCG                                                                                      >  SRR4302541.1201170/1‑94 (MQ=12)

         CATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCG                                                                                      >  SRR4302541.813552/1‑94 (MQ=12)

         CATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCG                                                                                      >  SRR4302541.6528336/1‑94 (MQ=12)

          ATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGC                                                                                     >  SRR4302541.6474237/1‑94 (MQ=15)

            ACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAA                                                                                   <  SRR4302541.5464063/94‑1 (MQ=23)

              CAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATT                                                                                 >  SRR4302541.3304949/1‑94 (MQ=25)

               AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC                                                                                >  SRR4302541.6527021/1‑94 (MQ=25)

               AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC                                                                                >  SRR4302541.6454077/1‑94 (MQ=25)

               AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC                                                                                >  SRR4302541.2768336/1‑94 (MQ=25)

               AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC                                                                                >  SRR4302541.2768338/1‑94 (MQ=25)

               AGAAAAGAAAGGCAAGTAAAGAGTATGGGTTATATAATAAATGTAAGAAACTAAATGATGATGACTTATTTCGCTTACCTGATGATCGCAATTC                                                                                >  SRR4302541.2768337/1‑94 (MQ=23)

                GAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCTCAATTCC                                                                               <  SRR4302541.6795264/94‑1 (MQ=9)

                GAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCC                                                                               >  SRR4302541.1424700/1‑94 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              >  SRR4302541.3472488/1‑94 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              <  SRR4302541.2414815/94‑1 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              <  SRR4302541.8489340/94‑1 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              <  SRR4302541.5543809/94‑1 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              >  SRR4302541.7275018/1‑94 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              >  SRR4302541.3472490/1‑94 (MQ=25)

                 AAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCT                                                                              >  SRR4302541.3660935/1‑94 (MQ=25)

                  AAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTT                                                                             <  SRR4302541.958561/94‑1 (MQ=25)

                  AAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTT                                                                             >  SRR4302541.2674254/1‑94 (MQ=25)

                  AAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTT                                                                             <  SRR4302541.7390636/94‑1 (MQ=25)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAGGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            <  SRR4302541.4890419/94‑1 (MQ=24)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            <  SRR4302541.5096610/94‑1 (MQ=25)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            <  SRR4302541.1319757/94‑1 (MQ=25)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            <  SRR4302541.4890418/94‑1 (MQ=25)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            >  SRR4302541.5560558/1‑94 (MQ=25)

                   AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG                                                                            >  SRR4302541.500677/1‑94 (MQ=25)

                    AGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGA                                                                           >  SRR4302541.5532474/1‑94 (MQ=25)

                    AGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGA                                                                           >  SRR4302541.2410262/1‑94 (MQ=25)

                     GAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAA                                                                          >  SRR4302541.5906143/1‑94 (MQ=25)

                     GAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAA                                                                          >  SRR4302541.6491608/1‑94 (MQ=25)

                      AAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAA                                                                         >  SRR4302541.531803/1‑94 (MQ=25)

                      AAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAA                                                                         >  SRR4302541.2439519/1‑94 (MQ=25)

                      AAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAA                                                                         >  SRR4302541.1137006/1‑94 (MQ=25)

                       AAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAA                                                                        >  SRR4302541.1975799/1‑94 (MQ=25)

                       AAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAA                                                                        >  SRR4302541.8384425/1‑94 (MQ=25)

                       AAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTAGTTCGCTTACCTGATGATCGCAATTCCTTGAAAA                                                                        >  SRR4302541.8560073/1‑94 (MQ=24)

                        AGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAG                                                                       <  SRR4302541.3221348/94‑1 (MQ=25)

                        AGGCAAGTAAAGAGTATGGTATATATAATAAATGTAAGAAACTAAATAATAATGAAATATTACGATTACTTGATGATCACAATTCCTTGAAAAG                                                                       <  SRR4302541.7882586/94‑1 (MQ=0)

                         GGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGG                                                                      <  SRR4302541.6985620/94‑1 (MQ=25)

                         GGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGG                                                                      <  SRR4302541.2893403/94‑1 (MQ=25)

                         GGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGG                                                                      >  SRR4302541.2982815/1‑94 (MQ=25)

                          GCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGA                                                                     >  SRR4302541.1721937/1‑94 (MQ=25)

                           CAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAT                                                                    <  SRR4302541.5510269/94‑1 (MQ=25)

                           CAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAT                                                                    <  SRR4302541.1850271/94‑1 (MQ=25)

                            AAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATT                                                                   <  SRR4302541.2372054/94‑1 (MQ=25)

                            AAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATT                                                                   <  SRR4302541.5971231/94‑1 (MQ=25)

                            AAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATT                                                                   <  SRR4302541.4373424/94‑1 (MQ=25)

                             AGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTT                                                                  <  SRR4302541.1595016/94‑1 (MQ=25)

                             AGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTT                                                                  <  SRR4302541.2008680/94‑1 (MQ=25)

                             AGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTT                                                                  <  SRR4302541.6413325/94‑1 (MQ=25)

                               TAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCA                                                                >  SRR4302541.3456569/1‑94 (MQ=25)

                                TAAGAGTAGGGGTTATATAATAAATGGTATCAACTAAAGGATGATCAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT                                                               <  SRR4302541.570775/94‑1 (MQ=6)

                                AAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT                                                               >  SRR4302541.710387/1‑94 (MQ=25)

                                AAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT                                                               <  SRR4302541.6823662/94‑1 (MQ=25)

                                AAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT                                                               <  SRR4302541.570773/94‑1 (MQ=25)

                                 AAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATC                                                              >  SRR4302541.6893892/1‑94 (MQ=25)

                                  AGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCT                                                             >  SRR4302541.8234314/1‑94 (MQ=25)

                                  AGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCT                                                             >  SRR4302541.1189983/1‑94 (MQ=25)

                                  AGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCT                                                             <  SRR4302541.6024965/94‑1 (MQ=25)

                                   GAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTG                                                            <  SRR4302541.3168019/94‑1 (MQ=25)

                                   GAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTG                                                            >  SRR4302541.1415240/1‑94 (MQ=25)

                                   GAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTG                                                            >  SRR4302541.2990558/1‑94 (MQ=25)

                                    AGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGC                                                           <  SRR4302541.3902623/94‑1 (MQ=25)

                                    AGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGC                                                           >  SRR4302541.2842551/1‑94 (MQ=25)

                                    AGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGC                                                           >  SRR4302541.334105/1‑94 (MQ=25)

                                     GTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCC                                                          >  SRR4302541.2714089/1‑94 (MQ=25)

                                      TATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCA                                                         >  SRR4302541.1569088/1‑94 (MQ=25)

                                      TATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCA                                                         >  SRR4302541.5388812/1‑94 (MQ=25)

                                      TATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCA                                                         >  SRR4302541.7297899/1‑94 (MQ=25)

                                        TGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGA                                                       >  SRR4302541.6137306/1‑94 (MQ=25)

                                         GGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAG                                                      >  SRR4302541.4020194/1‑94 (MQ=25)

                                         GGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAG                                                      >  SRR4302541.3078014/1‑94 (MQ=25)

                                            TTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAT                                                   >  SRR4302541.4977867/1‑94 (MQ=25)

                                            TTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAT                                                   <  SRR4302541.6790696/94‑1 (MQ=25)

                                              ATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTTCCAGAGTATTA                                                 >  SRR4302541.5332727/1‑94 (MQ=24)

                                               TATAATAAAGGT‑AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACA                                               <  SRR4302541.5177804/94‑1 (MQ=8)

                                                ATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACA                                               >  SRR4302541.1270707/1‑94 (MQ=25)

                                                ATAATAAATGTAAGAAACTAAAGGATGATGAATTATTTCGCTTACCTGATGGTCGTGATTCCTTGAATAGGATTTCATCTGCCAGAGTATTACA                                               >  SRR4302541.4637466/1‑94 (MQ=20)

                                                 TAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAG                                              <  SRR4302541.6174058/94‑1 (MQ=25)

                                                 TAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAG                                              >  SRR4302541.4434315/1‑94 (MQ=25)

                                                 TAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAG                                              <  SRR4302541.6034602/94‑1 (MQ=25)

                                                 TAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAG                                              >  SRR4302541.4882406/1‑94 (MQ=25)

                                                 TAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAGCTGCCAGAGTATTACAG                                              <  SRR4302541.1151262/94‑1 (MQ=24)

                                                  AATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGT                                             >  SRR4302541.4747079/1‑94 (MQ=23)

                                                  AATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGT                                             >  SRR4302541.3524342/1‑94 (MQ=23)

                                                  AATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGT                                             >  SRR4302541.6647369/1‑94 (MQ=23)

                                                  AATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGT                                             >  SRR4302541.3973993/1‑94 (MQ=23)

                                                   ATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAACAGGATTTCATCTGCCAGAGTATTACAGTA                                            >  SRR4302541.7974679/1‑94 (MQ=19)

                                                   ATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTT                                            >  SRR4302541.7974680/1‑94 (MQ=20)

                                                    TAAATGTAAGAATCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTA                                           <  SRR4302541.4672329/94‑1 (MQ=14)

                                                     AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA                                          >  SRR4302541.2200750/1‑94 (MQ=12)

                                                     AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA                                          >  SRR4302541.7246299/1‑94 (MQ=12)

                                                     AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA                                          >  SRR4302541.2450366/1‑94 (MQ=12)

                                                     AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA                                          <  SRR4302541.5050145/94‑1 (MQ=12)

                                                      AATGTAAGAAACTCAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAG                                         >  SRR4302541.10094/1‑94 (MQ=9)

                                                      AATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAG                                         <  SRR4302541.7623225/94‑1 (MQ=10)

                                                      AATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAG                                         >  SRR4302541.4894667/1‑94 (MQ=10)

                                                       ATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGA                                        >  SRR4302541.369231/1‑94 (MQ=10)

                                                       ATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGA                                        >  SRR4302541.5727059/1‑94 (MQ=10)

                                                        TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG                                       <  SRR4302541.5515362/94‑1 (MQ=10)

                                                        TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG                                       >  SRR4302541.5368411/1‑94 (MQ=10)

                                                        TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG                                       <  SRR4302541.3469098/94‑1 (MQ=10)

                                                         GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG                                      >  SRR4302541.4334867/1‑94 (MQ=10)

                                                         GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG                                      >  SRR4302541.2005525/1‑94 (MQ=10)

                                                         GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG                                      >  SRR4302541.2445204/1‑94 (MQ=10)

                                                         GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG                                      >  SRR4302541.3823214/1‑94 (MQ=10)

                                                          TAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGG                                     >  SRR4302541.8155715/1‑94 (MQ=12)

                                                          TAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGG                                     >  SRR4302541.1324732/1‑94 (MQ=12)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    >  SRR4302541.4824178/1‑94 (MQ=15)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    >  SRR4302541.4075465/1‑94 (MQ=15)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    <  SRR4302541.3900153/94‑1 (MQ=15)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    <  SRR4302541.8148473/94‑1 (MQ=15)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    >  SRR4302541.2387599/1‑94 (MQ=15)

                                                           AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG                                    >  SRR4302541.5270925/1‑94 (MQ=15)

                                                            AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG                                   <  SRR4302541.57932/94‑1 (MQ=20)

                                                            AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG                                   <  SRR4302541.842887/94‑1 (MQ=20)

                                                             GAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGG                                  <  SRR4302541.207994/94‑1 (MQ=23)

                                                             GAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGG                                  <  SRR4302541.4155917/94‑1 (MQ=23)

                                                             GAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGG                                  <  SRR4302541.3047438/94‑1 (MQ=23)

                                                             GAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGG                                  <  SRR4302541.8233348/94‑1 (MQ=23)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC                                 >  SRR4302541.8705078/1‑94 (MQ=25)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC                                 >  SRR4302541.8753160/1‑94 (MQ=25)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC                                 >  SRR4302541.8847058/1‑94 (MQ=25)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC                                 >  SRR4302541.1340020/1‑94 (MQ=25)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC                                 >  SRR4302541.4865723/1‑94 (MQ=25)

                                                              AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGA                                 >  SRR4302541.2090190/1‑94 (MQ=22)

                                                               AACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCA                                >  SRR4302541.4234054/1‑94 (MQ=25)

                                                                ACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAA                               >  SRR4302541.1412366/1‑94 (MQ=25)

                                                                 CTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAG                              >  SRR4302541.8452710/1‑94 (MQ=25)

                                                                  TAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGA                             >  SRR4302541.3580895/1‑94 (MQ=25)

                                                                  TAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGA                             >  SRR4302541.207733/1‑94 (MQ=25)

                                                                   AAATGATGATGAATTATTTCGCTTACCTGATGATCGCATTTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGAC                            >  SRR4302541.5874460/1‑94 (MQ=24)

                                                                     ATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATGTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGC                          >  SRR4302541.2998944/1‑94 (MQ=24)

                                                                      TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCT                         >  SRR4302541.5532711/1‑94 (MQ=25)

                                                                      TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCT                         >  SRR4302541.1291276/1‑94 (MQ=25)

                                                                      TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCT                         >  SRR4302541.6430561/1‑94 (MQ=25)

                                                                       GATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTG                        >  SRR4302541.8910148/1‑94 (MQ=25)

                                                                       GATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTG                        >  SRR4302541.5121810/1‑94 (MQ=25)

                                                                       GATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTG                        <  SRR4302541.5232264/94‑1 (MQ=25)

                                                                       GATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTG                        >  SRR4302541.6059103/1‑94 (MQ=25)

                                                                        ATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGT                       >  SRR4302541.612695/1‑94 (MQ=25)

                                                                         TGATGAATTATTTCGCTTACCTGGTGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTT                      >  SRR4302541.7612521/1‑94 (MQ=24)

                                                                          GATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTA                     <  SRR4302541.8588922/94‑1 (MQ=25)

                                                                           ATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAG                    <  SRR4302541.1732781/94‑1 (MQ=25)

                                                                           ATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAG                    <  SRR4302541.5665560/94‑1 (MQ=25)

                                                                             GAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAT                  >  SRR4302541.8633221/1‑94 (MQ=25)

                                                                             GAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCAAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTGGAT                  >  SRR4302541.2759812/1‑94 (MQ=23)

                                                                              AATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATT                 <  SRR4302541.1009634/94‑1 (MQ=25)

                                                                               ATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTG                <  SRR4302541.6313238/94‑1 (MQ=25)

                                                                                TTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGG               >  SRR4302541.6787745/1‑94 (MQ=25)

                                                                                TTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGG               >  SRR4302541.7952591/1‑94 (MQ=25)

                                                                                 TATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGC              >  SRR4302541.6307442/1‑94 (MQ=25)

                                                                                 TATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGC              >  SRR4302541.891288/1‑94 (MQ=25)

                                                                                  ATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCA             <  SRR4302541.3410052/94‑1 (MQ=25)

                                                                                    TTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAT           >  SRR4302541.5843039/1‑94 (MQ=25)

                                                                                    TTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAT           >  SRR4302541.3653168/1‑94 (MQ=25)

                                                                                    TTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAT           >  SRR4302541.5531772/1‑94 (MQ=25)

                                                                                    TTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAT           <  SRR4302541.842700/94‑1 (MQ=25)

                                                                                     TCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATT          <  SRR4302541.6958610/94‑1 (MQ=25)

                                                                                      CGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTG         <  SRR4302541.1707822/94‑1 (MQ=25)

                                                                                       GCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGA        <  SRR4302541.5815448/94‑1 (MQ=25)

                                                                                       GCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGA        <  SRR4302541.6075212/94‑1 (MQ=25)

                                                                                        CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA       >  SRR4302541.8347302/1‑94 (MQ=28)

                                                                                        CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA       >  SRR4302541.5145233/1‑94 (MQ=28)

                                                                                        CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA       >  SRR4302541.5482970/1‑94 (MQ=28)

                                                                                        CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA       >  SRR4302541.2154359/1‑94 (MQ=28)

                                                                                        CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA       >  SRR4302541.2472478/1‑94 (MQ=28)

                                                                                         TTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT      <  SRR4302541.6867763/94‑1 (MQ=30)

                                                                                          TACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATT     >  SRR4302541.5186108/1‑94 (MQ=33)

                                                                                          TACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATT     <  SRR4302541.4297985/94‑1 (MQ=33)

                                                                                           ACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTC    <  SRR4302541.6959176/94‑1 (MQ=36)

                                                                                            CCTGATGATTGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCT   <  SRR4302541.55004/94‑1 (MQ=35)

                                                                                            CCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCT   <  SRR4302541.7734937/94‑1 (MQ=39)

                                                                                            CCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCT   <  SRR4302541.802335/94‑1 (MQ=39)

                                                                                            CCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCG   >  SRR4302541.6628001/1‑94 (MQ=36)

                                                                                             CTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG  >  SRR4302541.7965669/1‑94 (MQ=39)

TGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG  >  NC_000913/3621519‑3621705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`