Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,629,781 A→G V147A (GTT→GCT)  yhiJ ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,629,7810AG99.8% 1399.9 / ‑5.1 397V147A (GTT→GCT) yhiJhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (196/200);  total (196/201)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01

Only 100 of 405 total aligned reads displayed.

GGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG  >  NC_000913/3629691‑3629870
                                                                                          |                                                                                         
ggTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTgcagca                                                                                         <  2:1104795/93‑1 (MQ=255)
  ttttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatc                                                                                       >  2:3558914/1‑93 (MQ=255)
   tttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatca                                                                                      <  1:8400502/93‑1 (MQ=255)
    ttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatcat                                                                                     <  2:5218266/93‑1 (MQ=255)
    ttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatcat                                                                                     <  2:3349255/93‑1 (MQ=255)
     tATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAtt                                                                                    <  2:2170551/93‑1 (MQ=255)
      aTCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTa                                                                                   >  1:6522186/1‑93 (MQ=255)
       tCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAg                                                                                  >  2:5340248/1‑93 (MQ=255)
       tCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTCCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAg                                                                                  <  2:1294392/93‑1 (MQ=255)
         aTTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCa                                                                                >  2:3866784/1‑93 (MQ=255)
         aTTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGCAACTGCAGCATCATTAGCa                                                                                >  2:1793019/1‑93 (MQ=255)
           tGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAtt                                                                              >  2:2986881/1‑93 (MQ=255)
            gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa                                                                             <  1:1263690/93‑1 (MQ=255)
            gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa                                                                             <  2:2741858/93‑1 (MQ=255)
            gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa                                                                             <  2:1346649/93‑1 (MQ=255)
            gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa                                                                             <  1:4641411/93‑1 (MQ=255)
            gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa                                                                             <  1:1724298/93‑1 (MQ=255)
             tttCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAt                                                                            >  1:5733814/1‑93 (MQ=255)
              ttCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATc                                                                           >  2:3799821/1‑93 (MQ=255)
                 gAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAtt                                                                        >  1:376815/1‑93 (MQ=255)
                 gAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAtt                                                                        >  1:7911506/1‑93 (MQ=255)
                 gAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAtt                                                                        <  1:5018063/93‑1 (MQ=255)
                  aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt                                                                       <  2:4583367/93‑1 (MQ=255)
                  aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt                                                                       <  2:7348958/93‑1 (MQ=255)
                  aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGCGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt                                                                       <  1:3521638/93‑1 (MQ=255)
                   aTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTa                                                                      <  2:3502695/93‑1 (MQ=255)
                   aTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTa                                                                      <  1:5996207/93‑1 (MQ=255)
                     ttAATATCAGATACATTATATTTCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACt                                                                    <  2:4027229/93‑1 (MQ=255)
                     ttAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCGGCATCATTAGCATTATCATTTACt                                                                    <  1:4464130/93‑1 (MQ=255)
                     ttAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACt                                                                    <  1:6826148/93‑1 (MQ=255)
                     ttAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACt                                                                    >  1:7027623/1‑93 (MQ=255)
                      tAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTg                                                                   <  2:4095857/93‑1 (MQ=255)
                        atatCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTc                                                                 >  1:3662373/1‑93 (MQ=255)
                         tatCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCGTCATTAGCATTATCATTTACTGTCa                                                                >  1:5069820/1‑93 (MQ=255)
                         tatCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCa                                                                >  1:5504807/1‑93 (MQ=255)
                          atCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCat                                                               >  1:2336115/1‑93 (MQ=255)
                           tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata                                                              <  1:3105520/93‑1 (MQ=255)
                           tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata                                                              >  2:4412516/1‑93 (MQ=255)
                           tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata                                                              <  2:8326803/93‑1 (MQ=255)
                           tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata                                                              >  1:4005863/1‑93 (MQ=255)
                            cAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCatat                                                             >  2:656148/1‑93 (MQ=255)
                             aGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatt                                                            >  1:151361/1‑93 (MQ=255)
                              gATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatta                                                           <  2:3671372/93‑1 (MQ=255)
                              gATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatta                                                           <  2:8134941/93‑1 (MQ=255)
                              gATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatta                                                           >  1:8820909/1‑93 (MQ=255)
                               aTACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtattat                                                          <  1:5882545/93‑1 (MQ=255)
                                 aCATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAttatta                                                        <  1:179703/93‑1 (MQ=255)
                                   aTTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAg                                                      >  2:6143259/1‑93 (MQ=255)
                                   aTTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAg                                                      >  1:2186483/1‑93 (MQ=255)
                                   aTTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAg                                                      >  2:419288/1‑93 (MQ=255)
                                   aTTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAg                                                      >  1:3361700/1‑93 (MQ=255)
                                    ttATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGt                                                     <  1:1353725/93‑1 (MQ=255)
                                    ttATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAGCATTTACTGTCATATTATTAAGt                                                     >  2:6286332/1‑93 (MQ=255)
                                     tataTTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGta                                                    >  1:1944424/1‑93 (MQ=255)
                                       tatTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaaa                                                  <  1:4546577/93‑1 (MQ=255)
                                       tatTGCGATATTTTCCAGTCCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaaa                                                  <  1:8572558/93‑1 (MQ=255)
                                         ttGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaaata                                                >  2:344374/1‑93 (MQ=255)
                                           gCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaaataaa                                              <  1:722775/93‑1 (MQ=255)
                                              atatTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACaa                                           >  1:7842895/1‑93 (MQ=255)
                                               tatTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAAt                                          <  1:7181143/93‑1 (MQ=255)
                                                atTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATa                                         >  2:3129911/1‑93 (MQ=255)
                                                   ttccagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTg                                      >  2:6655577/1‑93 (MQ=255)
                                                    tccagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGc                                     >  2:1648488/1‑93 (MQ=255)
                                                    tccagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGc                                     >  2:1405879/1‑93 (MQ=255)
                                                     ccagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCa                                    >  2:57872/1‑93 (MQ=255)
                                                      cagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAc                                   >  2:8098542/1‑93 (MQ=255)
                                                      cagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAc                                   >  1:2731212/1‑93 (MQ=255)
                                                       agttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAcc                                  >  1:4808348/1‑93 (MQ=255)
                                                       agttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAAAAATACTGCAcc                                  >  2:7020557/1‑93 (MQ=255)
                                                        gttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCa                                 >  1:5543956/1‑93 (MQ=255)
                                                        gttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCa                                 >  1:1093463/1‑93 (MQ=255)
                                                        gttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCa                                 <  1:2930217/93‑1 (MQ=255)
                                                           ccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAtt                              <  1:5409967/93‑1 (MQ=255)
                                                            cagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTa                             >  2:2288383/1‑93 (MQ=255)
                                                            cagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTa                             <  1:7702054/93‑1 (MQ=255)
                                                             agATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTaa                            >  1:5825628/1‑93 (MQ=255)
                                                             agATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTaa                            >  1:6223493/1‑93 (MQ=255)
                                                              gATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAat                           >  1:757672/1‑93 (MQ=255)
                                                              gATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAat                           <  2:2258661/93‑1 (MQ=255)
                                                              gATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAat                           <  1:6642786/93‑1 (MQ=255)
                                                              gATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAat                           >  2:6163986/1‑93 (MQ=255)
                                                               aTGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAata                          >  1:8166065/1‑93 (MQ=255)
                                                                tGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAatat                         <  2:717709/93‑1 (MQ=255)
                                                                     ttGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGta                    <  2:8411419/93‑1 (MQ=255)
                                                                     ttGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGta                    <  2:6448272/93‑1 (MQ=255)
                                                                      tGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtat                   <  2:2527222/93‑1 (MQ=255)
                                                                         aCGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtattat                <  2:8485961/93‑1 (MQ=255)
                                                                            aCTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCaa             >  1:2452334/1‑93 (MQ=255)
                                                                            aCTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCaa             >  2:2049403/1‑93 (MQ=255)
                                                                              tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga           <  2:7548617/93‑1 (MQ=255)
                                                                              tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga           >  2:8732283/1‑93 (MQ=255)
                                                                              tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga           <  1:8014661/93‑1 (MQ=255)
                                                                              tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga           <  2:5123238/93‑1 (MQ=255)
                                                                              tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga           <  2:4748496/93‑1 (MQ=255)
                                                                                aGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAagaga         <  2:6730859/93‑1 (MQ=255)
                                                                                  tAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGc       <  1:3585195/93‑1 (MQ=255)
                                                                                  tAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGc       <  2:5561381/93‑1 (MQ=255)
                                                                                    aCTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCaa     <  2:7897326/93‑1 (MQ=255)
                                                                                     cTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAc    <  2:1957290/93‑1 (MQ=255)
                                                                                      tGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAcc   >  2:5939441/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG  >  NC_000913/3629691‑3629870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 201 total aligned reads displayed.
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT  >  NC_000913/3629688‑3629874
                                                                                             |                                                                                             
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAG                                                                                               >  SRR4302541.909829/1‑94 (MQ=60)
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAG                                                                                               >  SRR4302541.34088/1‑94 (MQ=60)
 GGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGC                                                                                              >  SRR4302541.8688247/1‑94 (MQ=60)
 GGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGC                                                                                              <  SRR4302541.139012/94‑1 (MQ=60)
    GTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGGTTGTACGACTCAGTAACTGCAGCATC                                                                                           >  SRR4302541.5584304/1‑94 (MQ=60)
      TTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAT                                                                                         <  SRR4302541.8491396/94‑1 (MQ=60)
      TTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAT                                                                                         <  SRR4302541.1906564/94‑1 (MQ=60)
      TTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAT                                                                                         >  SRR4302541.3048693/1‑94 (MQ=60)
      TTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAT                                                                                         <  SRR4302541.2184364/94‑1 (MQ=60)
       TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAGCTGCAGAATCATT                                                                                        >  SRR4302541.8118732/1‑94 (MQ=60)
        TATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTA                                                                                       <  SRR4302541.8661273/94‑1 (MQ=60)
        TATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTA                                                                                       >  SRR4302541.6588739/1‑94 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      >  SRR4302541.8617600/1‑94 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      <  SRR4302541.1291031/94‑1 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      <  SRR4302541.7297752/94‑1 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      >  SRR4302541.5043436/1‑94 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      <  SRR4302541.4168221/94‑1 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG                                                                                      >  SRR4302541.7055033/1‑94 (MQ=60)
         ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAC                                                                                      >  SRR4302541.2128537/1‑94 (MQ=60)
           CATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCA                                                                                    >  SRR4302541.889671/1‑94 (MQ=60)
             TTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATT                                                                                  >  SRR4302541.8085104/1‑94 (MQ=60)
             TTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGCTTGTACAACTCAGTAACTGCAGCATCATTAGCATT                                                                                  >  SRR4302541.2362549/1‑94 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                >  SRR4302541.668108/1‑94 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                <  SRR4302541.8836373/94‑1 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                <  SRR4302541.4688658/94‑1 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                <  SRR4302541.1741152/94‑1 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                >  SRR4302541.5792252/1‑94 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                <  SRR4302541.1276253/94‑1 (MQ=60)
               GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT                                                                                <  SRR4302541.1276252/94‑1 (MQ=60)
                TTTCGAATTTATTATCAGATACATTATATTGCGTTATTTTCCAGTTCCAGATTGGTTTGTACGACTCAGTATCTGCAGCATCATTAGCATTATC                                                                               >  SRR4302541.7913388/1‑94 (MQ=60)
                TTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATC                                                                               <  SRR4302541.728052/94‑1 (MQ=60)
                TTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATC                                                                               <  SRR4302541.3464055/94‑1 (MQ=60)
                TTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATC                                                                               >  SRR4302541.7741584/1‑94 (MQ=60)
                 TTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCA                                                                              >  SRR4302541.8493141/1‑94 (MQ=60)
                   CGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATT                                                                            <  SRR4302541.1987792/94‑1 (MQ=60)
                   CGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATT                                                                            >  SRR4302541.7998555/1‑94 (MQ=60)
                   CGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATT                                                                            >  SRR4302541.380292/1‑94 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           >  SRR4302541.3431810/1‑94 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           >  SRR4302541.2325444/1‑94 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           >  SRR4302541.2426385/1‑94 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           >  SRR4302541.1468719/1‑94 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           <  SRR4302541.5069650/94‑1 (MQ=60)
                    GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT                                                                           <  SRR4302541.5069651/94‑1 (MQ=60)
                     AATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTA                                                                          <  SRR4302541.8166890/94‑1 (MQ=60)
                     AATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTA                                                                          <  SRR4302541.5872093/94‑1 (MQ=60)
                     AATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGCGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTA                                                                          <  SRR4302541.3557071/94‑1 (MQ=60)
                      ATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAC                                                                         >  SRR4302541.4972752/1‑94 (MQ=60)
                      ATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAC                                                                         >  SRR4302541.4805364/1‑94 (MQ=60)
                      ATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAC                                                                         <  SRR4302541.6057636/94‑1 (MQ=60)
                       TTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACT                                                                        <  SRR4302541.5562195/94‑1 (MQ=60)
                       TTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACT                                                                        <  SRR4302541.5898980/94‑1 (MQ=60)
                       TTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACT                                                                        <  SRR4302541.597550/94‑1 (MQ=60)
                       TTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACT                                                                        >  SRR4302541.7102343/1‑94 (MQ=60)
                        TTAATATCAGATACATTATATTGCGATTTTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTG                                                                       <  SRR4302541.4509079/94‑1 (MQ=60)
                        TTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCGGCATCATTAGCATTATCATTTACTG                                                                       <  SRR4302541.4509078/94‑1 (MQ=60)
                        TTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTG                                                                       >  SRR4302541.3363705/1‑94 (MQ=60)
                        TTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTG                                                                       <  SRR4302541.6899193/94‑1 (MQ=60)
                         TAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGT                                                                      <  SRR4302541.8014127/94‑1 (MQ=60)
                          AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC                                                                     >  SRR4302541.3699533/1‑94 (MQ=60)
                          AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC                                                                     <  SRR4302541.3692806/94‑1 (MQ=60)
                          AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC                                                                     >  SRR4302541.28667/1‑94 (MQ=60)
                          AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC                                                                     <  SRR4302541.6846777/94‑1 (MQ=60)
                           ATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCGTCATTAGCATTATCATTTACTGTCA                                                                    >  SRR4302541.5121933/1‑94 (MQ=60)
                           ATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCA                                                                    >  SRR4302541.5121932/1‑94 (MQ=60)
                           ATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCA                                                                    >  SRR4302541.5561189/1‑94 (MQ=60)
                           ATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCA                                                                    >  SRR4302541.5561190/1‑94 (MQ=60)
                            TATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAT                                                                   >  SRR4302541.4839742/1‑94 (MQ=60)
                            TATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAT                                                                   >  SRR4302541.2358798/1‑94 (MQ=60)
                             ATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATA                                                                  <  SRR4302541.4704531/94‑1 (MQ=60)
                             ATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATA                                                                  >  SRR4302541.8881251/1‑94 (MQ=60)
                             ATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATA                                                                  >  SRR4302541.4045495/1‑94 (MQ=60)
                              TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT                                                                 <  SRR4302541.3136976/94‑1 (MQ=60)
                              TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT                                                                 <  SRR4302541.6705759/94‑1 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                >  SRR4302541.6633692/1‑94 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                <  SRR4302541.53340/94‑1 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                <  SRR4302541.2332969/94‑1 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                >  SRR4302541.7576555/1‑94 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                >  SRR4302541.152501/1‑94 (MQ=60)
                               CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT                                                                <  SRR4302541.3651901/94‑1 (MQ=60)
                                AGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA                                                               <  SRR4302541.1110905/94‑1 (MQ=60)
                                AGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA                                                               <  SRR4302541.8381923/94‑1 (MQ=60)
                                AGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA                                                               >  SRR4302541.8402788/1‑94 (MQ=60)
                                AGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA                                                               >  SRR4302541.8915051/1‑94 (MQ=60)
                                 GATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTAT                                                              <  SRR4302541.7777823/94‑1 (MQ=60)
                                 GATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTAT                                                              <  SRR4302541.1430639/94‑1 (MQ=60)
                                  ATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT                                                             <  SRR4302541.8356389/94‑1 (MQ=60)
                                  ATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT                                                             <  SRR4302541.5942407/94‑1 (MQ=60)
                                  ATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT                                                             >  SRR4302541.3210898/1‑94 (MQ=60)
                                  ATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT                                                             <  SRR4302541.8189666/94‑1 (MQ=60)
                                  ATACATTATATTGCGATAGTTTCCAGTTCCAGATGGCTTTGTACCCCCCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT                                                             <  SRR4302541.5942406/94‑1 (MQ=60)
                                    ACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAA                                                           >  SRR4302541.5941557/1‑94 (MQ=60)
                                    ACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAA                                                           <  SRR4302541.181051/94‑1 (MQ=60)
                                     CATTATATTGCTATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAG                                                          <  SRR4302541.5393345/94‑1 (MQ=60)
                                     CATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAG                                                          >  SRR4302541.2207619/1‑94 (MQ=60)
                                     CATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAG                                                          >  SRR4302541.6718861/1‑94 (MQ=60)
                                     CATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAG                                                          >  SRR4302541.3395245/1‑94 (MQ=60)
                                      ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAcga                                                         >  SRR4302541.3122235/1‑91 (MQ=60)
                                      ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGT                                                         >  SRR4302541.2663032/1‑94 (MQ=60)
                                      ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGT                                                         <  SRR4302541.1748476/94‑1 (MQ=60)
                                      ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGT                                                         <  SRR4302541.5977170/94‑1 (MQ=60)
                                       TTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTA                                                        >  SRR4302541.1963157/1‑94 (MQ=60)
                                       TTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTA                                                        <  SRR4302541.1367104/94‑1 (MQ=60)
                                       TTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTA                                                        <  SRR4302541.900190/94‑1 (MQ=60)
                                        TATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAA                                                       >  SRR4302541.4656808/1‑94 (MQ=60)
                                         ATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAA                                                      >  SRR4302541.3583120/1‑94 (MQ=60)
                                         ATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAA                                                      <  SRR4302541.7989455/94‑1 (MQ=60)
                                          TATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAT                                                     <  SRR4302541.4592567/94‑1 (MQ=60)
                                          TATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAT                                                     <  SRR4302541.4560884/94‑1 (MQ=60)
                                          TATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAT                                                     <  SRR4302541.7269548/94‑1 (MQ=60)
                                          TATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAT                                                     >  SRR4302541.1796189/1‑94 (MQ=60)
                                          TATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAA                                                     >  SRR4302541.2866247/1‑94 (MQ=60)
                                          TATTGCGATATTTTCCAGTCCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAAT                                                     <  SRR4302541.8664621/94‑1 (MQ=60)
                                           ATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATA                                                    <  SRR4302541.1652277/94‑1 (MQ=60)
                                            TTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAA                                                   <  SRR4302541.7252803/94‑1 (MQ=60)
                                            TTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAA                                                   <  SRR4302541.6514714/94‑1 (MQ=60)
                                            TTGCGATATTTTCCAGTTCCAGATCGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAA                                                   >  SRR4302541.7207472/1‑94 (MQ=60)
                                              GCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAAC                                                 <  SRR4302541.729611/94‑1 (MQ=60)
                                                GATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAA                                               >  SRR4302541.5021545/1‑94 (MQ=60)
                                                GATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAA                                               >  SRR4302541.6157215/1‑94 (MQ=60)
                                                GATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAA                                               >  SRR4302541.7928716/1‑94 (MQ=60)
                                                 ATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAAT                                              >  SRR4302541.6964762/1‑94 (MQ=60)
                                                  TATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATA                                             <  SRR4302541.7257738/94‑1 (MQ=60)
                                                   ATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATAC                                            >  SRR4302541.4659437/1‑94 (MQ=60)
                                                    TTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACT                                           <  SRR4302541.3894257/94‑1 (MQ=60)
                                                    TTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACT                                           <  SRR4302541.7238168/94‑1 (MQ=60)
                                                     TTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAGCAATACTG                                          >  SRR4302541.2946094/1‑94 (MQ=60)
                                                     TTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTG                                          <  SRR4302541.397099/94‑1 (MQ=60)
                                                     TTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTG                                          <  SRR4302541.790385/94‑1 (MQ=60)
                                                     TTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTG                                          >  SRR4302541.1623345/1‑94 (MQ=60)
                                                      TTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGC                                         >  SRR4302541.7718692/1‑94 (MQ=60)
                                                      TTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGC                                         <  SRR4302541.634421/94‑1 (MQ=60)
                                                      TTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGA                                         >  SRR4302541.1189020/1‑94 (MQ=60)
                                                       TCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCA                                        >  SRR4302541.3744230/1‑94 (MQ=60)
                                                       TCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCA                                        <  SRR4302541.3024538/94‑1 (MQ=60)
                                                        CCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAC                                       >  SRR4302541.2758555/1‑94 (MQ=60)
                                                        CCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAC                                       <  SRR4302541.3701452/94‑1 (MQ=60)
                                                         CAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACC                                      <  SRR4302541.3261804/94‑1 (MQ=60)
                                                         CAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACC                                      <  SRR4302541.5871340/94‑1 (MQ=60)
                                                         CAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACC                                      <  SRR4302541.5871341/94‑1 (MQ=60)
                                                         CAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACC                                      >  SRR4302541.4857385/1‑94 (MQ=60)
                                                          AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA                                     >  SRR4302541.1103686/1‑94 (MQ=60)
                                                          AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA                                     >  SRR4302541.5600714/1‑94 (MQ=60)
                                                          AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA                                     >  SRR4302541.2241810/1‑94 (MQ=60)
                                                          AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA                                     >  SRR4302541.781103/1‑94 (MQ=60)
                                                           GTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAA                                    >  SRR4302541.2546855/1‑94 (MQ=60)
                                                           GTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAA                                    <  SRR4302541.2959676/94‑1 (MQ=60)
                                                            TTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGAACAAAT                                   >  SRR4302541.4378373/1‑94 (MQ=60)
                                                             TCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATT                                  <  SRR4302541.5729313/94‑1 (MQ=60)
                                                             TCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATT                                  <  SRR4302541.5310554/94‑1 (MQ=60)
                                                             TCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATT                                  <  SRR4302541.6369490/94‑1 (MQ=60)
                                                              CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTACGTAAATACACAATACTGCACCAATTA                                 >  SRR4302541.6000653/1‑94 (MQ=60)
                                                              CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTA                                 <  SRR4302541.5465461/94‑1 (MQ=60)
                                                              CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTA                                 <  SRR4302541.5465460/94‑1 (MQ=60)
                                                              CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTA                                 >  SRR4302541.4620635/1‑94 (MQ=60)
                                                               CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA                                >  SRR4302541.1308731/1‑94 (MQ=60)
                                                               CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA                                <  SRR4302541.18171/94‑1 (MQ=60)
                                                               CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA                                >  SRR4302541.6287079/1‑94 (MQ=60)
                                                               CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA                                <  SRR4302541.7783959/94‑1 (MQ=60)
                                                               CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA                                >  SRR4302541.5884860/1‑94 (MQ=60)
                                                                AGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAAT                               <  SRR4302541.6804083/94‑1 (MQ=60)
                                                                AGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAAT                               >  SRR4302541.764804/1‑94 (MQ=60)
                                                                 GATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATA                              >  SRR4302541.8255251/1‑94 (MQ=60)
                                                                 GATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATA                              <  SRR4302541.6710915/94‑1 (MQ=60)
                                                                   TGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATC                            >  SRR4302541.7589019/1‑94 (MQ=60)
                                                                   TGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATC                            <  SRR4302541.3768677/94‑1 (MQ=60)
                                                                    GGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCG                           >  SRR4302541.7073494/1‑94 (MQ=60)
                                                                    GGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCG                           >  SRR4302541.6108249/1‑94 (MQ=60)
                                                                    GGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCG                           <  SRR4302541.7989575/94‑1 (MQ=60)
                                                                     GGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGG                          >  SRR4302541.7731564/1‑94 (MQ=60)
                                                                     GGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGG                          <  SRR4302541.5715791/94‑1 (MQ=60)
                                                                      GTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGT                         <  SRR4302541.2423126/94‑1 (MQ=60)
                                                                       TTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTA                        >  SRR4302541.1161822/1‑94 (MQ=60)
                                                                         TGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATT                      <  SRR4302541.8087341/94‑1 (MQ=60)
                                                                           TACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTAT                    <  SRR4302541.2662443/94‑1 (MQ=60)
                                                                           TACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTAT                    <  SRR4302541.6132944/94‑1 (MQ=60)
                                                                            ACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATC                   <  SRR4302541.1765188/94‑1 (MQ=60)
                                                                              GACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAA                 >  SRR4302541.2476725/1‑94 (MQ=60)
                                                                               GCTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAG                <  SRR4302541.1919844/94‑1 (MQ=60)
                                                                               ACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAG                >  SRR4302541.3612635/1‑94 (MQ=60)
                                                                               ACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAG                >  SRR4302541.4552738/1‑94 (MQ=60)
                                                                               ACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAG                >  SRR4302541.1421231/1‑94 (MQ=60)
                                                                                CTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTATGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGA               >  SRR4302541.7638804/1‑94 (MQ=60)
                                                                                CTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGA               >  SRR4302541.5589059/1‑94 (MQ=60)
                                                                                 TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG              <  SRR4302541.7977131/94‑1 (MQ=60)
                                                                                 TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG              <  SRR4302541.8102796/94‑1 (MQ=60)
                                                                                 TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG              >  SRR4302541.5465491/1‑94 (MQ=60)
                                                                                  CAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGA             <  SRR4302541.3594928/94‑1 (MQ=60)
                                                                                   AGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAG            >  SRR4302541.5640030/1‑94 (MQ=60)
                                                                                   AGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAG            <  SRR4302541.3856520/94‑1 (MQ=60)
                                                                                    GTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGC           <  SRR4302541.5093645/94‑1 (MQ=60)
                                                                                    GTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGC           <  SRR4302541.4131800/94‑1 (MQ=60)
                                                                                     TAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCA          <  SRR4302541.3621534/94‑1 (MQ=60)
                                                                                      AACTGCAGCATCATTAGCATTATCATGTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATAAATATCGGTATTATCAAGAGAGCAA         <  SRR4302541.3540323/94‑1 (MQ=60)
                                                                                       ACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAC        <  SRR4302541.4550546/94‑1 (MQ=60)
                                                                                        CTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACC       <  SRR4302541.1622925/94‑1 (MQ=60)
                                                                                         TGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG      >  SRR4302541.3669867/1‑94 (MQ=60)
                                                                                           CAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTA    <  SRR4302541.8889770/94‑1 (MQ=60)
                                                                                           CAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTA    >  SRR4302541.5606965/1‑94 (MQ=60)
                                                                                            AGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAA   <  SRR4302541.7982015/94‑1 (MQ=60)
                                                                                             GCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT  >  SRR4302541.1273276/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT  >  NC_000913/3629688‑3629874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑