Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,677,270 T→C T147T (ACT→ACC)  kdgK → ketodeoxygluconokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,677,2700TC99.5% 1378.9 / ‑3.6 406T147T (ACT→ACC) kdgKketodeoxygluconokinase
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (188/215);  total (191/215)
Fisher's exact test for biased strand distribution p-value = 2.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.19e-01

Only 100 of 420 total aligned reads displayed.

GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG  >  NC_000913/3677180‑3677359
                                                                                          |                                                                                         
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc                                                                                         <  1:3963600/93‑1 (MQ=255)
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc                                                                                         >  1:822356/1‑93 (MQ=255)
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc                                                                                         >  2:1970999/1‑93 (MQ=255)
 gCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTcc                                                                                        <  2:3882691/93‑1 (MQ=255)
  cATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTccc                                                                                       <  1:3733498/93‑1 (MQ=255)
   aTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCt                                                                                      >  1:7673880/1‑93 (MQ=255)
     tAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGa                                                                                    <  2:7720960/93‑1 (MQ=255)
        ccGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAccc                                                                                 >  1:1695805/1‑93 (MQ=255)
        ccGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAccc                                                                                 <  2:6732528/93‑1 (MQ=255)
        ccGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAccc                                                                                 >  2:158758/1‑93 (MQ=255)
        ccGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGACACCTCCCTGAccc                                                                                 >  1:6500008/1‑93 (MQ=255)
          gTTCATTGCGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCaa                                                                               <  2:2773341/93‑1 (MQ=255)
          gTTCATTACGTAACGGCGCTGGGAGCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCaa                                                                               <  1:6260360/93‑1 (MQ=255)
          gTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCaa                                                                               <  2:5987340/93‑1 (MQ=255)
           ttCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAc                                                                              <  1:5318522/93‑1 (MQ=255)
           ttCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAc                                                                              >  1:1222274/1‑93 (MQ=255)
             taTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg                                                                            <  1:1076251/92‑1 (MQ=255)
             cATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg                                                                            <  2:880216/93‑1 (MQ=255)
             cATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg                                                                            >  2:5780531/1‑93 (MQ=255)
             cATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg                                                                            >  2:8434887/1‑93 (MQ=255)
              aTTACGTAACGGCGCTGGGAACGGATAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa                                                                           <  1:6046469/93‑1 (MQ=255)
              aTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGAACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa                                                                           <  1:4881015/93‑1 (MQ=255)
               ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt                                                                          >  1:3358044/1‑93 (MQ=255)
                tACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATg                                                                         <  2:8056240/93‑1 (MQ=255)
                 aCGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATgg                                                                        <  1:7011238/93‑1 (MQ=255)
                 aCGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATgg                                                                        <  1:3247232/93‑1 (MQ=255)
                 aCGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATgg                                                                        <  1:8741624/93‑1 (MQ=255)
                  cGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGa                                                                       <  1:5463745/93‑1 (MQ=255)
                  cGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGa                                                                       <  2:5173065/93‑1 (MQ=255)
                    tAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCCACGGATGGaaa                                                                     >  2:3588157/1‑93 (MQ=255)
                    tAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGaaa                                                                     >  1:6309080/1‑93 (MQ=255)
                         gcgcTGGGAACGGACAGTTGTAGCCAGCTGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGt                                                                <  2:4629522/93‑1 (MQ=255)
                          cgcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTc                                                               <  1:844116/93‑1 (MQ=255)
                           gcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCt                                                              >  2:5070305/1‑93 (MQ=255)
                            cTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTg                                                             >  1:3179147/1‑93 (MQ=255)
                             tGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGc                                                            <  1:1852197/93‑1 (MQ=255)
                             tGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGc                                                            <  1:2238676/93‑1 (MQ=255)
                              gggAACGCACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCCCCCTGACCCAACGGATGGAAAACCGTCTGcc                                                           <  2:1395587/93‑1 (MQ=255)
                               ggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCg                                                          >  2:641038/1‑93 (MQ=255)
                                gAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCgg                                                         <  2:3274697/93‑1 (MQ=255)
                                 aaCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCggg                                                        <  2:1477043/93‑1 (MQ=255)
                                   cGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGcc                                                      <  2:1732630/93‑1 (MQ=255)
                                   cGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGcc                                                      <  2:1267903/93‑1 (MQ=255)
                                    ggACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCt                                                     >  1:7620375/1‑93 (MQ=255)
                                    ggACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCt                                                     <  2:2970584/93‑1 (MQ=255)
                                       cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta                                                  <  2:4965786/93‑1 (MQ=255)
                                       cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta                                                  >  2:5847671/1‑93 (MQ=255)
                                       cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta                                                  >  2:8344828/1‑93 (MQ=255)
                                          ttttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtacta                                               <  2:5360651/93‑1 (MQ=255)
                                          ttttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtacta                                               >  2:6972128/1‑93 (MQ=255)
                                           tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac                                              >  2:2289392/1‑93 (MQ=255)
                                            ttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGCAAACCGTCTGGCGCGCCTTTACTACa                                             >  2:815763/1‑93 (MQ=255)
                                            ttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACa                                             <  2:4058650/93‑1 (MQ=255)
                                            ttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACa                                             <  2:7188866/93‑1 (MQ=255)
                                             tAGCCAGCAGATGCGGGACGCCTGTCACGGCGAGAACGTTGATACCTCCCTGCCCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAt                                            <  2:2893203/93‑1 (MQ=255)
                                              aGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAtt                                           <  2:413821/93‑1 (MQ=255)
                                               gCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCGGGGCCTTTACTACAtta                                          >  1:2397967/1‑92 (MQ=255)
                                               gCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTg                                          >  1:2832728/1‑93 (MQ=255)
                                               gCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTg                                          <  1:43223/93‑1 (MQ=255)
                                                ccAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGa                                         >  1:8631919/1‑93 (MQ=255)
                                                 cagcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaa                                        <  2:1195000/93‑1 (MQ=255)
                                                 cagcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaa                                        <  2:856138/93‑1 (MQ=255)
                                                  agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa                                       <  2:566318/93‑1 (MQ=255)
                                                  agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa                                       <  1:6820851/93‑1 (MQ=255)
                                                  agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa                                       >  1:4164744/1‑93 (MQ=255)
                                                  agcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaaa                                       >  1:1570482/1‑93 (MQ=255)
                                                   gcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAc                                      >  1:970140/1‑93 (MQ=255)
                                                     agATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCg                                    <  2:6827805/93‑1 (MQ=255)
                                                       aTGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAc                                  >  1:2616401/1‑93 (MQ=255)
                                                        tGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACa                                 <  2:4798128/93‑1 (MQ=255)
                                                        tGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACa                                 <  1:3624052/93‑1 (MQ=255)
                                                         gCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAg                                <  2:31729/93‑1 (MQ=255)
                                                          cTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGc                               <  1:20790/93‑1 (MQ=255)
                                                           tGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCa                              >  1:5233173/1‑93 (MQ=255)
                                                           tGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCa                              <  2:616453/93‑1 (MQ=255)
                                                            ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACCGCAc                             <  1:7076857/93‑1 (MQ=255)
                                                             gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc                            <  2:4311429/93‑1 (MQ=255)
                                                              aCGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCg                           <  2:4373292/93‑1 (MQ=255)
                                                               cGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTCCCGGGCCTTTACTACATTGAAACCGACAGCACCgg                          <  2:3100667/93‑1 (MQ=255)
                                                                 ccTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCg                        >  2:7795042/1‑93 (MQ=255)
                                                                 ccTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCg                        >  2:1906958/1‑93 (MQ=255)
                                                                 ccTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCg                        >  2:2148844/1‑93 (MQ=255)
                                                                  cTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGa                       >  1:6207983/1‑93 (MQ=255)
                                                                    ggCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGc                     >  1:1994904/1‑93 (MQ=255)
                                                                    ggCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGc                     <  2:7606700/93‑1 (MQ=255)
                                                                       aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa                  <  1:7896775/93‑1 (MQ=255)
                                                                       aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa                  <  1:3612482/93‑1 (MQ=255)
                                                                       aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa                  >  2:5292074/1‑93 (MQ=255)
                                                                        cGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAc                 <  1:383791/93‑1 (MQ=255)
                                                                            gagaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTc             >  1:5686582/1‑93 (MQ=255)
                                                                             agaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTct            >  1:73395/1‑93 (MQ=255)
                                                                             agaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTct            >  1:8580056/1‑93 (MQ=255)
                                                                              gaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTcta           >  1:2299788/1‑93 (MQ=255)
                                                                              gaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGGACGCTcta           >  1:4239635/1‑93 (MQ=255)
                                                                                 cGTTGATGCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctacta        <  1:6779183/93‑1 (MQ=255)
                                                                                  gTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCtactac       <  1:5909779/93‑1 (MQ=255)
                                                                                  gTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGCCGAGCGTACGTTCtactac       >  2:7456099/1‑93 (MQ=255)
                                                                                   ttGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTactact      <  1:8076185/93‑1 (MQ=255)
                                                                                    tGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTg     <  2:8677714/93‑1 (MQ=255)
                                                                                      aTACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGc   <  1:4627473/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG  >  NC_000913/3677180‑3677359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 232 total aligned reads displayed.
TGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  >  NC_000913/3677177‑3677363
                                                                                             |                                                                                             
TGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACC                                                                                               <  SRR4302541.6634624/94‑1 (MQ=60)
 GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCT                                                                                              >  SRR4302541.4570507/1‑94 (MQ=60)
  CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC                                                                                             >  SRR4302541.829839/1‑94 (MQ=60)
  CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC                                                                                             <  SRR4302541.4315529/94‑1 (MQ=60)
  CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC                                                                                             <  SRR4302541.7178091/94‑1 (MQ=60)
  CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC                                                                                             <  SRR4302541.478607/94‑1 (MQ=60)
  CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC                                                                                             <  SRR4302541.3411921/94‑1 (MQ=60)
   GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCC                                                                                            <  SRR4302541.4002961/94‑1 (MQ=60)
   GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCC                                                                                            >  SRR4302541.3426430/1‑94 (MQ=60)
    GCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCC                                                                                           >  SRR4302541.7121172/1‑94 (MQ=60)
     CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT                                                                                          >  SRR4302541.7755475/1‑94 (MQ=60)
     CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT                                                                                          <  SRR4302541.1251456/94‑1 (MQ=60)
     CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT                                                                                          <  SRR4302541.3771090/94‑1 (MQ=60)
        TAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAC                                                                                       >  SRR4302541.1698359/1‑94 (MQ=60)
          ACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCC                                                                                     >  SRR4302541.8404623/1‑94 (MQ=60)
          ACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGACACCTCCCTGACCC                                                                                     >  SRR4302541.6566291/1‑94 (MQ=60)
           CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCA                                                                                    <  SRR4302541.8145760/94‑1 (MQ=60)
           CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCA                                                                                    <  SRR4302541.6925151/94‑1 (MQ=60)
           CCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCAA                                                                                    >  SRR4302541.677058/1‑94 (MQ=60)
            CGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAC                                                                                   >  SRR4302541.7643018/1‑94 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAGCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC                                                                                  <  SRR4302541.6324296/94‑1 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC                                                                                  <  SRR4302541.8647122/94‑1 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC                                                                                  >  SRR4302541.3372441/1‑94 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC                                                                                  >  SRR4302541.1234241/1‑94 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAC                                                                                  >  SRR4302541.3985652/1‑94 (MQ=60)
             GTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGATGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAAC                                                                                  >  SRR4302541.6790738/1‑94 (MQ=60)
              TTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACG                                                                                 <  SRR4302541.5373268/94‑1 (MQ=60)
                TATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA                                                                               <  SRR4302541.1086280/94‑1 (MQ=60)
                CATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA                                                                               >  SRR4302541.6086138/1‑94 (MQ=60)
                CATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA                                                                               >  SRR4302541.7597897/1‑94 (MQ=60)
                CATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA                                                                               >  SRR4302541.5317031/1‑94 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGATAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              <  SRR4302541.6108313/94‑1 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              <  SRR4302541.2824718/94‑1 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              >  SRR4302541.3391554/1‑94 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              >  SRR4302541.1228932/1‑94 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              >  SRR4302541.3714089/1‑94 (MQ=60)
                 ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGAACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT                                                                              <  SRR4302541.4930830/94‑1 (MQ=60)
                  TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATG                                                                             <  SRR4302541.5044372/94‑1 (MQ=60)
                  TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATG                                                                             <  SRR4302541.1626891/94‑1 (MQ=60)
                  TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCACTGACCCAACGGATG                                                                             <  SRR4302541.184390/94‑1 (MQ=60)
                   TACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGG                                                                            <  SRR4302541.7549177/94‑1 (MQ=60)
                    tcgtagcggaGCTGGGAATGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA                                                                           <  SRR4302541.8774056/84‑1 (MQ=60)
                    ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA                                                                           <  SRR4302541.7085814/94‑1 (MQ=60)
                    ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA                                                                           >  SRR4302541.6953505/1‑94 (MQ=60)
                    ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA                                                                           <  SRR4302541.8835183/94‑1 (MQ=60)
                     CGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAA                                                                          >  SRR4302541.2233926/1‑94 (MQ=60)
                     CGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAA                                                                          >  SRR4302541.5954611/1‑94 (MQ=60)
                     CGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAA                                                                          <  SRR4302541.5519790/94‑1 (MQ=60)
                      GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCTCTGACCCAACGGATGGAAA                                                                         >  SRR4302541.1703223/1‑94 (MQ=60)
                      GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAA                                                                         >  SRR4302541.8272223/1‑94 (MQ=60)
                       TAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAA                                                                        <  SRR4302541.3290699/94‑1 (MQ=60)
                        AACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAAC                                                                       <  SRR4302541.1491630/94‑1 (MQ=60)
                          CGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCG                                                                     >  SRR4302541.6352357/1‑94 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.2963173/94‑1 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.6141249/94‑1 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.8081861/94‑1 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.851777/94‑1 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.2318714/94‑1 (MQ=60)
                             CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT                                                                  <  SRR4302541.7752482/94‑1 (MQ=60)
                              GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTG                                                                 >  SRR4302541.3211265/1‑94 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.1870095/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               >  SRR4302541.3861306/1‑94 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.8625262/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.1105165/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.4284858/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.6367678/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.2260354/94‑1 (MQ=60)
                                TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC                                                               <  SRR4302541.2075735/94‑1 (MQ=60)
                                 GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG                                                              <  SRR4302541.4693582/94‑1 (MQ=60)
                                 GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG                                                              >  SRR4302541.3089928/1‑94 (MQ=60)
                                 GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG                                                              <  SRR4302541.4217176/94‑1 (MQ=60)
                                 GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG                                                              >  SRR4302541.7651343/1‑94 (MQ=60)
                                  GGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGG                                                             >  SRR4302541.6314422/1‑94 (MQ=60)
                                  GGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGG                                                             <  SRR4302541.631622/94‑1 (MQ=60)
                                   GAGCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG                                                            <  SRR4302541.7765338/94‑1 (MQ=60)
                                   GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG                                                            >  SRR4302541.6918456/1‑94 (MQ=60)
                                   GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG                                                            >  SRR4302541.1917887/1‑94 (MQ=60)
                                   GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG                                                            <  SRR4302541.7765337/94‑1 (MQ=60)
                                    AACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGC                                                           >  SRR4302541.8583622/1‑94 (MQ=60)
                                     ACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCC                                                          <  SRR4302541.6393641/94‑1 (MQ=60)
                                      CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT                                                         >  SRR4302541.7701744/1‑94 (MQ=60)
                                      CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT                                                         >  SRR4302541.5293498/1‑94 (MQ=60)
                                      CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT                                                         <  SRR4302541.8253501/94‑1 (MQ=60)
                                       GGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT                                                        >  SRR4302541.3289440/1‑94 (MQ=60)
                                       GGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT                                                        >  SRR4302541.6266892/1‑94 (MQ=60)
                                       GGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT                                                        <  SRR4302541.2455936/94‑1 (MQ=60)
                                       GGACAGTGTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT                                                        <  SRR4302541.4166992/94‑1 (MQ=60)
                                         ACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTA                                                      <  SRR4302541.8342326/94‑1 (MQ=60)
                                         ACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTA                                                      <  SRR4302541.2830976/94‑1 (MQ=60)
                                          CAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTAC                                                     >  SRR4302541.5660590/1‑94 (MQ=60)
                                          CAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTAC                                                     >  SRR4302541.583655/1‑94 (MQ=60)
                                           AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT                                                    <  SRR4302541.5505639/94‑1 (MQ=60)
                                           AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT                                                    >  SRR4302541.3697048/1‑94 (MQ=60)
                                            GTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTA                                                   >  SRR4302541.1786439/1‑94 (MQ=60)
                                             TTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC                                                  >  SRR4302541.4663373/1‑94 (MQ=60)
                                              TTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACA                                                 >  SRR4302541.8697093/1‑94 (MQ=60)
                                                TAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATT                                               <  SRR4302541.344474/94‑1 (MQ=60)
                                                 AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCGGGGCCTTTACTACATTA                                              >  SRR4302541.2421458/1‑94 (MQ=60)
                                                 AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTG                                              >  SRR4302541.2861258/1‑94 (MQ=60)
                                                 AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTG                                              >  SRR4302541.3230653/1‑94 (MQ=60)
                                                  GCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGA                                             >  SRR4302541.8724411/1‑94 (MQ=60)
                                                  GCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGA                                             <  SRR4302541.43551/94‑1 (MQ=60)
                                                   CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAA                                            >  SRR4302541.4416097/1‑94 (MQ=60)
                                                    CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA                                           >  SRR4302541.4205986/1‑94 (MQ=60)
                                                    CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA                                           >  SRR4302541.1586200/1‑94 (MQ=60)
                                                    CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA                                           <  SRR4302541.3674831/94‑1 (MQ=60)
                                                     AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGTGCCTTTACTACATTGAAAC                                          <  SRR4302541.5320518/94‑1 (MQ=60)
                                                     AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC                                          >  SRR4302541.979252/1‑94 (MQ=60)
                                                     AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC                                          <  SRR4302541.2261459/94‑1 (MQ=60)
                                                     AGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAC                                          <  SRR4302541.6893845/94‑1 (MQ=60)
                                                       CAGATGCTGGACGCCTGGCAGGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG                                        <  SRR4302541.731887/94‑1 (MQ=60)
                                                       CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG                                        <  SRR4302541.4954778/94‑1 (MQ=60)
                                                       CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG                                        >  SRR4302541.2272134/1‑94 (MQ=60)
                                                        AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGC                                       >  SRR4302541.8683111/1‑94 (MQ=60)
                                                        AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA                                       >  SRR4302541.1982677/1‑94 (MQ=60)
                                                         GATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAC                                      <  SRR4302541.8879493/94‑1 (MQ=60)
                                                         GATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAC                                      >  SRR4302541.2642535/1‑94 (MQ=60)
                                                          ATGCTGGACGCCTGGGACGGCGAGAAGGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACA                                     <  SRR4302541.8709655/94‑1 (MQ=60)
                                                          ATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACA                                     >  SRR4302541.2664767/1‑94 (MQ=60)
                                                           TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG                                    >  SRR4302541.8329702/1‑94 (MQ=60)
                                                           TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG                                    <  SRR4302541.3998519/94‑1 (MQ=60)
                                                           TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG                                    <  SRR4302541.3660790/94‑1 (MQ=60)
                                                            GCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGC                                   <  SRR4302541.3654087/94‑1 (MQ=60)
                                                             CTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCA                                  <  SRR4302541.4199219/94‑1 (MQ=60)
                                                             CTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCA                                  <  SRR4302541.20964/94‑1 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACCGCACC                                <  SRR4302541.7152127/94‑1 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                >  SRR4302541.2381336/1‑94 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                <  SRR4302541.1881267/94‑1 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                <  SRR4302541.6440740/94‑1 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                >  SRR4302541.7848369/1‑94 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                <  SRR4302541.2610666/94‑1 (MQ=60)
                                                               GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC                                <  SRR4302541.1721141/94‑1 (MQ=60)
                                                                GACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCG                               >  SRR4302541.6356730/1‑94 (MQ=60)
                                                                GACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCG                               <  SRR4302541.3887498/94‑1 (MQ=60)
                                                                 ACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG                              <  SRR4302541.4906459/94‑1 (MQ=60)
                                                                 ACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG                              <  SRR4302541.1233472/94‑1 (MQ=60)
                                                                  CGCCTGGCACGGCGAGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC                             <  SRR4302541.8124691/94‑1 (MQ=60)
                                                                  CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC                             >  SRR4302541.5541322/1‑94 (MQ=60)
                                                                  CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC                             <  SRR4302541.5110538/94‑1 (MQ=60)
                                                                   GCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCG                            <  SRR4302541.2040122/94‑1 (MQ=60)
                                                                   GCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCG                            >  SRR4302541.6819896/1‑94 (MQ=60)
                                                                    CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA                           >  SRR4302541.6271433/1‑94 (MQ=60)
                                                                    CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA                           >  SRR4302541.2239613/1‑94 (MQ=60)
                                                                    CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA                           >  SRR4302541.2464861/1‑94 (MQ=60)
                                                                    CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA                           >  SRR4302541.4229502/1‑94 (MQ=60)
                                                                     CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG                          >  SRR4302541.923879/1‑94 (MQ=60)
                                                                     CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG                          <  SRR4302541.2391242/94‑1 (MQ=60)
                                                                      TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC                         >  SRR4302541.5563671/1‑94 (MQ=60)
                                                                      TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC                         >  SRR4302541.3279466/1‑94 (MQ=60)
                                                                      TGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC                         >  SRR4302541.2014211/1‑94 (MQ=60)
                                                                        GCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGT                       <  SRR4302541.4942117/94‑1 (MQ=60)
                                                                         CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA                      >  SRR4302541.7116249/1‑94 (MQ=60)
                                                                         CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA                      <  SRR4302541.3785930/94‑1 (MQ=60)
                                                                          ACGGCGAGAACGTTGATCCCCCCCTGACCCAACGGATGGAACACCGTCGGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC                     <  SRR4302541.3649104/94‑1 (MQ=60)
                                                                          ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC                     <  SRR4302541.3649105/94‑1 (MQ=60)
                                                                          ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC                     <  SRR4302541.7983619/94‑1 (MQ=60)
                                                                           CGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACG                    <  SRR4302541.387330/94‑1 (MQ=60)
                                                                           CGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACG                    <  SRR4302541.6148592/94‑1 (MQ=60)
                                                                           CGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACG                    >  SRR4302541.588379/1‑94 (MQ=60)
                                                                            GGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGT                   >  SRR4302541.8764022/1‑94 (MQ=60)
                                                                            GGAGAGAACGTTGATACCTCCCTGACCTAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGCCGAGCGTACGT                   >  SRR4302541.6751728/1‑94 (MQ=60)
                                                                             GCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCGGCCGGGCCTTTACTACATTGAATCCGACAGCACCGGCGAGCGTACGTT                  <  SRR4302541.4109756/94‑1 (MQ=60)
                                                                              CGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTC                 >  SRR4302541.7731212/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGCCAGCCCCTGCGAGCGTACGTTCT                >  SRR4302541.3622746/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT                >  SRR4302541.6031197/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT                >  SRR4302541.4237091/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT                >  SRR4302541.74013/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT                >  SRR4302541.4334026/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT                >  SRR4302541.6892709/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGGACGTTCT                >  SRR4302541.6042012/1‑94 (MQ=60)
                                                                               GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTGACTACACTGAAACCGACAGCACCGGCGAGaggacgctct                >  SRR4302541.8672170/1‑84 (MQ=60)
                                                                                AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA               >  SRR4302541.2322092/1‑94 (MQ=60)
                                                                                AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA               >  SRR4302541.20282/1‑94 (MQ=60)
                                                                                  AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT             <  SRR4302541.5414961/94‑1 (MQ=60)
                                                                                   ACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTA            <  SRR4302541.6438049/94‑1 (MQ=60)
                                                                                   ACGTAGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTA            <  SRR4302541.1004644/94‑1 (MQ=60)
                                                                                    CGTTGATGCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTAC           <  SRR4302541.6851681/94‑1 (MQ=60)
                                                                                    CGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTAC           >  SRR4302541.324466/1‑94 (MQ=60)
                                                                                    CGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTAC           >  SRR4302541.3653453/1‑94 (MQ=60)
                                                                                    AGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTAC           <  SRR4302541.6851682/94‑1 (MQ=60)
                                                                                     GTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACT          <  SRR4302541.5969940/94‑1 (MQ=60)
                                                                                      TTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTG         <  SRR4302541.8164807/94‑1 (MQ=60)
                                                                                        GATCCCTCCCTGACCCAACGGATGGAAAACCCTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGC       <  SRR4302541.538185/94‑1 (MQ=60)
                                                                                        GATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGC       >  SRR4302541.934021/1‑94 (MQ=60)
                                                                                         ATACCTCCCTGACCCAACGGATGGAAATCCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG      <  SRR4302541.4328610/94‑1 (MQ=60)
                                                                                         ATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG      >  SRR4302541.7340363/1‑94 (MQ=60)
                                                                                         ATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG      <  SRR4302541.4674549/94‑1 (MQ=60)
                                                                                           ACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGA    >  SRR4302541.5373767/1‑94 (MQ=60)
                                                                                           ACCTCCCTGACCCAACGGATGGAAAACCGTCGGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGGGCGTACGTTCTACTACgagcgca    >  SRR4302541.4455043/1‑87 (MQ=60)
                                                                                            CCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAA   >  SRR4302541.7477971/1‑94 (MQ=60)
                                                                                            CCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAA   <  SRR4302541.8279305/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAACCCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  <  SRR4302541.7774944/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  >  SRR4302541.8654322/1‑94 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  <  SRR4302541.362296/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  <  SRR4302541.640562/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  <  SRR4302541.3191345/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  <  SRR4302541.1452672/94‑1 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  >  SRR4302541.6315801/1‑94 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  >  SRR4302541.5699664/1‑94 (MQ=60)
                                                                                             CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGCTCTACTACTGGCGGAAC  >  SRR4302541.8654323/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC  >  NC_000913/3677177‑3677363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑