Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,771,793	T→C	V629A (GTG→GCG)	mtlA →	PTS system, mannitol‑specific enzyme IIABC components

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,771,793	0	T	C	99.8%	1567.6 / ‑5.1	451	V629A (GTG→GCG)	mtlA	PTS system, mannitol‑specific enzyme IIABC components
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (247/203); total (247/204)
Fisher's exact test for biased strand distribution p-value = 4.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.18e-01

Only 100 of 464 total aligned reads displayed.

AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAT  >  NC_000913/3771703‑3771882

aGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAgcgc                                                                                         >  2:4789030/1‑93 (MQ=255)

 gCACATTCAGGTTTTCACCAGCCTGACCAATGCACTGGATGAGGAGTCCGATATCTACAGCCTTGCGCACAGCCGCAGCGTCGGTGAAgcgcg                                                                                        >  2:4915952/1‑92 (MQ=255)

 gCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCt                                                                                        >  1:435615/1‑93 (MQ=255)

  cacaTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTg                                                                                       <  2:3602884/93‑1 (MQ=255)

    caTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGa                                                                                     >  2:909879/1‑93 (MQ=255)

    caTTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGa                                                                                     <  2:1285295/93‑1 (MQ=255)

      ttCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAc                                                                                   <  2:5711702/93‑1 (MQ=255)

       tCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAct                                                                                  >  1:2247856/1‑93 (MQ=255)

       tCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCATCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAct                                                                                  <  1:2391587/93‑1 (MQ=255)

        cAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActg                                                                                 >  2:5747193/1‑93 (MQ=255)

         aGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgc                                                                                >  1:5764816/1‑93 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                               >  1:8775523/1‑93 (MQ=255)

          ggTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAActgct                                                                               >  2:5076431/1‑93 (MQ=255)

          cgctATCCCCAGGCTGACCAATGCACTGGACGACGAGTCCGTCACCGAGCGTCTGGCACACACCCCCAGCGTGGATGAAGCGCTGGAActgct                                                                               <  1:628079/90‑1 (MQ=255)

            ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTgg                                                                             >  1:8358547/1‑93 (MQ=255)

             tATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGc                                                                            <  1:6396491/93‑1 (MQ=255)

             tATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGc                                                                            >  1:762405/1‑93 (MQ=255)

              aTCACGAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCa                                                                           <  1:772090/93‑1 (MQ=255)

              aTCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGcg                                                                           >  2:2606711/1‑92 (MQ=255)

               tCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAg                                                                          <  2:7704932/93‑1 (MQ=255)

               tCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAg                                                                          <  1:8509672/93‑1 (MQ=255)

               tCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAg                                                                          >  2:3285847/1‑93 (MQ=255)

                cACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAgg                                                                         >  1:4785976/1‑93 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                        >  1:3450588/1‑93 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                        <  1:7871942/93‑1 (MQ=255)

                 aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGt                                                                        <  2:1491970/93‑1 (MQ=255)

                  ccAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATG‑AGCGCTGGAACTGCTGGCAGGTCg                                                                      >  1:3852357/1‑93 (MQ=255)

                   cAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCg                                                                      >  2:4155505/1‑93 (MQ=255)

                    aGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgt                                                                     >  1:5303997/1‑93 (MQ=255)

                     gCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgta                                                                    >  2:5421304/1‑93 (MQ=255)

                      ccTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtca                                                                   >  2:7071031/1‑91 (MQ=255)

                       cTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaag                                                                  <  1:8402647/93‑1 (MQ=255)

                       cTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaag                                                                  <  1:7529337/93‑1 (MQ=255)

                        tGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagt                                                                 <  1:2725602/93‑1 (MQ=255)

                        tGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagt                                                                 <  2:3635844/93‑1 (MQ=255)

                        tGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaaga                                                                 >  2:6378780/1‑92 (MQ=255)

                         gACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCgtaagta                                                                >  2:8562186/1‑93 (MQ=255)

                           ccAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaat                                                              <  2:3375157/93‑1 (MQ=255)

                            cAATGCACTGGATGATGAGTCCGTCATCGGGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatc                                                             <  1:161756/93‑1 (MQ=255)

                            cAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatc                                                             <  2:6137053/93‑1 (MQ=255)

                             aaTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatcc                                                            >  1:7328713/1‑93 (MQ=255)

                             aaTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatac                                                            >  2:5825938/1‑91 (MQ=255)

                              aTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatcca                                                           <  1:1280664/93‑1 (MQ=255)

                              aTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatcca                                                           >  1:286793/1‑93 (MQ=255)

                               tGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaa                                                          <  1:6604431/93‑1 (MQ=255)

                               tGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaa                                                          >  2:105745/1‑93 (MQ=255)

                               tGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaa                                                          >  2:186575/1‑93 (MQ=255)

                               tGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaa                                                          <  2:2316640/93‑1 (MQ=255)

                                gCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaat                                                         <  2:2028919/93‑1 (MQ=255)

                                 cACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaatc                                                        >  2:8673301/1‑93 (MQ=255)

                                 cACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTaatccaatc                                                        >  1:502325/1‑93 (MQ=255)

                                     ggATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGCACTGCTGGCAGGTCGTAAGTAATCCAATCCCAc                                                    >  2:3150871/1‑93 (MQ=255)

                                     ggATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAc                                                    >  1:1886075/1‑93 (MQ=255)

                                      gatgatGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAcc                                                   <  1:5067729/93‑1 (MQ=255)

                                      gatgatGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAcc                                                   >  1:1518343/1‑93 (MQ=255)

                                       gtgatgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAccc                                                  <  2:8289497/92‑1 (MQ=255)

                                        tgatgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGCGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCAAATCCCACAct                                                 >  1:8105240/1‑93 (MQ=255)

                                         gatgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCctc                                                <  2:4017929/93‑1 (MQ=255)

                                          atgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCctct                                               <  1:3286297/93‑1 (MQ=255)

                                           tgaGTCCGTCATCGAGCGTATGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCtctc                                              >  2:3793048/1‑93 (MQ=255)

                                            gaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTcc                                             <  1:611018/93‑1 (MQ=255)

                                             aGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCca                                            >  2:3524693/1‑93 (MQ=255)

                                               tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCcaca                                          >  2:2196030/1‑93 (MQ=255)

                                                 cGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATg                                        >  1:4421724/1‑93 (MQ=255)

                                                   tCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGga                                      <  1:1947579/93‑1 (MQ=255)

                                                      tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGaa                                   >  1:5976237/1‑93 (MQ=255)

                                                      tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGaa                                   <  2:7975294/93‑1 (MQ=255)

                                                      tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGaa                                   >  1:6978354/1‑93 (MQ=255)

                                                        gAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAgg                                 <  2:4577793/93‑1 (MQ=255)

                                                        gAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAgg                                 >  1:1007965/1‑93 (MQ=255)

                                                          gCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTg                               >  1:4227919/1‑93 (MQ=255)

                                                          gCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTg                               >  2:7507795/1‑93 (MQ=255)

                                                           cGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTgg                              <  1:4541731/93‑1 (MQ=255)

                                                           cGTCTGGCACACACCACCAGCGTGGATGAACCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTgg                              <  2:4454326/93‑1 (MQ=255)

                                                            gTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTggg                             <  2:8380066/93‑1 (MQ=255)

                                                             tCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTgggg                            <  1:5515050/93‑1 (MQ=255)

                                                               tGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGtt                          >  1:5360652/1‑93 (MQ=255)

                                                               tGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGtt                          <  2:825395/93‑1 (MQ=255)

                                                               tGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGtt                          >  2:3071431/1‑93 (MQ=255)

                                                               tGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGtt                          <  1:3047032/93‑1 (MQ=255)

                                                                ggCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTa                         <  1:6751546/93‑1 (MQ=255)

                                                                ggCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTa                         <  1:3687101/93‑1 (MQ=255)

                                                                  cacacaCCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAAt                       <  2:6012111/93‑1 (MQ=255)

                                                                   acacacCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAAtt                      <  1:7113015/93‑1 (MQ=255)

                                                                   acacacCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAAtt                      >  1:2565892/1‑93 (MQ=255)

                                                                   acacacCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAAtt                      <  2:4694725/93‑1 (MQ=255)

                                                                         caccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGa                <  2:2451319/93‑1 (MQ=255)

                                                                         caccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGCGGGGTTAATTGCCTGa                >  2:6240097/1‑93 (MQ=255)

                                                                           ccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGGTg              >  1:1388223/1‑93 (MQ=255)

                                                                           ccaGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATg              <  2:648268/93‑1 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc           >  2:2776229/1‑93 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc           >  2:5308694/1‑93 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc           <  1:4707372/93‑1 (MQ=255)

                                                                              gCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc           >  2:4355854/1‑93 (MQ=255)

                                                                              gCGGGGATGAAGCGCGGGAACTGCTGGCAGGGCGGAAGGAAGCCAATCCCACCCGCGCCACATGGAGAAGGAGGGGGGAAGAGCCTGAAgcgc           >  2:6706817/1‑93 (MQ=255)

                                                                                gTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTa         >  1:5905164/1‑93 (MQ=255)

                                                                                    aTGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGGTGCGCTACGCt     <  2:6893101/93‑1 (MQ=255)

                                                                                     tGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCtt    <  1:82014/93‑1 (MQ=255)

                                                                                      gAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTa   >  1:4121290/1‑93 (MQ=255)

                                                                                       aaGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAt  >  1:923107/1‑93 (MQ=255)

AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAT  >  NC_000913/3771703‑3771882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 255 total aligned reads displayed.

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGG  >  NC_000913/3771700‑3771886

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGC                                                                                               >  SRR4302541.3229896/1‑94 (MQ=60)

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGC                                                                                               >  SRR4302541.3818678/1‑94 (MQ=60)

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGC                                                                                               <  SRR4302541.6257289/94‑1 (MQ=60)

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGC                                                                                               <  SRR4302541.1368258/94‑1 (MQ=60)

 CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                              >  SRR4302541.7563764/1‑94 (MQ=60)

 CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                              <  SRR4302541.1299637/94‑1 (MQ=60)

 CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                              >  SRR4302541.7563765/1‑94 (MQ=60)

 CGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCG                                                                                              <  SRR4302541.8165744/94‑1 (MQ=60)

  GAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGC                                                                                             >  SRR4302541.106135/1‑94 (MQ=60)

   AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCT                                                                                            >  SRR4302541.439720/1‑94 (MQ=60)

   AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCT                                                                                            <  SRR4302541.1631064/94‑1 (MQ=60)

   AGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCT                                                                                            >  SRR4302541.5946582/1‑94 (MQ=60)

     CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                          >  SRR4302541.8280115/1‑94 (MQ=60)

     CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                          >  SRR4302541.1503022/1‑94 (MQ=60)

     CACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGG                                                                                          >  SRR4302541.6170524/1‑94 (MQ=60)

     CACATGCAGGTTATCACCAGCCTGACCAATGCGCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACGCCACCAGCGTGGATGAAGCGCTGG                                                                                          <  SRR4302541.1127689/94‑1 (MQ=60)

       CATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAC                                                                                        >  SRR4302541.6213525/1‑94 (MQ=60)

       CATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAA                                                                                        >  SRR4302541.8770191/1‑94 (MQ=60)

        ATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAAC                                                                                       >  SRR4302541.7913928/1‑94 (MQ=60)

         TTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACT                                                                                      >  SRR4302541.2269592/1‑94 (MQ=60)

         TTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACT                                                                                      <  SRR4302541.7428048/94‑1 (MQ=60)

          TCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCATCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTG                                                                                     <  SRR4302541.2414994/94‑1 (MQ=60)

           CAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGC                                                                                    >  SRR4302541.5823487/1‑94 (MQ=60)

           CAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGC                                                                                    >  SRR4302541.8409333/1‑94 (MQ=60)

           CAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTAGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGC                                                                                    >  SRR4302541.6367948/1‑94 (MQ=60)

            AGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCT                                                                                   <  SRR4302541.5819953/94‑1 (MQ=60)

            AGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCT                                                                                   >  SRR4302541.8869318/1‑94 (MQ=60)

             cgctatccccaggCTGACCAATGCACTGGACGACGAGTCCGTCACCGAGCGTCTGGCACACACCCCCAGCGTGGATGAAGCGCTGGAACTGCTG                                                                                  <  SRR4302541.633977/81‑1 (MQ=60)

             GGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTG                                                                                  <  SRR4302541.633978/94‑1 (MQ=60)

              GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGG                                                                                 >  SRR4302541.8449220/1‑94 (MQ=60)

              GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGG                                                                                 >  SRR4302541.8727116/1‑94 (MQ=60)

               TTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGC                                                                                >  SRR4302541.769561/1‑94 (MQ=60)

               TTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGC                                                                                <  SRR4302541.4759732/94‑1 (MQ=60)

                TATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCA                                                                               <  SRR4302541.6461779/94‑1 (MQ=60)

                TATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCA                                                                               <  SRR4302541.3176689/94‑1 (MQ=60)

                TATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCA                                                                               <  SRR4302541.430868/94‑1 (MQ=60)

                 ATCACGAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAG                                                                              <  SRR4302541.779307/94‑1 (MQ=60)

                  TCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGG                                                                             >  SRR4302541.4834812/1‑94 (MQ=60)

                  TCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGG                                                                             >  SRR4302541.3511409/1‑94 (MQ=60)

                  TCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGG                                                                             <  SRR4302541.8601293/94‑1 (MQ=60)

                  TCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGG                                                                             >  SRR4302541.4834811/1‑94 (MQ=60)

                   CACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                            >  SRR4302541.5505115/1‑94 (MQ=60)

                   CACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                            >  SRR4302541.388047/1‑94 (MQ=60)

                   CACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGT                                                                            >  SRR4302541.3485059/1‑94 (MQ=60)

                    ACCAGCCTGACCAATGGACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACCCCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTC                                                                           <  SRR4302541.7958443/94‑1 (MQ=60)

                    ACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTC                                                                           <  SRR4302541.7958442/94‑1 (MQ=60)

                    ACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTC                                                                           <  SRR4302541.7958441/94‑1 (MQ=60)

                    ACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATG‑AGCGCTGGAACTGCTGGCAGGTCG                                                                          >  SRR4302541.3891131/1‑94 (MQ=60)

                     CCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCG                                                                          >  SRR4302541.6162057/1‑94 (MQ=60)

                     CCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCG                                                                          <  SRR4302541.910581/94‑1 (MQ=60)

                      CAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGT                                                                         >  SRR4302541.5358588/1‑94 (MQ=60)

                      CAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGT                                                                         >  SRR4302541.2611140/1‑94 (MQ=60)

                      CAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGT                                                                         >  SRR4302541.6764569/1‑94 (MQ=60)

                       AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                        >  SRR4302541.2370027/1‑94 (MQ=60)

                       AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                        <  SRR4302541.3277459/94‑1 (MQ=60)

                       AGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTA                                                                        >  SRR4302541.4191050/1‑94 (MQ=60)

                         CCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAG                                                                      >  SRR4302541.1950569/1‑94 (MQ=60)

                          CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGT                                                                     >  SRR4302541.4583713/1‑94 (MQ=60)

                          CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGT                                                                     >  SRR4302541.7789665/1‑94 (MQ=60)

                          CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGT                                                                     <  SRR4302541.8493557/94‑1 (MQ=60)

                          CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGT                                                                     <  SRR4302541.8493556/94‑1 (MQ=60)

                          CTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGCGGATGAAGCGCTGGAACTGCTGGCAGGCCGTAAGT                                                                     >  SRR4302541.4269280/1‑94 (MQ=60)

                           TGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTA                                                                    <  SRR4302541.2752843/94‑1 (MQ=60)

                           TGACCAATGCACTGGATGATGAGTCCGTCAGCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTA                                                                    <  SRR4302541.7625118/94‑1 (MQ=60)

                            GACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAA                                                                   >  SRR4302541.5399732/1‑94 (MQ=60)

                             ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACCCCCCCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTCAGTAAT                                                                  >  SRR4302541.247077/1‑94 (MQ=60)

                             ACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAAT                                                                  <  SRR4302541.2698272/94‑1 (MQ=60)

                               CAATGCACTGGATGATGAGTCCGTCATCGGGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCC                                                                <  SRR4302541.162967/94‑1 (MQ=60)

                               CAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGTAACTGCTGGCAGGGCGTAAGTAATCC                                                                >  SRR4302541.8273601/1‑94 (MQ=60)

                               CAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCC                                                                >  SRR4302541.7406971/1‑94 (MQ=60)

                               CAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCC                                                                >  SRR4302541.8914963/1‑94 (MQ=60)

                                AATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCA                                                               >  SRR4302541.289251/1‑94 (MQ=60)

                                 ATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAA                                                              <  SRR4302541.1293368/94‑1 (MQ=60)

                                  TGCCCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAAT                                                             <  SRR4302541.7076560/94‑1 (MQ=60)

                                  TGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAAT                                                             >  SRR4302541.7412882/1‑94 (MQ=60)

                                  TGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAAT                                                             <  SRR4302541.6672092/94‑1 (MQ=60)

                                  TGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGAAGGTCGTAAGTAATCCAAT                                                             >  SRR4302541.7919207/1‑94 (MQ=60)

                                  AGCACTGGATGATGAGTCCGTGATCGAGCGTCTGGCACACCCCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAAT                                                             <  SRR4302541.6672093/94‑1 (MQ=60)

                                   GCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATC                                                            >  SRR4302541.507047/1‑94 (MQ=60)

                                   GCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATC                                                            >  SRR4302541.7721190/1‑94 (MQ=60)

                                    CACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCC                                                           >  SRR4302541.4368660/1‑94 (MQ=60)

                                    CACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCC                                                           <  SRR4302541.8449502/94‑1 (MQ=60)

                                     ACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCC                                                          >  SRR4302541.1372952/1‑94 (MQ=60)

                                      CTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCA                                                         >  SRR4302541.6235912/1‑94 (MQ=60)

                                      CTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCA                                                         >  SRR4302541.6851299/1‑94 (MQ=60)

                                       TGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAC                                                        >  SRR4302541.4578325/1‑94 (MQ=60)

                                       TGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCAC                                                        >  SRR4302541.1904189/1‑94 (MQ=60)

                                        GGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACC                                                       >  SRR4302541.1533498/1‑94 (MQ=60)

                                        GGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACC                                                       >  SRR4302541.1533503/1‑94 (MQ=60)

                                         GATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCC                                                      <  SRR4302541.5119819/94‑1 (MQ=60)

                                         GATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCC                                                      >  SRR4302541.707187/1‑94 (MQ=60)

                                         GATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACGGCTGGCAGGTCGTAAGTAATCCAATCCCACCC                                                      <  SRR4302541.5119818/94‑1 (MQ=60)

                                          ATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCT                                                     <  SRR4302541.4561486/94‑1 (MQ=60)

                                          ATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGCGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCAAATCCCACACT                                                     >  SRR4302541.8194074/1‑94 (MQ=60)

                                           TGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTATGTAATCCAATCCCACCCTC                                                    >  SRR4302541.3075753/1‑94 (MQ=60)

                                           TGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTC                                                    >  SRR4302541.2226585/1‑94 (MQ=60)

                                           TGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTC                                                    >  SRR4302541.2226584/1‑94 (MQ=60)

                                            GATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCT                                                   <  SRR4302541.5408906/94‑1 (MQ=60)

                                            GATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCT                                                   >  SRR4302541.7425483/1‑94 (MQ=60)

                                             ATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTC                                                  <  SRR4302541.3319406/94‑1 (MQ=60)

                                             ATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTC                                                  >  SRR4302541.3076767/1‑94 (MQ=60)

                                               GAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCA                                                <  SRR4302541.616757/94‑1 (MQ=60)

                                               GAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCA                                                >  SRR4302541.3773002/1‑94 (MQ=60)

                                                AGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCAC                                               >  SRR4302541.7628709/1‑94 (MQ=60)

                                                 GTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACA                                              >  SRR4302541.1335073/1‑94 (MQ=60)

                                                  TCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACAT                                             <  SRR4302541.8544724/94‑1 (MQ=60)

                                                   CCGTCATCGAGCGTCTGGCACCCACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACACCCTCCACATG                                            >  SRR4302541.4466114/1‑94 (MQ=60)

                                                   CCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATG                                            >  SRR4302541.3098822/1‑94 (MQ=60)

                                                   CCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATG                                            >  SRR4302541.4466115/1‑94 (MQ=60)

                                                   CCGTCATCGAGCGTCTGGCACACACCACCAACCTGGATGAGACGCTGGAACTGCTCGCATGTCGTAAGTAATGCAATCCGACCCTCTTCACCTG                                            >  SRR4302541.4466116/1‑94 (MQ=38)

                                                    CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                           >  SRR4302541.2728914/1‑94 (MQ=60)

                                                    CGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGG                                           >  SRR4302541.6555033/1‑94 (MQ=60)

                                                     GTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGA                                          <  SRR4302541.1312916/94‑1 (MQ=60)

                                                     GTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGA                                          <  SRR4302541.3372282/94‑1 (MQ=60)

                                                      TCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAG                                         <  SRR4302541.1966347/94‑1 (MQ=60)

                                                      TCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAG                                         <  SRR4302541.148381/94‑1 (MQ=60)

                                                      CCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAG                                         <  SRR4302541.5434626/94‑1 (MQ=60)

                                                       CATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGA                                        >  SRR4302541.896610/1‑94 (MQ=60)

                                                        ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                       >  SRR4302541.6037283/1‑94 (MQ=60)

                                                        ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                       >  SRR4302541.7052708/1‑94 (MQ=60)

                                                        ATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAA                                       >  SRR4302541.237112/1‑94 (MQ=60)

                                                         TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                      >  SRR4302541.3878061/1‑94 (MQ=60)

                                                         TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                      <  SRR4302541.8358824/94‑1 (MQ=60)

                                                         TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                      <  SRR4302541.8229497/94‑1 (MQ=60)

                                                         TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                      <  SRR4302541.1887885/94‑1 (MQ=60)

                                                         TCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAG                                      >  SRR4302541.7651409/1‑94 (MQ=60)

                                                          CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                     >  SRR4302541.8002770/1‑94 (MQ=60)

                                                          CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                     >  SRR4302541.1017310/1‑94 (MQ=60)

                                                          CGAGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGG                                     <  SRR4302541.6001155/94‑1 (MQ=60)

                                                            AGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGCAGGTG                                   >  SRR4302541.1845200/1‑94 (MQ=60)

                                                            AGCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTG                                   >  SRR4302541.4270027/1‑94 (MQ=60)

                                                             GCGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGG                                  <  SRR4302541.5128591/94‑1 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCTGTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 <  SRR4302541.4698445/94‑1 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 <  SRR4302541.5054766/94‑1 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 <  SRR4302541.4698444/94‑1 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 <  SRR4302541.4587651/94‑1 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 >  SRR4302541.7083176/1‑94 (MQ=60)

                                                              CGTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGG                                 >  SRR4302541.5221453/1‑94 (MQ=60)

                                                              CGTCCGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCACTCCACATGGAGAAGGTGGG                                 <  SRR4302541.4698446/94‑1 (MQ=60)

                                                               GTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGG                                <  SRR4302541.8475857/94‑1 (MQ=60)

                                                               GTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGG                                <  SRR4302541.4073683/94‑1 (MQ=60)

                                                               GTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGG                                <  SRR4302541.5102773/94‑1 (MQ=60)

                                                               GTCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGG                                >  SRR4302541.8646746/1‑94 (MQ=60)

                                                                TCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGT                               <  SRR4302541.5571506/94‑1 (MQ=60)

                                                                TCTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGT                               <  SRR4302541.3488933/94‑1 (MQ=60)

                                                                 gtggcccacgCCACCAGCGTGGATGAAGCGGTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                              <  SRR4302541.2450732/84‑1 (MQ=60)

                                                                 CTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                              >  SRR4302541.5415713/1‑94 (MQ=60)

                                                                 CTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                              <  SRR4302541.7237987/94‑1 (MQ=60)

                                                                 CTGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTT                              <  SRR4302541.7237988/94‑1 (MQ=60)

                                                                  TGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTA                             <  SRR4302541.41945/94‑1 (MQ=60)

                                                                  TGGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTA                             <  SRR4302541.3077847/94‑1 (MQ=60)

                                                                   GGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAA                            <  SRR4302541.6823724/94‑1 (MQ=60)

                                                                   GGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAA                            <  SRR4302541.6823723/94‑1 (MQ=60)

                                                                   GGCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAA                            <  SRR4302541.3724418/94‑1 (MQ=60)

                                                                    GCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTTGGGTTAAT                           >  SRR4302541.5949071/1‑94 (MQ=60)

                                                                    GCACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAAT                           <  SRR4302541.1657029/94‑1 (MQ=60)

                                                                     CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                          >  SRR4302541.27919/1‑94 (MQ=60)

                                                                     CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                          >  SRR4302541.398612/1‑94 (MQ=60)

                                                                     CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                          >  SRR4302541.2768166/1‑94 (MQ=60)

                                                                     CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                          >  SRR4302541.2591605/1‑94 (MQ=60)

                                                                     CACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATT                          >  SRR4302541.2017928/1‑94 (MQ=60)

                                                                      ACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTG                         >  SRR4302541.284195/1‑94 (MQ=60)

                                                                      ACACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTG                         <  SRR4302541.7188773/94‑1 (MQ=60)

                                                                        ACACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCC                       >  SRR4302541.2271477/1‑94 (MQ=60)

                                                                         CACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCT                      <  SRR4302541.7853022/94‑1 (MQ=60)

                                                                         CACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCT                      <  SRR4302541.5580882/94‑1 (MQ=60)

                                                                          ACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTG                     >  SRR4302541.4882442/1‑94 (MQ=60)

                                                                          ACCACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTG                     >  SRR4302541.3581174/1‑94 (MQ=60)

                                                                            CACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGAT                   >  SRR4302541.6502304/1‑94 (MQ=60)

                                                                             ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGGTG                  >  SRR4302541.1401836/1‑94 (MQ=60)

                                                                             ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATG                  <  SRR4302541.1605227/94‑1 (MQ=60)

                                                                             ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATG                  <  SRR4302541.3422564/94‑1 (MQ=60)

                                                                             ACCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATG                  <  SRR4302541.1940246/94‑1 (MQ=60)

                                                                              CCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGGTGC                 <  SRR4302541.4335962/94‑1 (MQ=60)

                                                                              CCAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGC                 >  SRR4302541.8301137/1‑94 (MQ=60)

                                                                               CAGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCG                >  SRR4302541.5362727/1‑94 (MQ=60)

                                                                                AGCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGC               >  SRR4302541.5651515/1‑94 (MQ=60)

                                                                                 GCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCT              <  SRR4302541.4755365/94‑1 (MQ=60)

                                                                                 GCGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCT              <  SRR4302541.4755368/94‑1 (MQ=60)

                                                                                  CGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTA             >  SRR4302541.60200/1‑94 (MQ=60)

                                                                                  CGTGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTA             >  SRR4302541.5965264/1‑94 (MQ=60)

                                                                                    TGGATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACG           <  SRR4302541.6162570/94‑1 (MQ=60)

                                                                                     GGATGAAGCGCTGGAACTGCTGGCAGGTCGGAAGTAATCCAATCCCACCCACTCCACATGGAGAAGGTGGGGTTAAGTGCCTGATGCGCTACGT          >  SRR4302541.6752600/1‑94 (MQ=60)

                                                                                       ATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTT        <  SRR4302541.5855833/94‑1 (MQ=60)

                                                                                       ATGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTT        <  SRR4302541.5080990/94‑1 (MQ=60)

                                                                                        TGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTA       >  SRR4302541.4405595/1‑94 (MQ=60)

                                                                                        TGAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTA       >  SRR4302541.4161991/1‑94 (MQ=60)

                                                                                         GAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAT      <  SRR4302541.6518382/94‑1 (MQ=60)

                                                                                         GAAGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAT      <  SRR4302541.8503845/94‑1 (MQ=60)

                                                                                           AGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGGTGCGCTACGCTTATCA    <  SRR4302541.4898560/94‑1 (MQ=60)

                                                                                           AGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA    <  SRR4302541.5071587/94‑1 (MQ=60)

                                                                                           AGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA    >  SRR4302541.3422991/1‑94 (MQ=60)

                                                                                           AGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA    >  SRR4302541.6370071/1‑94 (MQ=60)

                                                                                           AGCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCA    <  SRR4302541.8173797/94‑1 (MQ=60)

                                                                                            GCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAG   <  SRR4302541.8697714/94‑1 (MQ=60)

                                                                                            GCGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAG   <  SRR4302541.1159077/94‑1 (MQ=60)

                                                                                             CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCCGG  >  SRR4302541.7798678/1‑94 (MQ=60)

                                                                                             CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGG  >  SRR4302541.6093892/1‑94 (MQ=60)

                                                                                             CGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGG  >  SRR4302541.472781/1‑94 (MQ=60)

                                                                                             CGCTGGAACTGCTGGCAGGTCGCAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATCAGCTACGCTTATCAGC  >  SRR4302541.7538230/1‑94 (MQ=60)

ACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGG  >  NC_000913/3771700‑3771886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`