Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,738,723 A→G intergenic (+136/+15) avtA → / ← yiaI alanine‑alpha‑ketoisovalerate transaminase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,738,7230AG99.5% 1286.0 / ‑4.3 380intergenic (+136/+15)avtA/yiaIalanine‑alpha‑ketoisovalerate transaminase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (204/174);  total (204/176)
Fisher's exact test for biased strand distribution p-value = 2.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

Only 100 of 404 total aligned reads displayed.

AATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA  >  NC_000913/3738633‑3738812
                                                                                          |                                                                                         
aaTATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCg                                                                                         >  2:6742106/1‑93 (MQ=255)
 atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        >  2:8188823/1‑93 (MQ=255)
 atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        >  2:5570895/1‑93 (MQ=255)
 atatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAgcgc                                                                                        >  2:5900789/1‑93 (MQ=255)
  tatatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGcc                                                                                       >  2:3232583/1‑93 (MQ=255)
    tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCgg                                                                                     >  1:8306113/1‑93 (MQ=255)
    tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCgg                                                                                     >  1:5246377/1‑93 (MQ=255)
    tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCgg                                                                                     >  2:1568783/1‑93 (MQ=255)
    tatTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCgg                                                                                     >  2:1691896/1‑93 (MQ=255)
     atTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGa                                                                                    >  1:7179970/1‑93 (MQ=255)
      ttGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGaa                                                                                   >  1:5881131/1‑93 (MQ=255)
      ttGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGaa                                                                                   >  1:6377694/1‑93 (MQ=255)
        gAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGaaaa                                                                                 <  2:7307105/93‑1 (MQ=255)
         aaTTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAAc                                                                                >  2:7965734/1‑93 (MQ=255)
         aaTTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAAc                                                                                <  1:5616014/93‑1 (MQ=255)
           tttGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGt                                                                              <  2:5011437/93‑1 (MQ=255)
            ttGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGtt                                                                             <  2:1861478/93‑1 (MQ=255)
            ttGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGtt                                                                             <  1:143773/93‑1 (MQ=255)
             tGGAAGGATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGttt                                                                            <  2:1510650/93‑1 (MQ=255)
             tGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGttt                                                                            <  1:6948043/93‑1 (MQ=255)
              ggAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGttta                                                                           >  1:5978868/1‑92 (MQ=255)
              ggAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTc                                                                           >  1:335905/1‑93 (MQ=255)
                    aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAg                                                                     >  1:4322182/1‑93 (MQ=255)
                    aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAg                                                                     >  2:8809059/1‑93 (MQ=255)
                     tttGTATGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAgg                                                                    <  2:5724843/93‑1 (MQ=255)
                     tttGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAgg                                                                    >  1:2073282/1‑93 (MQ=255)
                         tAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgc                                                                <  1:7951119/93‑1 (MQ=255)
                         tAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgc                                                                <  2:4047113/93‑1 (MQ=255)
                         tAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGgctgc                                                                <  1:1292951/93‑1 (MQ=255)
                           ggCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGctgctg                                                              <  1:3908495/93‑1 (MQ=255)
                            gCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCtgctgc                                                             <  1:8057995/93‑1 (MQ=255)
                             ccGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGcc                                                            >  1:8626567/1‑93 (MQ=255)
                              cGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCg                                                           >  1:3694653/1‑93 (MQ=255)
                              cGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCg                                                           <  1:3035252/93‑1 (MQ=255)
                               ggATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCga                                                          >  1:8366681/1‑92 (MQ=255)
                                gATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGtg                                                         >  1:7401775/1‑92 (MQ=255)
                                gATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTa                                                         >  2:7165267/1‑93 (MQ=255)
                                gATAAGGCGTATACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTa                                                         <  2:5336061/93‑1 (MQ=255)
                                 aTAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAg                                                        <  1:8522599/93‑1 (MQ=255)
                                  tAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGc                                                       <  1:8252056/93‑1 (MQ=255)
                                   aaGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCTGAAAACGTTTCAAACAGGCTGCTGCCGTAGcc                                                      >  1:6094275/1‑93 (MQ=255)
                                   aaGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGcc                                                      <  2:8059973/93‑1 (MQ=255)
                                   aaGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGcc                                                      <  2:2587501/93‑1 (MQ=255)
                                      gCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAt                                                   >  1:5496105/1‑93 (MQ=255)
                                        gTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGc                                                 <  2:3860292/93‑1 (MQ=255)
                                         tttACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGcc                                                >  2:2334442/1‑93 (MQ=255)
                                         tttACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGcc                                                >  1:3482613/1‑93 (MQ=255)
                                           tACGCCGCATCTGGCATAAACAAAGCGCGCTGTTCCGGCGTTGAGAAGCGCGGGAAAACGTTTCAAACAAGCTGATGCCGTAGCCGATGCCGc                                              >  2:7705895/1‑93 (MQ=38)
                                           tACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGc                                              <  2:6894249/93‑1 (MQ=255)
                                            aCGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCt                                             <  1:1089853/93‑1 (MQ=255)
                                             cgccgcATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTg                                            <  1:2727227/93‑1 (MQ=255)
                                                   aTCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACttt                                      >  1:3081851/1‑93 (MQ=255)
                                                   aTCTGGCATAAACAAAGCGCACTGTGCAGGCGTTGAGAAGCGCCGGAAAACGTTTCAACCAGTCTGCTGCCGTAGCCGATGCCGCTGCACttt                                      <  2:4217902/93‑1 (MQ=38)
                                                     cTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtct                                    <  1:2536582/93‑1 (MQ=255)
                                                     cTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtct                                    <  2:6686349/93‑1 (MQ=255)
                                                     cTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtct                                    >  1:5063994/1‑93 (MQ=255)
                                                     cTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtct                                    <  1:1645452/93‑1 (MQ=255)
                                                      tGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTtctc                                   >  2:6530334/1‑93 (MQ=255)
                                                       ggCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCg                                  <  2:2071635/93‑1 (MQ=255)
                                                       ggCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCg                                  >  1:4494474/1‑93 (MQ=255)
                                                        gCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGa                                 >  1:2440606/1‑93 (MQ=255)
                                                          aTAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACa                               >  2:1057857/1‑93 (MQ=255)
                                                          aTAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACa                               >  1:1734368/1‑93 (MQ=255)
                                                           tAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCTGATGCCGCTGCACTTTCTCGACAt                              >  2:2870317/1‑93 (MQ=255)
                                                           tAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAt                              >  1:1879443/1‑93 (MQ=255)
                                                            aaaCAAAGCGCGCTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATc                             <  2:3565446/93‑1 (MQ=255)
                                                            aaaCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATc                             <  1:7732723/93‑1 (MQ=255)
                                                              aCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCa                           <  2:1995179/93‑1 (MQ=255)
                                                              aCAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCa                           <  1:183484/93‑1 (MQ=255)
                                                               cAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAt                          <  2:1153180/93‑1 (MQ=255)
                                                               cAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAt                          <  2:3651951/93‑1 (MQ=255)
                                                               cAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAt                          <  1:4011311/93‑1 (MQ=255)
                                                                aaaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATg                         <  2:4729589/93‑1 (MQ=255)
                                                                 aaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGc                        >  1:3638047/1‑93 (MQ=255)
                                                                 aaGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGc                        >  1:8820880/1‑93 (MQ=255)
                                                                  aGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCa                       >  1:4979466/1‑93 (MQ=255)
                                                                   gcgcACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAc                      >  1:2564311/1‑93 (MQ=255)
                                                                   gcgcACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAc                      >  2:1370852/1‑93 (MQ=255)
                                                                   gcgcACTGTTCCGGCGTGGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAc                      <  1:1162077/93‑1 (MQ=255)
                                                                    cgcACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACt                     <  2:7859610/93‑1 (MQ=255)
                                                                     gcACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTg                    >  1:6553/1‑93 (MQ=255)
                                                                      cACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGc                   >  2:839014/1‑93 (MQ=255)
                                                                      cACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGc                   >  2:6272330/1‑93 (MQ=255)
                                                                       aCTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCa                  >  1:2172408/1‑93 (MQ=255)
                                                                       aCTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCa                  >  1:4627203/1‑93 (MQ=255)
                                                                          gTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACg               >  2:4445493/1‑93 (MQ=255)
                                                                             ccGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCt            <  2:7433619/93‑1 (MQ=255)
                                                                             ccGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCt            <  2:2184363/93‑1 (MQ=255)
                                                                              cGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCtt           <  1:3796111/93‑1 (MQ=255)
                                                                               ggCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCttt          <  2:8614199/93‑1 (MQ=255)
                                                                               ggCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCttt          <  1:5227132/93‑1 (MQ=255)
                                                                                gCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTg         >  1:6843244/1‑93 (MQ=255)
                                                                                 cGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGt        <  1:7049984/93‑1 (MQ=255)
                                                                                  gTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       <  2:7515723/93‑1 (MQ=255)
                                                                                  gTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       >  2:4192503/1‑93 (MQ=255)
                                                                                  gTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTc       >  2:1790024/1‑93 (MQ=255)
                                                                                    tGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCgg     >  2:3115433/1‑93 (MQ=255)
                                                                                      agaAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGc   >  1:4131640/1‑93 (MQ=255)
                                                                                       gaAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCa  <  2:5138256/93‑1 (MQ=255)
                                                                                       gaAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCa  <  2:6060436/93‑1 (MQ=255)
                                                                                          |                                                                                         
AATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA  >  NC_000913/3738633‑3738812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 227 total aligned reads displayed.
TGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  NC_000913/3738630‑3738816
                                                                                             |                                                                                             
TGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAG                                                                                               >  SRR4302541.8193679/1‑94 (MQ=60)
 GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGC                                                                                              <  SRR4302541.5928915/94‑1 (MQ=60)
 GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGC                                                                                              <  SRR4302541.6862103/94‑1 (MQ=60)
 GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGC                                                                                              >  SRR4302541.4228450/1‑94 (MQ=60)
 GCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGC                                                                                              >  SRR4302541.1433817/1‑94 (MQ=60)
  CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCG                                                                                             <  SRR4302541.7575991/94‑1 (MQ=60)
  CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCG                                                                                             <  SRR4302541.7073852/94‑1 (MQ=60)
  CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCG                                                                                             <  SRR4302541.8722297/94‑1 (MQ=60)
  CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCG                                                                                             <  SRR4302541.1478500/94‑1 (MQ=60)
  CAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCG                                                                                             <  SRR4302541.1494407/94‑1 (MQ=60)
   AATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGC                                                                                            <  SRR4302541.3869477/94‑1 (MQ=60)
    ATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCC                                                                                           <  SRR4302541.248681/94‑1 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTCCGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTCAGAAGCGCCGG                                                                                         <  SRR4302541.8133263/94‑1 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         >  SRR4302541.6937755/1‑94 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         <  SRR4302541.822290/94‑1 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         >  SRR4302541.5300430/1‑94 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         <  SRR4302541.4640009/94‑1 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         >  SRR4302541.5300432/1‑94 (MQ=60)
      ATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGG                                                                                         >  SRR4302541.8396416/1‑94 (MQ=60)
       TATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGA                                                                                        >  SRR4302541.7256553/1‑94 (MQ=60)
       TATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGA                                                                                        <  SRR4302541.7041202/94‑1 (MQ=60)
        ATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAA                                                                                       >  SRR4302541.3764399/1‑94 (MQ=60)
        ATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAA                                                                                       >  SRR4302541.6442853/1‑94 (MQ=60)
            AATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACG                                                                                   <  SRR4302541.3729248/94‑1 (MQ=60)
            AATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACG                                                                                   <  SRR4302541.8439255/94‑1 (MQ=60)
            AATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACG                                                                                   <  SRR4302541.5673491/94‑1 (MQ=60)
             ATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGT                                                                                  >  SRR4302541.8482544/1‑94 (MQ=60)
             ATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGT                                                                                  >  SRR4302541.3316371/1‑94 (MQ=60)
              TTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTT                                                                                 >  SRR4302541.5600402/1‑94 (MQ=60)
               TTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTT                                                                                <  SRR4302541.5968818/94‑1 (MQ=60)
               TTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTT                                                                                <  SRR4302541.144877/94‑1 (MQ=60)
               TTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTT                                                                                <  SRR4302541.1192218/94‑1 (MQ=60)
                TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTC                                                                               >  SRR4302541.338917/1‑94 (MQ=60)
                TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTA                                                                               >  SRR4302541.4472473/1‑94 (MQ=60)
                TGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTA                                                                               >  SRR4302541.6039992/1‑94 (MQ=60)
                  GAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAA                                                                             <  SRR4302541.2586933/94‑1 (MQ=60)
                   AAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAA                                                                            >  SRR4302541.4239772/1‑94 (MQ=60)
                   AAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAA                                                                            >  SRR4302541.3443638/1‑94 (MQ=60)
                    AGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAAC                                                                           >  SRR4302541.5788836/1‑94 (MQ=60)
                     GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACA                                                                          >  SRR4302541.3088748/1‑94 (MQ=60)
                     GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACA                                                                          >  SRR4302541.241234/1‑94 (MQ=60)
                     GAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGAACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGATTCAAACA                                                                          >  SRR4302541.1205910/1‑94 (MQ=60)
                      AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302541.4803132/94‑1 (MQ=60)
                      AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         >  SRR4302541.5467805/1‑94 (MQ=60)
                      AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         >  SRR4302541.4365336/1‑94 (MQ=60)
                      AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302541.1689986/94‑1 (MQ=60)
                      AATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAG                                                                         <  SRR4302541.1884603/94‑1 (MQ=60)
                       ATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGG                                                                        >  SRR4302541.2093325/1‑94 (MQ=60)
                       ATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGG                                                                        <  SRR4302541.866113/94‑1 (MQ=60)
                       ATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGG                                                                        >  SRR4302541.3449174/1‑94 (MQ=60)
                        TTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGAGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGC                                                                       >  SRR4302541.8424876/1‑94 (MQ=60)
                         TTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCT                                                                      <  SRR4302541.1165644/94‑1 (MQ=60)
                         TTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCT                                                                      <  SRR4302541.2153791/94‑1 (MQ=60)
                          TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTTAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     >  SRR4302541.2240435/1‑94 (MQ=60)
                          TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     >  SRR4302541.3825278/1‑94 (MQ=60)
                          TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     >  SRR4302541.4185727/1‑94 (MQ=60)
                          TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTG                                                                     <  SRR4302541.1725341/94‑1 (MQ=60)
                          TGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTGCAAACAGGCTG                                                                     >  SRR4302541.7892593/1‑94 (MQ=60)
                           GTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCTTAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGC                                                                    >  SRR4302541.1794825/1‑94 (MQ=60)
                            TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   <  SRR4302541.5535417/94‑1 (MQ=60)
                            TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   >  SRR4302541.5900201/1‑94 (MQ=60)
                            TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   >  SRR4302541.8385429/1‑94 (MQ=60)
                            TAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCT                                                                   <  SRR4302541.8038725/94‑1 (MQ=60)
                            TAGGCCGGATAAGGCGTTTACGCCACATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCG                                                                   >  SRR4302541.1740003/1‑94 (MQ=60)
                             AGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTG                                                                  >  SRR4302541.8287951/1‑94 (MQ=60)
                             AGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTG                                                                  >  SRR4302541.2576434/1‑94 (MQ=60)
                             AGGCCGGATAAGGCATTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCGGGAAAACGTTTCAAACAGGCTGCTG                                                                  <  SRR4302541.3538951/94‑1 (MQ=60)
                              GGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGC                                                                 <  SRR4302541.3947550/94‑1 (MQ=60)
                              GGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGC                                                                 >  SRR4302541.917317/1‑94 (MQ=60)
                               GCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCC                                                                <  SRR4302541.8146542/94‑1 (MQ=60)
                               GCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCC                                                                >  SRR4302541.3754635/1‑94 (MQ=60)
                               GCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCC                                                                <  SRR4302541.5014355/94‑1 (MQ=60)
                                CCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCG                                                               >  SRR4302541.3732021/1‑94 (MQ=60)
                                CCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCG                                                               <  SRR4302541.1307426/94‑1 (MQ=60)
                                 CGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGT                                                              <  SRR4302541.6986555/94‑1 (MQ=60)
                                 CGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGT                                                              <  SRR4302541.3065903/94‑1 (MQ=60)
                                 CGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGT                                                              >  SRR4302541.1981230/1‑94 (MQ=60)
                                 CGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGA                                                              >  SRR4302541.8457395/1‑94 (MQ=60)
                                  GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTG                                                             >  SRR4302541.7480938/1‑94 (MQ=60)
                                  GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302541.4443687/1‑94 (MQ=60)
                                  GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302541.8673950/1‑94 (MQ=60)
                                  GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302541.524609/1‑94 (MQ=60)
                                  GGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGATTCAAACAGGCTGCTGCCGTA                                                             >  SRR4302541.8673951/1‑94 (MQ=60)
                                   GATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAG                                                            >  SRR4302541.8385466/1‑94 (MQ=60)
                                    ATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGC                                                           <  SRR4302541.8614312/94‑1 (MQ=60)
                                     TAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCTGAAAACGTTTCAAACAGGCTGCTGCCGTAGCC                                                          >  SRR4302541.6156488/1‑94 (MQ=60)
                                      AAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCG                                                         >  SRR4302541.634123/1‑94 (MQ=60)
                                      AAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCG                                                         >  SRR4302541.2660044/1‑94 (MQ=60)
                                       AGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGA                                                        >  SRR4302541.1394405/1‑94 (MQ=60)
                                        GGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAT                                                       >  SRR4302541.63221/1‑94 (MQ=60)
                                        GGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGAT                                                       >  SRR4302541.5552428/1‑94 (MQ=60)
                                        GGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGGAGCCGAT                                                       >  SRR4302541.7334276/1‑94 (MQ=60)
                                          CGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGC                                                     >  SRR4302541.8726735/1‑94 (MQ=60)
                                           cgTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302541.5170191/3‑94 (MQ=60)
                                           GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302541.3517466/1‑94 (MQ=60)
                                           GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302541.4060772/1‑94 (MQ=60)
                                           GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302541.1396569/1‑94 (MQ=60)
                                           GTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC                                                    >  SRR4302541.8867028/1‑94 (MQ=60)
                                              TACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCT                                                 <  SRR4302541.265909/94‑1 (MQ=60)
                                              TACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCT                                                 <  SRR4302541.5981814/94‑1 (MQ=60)
                                              TACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCT                                                 <  SRR4302541.3034718/94‑1 (MQ=60)
                                              TACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCT                                                 <  SRR4302541.8207713/94‑1 (MQ=60)
                                               ACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTG                                                <  SRR4302541.1100044/94‑1 (MQ=60)
                                               ACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTG                                                >  SRR4302541.2186416/1‑94 (MQ=60)
                                                CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGC                                               <  SRR4302541.2754494/94‑1 (MQ=60)
                                                CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGC                                               >  SRR4302541.1659475/1‑94 (MQ=60)
                                                CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGC                                               <  SRR4302541.7412907/94‑1 (MQ=60)
                                                CGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGC                                               >  SRR4302541.3856240/1‑94 (MQ=60)
                                                 GCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              <  SRR4302541.8752828/94‑1 (MQ=60)
                                                 GCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCA                                              >  SRR4302541.3716976/1‑94 (MQ=60)
                                                  CCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCAC                                             <  SRR4302541.8342145/94‑1 (MQ=60)
                                                  CCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCAC                                             >  SRR4302541.1289597/1‑94 (MQ=60)
                                                   CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            >  SRR4302541.2504050/1‑94 (MQ=60)
                                                   CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            >  SRR4302541.307076/1‑94 (MQ=60)
                                                   CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            <  SRR4302541.3929519/94‑1 (MQ=60)
                                                   CGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACT                                            >  SRR4302541.930929/1‑94 (MQ=60)
                                                    GCATCTGGCATAAACAAAGCGCCATGTTCCGGCGTTGAGACGCGCCGAAAACCGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTT                                           <  SRR4302541.6068124/94‑1 (MQ=60)
                                                    GCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTT                                           <  SRR4302541.6068123/94‑1 (MQ=60)
                                                     CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          >  SRR4302541.3113127/1‑94 (MQ=60)
                                                     CATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTGT                                          >  SRR4302541.7877358/1‑94 (MQ=60)
                                                     CAACTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTT                                          >  SRR4302541.7085514/1‑94 (MQ=60)
                                                       TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        >  SRR4302541.3953887/1‑94 (MQ=60)
                                                       TCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        >  SRR4302541.5116063/1‑94 (MQ=60)
                                                       TCTGGCAAAAACAAAGCGCACTGTACCGGCGTTGAGAAGCGACGGAAAACGTTTCAAACAGCCTGCTGCCGTAGCCGATGCCGCTGCACTTTCT                                        <  SRR4302541.7901296/94‑1 (MQ=60)
                                                        CTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTC                                       <  SRR4302541.2562052/94‑1 (MQ=60)
                                                        CTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTC                                       <  SRR4302541.1661713/94‑1 (MQ=60)
                                                        CTGGCATAAACAAAGCGCACTGTTCAGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGATGCTGCCGAAGCCGAAGCCGCTGCACTTTCTT                                       >  SRR4302541.5984798/1‑94 (MQ=60)
                                                        CTGGCATAAACAAAGCGCACTGATCCGATGTTGTGAAGCGCGGGAAAACGTTTCAAACAGGATGCGGCTGTAGCCGActgcgttgcactttttg                                       >  SRR4302541.2683583/1‑77 (MQ=19)
                                                         TGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCG                                      >  SRR4302541.4539789/1‑94 (MQ=60)
                                                         TGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCG                                      <  SRR4302541.4548748/94‑1 (MQ=60)
                                                          GGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCCCTTTCTAGA                                     >  SRR4302541.2548583/1‑94 (MQ=60)
                                                          GGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGA                                     >  SRR4302541.2464805/1‑94 (MQ=60)
                                                            CATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACA                                   >  SRR4302541.3701735/1‑94 (MQ=60)
                                                            CATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACA                                   >  SRR4302541.1751297/1‑94 (MQ=60)
                                                             ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302541.4051925/1‑94 (MQ=60)
                                                             ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302541.1897513/1‑94 (MQ=60)
                                                             ATAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACAT                                  >  SRR4302541.16232/1‑94 (MQ=60)
                                                              TAAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATC                                 >  SRR4302541.1870363/1‑94 (MQ=60)
                                                               AAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCC                                <  SRR4302541.7814998/94‑1 (MQ=60)
                                                               AAACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCC                                <  SRR4302541.3609464/94‑1 (MQ=60)
                                                                AACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCA                               <  SRR4302541.8430644/94‑1 (MQ=60)
                                                                AACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGAAGCCGATGCCGCTGCACTTTCTCGACATCCA                               >  SRR4302541.2753048/1‑94 (MQ=60)
                                                                 ACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              <  SRR4302541.8600109/94‑1 (MQ=60)
                                                                 ACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              >  SRR4302541.5671278/1‑94 (MQ=60)
                                                                 ACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              <  SRR4302541.184860/94‑1 (MQ=60)
                                                                 ACAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCAT                              <  SRR4302541.8088030/94‑1 (MQ=60)
                                                                  CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             <  SRR4302541.4050991/94‑1 (MQ=60)
                                                                  CAAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATG                             <  SRR4302541.4050990/94‑1 (MQ=60)
                                                                   AAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGC                            <  SRR4302541.6116097/94‑1 (MQ=60)
                                                                   AAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGC                            >  SRR4302541.3674930/1‑94 (MQ=60)
                                                                   AAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGC                            >  SRR4302541.8915022/1‑94 (MQ=60)
                                                                   AAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGC                            >  SRR4302541.6541294/1‑94 (MQ=60)
                                                                   AAAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGC                            >  SRR4302541.2949651/1‑94 (MQ=60)
                                                                    AAGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCA                           >  SRR4302541.5030530/1‑94 (MQ=60)
                                                                     AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          >  SRR4302541.1102800/1‑94 (MQ=60)
                                                                     AGCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCAC                          >  SRR4302541.2590012/1‑94 (MQ=60)
                                                                      GCGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACT                         <  SRR4302541.5044003/94‑1 (MQ=60)
                                                                      GCGCACTGTTCCGGCGTGGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACT                         <  SRR4302541.1173231/94‑1 (MQ=60)
                                                                       ccccCTGTTCCGGCGTTGAAAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTG                        <  SRR4302541.7570757/90‑1 (MQ=60)
                                                                       CGCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTG                        >  SRR4302541.6603/1‑94 (MQ=60)
                                                                        GCACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGC                       >  SRR4302541.7801342/1‑94 (MQ=60)
                                                                         CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302541.4674272/1‑94 (MQ=60)
                                                                         CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302541.5655361/1‑94 (MQ=60)
                                                                         CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302541.7019312/1‑94 (MQ=60)
                                                                         CACTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCA                      >  SRR4302541.2193409/1‑94 (MQ=60)
                                                                           CTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAAC                    >  SRR4302541.184960/1‑94 (MQ=60)
                                                                           CTGTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAAC                    <  SRR4302541.3283411/94‑1 (MQ=60)
                                                                             GTTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGC                  <  SRR4302541.4956079/94‑1 (MQ=60)
                                                                              TTCCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCC                 <  SRR4302541.7147930/94‑1 (MQ=60)
                                                                                CCGTCGTGGAGAAGCGCCGGAAAACTTTTCAAACAGGCTGCTGCCGTAGCCGATTCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTT               <  SRR4302541.2181837/94‑1 (MQ=60)
                                                                                CCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTT               <  SRR4302541.6798691/94‑1 (MQ=60)
                                                                                CCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTT               <  SRR4302541.5390454/94‑1 (MQ=60)
                                                                                CCGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACCTTCTCGACATCCATGCACTGCAACGCCTT               >  SRR4302541.5290872/1‑94 (MQ=60)
                                                                                 CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              <  SRR4302541.3422167/94‑1 (MQ=60)
                                                                                 CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              <  SRR4302541.3834307/94‑1 (MQ=60)
                                                                                 CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              <  SRR4302541.6524282/94‑1 (MQ=60)
                                                                                 CGGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTT              >  SRR4302541.6797811/1‑94 (MQ=60)
                                                                                  GGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTG             <  SRR4302541.5280992/94‑1 (MQ=60)
                                                                                  GGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTG             >  SRR4302541.6916417/1‑94 (MQ=60)
                                                                                  GGCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTG             <  SRR4302541.4395584/94‑1 (MQ=60)
                                                                                   GCGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGT            <  SRR4302541.442293/94‑1 (MQ=60)
                                                                                    CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           <  SRR4302541.7124964/94‑1 (MQ=60)
                                                                                    CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTC           <  SRR4302541.7124965/94‑1 (MQ=60)
                                                                                    CGTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCCGCACTTTCTCGCCATCCATGCACTGCAACGCCTTTGAC           >  SRR4302541.5211104/1‑94 (MQ=60)
                                                                                     GTTGAGAATGGCTGGAAAACGTTTCAAACAGGTTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGGCG          <  SRR4302541.1944068/94‑1 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302541.5072639/94‑1 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          >  SRR4302541.5895354/1‑94 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302541.6513922/94‑1 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302541.8698483/94‑1 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302541.7024048/94‑1 (MQ=60)
                                                                                     GTTGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCG          <  SRR4302541.1159529/94‑1 (MQ=60)
                                                                                       TGAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGG        <  SRR4302541.7347328/94‑1 (MQ=60)
                                                                                        GAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGC       >  SRR4302541.4172453/1‑94 (MQ=60)
                                                                                        GAGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGC       >  SRR4302541.1847434/1‑94 (MQ=60)
                                                                                         AGAAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCA      <  SRR4302541.3074387/94‑1 (MQ=60)
                                                                                           AAGCGCCGGAAACCGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGG    <  SRR4302541.181046/94‑1 (MQ=60)
                                                                                           AAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGG    >  SRR4302541.8055905/1‑94 (MQ=60)
                                                                                           AAGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGG    >  SRR4302541.6925493/1‑94 (MQ=60)
                                                                                            AGCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGC   <  SRR4302541.7785657/94‑1 (MQ=60)
                                                                                             GCGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  SRR4302541.5016383/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCCGCTGCACTTTCTCGACATCCATGCACTGCAACGCCTTTGTCGGGCAGGCT  >  NC_000913/3738630‑3738816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑