Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,621,612 |
T→C |
intergenic (+199/‑397) |
yhhH → / → yhhI |
hypothetical protein/putative receptor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,621,612 | 0 | T | C | 100.0%
| 542.8
/ NA
| 163 | intergenic (+199/‑397) | yhhH/yhhI | hypothetical protein/putative receptor |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (111/52); total (111/52) |
Only 100 of 166 total aligned reads displayed.
CAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT > NC_000913/3621522‑3621701
|
cAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtg > 2:398687/1‑93 (MQ=18)
aaaTACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtga > 1:2685241/1‑93 (MQ=21)
tacatacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCtgatga > 2:5938969/1‑93 (MQ=21)
tacCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGc < 1:817853/93‑1 (MQ=255)
acCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCa > 1:3892505/1‑93 (MQ=255)
gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc > 1:3456056/1‑93 (MQ=255)
gaaaagaaaGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTc > 2:4165157/1‑93 (MQ=255)
aagaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCtt < 1:4827453/93‑1 (MQ=37)
agaaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTg < 1:1576213/93‑1 (MQ=37)
aaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaa > 2:1854387/1‑93 (MQ=255)
aaagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaa > 2:6362060/1‑93 (MQ=255)
aagGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaa > 1:5377802/1‑93 (MQ=37)
agGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGaaaa > 2:6364030/1‑93 (MQ=37)
ggCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATTGCAATTCCTTGAAAAg > 1:4841447/1‑93 (MQ=255)
ggCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAg > 1:1739917/1‑93 (MQ=37)
ggCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAg > 2:902241/1‑93 (MQ=255)
gCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAgg > 1:2357606/1‑93 (MQ=255)
aGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAtt > 1:2947138/1‑93 (MQ=37)
gTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAttt > 2:3671660/1‑93 (MQ=255)
gTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAttt > 1:1877567/1‑93 (MQ=255)
gTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGAttt > 2:4968878/1‑93 (MQ=255)
tAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTc < 2:3918378/93‑1 (MQ=255)
aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt > 1:4033761/1‑93 (MQ=255)
aaGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAt > 2:2884221/1‑93 (MQ=255)
agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc > 2:4401644/1‑93 (MQ=255)
agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc > 1:2387845/1‑93 (MQ=255)
agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc > 2:912460/1‑93 (MQ=255)
agagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATc < 1:1476895/93‑1 (MQ=255)
gagTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCt > 2:6214414/1‑93 (MQ=255)
agTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTg < 1:2033507/93‑1 (MQ=37)
agTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTg > 1:4012317/1‑93 (MQ=255)
gTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGc > 2:3475953/1‑93 (MQ=255)
gTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGc > 1:1873729/1‑93 (MQ=37)
tATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGcc > 2:3009121/1‑93 (MQ=255)
tGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCag > 2:5686288/1‑93 (MQ=255)
ggTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCaga > 1:6111081/1‑93 (MQ=255)
gTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCagag < 1:4391205/93‑1 (MQ=255)
tatataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGAGCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTAt < 2:3836225/93‑1 (MQ=255)
tataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa > 2:4998270/1‑93 (MQ=255)
tataATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa > 1:5844422/1‑93 (MQ=255)
ataataAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTAc > 1:4630749/1‑93 (MQ=255)
taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa > 2:76101/1‑93 (MQ=255)
taataaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACa > 2:2512348/1‑93 (MQ=255)
taaATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGtt < 1:6129706/93‑1 (MQ=255)
aaaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTa > 1:2306835/1‑93 (MQ=25)
aaTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTaa > 1:213847/1‑93 (MQ=21)
aTGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAag > 1:4931733/1‑93 (MQ=18)
tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga < 1:4412362/93‑1 (MQ=21)
tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga > 1:3075527/1‑93 (MQ=21)
tGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAaga < 1:3266480/93‑1 (MQ=21)
tAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgg > 1:5942544/1‑93 (MQ=21)
tAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgg > 2:108142/1‑93 (MQ=21)
aaGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggg < 2:2614479/93‑1 (MQ=21)
aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg > 1:3583764/1‑93 (MQ=25)
aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg < 1:1485059/93‑1 (MQ=25)
aGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggg > 1:4997970/1‑93 (MQ=255)
gAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAggggg > 1:5138799/1‑93 (MQ=255)
aaaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAgggggg > 2:5835288/1‑93 (MQ=255)
aaCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGc > 2:2528128/1‑93 (MQ=255)
aCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa > 1:3649599/1‑76 (MQ=19)
aCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTa < 2:3649599/76‑1 (MQ=19)
aCTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCa > 1:6080630/1‑93 (MQ=255)
cTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCaa < 2:174797/93‑1 (MQ=255)
aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa > 1:883070/1‑93 (MQ=37)
aaaTGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGa > 1:1594429/1‑93 (MQ=255)
tgatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGc < 1:2953313/93‑1 (MQ=255)
tgatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGc < 2:5278221/93‑1 (MQ=255)
tgatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGc < 1:6165114/93‑1 (MQ=37)
gatgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGGATTACAGTTAAGAGGGGGGCAAGACGCt > 1:683399/1‑93 (MQ=255)
tgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGt > 1:193581/1‑93 (MQ=255)
tgatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGt < 1:1705316/93‑1 (MQ=255)
gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt > 2:948247/1‑93 (MQ=255)
gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt > 1:271064/1‑93 (MQ=37)
gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt > 1:6441316/1‑93 (MQ=37)
gatgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGtt < 1:4758841/93‑1 (MQ=37)
tgaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAg > 1:304121/1‑93 (MQ=255)
gaATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGa > 1:1232200/1‑93 (MQ=255)
aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGGAAAGGATTTCATCTCCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt < 2:152523/93‑1 (MQ=255)
aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGATGGGGGCAAGACGCTGTTAGAt > 2:3020253/1‑93 (MQ=255)
aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt > 1:3015779/1‑93 (MQ=255)
aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt < 1:4243664/93‑1 (MQ=37)
aaTTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAt < 2:4701426/93‑1 (MQ=255)
attattTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAtt > 1:5547038/1‑93 (MQ=255)
ttattTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTg > 2:2214624/1‑93 (MQ=255)
ttattTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTg > 2:1123770/1‑93 (MQ=255)
tattTCGGTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTgg > 1:6358196/1‑93 (MQ=255)
tattTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTgg > 2:5490172/1‑93 (MQ=255)
tattTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTgg > 1:260260/1‑93 (MQ=255)
attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc > 1:5811115/1‑93 (MQ=37)
attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc > 1:6131482/1‑93 (MQ=255)
attTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGc < 1:2792970/93‑1 (MQ=255)
tttCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCa > 2:2387997/1‑93 (MQ=255)
tttCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCa < 1:6293238/93‑1 (MQ=255)
tttCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCa < 1:3807058/93‑1 (MQ=255)
cGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAtt < 2:4802636/93‑1 (MQ=255)
cGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAAtt < 2:2111365/93‑1 (MQ=255)
ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa > 1:1083220/1‑93 (MQ=255)
ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa > 1:390392/1‑93 (MQ=255)
ttACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGaa > 2:5340877/1‑93 (MQ=255)
tACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAt > 1:5282653/1‑93 (MQ=255)
|
CAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT > NC_000913/3621522‑3621701
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG > NC_000913/3621520‑3621705
|
GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCT > SRR4302534.2295381/1‑94 (MQ=10)
CAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGA > SRR4302534.2756216/1‑94 (MQ=10)
ACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATC < SRR4302534.6328357/94‑1 (MQ=10)
ACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATC > SRR4302534.2865727/1‑94 (MQ=10)
TACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCA > SRR4302534.3996995/1‑94 (MQ=20)
TACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCA < SRR4302534.838417/94‑1 (MQ=20)
AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC > SRR4302534.496838/1‑94 (MQ=25)
AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC < SRR4302534.3706009/94‑1 (MQ=25)
AGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTC > SRR4302534.3548959/1‑94 (MQ=25)
GAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCC > SRR4302534.4476470/1‑94 (MQ=25)
GAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCC > SRR4302534.3426673/1‑94 (MQ=25)
AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG < SRR4302534.4958443/94‑1 (MQ=25)
AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG > SRR4302534.1929849/1‑94 (MQ=25)
AAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTG > SRR4302534.4714281/1‑94 (MQ=25)
AGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGA < SRR4302534.1617451/94‑1 (MQ=25)
AAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAA > SRR4302534.5522698/1‑94 (MQ=25)
AAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAA > SRR4302534.2380511/1‑94 (MQ=25)
AGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATTGCAATTCCTTGAAAAG > SRR4302534.4972788/1‑94 (MQ=24)
AGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAG > SRR4302534.1785095/1‑94 (MQ=25)
AGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAG < SRR4302534.3282610/94‑1 (MQ=25)
GGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGG > SRR4302534.2420176/1‑94 (MQ=25)
GCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGA > SRR4302534.4090357/1‑94 (MQ=25)
AAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATT > SRR4302534.3024463/1‑94 (MQ=25)
AGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTT > SRR4302534.1926457/1‑94 (MQ=25)
TAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCA > SRR4302534.2628915/1‑94 (MQ=25)
AAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT < SRR4302534.4002611/94‑1 (MQ=25)
AAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCAT > SRR4302534.4141894/1‑94 (MQ=25)
AAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATC > SRR4302534.2451302/1‑94 (MQ=25)
AGAGTATGGTTTATATAATAATGGTAAGAAACTAAATGAGGATGAATTATTTCGCTTACCTGATAATCGCAATTCCTTGAAAAGAATTTCTTCT > SRR4302534.3112199/1‑94 (MQ=19)
AGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCT < SRR4302534.1515740/94‑1 (MQ=25)
AGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCT < SRR4302534.4339204/94‑1 (MQ=25)
GAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTG > SRR4302534.4119786/1‑94 (MQ=25)
AGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGC > SRR4302534.1922489/1‑94 (MQ=25)
AGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGC < SRR4302534.2086682/94‑1 (MQ=25)
TATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCA > SRR4302534.5350234/1‑94 (MQ=25)
TGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGA > SRR4302534.6277311/1‑94 (MQ=25)
GTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGT < SRR4302534.4509631/94‑1 (MQ=25)
GTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGT < SRR4302534.6433813/94‑1 (MQ=25)
TATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATT < SRR4302534.5648283/94‑1 (MQ=25)
ATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTA > SRR4302534.483113/1‑94 (MQ=25)
ATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTA > SRR4302534.6003093/1‑94 (MQ=25)
TATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTAC < SRR4302534.5875082/94‑1 (MQ=25)
TATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTAC > SRR4302534.4756410/1‑94 (MQ=25)
ATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACA > SRR4302534.6207813/1‑94 (MQ=25)
AATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGT < SRR4302534.6063458/94‑1 (MQ=23)
TAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTA < SRR4302534.6296446/94‑1 (MQ=15)
TAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTA > SRR4302534.2368067/1‑94 (MQ=15)
AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA > SRR4302534.1542641/1‑94 (MQ=12)
AAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAA > SRR4302534.219454/1‑94 (MQ=12)
AATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAG > SRR4302534.5065401/1‑94 (MQ=10)
AATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAG < SRR4302534.1299483/94‑1 (MQ=10)
ATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGA > SRR4302534.3156317/1‑94 (MQ=10)
TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG < SRR4302534.3353474/94‑1 (MQ=10)
TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG < SRR4302534.4531464/94‑1 (MQ=10)
TGTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAG > SRR4302534.2976598/1‑94 (MQ=10)
GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG > SRR4302534.6103888/1‑94 (MQ=10)
GTAAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGG < SRR4302534.2228968/94‑1 (MQ=10)
AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG > SRR4302534.5133116/1‑94 (MQ=15)
AAGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGG > SRR4302534.3680165/1‑94 (MQ=15)
AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG > SRR4302534.6293107/1‑94 (MQ=20)
AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG > SRR4302534.5277492/1‑94 (MQ=20)
AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG < SRR4302534.1524133/94‑1 (MQ=20)
AGAAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGG > SRR4302534.162817/1‑94 (MQ=20)
AAACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGC > SRR4302534.699060/1‑94 (MQ=25)
AACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAatctatagatcggaa > SRR4302534.3747679/1‑79 (MQ=10)
AACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCA > SRR4302534.6571689/1‑94 (MQ=25)
AACTAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCA > SRR4302534.6246007/1‑94 (MQ=25)
TAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGA > SRR4302534.905409/1‑94 (MQ=25)
TAAATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGA > SRR4302534.1636109/1‑94 (MQ=25)
TAAATGATGATGAATTATTTCGATTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGCGGGGGGCAAGC > SRR4302534.3883885/1‑94 (MQ=23)
AATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACG > SRR4302534.3064236/1‑94 (MQ=25)
ATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGC > SRR4302534.5154539/1‑94 (MQ=25)
ATGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGC > SRR4302534.1770645/1‑94 (MQ=25)
TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCT < SRR4302534.6332803/94‑1 (MQ=25)
TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCT < SRR4302534.3030738/94‑1 (MQ=25)
TGATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGGATTACAGTTAAGAGGGGGGCAAGACGCT > SRR4302534.700085/1‑94 (MQ=24)
ATGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGT > SRR4302534.198646/1‑94 (MQ=25)
TGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTT < SRR4302534.1749621/94‑1 (MQ=25)
TGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTT > SRR4302534.278084/1‑94 (MQ=25)
TGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTT < SRR4302534.2745535/94‑1 (MQ=25)
TGATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTT > SRR4302534.6614904/1‑94 (MQ=25)
GATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTA < SRR4302534.4888060/94‑1 (MQ=25)
ATGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAG > SRR4302534.311965/1‑94 (MQ=25)
TGAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGA > SRR4302534.1264662/1‑94 (MQ=25)
GAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAT > SRR4302534.3094725/1‑94 (MQ=25)
GAATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGAT < SRR4302534.4961244/94‑1 (MQ=25)
AATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATT < SRR4302534.4358112/94‑1 (MQ=25)
AATTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATT > SRR4302534.5696770/1‑94 (MQ=25)
TTATTTCGGTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGG > SRR4302534.6529907/1‑94 (MQ=24)
TTATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGG > SRR4302534.267027/1‑94 (MQ=25)
TATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGC > SRR4302534.6298275/1‑94 (MQ=25)
TATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGC > SRR4302534.5968842/1‑94 (MQ=25)
ATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCA < SRR4302534.2866433/94‑1 (MQ=25)
ATTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCA > SRR4302534.887185/1‑94 (MQ=25)
TTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAA < SRR4302534.3909277/94‑1 (MQ=25)
TTTCGCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAA < SRR4302534.6463486/94‑1 (MQ=25)
GCTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGA > SRR4302534.1792373/1‑94 (MQ=25)
CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA > SRR4302534.1111390/1‑94 (MQ=28)
CTTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAA > SRR4302534.400369/1‑94 (MQ=28)
TTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT > SRR4302534.5425280/1‑94 (MQ=30)
TTACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAAT > SRR4302534.2075079/1‑94 (MQ=30)
TACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATT > SRR4302534.3772545/1‑94 (MQ=33)
TACCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATT > SRR4302534.3147437/1‑94 (MQ=33)
ACCTGATGATCGCAATTCCTTGAAAAGGGTTTCATCTGCCAGCGTATTACAGCTGAGAGGGGGGCAAGACGCTGTTAGATTGGCACTTGAATTT > SRR4302534.2306485/1‑94 (MQ=26)
CCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCT < SRR4302534.1223986/94‑1 (MQ=39)
CCTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCT < SRR4302534.5642197/94‑1 (MQ=39)
CTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG > SRR4302534.3905436/1‑94 (MQ=39)
CTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG > SRR4302534.3739313/1‑94 (MQ=39)
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GTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTG > NC_000913/3621520‑3621705
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
