Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,629,781 |
A→G |
V147A (GTT→GCT) |
yhiJ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,629,781 | 0 | A | G | 100.0%
| 766.9
/ NA
| 215 | V147A (GTT→GCT) | yhiJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/110); total (105/110) |
Only 100 of 217 total aligned reads displayed.
TTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG > NC_000913/3629693‑3629870
|
ttttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatc > 1:685213/1‑93 (MQ=255)
ttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatcat < 2:2250341/93‑1 (MQ=255)
ttATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGcatcat > 2:4941684/1‑93 (MQ=255)
tATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAtt > 1:3143113/1‑93 (MQ=255)
tATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAtt > 1:6290570/1‑93 (MQ=255)
tATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAtt > 1:2848862/1‑93 (MQ=255)
aTCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTa < 1:3785765/93‑1 (MQ=255)
tCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAg < 1:1667442/93‑1 (MQ=255)
cATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGc > 1:4742862/1‑93 (MQ=255)
cATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGc > 2:5422194/1‑93 (MQ=255)
aTTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGTTGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCa > 2:6079037/1‑93 (MQ=255)
aTTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCa < 1:5284405/93‑1 (MQ=255)
ttGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAt > 1:4221870/1‑93 (MQ=255)
ttGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAt < 2:6188474/93‑1 (MQ=255)
ttGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAt > 1:6409577/1‑93 (MQ=255)
tGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAtt < 2:5928763/93‑1 (MQ=255)
tGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAtt > 2:4271331/1‑93 (MQ=255)
gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa > 1:4882899/1‑93 (MQ=255)
gTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTa < 2:896567/93‑1 (MQ=255)
tttCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAt > 1:3260007/1‑93 (MQ=255)
tCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCa < 2:1060653/93‑1 (MQ=255)
cGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAt < 2:4773690/93‑1 (MQ=255)
aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt < 1:6084784/93‑1 (MQ=255)
aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt > 2:2471643/1‑93 (MQ=255)
aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt < 2:734986/93‑1 (MQ=255)
aaTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCAttt > 2:285039/1‑93 (MQ=255)
aTTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTa > 1:1207139/1‑93 (MQ=255)
tttAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAc < 2:3330849/93‑1 (MQ=255)
tttAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAc < 2:5683965/93‑1 (MQ=255)
aaTATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGt < 2:5636720/93‑1 (MQ=255)
atCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCat > 1:2971371/1‑93 (MQ=255)
atCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCat < 2:5192073/93‑1 (MQ=255)
tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata < 1:970569/93‑1 (MQ=255)
tCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCata > 1:6323/1‑93 (MQ=255)
aGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatt < 1:5653566/93‑1 (MQ=255)
gATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAtatta > 1:2321148/1‑93 (MQ=255)
cATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTaa > 1:1277797/1‑93 (MQ=255)
cATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTaa > 2:4862934/1‑93 (MQ=255)
cATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTaa > 2:6046674/1‑93 (MQ=255)
aTTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAg < 1:4280765/93‑1 (MQ=255)
ttATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGt < 2:2583416/93‑1 (MQ=255)
ttATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGt > 1:5210664/1‑93 (MQ=255)
tataTTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGta < 1:507702/93‑1 (MQ=255)
atatTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaa < 1:3102878/93‑1 (MQ=255)
atatTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaa > 1:5166506/1‑93 (MQ=255)
tatTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGtaaa > 1:2806220/1‑93 (MQ=255)
gATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACa < 1:3772467/93‑1 (MQ=255)
gATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACa > 1:4584983/1‑93 (MQ=255)
atatTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACaa < 2:5862095/93‑1 (MQ=255)
tatTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAAt > 2:1732306/1‑93 (MQ=255)
tatTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAAt > 2:1273765/1‑93 (MQ=255)
atTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATa < 2:2759108/93‑1 (MQ=255)
ttttCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATAc < 1:2295376/93‑1 (MQ=255)
ttttCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATAc < 1:328422/93‑1 (MQ=255)
tttCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACt > 2:6247980/1‑93 (MQ=255)
tttCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACt < 1:4339023/93‑1 (MQ=255)
tccagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGc > 1:5800290/1‑93 (MQ=255)
cagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAc > 2:2703470/1‑93 (MQ=255)
cagttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAc < 2:5156500/93‑1 (MQ=255)
agttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAcc > 2:3486561/1‑93 (MQ=255)
agttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAcc < 1:2432812/93‑1 (MQ=255)
agttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAcc > 2:5352692/1‑93 (MQ=255)
gttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCa > 1:3391657/1‑93 (MQ=255)
ttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCaa > 1:917396/1‑93 (MQ=255)
ttccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCaa > 1:3965988/1‑93 (MQ=255)
tccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAt > 1:5545596/1‑93 (MQ=255)
ccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAtt > 2:3804650/1‑93 (MQ=255)
ccagATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAtt < 1:6050001/93‑1 (MQ=255)
agATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTaa > 2:4703994/1‑93 (MQ=255)
gATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAat < 1:497398/93‑1 (MQ=255)
aTGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAata < 2:3357003/93‑1 (MQ=255)
tGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAatat < 1:1078497/93‑1 (MQ=255)
gggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATc < 1:2064343/93‑1 (MQ=255)
gggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATc > 2:1803220/1‑93 (MQ=255)
gggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATc < 2:6143686/93‑1 (MQ=255)
gggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATc > 1:4577647/1‑93 (MQ=255)
ggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCg < 2:3148918/93‑1 (MQ=255)
ggTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCg > 2:3987584/1‑93 (MQ=255)
tttGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGt < 1:2167204/93‑1 (MQ=255)
tGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtat < 1:3035902/93‑1 (MQ=255)
tACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtatta < 1:1449793/93‑1 (MQ=255)
aCGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtattat < 2:4580424/93‑1 (MQ=255)
aCGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGtattat < 1:4802388/93‑1 (MQ=255)
cGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATc < 1:6383/93‑1 (MQ=255)
gACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCa > 1:263885/1‑93 (MQ=255)
gACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCa > 1:4466807/1‑93 (MQ=255)
gACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCa < 1:5453839/93‑1 (MQ=255)
cTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAag < 2:248584/93‑1 (MQ=255)
tCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAaga < 1:5692559/93‑1 (MQ=255)
cAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAagag > 1:5881321/1‑93 (MQ=255)
aGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAagaga > 2:5479111/1‑93 (MQ=255)
aGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAagaga < 2:1613077/93‑1 (MQ=255)
gTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAagagag > 1:3185158/1‑93 (MQ=255)
tAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGc < 2:1958094/93‑1 (MQ=255)
tAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGc < 2:2129356/93‑1 (MQ=255)
aaCTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCa < 2:1449454/93‑1 (MQ=255)
cTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAc > 1:1065585/1‑93 (MQ=255)
tGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAcc < 1:3506965/93‑1 (MQ=255)
tGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAcc < 2:4044530/93‑1 (MQ=255)
gcagcaTCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCg < 2:1222877/93‑1 (MQ=255)
|
TTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG > NC_000913/3629693‑3629870
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT > NC_000913/3629688‑3629874
|
TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAG > SRR4302534.4164980/1‑94 (MQ=60)
GGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCA < SRR4302534.4855611/94‑1 (MQ=60)
GTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATC > SRR4302534.2882684/1‑94 (MQ=60)
GTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATC > SRR4302534.701949/1‑94 (MQ=60)
TTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCA < SRR4302534.3242212/94‑1 (MQ=60)
TTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCAT < SRR4302534.4669831/94‑1 (MQ=60)
TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT > SRR4302534.87763/1‑94 (MQ=60)
TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT > SRR4302534.3225778/1‑94 (MQ=60)
TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT > SRR4302534.6460758/1‑94 (MQ=60)
TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT < SRR4302534.2755213/94‑1 (MQ=60)
TTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT > SRR4302534.2923701/1‑94 (MQ=60)
TTATCATTGATTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATT > SRR4302534.6473635/1‑94 (MQ=60)
TATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTA > SRR4302534.6021255/1‑94 (MQ=60)
ATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAG < SRR4302534.3887408/94‑1 (MQ=60)
TCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGC < SRR4302534.1710835/94‑1 (MQ=60)
TCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGC > SRR4302534.4871612/1‑94 (MQ=60)
TCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGC < SRR4302534.2470489/94‑1 (MQ=60)
ATTGTTTCGAATTTAATATCAGATAGATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAT < SRR4302534.6561418/94‑1 (MQ=60)
ATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAT > SRR4302534.6582545/1‑94 (MQ=60)
ATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAT > SRR4302534.3067229/1‑94 (MQ=60)
ATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAT > SRR4302534.4335680/1‑94 (MQ=60)
ATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCAT < SRR4302534.5427064/94‑1 (MQ=60)
TGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTA > SRR4302534.1425833/1‑94 (MQ=60)
TGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTA > SRR4302534.5015324/1‑94 (MQ=60)
GTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTAT > SRR4302534.3346813/1‑94 (MQ=60)
GTTTCGAATTTAATATAAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGATTGTACGACTCAGTAACTGCAGCACCATTAGCATTAC > SRR4302534.5022676/1‑94 (MQ=60)
TTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCA < SRR4302534.5315932/94‑1 (MQ=60)
TTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCA < SRR4302534.1618762/94‑1 (MQ=60)
CGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATT < SRR4302534.3882929/94‑1 (MQ=60)
GAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTT > SRR4302534.5930007/1‑94 (MQ=60)
AATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTA < SRR4302534.6250239/94‑1 (MQ=60)
AATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTA > SRR4302534.1238902/1‑94 (MQ=60)
ATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAC < SRR4302534.2836055/94‑1 (MQ=60)
ATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTAC < SRR4302534.2696316/94‑1 (MQ=60)
TTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACT < SRR4302534.4706297/94‑1 (MQ=60)
TTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTG < SRR4302534.3943236/94‑1 (MQ=60)
TAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGT > SRR4302534.3155194/1‑94 (MQ=60)
AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC < SRR4302534.3353521/94‑1 (MQ=60)
AATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTC < SRR4302534.5184309/94‑1 (MQ=60)
ATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCA < SRR4302534.2148390/94‑1 (MQ=60)
TATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAT > SRR4302534.909069/1‑94 (MQ=60)
TATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCAT > SRR4302534.3049166/1‑94 (MQ=60)
ATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATA > SRR4302534.6495/1‑94 (MQ=60)
ATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATA < SRR4302534.5399605/94‑1 (MQ=60)
TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT < SRR4302534.973909/94‑1 (MQ=60)
TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT > SRR4302534.2114397/1‑94 (MQ=60)
TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT < SRR4302534.995298/94‑1 (MQ=60)
TCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATAT < SRR4302534.5465744/94‑1 (MQ=60)
CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT < SRR4302534.6321114/94‑1 (MQ=60)
CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT < SRR4302534.3676719/94‑1 (MQ=60)
CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT < SRR4302534.2344103/94‑1 (MQ=60)
CAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATT > SRR4302534.6259258/1‑94 (MQ=60)
TGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA > SRR4302534.2382749/1‑94 (MQ=60)
AGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTA < SRR4302534.5806592/94‑1 (MQ=60)
GATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTAT > SRR4302534.3192988/1‑94 (MQ=60)
ATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATT > SRR4302534.5150466/1‑94 (MQ=60)
ACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAA > SRR4302534.1311431/1‑94 (MQ=60)
CATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAGCTGCAGCATCATTAGCATTATCATTTACTGTCATATTAGTAAG < SRR4302534.4626881/94‑1 (MQ=60)
CATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAG < SRR4302534.6215134/94‑1 (MQ=60)
ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGT > SRR4302534.5351295/1‑94 (MQ=60)
ATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGT < SRR4302534.4396635/94‑1 (MQ=60)
TTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTA < SRR4302534.4537369/94‑1 (MQ=60)
TATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAA > SRR4302534.5305767/1‑94 (MQ=60)
TATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAA < SRR4302534.520338/94‑1 (MQ=60)
ATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAA > SRR4302534.4722663/1‑94 (MQ=60)
ATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAA < SRR4302534.3184504/94‑1 (MQ=60)
ATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAA > SRR4302534.2880023/1‑94 (MQ=60)
CGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACA > SRR4302534.4709391/1‑94 (MQ=60)
CGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACA < SRR4302534.1097681/94‑1 (MQ=60)
CGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACA > SRR4302534.3425977/1‑94 (MQ=60)
GATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAA < SRR4302534.3873760/94‑1 (MQ=60)
GATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAA > SRR4302534.3281222/1‑94 (MQ=60)
ATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAAT > SRR4302534.3886364/1‑94 (MQ=60)
TATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATA > SRR4302534.4450870/1‑94 (MQ=60)
TTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACT < SRR4302534.2356300/94‑1 (MQ=60)
TTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACT < SRR4302534.336861/94‑1 (MQ=60)
TTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTG < SRR4302534.4456282/94‑1 (MQ=60)
TTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGC > SRR4302534.4392396/1‑94 (MQ=60)
TTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGC > SRR4302534.5957692/1‑94 (MQ=60)
TCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCA < SRR4302534.5832928/94‑1 (MQ=60)
CCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAC < SRR4302534.3240528/94‑1 (MQ=60)
CCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAC > SRR4302534.6638332/1‑94 (MQ=60)
CCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCAC > SRR4302534.2376109/1‑94 (MQ=60)
CAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACC > SRR4302534.6501254/1‑94 (MQ=60)
AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA < SRR4302534.2497488/94‑1 (MQ=60)
AGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCA > SRR4302534.3482633/1‑94 (MQ=60)
GTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAA > SRR4302534.940737/1‑94 (MQ=60)
GTTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAA > SRR4302534.4072152/1‑94 (MQ=60)
TTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAT > SRR4302534.6166185/1‑94 (MQ=60)
TTCCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAAT > SRR4302534.5695290/1‑94 (MQ=60)
CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTA > SRR4302534.5757215/1‑94 (MQ=60)
CCAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTA < SRR4302534.6214494/94‑1 (MQ=60)
CAGATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAA > SRR4302534.1267853/1‑94 (MQ=60)
GATGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATA < SRR4302534.509803/94‑1 (MQ=60)
AGGGGTTTGTGCGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAGCAATACTGCACCAATTAAGAT < SRR4302534.3030283/94‑1 (MQ=60)
TGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATC > SRR4302534.4701802/1‑94 (MQ=60)
TGGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATC < SRR4302534.1106519/94‑1 (MQ=60)
GGGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCG < SRR4302534.2118326/94‑1 (MQ=60)
GGTTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGG > SRR4302534.5715456/1‑94 (MQ=60)
TTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTA < SRR4302534.1920988/94‑1 (MQ=60)
TTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTA < SRR4302534.5276435/94‑1 (MQ=60)
TTTGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTA < SRR4302534.2224442/94‑1 (MQ=60)
TGTACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATT < SRR4302534.3115517/94‑1 (MQ=60)
TACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTAT < SRR4302534.1487946/94‑1 (MQ=60)
ACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATC < SRR4302534.4932790/94‑1 (MQ=60)
ACGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATC < SRR4302534.4932791/94‑1 (MQ=60)
CGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCA < SRR4302534.6556/94‑1 (MQ=60)
CGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCA > SRR4302534.4587595/1‑94 (MQ=60)
CGACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCA > SRR4302534.270726/1‑94 (MQ=60)
GACTCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAA < SRR4302534.5600804/94‑1 (MQ=60)
TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG > SRR4302534.6041012/1‑94 (MQ=60)
TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG < SRR4302534.5846740/94‑1 (MQ=60)
TCAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAG < SRR4302534.4269883/94‑1 (MQ=60)
CAGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGA < SRR4302534.4922549/94‑1 (MQ=60)
AGTAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAG > SRR4302534.3269393/1‑94 (MQ=60)
TAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCA < SRR4302534.5667416/94‑1 (MQ=60)
TAACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCA > SRR4302534.1223170/1‑94 (MQ=60)
AACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAA > SRR4302534.3492670/1‑94 (MQ=60)
ACTGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAAC > SRR4302534.1093209/1‑94 (MQ=60)
TGCAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCG < SRR4302534.3601306/94‑1 (MQ=60)
CAGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTA < SRR4302534.4000768/94‑1 (MQ=60)
AGCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAA > SRR4302534.1817176/1‑94 (MQ=60)
GCATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT < SRR4302534.2532513/94‑1 (MQ=60)
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TGGGGTTTTATCATTGTTTCGAATTTAATATCAGATACATTATATTGCGATATTTTCCAGTTCCAGATGGGTTTGTACGACTCAGTAACTGCAACATCATTAGCATTATCATTTACTGTCATATTATTAAGTAAATAAACAATACTGCACCAATTAATATCGGTATTATCAAGAGAGCAACCGTAAT > NC_000913/3629688‑3629874
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
