Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,677,270 |
T→C |
T147T (ACT→ACC) |
kdgK → |
ketodeoxygluconokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,677,270 | 0 | T | C | 99.6%
| 866.8
/ NA
| 249 | T147T (ACT→ACC) | kdgK | ketodeoxygluconokinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (117/131); minor base G (0/1); total (117/132) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 254 total aligned reads displayed.
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG > NC_000913/3677180‑3677359
|
ggCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTc < 1:5832003/93‑1 (MQ=255)
cATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTccc < 1:1953494/93‑1 (MQ=255)
acttAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATGCCTccc < 1:2009513/91‑1 (MQ=255)
aTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCt < 2:1579356/93‑1 (MQ=255)
aTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCt < 1:4428836/93‑1 (MQ=255)
ccGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAccc > 1:1771411/1‑93 (MQ=255)
ttCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAAc > 2:6390525/1‑93 (MQ=255)
cATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg < 1:3033361/93‑1 (MQ=255)
cATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACgg < 2:6239613/93‑1 (MQ=255)
aTTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGa < 1:4192909/93‑1 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt < 1:3175694/93‑1 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt < 2:6479371/93‑1 (MQ=255)
ttACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAt < 1:251669/93‑1 (MQ=255)
tAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGaaa > 2:1026088/1‑93 (MQ=255)
gcgcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGt > 2:1939070/1‑93 (MQ=255)
gcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCt < 1:3960760/93‑1 (MQ=255)
gcTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCt < 2:2782698/93‑1 (MQ=255)
cTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTg < 2:883597/93‑1 (MQ=255)
cTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGCTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTg > 2:150444/1‑93 (MQ=255)
tGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGc > 1:3568921/1‑93 (MQ=255)
tGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGc > 2:761333/1‑93 (MQ=255)
gggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGcc > 1:5056415/1‑93 (MQ=255)
gggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGcc > 1:6176261/1‑93 (MQ=255)
ggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCg > 2:2922678/1‑93 (MQ=255)
ggAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCg < 1:1498642/93‑1 (MQ=255)
gAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCgg > 2:4028727/1‑93 (MQ=255)
aCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGc > 2:3543304/1‑93 (MQ=255)
cGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGcc < 1:4987352/93‑1 (MQ=255)
ggACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCt > 1:881600/1‑93 (MQ=255)
ggACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCt > 1:5921312/1‑93 (MQ=255)
ggACAGGTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCt > 2:5975134/1‑93 (MQ=255)
gACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCtt > 2:1479791/1‑93 (MQ=255)
aCAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCttt > 1:2644055/1‑93 (MQ=255)
aCAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCttt < 1:1398210/93‑1 (MQ=255)
cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta > 2:4177572/1‑93 (MQ=255)
cAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTta > 2:736328/1‑93 (MQ=255)
gTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtact > 1:101791/1‑93 (MQ=255)
ttttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtacta > 2:4738623/1‑93 (MQ=255)
tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac < 1:4068260/93‑1 (MQ=255)
tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac < 2:556616/93‑1 (MQ=255)
tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac > 1:4677946/1‑93 (MQ=255)
tttAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac > 1:2272856/1‑93 (MQ=255)
tAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAt > 2:6046869/1‑93 (MQ=255)
aGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAtt < 2:5101122/93‑1 (MQ=255)
aGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAtt > 2:4774636/1‑93 (MQ=255)
aGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACAtt > 1:4483786/1‑93 (MQ=255)
gCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTg > 1:334746/1‑93 (MQ=255)
cagcagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGaa > 2:1320794/1‑93 (MQ=255)
cagATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAAcc < 1:5129979/93‑1 (MQ=255)
gATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGa > 1:571907/1‑93 (MQ=255)
gATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGa < 1:1260217/93‑1 (MQ=255)
gATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGa > 1:3119885/1‑93 (MQ=255)
aTGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAc < 1:4829056/93‑1 (MQ=255)
aTGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAc < 1:5340225/93‑1 (MQ=255)
aTGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAc < 2:1159913/93‑1 (MQ=255)
cTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGc < 2:5622586/93‑1 (MQ=255)
ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAc > 2:3105802/1‑93 (MQ=255)
ggACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAc < 2:1145475/93‑1 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc < 2:6191954/93‑1 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc > 2:5175565/1‑93 (MQ=255)
gACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAcc > 2:2153805/1‑93 (MQ=255)
aCGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCg < 2:1648750/93‑1 (MQ=255)
cGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg > 2:4959124/1‑93 (MQ=255)
cGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg < 1:1174842/93‑1 (MQ=255)
cGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg > 1:2449292/1‑93 (MQ=255)
cGCCTGGCACGGCAAGAACGTTGATACCTCCCTGACCCAACGGATGGACACCCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCgg < 1:6466323/93‑1 (MQ=255)
gCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGc < 1:5683662/93‑1 (MQ=255)
cTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGa < 1:5192734/93‑1 (MQ=255)
cTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGa > 2:393962/1‑93 (MQ=255)
cggCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGCAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAg < 2:334815/92‑1 (MQ=255)
ggCACGGCAAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGc > 1:6279532/1‑93 (MQ=255)
gCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCg > 2:3139515/1‑93 (MQ=255)
gCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCg < 2:4613388/93‑1 (MQ=255)
cACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACTGACAGCACCGGCGGGCGt > 1:3631711/1‑93 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa > 1:6367605/1‑93 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 1:459740/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 2:4593177/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 2:4454185/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa > 2:4309983/1‑93 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 2:377433/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 1:3729170/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa < 1:719290/93‑1 (MQ=255)
aCGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTa > 1:1619515/1‑93 (MQ=255)
cGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAc < 1:5419322/93‑1 (MQ=255)
ggCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACg > 2:4422922/1‑93 (MQ=255)
ggCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACg < 1:3825207/93‑1 (MQ=255)
gCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGt > 1:4543647/1‑93 (MQ=255)
gCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGt > 1:1214707/1‑93 (MQ=255)
gagaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTc < 1:4870310/93‑1 (MQ=255)
gagaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTc < 2:3631977/93‑1 (MQ=255)
gagaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTc < 1:2730990/93‑1 (MQ=255)
gagaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTc < 2:1871829/93‑1 (MQ=255)
agaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTct > 1:2151944/1‑93 (MQ=255)
gaACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTcta > 1:1864562/1‑93 (MQ=255)
aCGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctact > 2:3497180/1‑93 (MQ=255)
aCGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctact > 2:3202268/1‑93 (MQ=255)
aCGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTctact < 2:2400359/93‑1 (MQ=255)
tGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTg > 2:4232676/1‑93 (MQ=255)
aTACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGc < 1:1355152/93‑1 (MQ=255)
aTACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGc < 2:256702/93‑1 (MQ=255)
|
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG > NC_000913/3677180‑3677359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > NC_000913/3677177‑3677363
|
TGCGGCCTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACC > SRR4302534.4182552/1‑94 (MQ=60)
GCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCT > SRR4302534.4899214/1‑94 (MQ=60)
CGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTC < SRR4302534.76762/94‑1 (MQ=60)
GGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCC < SRR4302534.5990303/94‑1 (MQ=60)
GCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCC < SRR4302534.504248/94‑1 (MQ=60)
acTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATGCCTCCCT < SRR4302534.2062095/92‑1 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT > SRR4302534.4069955/1‑94 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT < SRR4302534.2004622/94‑1 (MQ=60)
CATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCT > SRR4302534.5508199/1‑94 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG < SRR4302534.4548426/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG < SRR4302534.4594991/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG < SRR4302534.2045798/94‑1 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG > SRR4302534.4022745/1‑94 (MQ=60)
ATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTG < SRR4302534.3855234/94‑1 (MQ=60)
TAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGAC < SRR4302534.1137939/94‑1 (MQ=60)
ACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCC > SRR4302534.4643698/1‑94 (MQ=60)
ACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCC < SRR4302534.3715225/94‑1 (MQ=60)
ACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCC > SRR4302534.1817403/1‑94 (MQ=60)
CGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAA > SRR4302534.5612444/1‑94 (MQ=60)
TCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGG < SRR4302534.5491211/94‑1 (MQ=60)
TCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGG > SRR4302534.3186203/1‑94 (MQ=60)
CATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGA < SRR4302534.3112905/94‑1 (MQ=60)
ATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGAT < SRR4302534.4306182/94‑1 (MQ=60)
TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATG < SRR4302534.604644/94‑1 (MQ=60)
TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATG < SRR4302534.258233/94‑1 (MQ=60)
TTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATG < SRR4302534.3259530/94‑1 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCGAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA < SRR4302534.5205708/94‑1 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA < SRR4302534.835144/94‑1 (MQ=60)
ACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGA < SRR4302534.4287950/94‑1 (MQ=60)
GTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAA > SRR4302534.2555584/1‑94 (MQ=60)
TAACGGCGCTGGGAACAGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGCGAACGTTGATACCTCCCTGACCCAACGGATGGAAAA > SRR4302534.1230143/1‑94 (MQ=60)
ACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACC < SRR4302534.2701971/94‑1 (MQ=60)
CGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCG < SRR4302534.1920730/94‑1 (MQ=60)
GCGCTGGGAACGGACAGTTTTAGCCAGCAGATGTTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTC > SRR4302534.6592985/1‑94 (MQ=60)
GCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTC < SRR4302534.4530542/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.1497696/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.1232342/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.4304112/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.703953/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.1380919/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.3004661/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.152884/94‑1 (MQ=60)
CGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCT < SRR4302534.5115965/94‑1 (MQ=60)
GCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTG < SRR4302534.4066812/94‑1 (MQ=60)
CTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGC > SRR4302534.3664911/1‑94 (MQ=60)
TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC > SRR4302534.6344335/1‑94 (MQ=60)
TGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCC > SRR4302534.5192984/1‑94 (MQ=60)
GGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCG > SRR4302534.5332090/1‑94 (MQ=60)
GGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGG < SRR4302534.1538087/94‑1 (MQ=60)
GAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATTCCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGG < SRR4302534.1927418/94‑1 (MQ=60)
AACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGC > SRR4302534.2062936/1‑94 (MQ=60)
TCGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCC > SRR4302534.3699931/1‑94 (MQ=60)
ACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCC < SRR4302534.2749493/94‑1 (MQ=60)
ACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCC < SRR4302534.5414918/94‑1 (MQ=60)
CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT > SRR4302534.903894/1‑94 (MQ=60)
CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT > SRR4302534.6082081/1‑94 (MQ=60)
CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT < SRR4302534.5122297/94‑1 (MQ=60)
CGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCT > SRR4302534.4964405/1‑94 (MQ=60)
GGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT < SRR4302534.1547095/94‑1 (MQ=60)
GGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTT > SRR4302534.4687127/1‑94 (MQ=60)
GACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTT > SRR4302534.3511193/1‑94 (MQ=60)
GACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTT > SRR4302534.2713972/1‑94 (MQ=60)
ACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTA < SRR4302534.1434995/94‑1 (MQ=60)
CAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGTGAACGGTGATAACTCCCTGACCCCACGGATGTACAACCGTCTGCCGGGGCTTTAC > SRR4302534.821862/1‑94 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACTTTTATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT < SRR4302534.6577969/94‑1 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT > SRR4302534.104507/1‑94 (MQ=60)
AGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACT < SRR4302534.178530/94‑1 (MQ=60)
TTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC > SRR4302534.4804947/1‑94 (MQ=60)
TTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC > SRR4302534.2333129/1‑94 (MQ=60)
TTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACA < SRR4302534.4177417/94‑1 (MQ=60)
TAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATT > SRR4302534.4605098/1‑94 (MQ=60)
AGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTG > SRR4302534.343326/1‑94 (MQ=60)
AGCCAGCAGATGCTGCACGCCTGGCACGGCGTGAACGTTGATCCCTCCCTGACCCAACGGATGGAAAACCGTCGGCCGGGCCTTTACTACATTG < SRR4302534.4709211/94‑1 (MQ=60)
CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTTAA > SRR4302534.1269860/1‑94 (MQ=60)
CCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAA < SRR4302534.2563474/94‑1 (MQ=60)
CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA > SRR4302534.4711647/1‑94 (MQ=60)
CAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAA > SRR4302534.140560/1‑94 (MQ=60)
AGCAGATGCTGGACGCCTGGCACGGCGAGAACGGTGATAACTCCCTGACCCAACGGATGGTAAAAGGCGTGACGGGCCTTTACTACATTGGAAC > SRR4302534.1976915/1‑94 (MQ=44)
GCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACC > SRR4302534.3355903/1‑94 (MQ=60)
CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG > SRR4302534.5221168/1‑94 (MQ=60)
CAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCG < SRR4302534.5268477/94‑1 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA > SRR4302534.3201924/1‑94 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA > SRR4302534.512808/1‑94 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA > SRR4302534.4845227/1‑94 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA > SRR4302534.585937/1‑94 (MQ=60)
AGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGA < SRR4302534.2215360/94‑1 (MQ=60)
GATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGAC < SRR4302534.1293409/94‑1 (MQ=60)
ATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACA < SRR4302534.4960089/94‑1 (MQ=60)
ATGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACA < SRR4302534.5484203/94‑1 (MQ=60)
TGCTGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAG > SRR4302534.3966191/1‑94 (MQ=60)
TGGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCAC > SRR4302534.1331050/1‑94 (MQ=60)
gggcaCCTGGCACGGCGAGAAGGTTGATGCCTCCCTGACCGAACGGATGAAAAACCGTCTTCCGGTCTTTTACTACATTGAAACCGACAGCACC < SRR4302534.814159/89‑1 (MQ=55)
GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC > SRR4302534.1763507/1‑94 (MQ=60)
GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC < SRR4302534.4923086/94‑1 (MQ=60)
GGACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACC > SRR4302534.3834206/1‑94 (MQ=60)
ACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG > SRR4302534.2514374/1‑94 (MQ=60)
ACGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGG < SRR4302534.1011982/94‑1 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGG > SRR4302534.3151412/1‑94 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC < SRR4302534.1205726/94‑1 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC > SRR4302534.2727764/1‑94 (MQ=60)
CGCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC < SRR4302534.2188208/94‑1 (MQ=60)
CGCCTGGCACGGCAAGAACGTTGATACCTCCCTGACCCAACGGATGGACACCCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGC < SRR4302534.6640492/94‑1 (MQ=60)
GCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCG < SRR4302534.5837580/94‑1 (MQ=60)
GCCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCG < SRR4302534.3207940/94‑1 (MQ=60)
CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA > SRR4302534.2275397/1‑94 (MQ=60)
CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA > SRR4302534.6421440/1‑94 (MQ=60)
CCTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGA < SRR4302534.5849692/94‑1 (MQ=60)
CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG < SRR4302534.5332732/94‑1 (MQ=60)
CTGGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAG < SRR4302534.724520/94‑1 (MQ=60)
TGGCACGGCAAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGC > SRR4302534.6449481/1‑94 (MQ=60)
GGCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCG > SRR4302534.4572314/1‑94 (MQ=60)
GCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACTGACAGCACCGGCGGGCGT > SRR4302534.3729323/1‑94 (MQ=60)
GCACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGT > SRR4302534.5979902/1‑94 (MQ=60)
CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA > SRR4302534.1661774/1‑94 (MQ=60)
CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA > SRR4302534.6539540/1‑94 (MQ=60)
CACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTA > SRR4302534.3743897/1‑94 (MQ=60)
ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC < SRR4302534.737031/94‑1 (MQ=60)
ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC < SRR4302534.471353/94‑1 (MQ=60)
ACGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTAC < SRR4302534.3829380/94‑1 (MQ=60)
CGGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACG < SRR4302534.5565135/94‑1 (MQ=60)
GGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGT > SRR4302534.1246677/1‑94 (MQ=60)
GGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGT > SRR4302534.4666815/1‑94 (MQ=60)
GGCGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGT < SRR4302534.3927968/94‑1 (MQ=60)
CGAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTGC > SRR4302534.1820897/1‑94 (MQ=60)
GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT > SRR4302534.2208748/1‑94 (MQ=60)
GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT < SRR4302534.5002406/94‑1 (MQ=60)
GAGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCT < SRR4302534.2802999/94‑1 (MQ=60)
GGAACGTTGGTACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA < SRR4302534.6362024/94‑1 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA < SRR4302534.996273/94‑1 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA > SRR4302534.1913099/1‑94 (MQ=60)
AGAACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTA > SRR4302534.244379/1‑94 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTTCGTTCTACT < SRR4302534.6475005/94‑1 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT < SRR4302534.6067952/94‑1 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT > SRR4302534.3402013/1‑94 (MQ=60)
AACGTTGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGCACGTTCTACT > SRR4302534.5302899/1‑94 (MQ=60)
AACGTTGATACCTCCCCGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACT < SRR4302534.625502/94‑1 (MQ=60)
TGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGG > SRR4302534.5847482/1‑94 (MQ=60)
TGATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGG > SRR4302534.4803611/1‑94 (MQ=60)
ATACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCG < SRR4302534.1390866/94‑1 (MQ=60)
ACCTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGA < SRR4302534.2694105/94‑1 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC < SRR4302534.5709175/94‑1 (MQ=60)
CTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > SRR4302534.3348764/1‑94 (MQ=60)
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TGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAAC > NC_000913/3677177‑3677363
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
