Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,783,479 A→G D198G (GAT→GGT)  yibO → putative 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,783,4790AG99.7% 1189.8 / ‑5.0 351D198G (GAT→GGT) yibOputative 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (158/192);  total (159/192)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01

Only 100 of 365 total aligned reads displayed.

AATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATG  >  NC_000913/3783389‑3783568
                                                                                          |                                                                                         
   tCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTcgcg                                                                                      <  1:7579282/93‑1 (MQ=255)
    cGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGt                                                                                     >  2:6671668/1‑93 (MQ=255)
      aagaaAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAg                                                                                   >  1:4561096/1‑93 (MQ=255)
        gaaAAATTTGCCGCGCTGGGCAAATGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGaa                                                                                 <  1:5273461/93‑1 (MQ=255)
         aaaaaGTTGCCGCGCTGGGCAAACGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGaaa                                                                                <  1:8316383/93‑1 (MQ=255)
             aTTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGc                                                                            >  2:2481212/1‑93 (MQ=255)
             aTTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGc                                                                            <  1:7179952/93‑1 (MQ=255)
              tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCt                                                                           <  2:8227302/93‑1 (MQ=255)
              tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCt                                                                           <  2:8108681/93‑1 (MQ=255)
              tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCt                                                                           <  1:5829499/93‑1 (MQ=255)
              tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCt                                                                           <  1:7735976/93‑1 (MQ=255)
              tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCt                                                                           <  2:379732/93‑1 (MQ=255)
                tGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTa                                                                         <  2:3519261/93‑1 (MQ=255)
                tGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTa                                                                         <  1:6721797/93‑1 (MQ=255)
                tGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTa                                                                         <  1:4065441/93‑1 (MQ=255)
                  ccGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATg                                                                       >  1:2945862/1‑93 (MQ=255)
                   cgcgCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGa                                                                      >  1:2033212/1‑93 (MQ=255)
                    gcgcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATATCCGTTGGGGTCGCGTAGAAAAAGCTTATGAc                                                                     >  2:4858753/1‑93 (MQ=255)
                    gcgcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTTTGAc                                                                     <  2:5603534/93‑1 (MQ=255)
                    gcgcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAc                                                                     >  2:5918026/1‑93 (MQ=255)
                    gcgcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAc                                                                     >  2:2462192/1‑93 (MQ=255)
                      gcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAccg                                                                   >  1:489396/1‑92 (MQ=255)
                      gcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACct                                                                   >  1:5541520/1‑93 (MQ=255)
                      gcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACct                                                                   <  1:3723118/93‑1 (MQ=255)
                      gcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACct                                                                   >  2:2646006/1‑93 (MQ=255)
                      gcTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACct                                                                   >  2:4410239/1‑93 (MQ=255)
                       cTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACctg                                                                  >  2:4710370/1‑93 (MQ=255)
                          ggCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACctgctg                                                               <  1:133555/93‑1 (MQ=255)
                           gCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGTGGTCGCGTAGAAAAAGCTTATGACCTGCTGa                                                              >  1:5054638/1‑93 (MQ=255)
                           gCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGa                                                              <  2:7363904/93‑1 (MQ=255)
                            cAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGAc                                                             <  1:8705093/93‑1 (MQ=255)
                             aaaGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGAct                                                            >  1:3982070/1‑93 (MQ=255)
                              aaGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGActc                                                           >  2:2036604/1‑93 (MQ=255)
                              aaGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGActc                                                           >  2:117999/1‑93 (MQ=255)
                               agtccGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATATCCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGActct                                                          <  1:4687602/90‑1 (MQ=255)
                               aGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGActct                                                          <  1:4373937/93‑1 (MQ=255)
                               aGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGActct                                                          <  2:1521529/93‑1 (MQ=255)
                                ggCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTg                                                         >  2:6184178/1‑93 (MQ=255)
                                 gCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTgg                                                        <  1:6888371/93‑1 (MQ=255)
                                       tAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAgg                                                  >  2:3097470/1‑93 (MQ=255)
                                       tAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAgg                                                  <  2:4005441/93‑1 (MQ=255)
                                       tAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAgg                                                  <  2:5510816/93‑1 (MQ=255)
                                         gCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGc                                                >  2:1881591/1‑93 (MQ=255)
                                           gTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGa                                              >  1:175420/1‑93 (MQ=255)
                                            tCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAg                                             <  1:1936551/93‑1 (MQ=255)
                                             ccATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGt                                            <  2:6599716/93‑1 (MQ=255)
                                              catcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGtt                                           <  1:3066349/93‑1 (MQ=255)
                                              catcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGtt                                           <  2:5169617/93‑1 (MQ=255)
                                              catcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGACGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGtt                                           >  2:5697568/1‑93 (MQ=255)
                                               atcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTc                                          <  1:3179041/93‑1 (MQ=255)
                                               atcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTc                                          >  2:7117338/1‑93 (MQ=255)
                                               atcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTc                                          <  1:5180585/93‑1 (MQ=255)
                                                tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTcc                                         <  1:8447024/93‑1 (MQ=255)
                                                tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTcc                                         <  1:1160270/93‑1 (MQ=255)
                                                tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTcc                                         >  1:253330/1‑93 (MQ=255)
                                                tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTcc                                         <  2:2969506/93‑1 (MQ=255)
                                                tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTcc                                         <  1:6503318/93‑1 (MQ=255)
                                                 catTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCa                                        <  2:1638442/93‑1 (MQ=255)
                                                 catTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCa                                        <  2:5287914/93‑1 (MQ=255)
                                                   ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGANTNNGGCGCAGGGCGGNTTCAAgn                                      >  1:2432481/1‑92 (MQ=255)
                                                   ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAgg                                      >  1:100272/1‑93 (MQ=255)
                                                   ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAgg                                      >  2:239034/1‑93 (MQ=255)
                                                   ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAgg                                      <  2:6257560/93‑1 (MQ=255)
                                                   ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAgc                                      >  1:76891/1‑92 (MQ=255)
                                                    tGGTCGTGACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGc                                     <  1:5090111/93‑1 (MQ=255)
                                                         gTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATa                                <  2:412255/93‑1 (MQ=255)
                                                          ttACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATAc                               <  1:621165/93‑1 (MQ=255)
                                                          ttACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATAc                               <  1:904936/93‑1 (MQ=255)
                                                               acGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATAccgccg                          <  2:6823871/93‑1 (MQ=255)
                                                                cgcgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGt                         <  2:357919/93‑1 (MQ=255)
                                                                 gcgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGtt                        >  1:485182/1‑93 (MQ=255)
                                                                 gcgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGtt                        <  1:7327092/93‑1 (MQ=255)
                                                                 gcgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGtt                        <  1:2176175/93‑1 (MQ=255)
                                                                 gcgAGGGACCGCGATAGCCGTGGGGGTCGCGTAGAAAAATCTTATGACCTGTTGGCTCTGGCGCAGGGCGATTTCCAGGCCGATACCGCCGtt                        <  2:8606672/93‑1 (MQ=255)
                                                                  cgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTg                       <  1:2692803/93‑1 (MQ=255)
                                                                  cgATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTg                       <  2:1805416/93‑1 (MQ=255)
                                                                   gATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGc                      >  2:3918933/1‑93 (MQ=255)
                                                                      ggACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTgg                   <  2:3213404/93‑1 (MQ=255)
                                                                        aCCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGtt                 <  2:1303983/93‑1 (MQ=255)
                                                                         ccGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGttt                >  2:6724368/1‑93 (MQ=255)
                                                                         ccGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGttt                <  1:6743994/93‑1 (MQ=255)
                                                                            cgATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCa             <  1:3305249/93‑1 (MQ=255)
                                                                               tAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgc          >  1:944147/1‑93 (MQ=255)
                                                                               tAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgc          >  1:8122569/1‑93 (MQ=255)
                                                                               tAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgc          >  2:6911991/1‑93 (MQ=255)
                                                                               tAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgc          <  2:2759847/93‑1 (MQ=255)
                                                                               tAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgc          <  2:42844/93‑1 (MQ=255)
                                                                                aaCCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgct         <  2:754926/93‑1 (MQ=255)
                                                                                aaCCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgct         <  1:7565356/93‑1 (MQ=255)
                                                                                 aCCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctg        >  2:7664896/1‑93 (MQ=255)
                                                                                  ccGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGGGCAGGGCGAGTTCCATGCCGATACAGCCGTTGCTGGTTTGCAGcctgc       >  2:6518684/1‑93 (MQ=255)
                                                                                  ccGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctgc       >  2:2586546/1‑93 (MQ=255)
                                                                                   cGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGCGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctgtt      >  1:2954738/1‑91 (MQ=255)
                                                                                    gTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCtt     >  2:3439319/1‑93 (MQ=255)
                                                                                     ttGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTa    <  1:6791281/93‑1 (MQ=255)
                                                                                     ttGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTa    <  1:5634863/93‑1 (MQ=255)
                                                                                     ttGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTa    <  2:175303/93‑1 (MQ=255)
                                                                                     ttGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTa    >  2:2222141/1‑93 (MQ=255)
                                                                                      tGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAt   <  1:7129788/93‑1 (MQ=255)
                                                                                      tGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAt   >  1:1104366/1‑93 (MQ=255)
                                                                                          |                                                                                         
AATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATG  >  NC_000913/3783389‑3783568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTC  >  NC_000913/3783386‑3783571
                                                                                             |                                                                                            
AAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATTACCGTTGGGG                                                                                              >  SRR4302541.8597302/1‑94 (MQ=60)
AAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGG                                                                                              <  SRR4302541.6524940/94‑1 (MQ=60)
AAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGG                                                                                              >  SRR4302541.126364/1‑94 (MQ=60)
 AAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGT                                                                                             <  SRR4302541.8077141/94‑1 (MQ=60)
 AAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGT                                                                                             >  SRR4302541.8018622/1‑94 (MQ=60)
   AATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTGCGCGATGGGCCGCGATAACCGTTGGGGTCG                                                                                           <  SRR4302541.7236507/94‑1 (MQ=60)
   AATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCG                                                                                           <  SRR4302541.3833941/94‑1 (MQ=60)
   AATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCG                                                                                           <  SRR4302541.6960180/94‑1 (MQ=60)
    ATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGC                                                                                          >  SRR4302541.7852231/1‑94 (MQ=60)
    ATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGC                                                                                          <  SRR4302541.6800867/94‑1 (MQ=60)
    ATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGC                                                                                          >  SRR4302541.942269/1‑94 (MQ=60)
     ATCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCG                                                                                         <  SRR4302541.57906/94‑1 (MQ=60)
      TCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGT                                                                                        <  SRR4302541.1230876/94‑1 (MQ=60)
      TCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGT                                                                                        <  SRR4302541.7660260/94‑1 (MQ=60)
       CGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTA                                                                                       <  SRR4302541.6853930/94‑1 (MQ=60)
       CGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTA                                                                                       <  SRR4302541.6821748/94‑1 (MQ=60)
        GAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAG                                                                                      >  SRR4302541.4607265/1‑94 (MQ=60)
         AGGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGA                                                                                     >  SRR4302541.4650703/1‑94 (MQ=60)
         AAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGA                                                                                     <  SRR4302541.1711778/94‑1 (MQ=60)
          AGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAA                                                                                    <  SRR4302541.3555644/94‑1 (MQ=60)
           GAAAAATTTGCCGCGCTGGGCAAATGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAA                                                                                   <  SRR4302541.5327781/94‑1 (MQ=60)
           GAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAA                                                                                   <  SRR4302541.3434037/94‑1 (MQ=60)
           GAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAA                                                                                   >  SRR4302541.1049059/1‑94 (MQ=60)
            AAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAA                                                                                  <  SRR4302541.2517135/94‑1 (MQ=60)
            AAAAAGTTGCCGCGCTGGGCAAACGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAA                                                                                  <  SRR4302541.8406751/94‑1 (MQ=60)
              AAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAG                                                                                >  SRR4302541.5306058/1‑94 (MQ=60)
              AAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAG                                                                                <  SRR4302541.4543924/94‑1 (MQ=60)
              AAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAG                                                                                <  SRR4302541.7164138/94‑1 (MQ=60)
                ATTTGCCGGCGTGGGCAAAGGCCGGGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCT                                                                              <  SRR4302541.7563324/94‑1 (MQ=60)
                ATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCT                                                                              <  SRR4302541.7256535/94‑1 (MQ=60)
                ATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCT                                                                              >  SRR4302541.8108019/1‑94 (MQ=60)
                 TTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTT                                                                             <  SRR4302541.7818279/94‑1 (MQ=60)
                 TTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTT                                                                             <  SRR4302541.5888775/94‑1 (MQ=60)
                  TTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTA                                                                            >  SRR4302541.2051441/1‑94 (MQ=60)
                   TGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTAT                                                                           <  SRR4302541.4105567/94‑1 (MQ=60)
                   TGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTAT                                                                           <  SRR4302541.7702649/94‑1 (MQ=60)
                   TGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTAT                                                                           <  SRR4302541.6793528/94‑1 (MQ=60)
                   TGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTAT                                                                           <  SRR4302541.6793278/94‑1 (MQ=60)
                    GCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATG                                                                          >  SRR4302541.2833300/1‑94 (MQ=60)
                    GCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATG                                                                          >  SRR4302541.2975479/1‑94 (MQ=60)
                     CCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGA                                                                         >  SRR4302541.2052841/1‑94 (MQ=60)
                      CGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAC                                                                        <  SRR4302541.3209863/94‑1 (MQ=60)
                      CGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAC                                                                        <  SRR4302541.112460/94‑1 (MQ=60)
                      CGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGAC                                                                        >  SRR4302541.1881409/1‑94 (MQ=60)
                       GCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACC                                                                       <  SRR4302541.5158367/94‑1 (MQ=60)
                       GCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACC                                                                       <  SRR4302541.3335662/94‑1 (MQ=60)
                       GCGCTGGGCAAAAGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACC                                                                       <  SRR4302541.2154362/94‑1 (MQ=60)
                        CGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCT                                                                      >  SRR4302541.5598262/1‑94 (MQ=60)
                        CGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCT                                                                      <  SRR4302541.5294221/94‑1 (MQ=60)
                        CGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCT                                                                      >  SRR4302541.7817458/1‑94 (MQ=60)
                        CGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCT                                                                      >  SRR4302541.931005/1‑94 (MQ=60)
                        CGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCG                                                                      >  SRR4302541.494024/1‑94 (MQ=60)
                         GCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTG                                                                     <  SRR4302541.3881158/94‑1 (MQ=60)
                         GCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTG                                                                     <  SRR4302541.3663964/94‑1 (MQ=60)
                         GCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTG                                                                     <  SRR4302541.3760633/94‑1 (MQ=60)
                         GCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTG                                                                     <  SRR4302541.8336543/94‑1 (MQ=60)
                          CTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTGGTTATTACGGGATGAACCGCGATAACCGTTGGGGCGGCGTAAAAAAAGCTTATGACCTGT                                                                    >  SRR4302541.3386399/1‑94 (MQ=60)
                          CTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGC                                                                    >  SRR4302541.8711890/1‑94 (MQ=60)
                           TGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCT                                                                   >  SRR4302541.4483748/1‑94 (MQ=60)
                           TGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCT                                                                   >  SRR4302541.5077926/1‑94 (MQ=60)
                           TGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCT                                                                   >  SRR4302541.5060796/1‑94 (MQ=60)
                           TGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCT                                                                   >  SRR4302541.6466804/1‑94 (MQ=60)
                             GGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGTGGTCGCGTAGAAAAAGCTTATGACCTGCTGA                                                                 >  SRR4302541.5106637/1‑94 (MQ=60)
                             GGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGA                                                                 <  SRR4302541.134596/94‑1 (MQ=60)
                               CAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACT                                                               <  SRR4302541.8798230/94‑1 (MQ=60)
                               CAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACT                                                               >  SRR4302541.4021539/1‑94 (MQ=60)
                                AAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTC                                                              >  SRR4302541.512144/1‑94 (MQ=60)
                                 AAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCT                                                             <  SRR4302541.747085/94‑1 (MQ=60)
                                  AGTCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATATCCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTG                                                            <  SRR4302541.4735353/94‑1 (MQ=60)
                                  AGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTG                                                            <  SRR4302541.1785881/94‑1 (MQ=60)
                                  AGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTG                                                            <  SRR4302541.4417638/94‑1 (MQ=60)
                                    GCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGC                                                          <  SRR4302541.6961902/94‑1 (MQ=60)
                                    GCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGC                                                          <  SRR4302541.6961901/94‑1 (MQ=60)
                                      CGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGC                                                        >  SRR4302541.1602122/1‑94 (MQ=60)
                                      CGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGC                                                        >  SRR4302541.2151317/1‑94 (MQ=60)
                                       GCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCA                                                       >  SRR4302541.430230/1‑94 (MQ=60)
                                         GTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGG                                                     >  SRR4302541.8458795/1‑94 (MQ=60)
                                         GTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGG                                                     >  SRR4302541.4934096/1‑94 (MQ=60)
                                          TAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGG                                                    <  SRR4302541.5745533/94‑1 (MQ=60)
                                            GCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCG                                                  <  SRR4302541.4748062/94‑1 (MQ=60)
                                            GCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCG                                                  <  SRR4302541.7761312/94‑1 (MQ=60)
                                             CGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGA                                                 >  SRR4302541.7220567/1‑94 (MQ=60)
                                             CGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGA                                                 >  SRR4302541.176743/1‑94 (MQ=60)
                                             CGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGA                                                 >  SRR4302541.8222924/1‑94 (MQ=60)
                                             CGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGA                                                 >  SRR4302541.8285525/1‑94 (MQ=60)
                                              GTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGTGTCGCGCAGAAAAAGCTTATGACTTGCTGACTCTGGCGCcgttcgag                                                >  SRR4302541.1975587/1‑86 (MQ=60)
                                              GTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAG                                                >  SRR4302541.3038038/1‑94 (MQ=60)
                                              GTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAG                                                >  SRR4302541.3990831/1‑94 (MQ=60)
                                               gtCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCCGGCGCAGGGCGGGT                                               >  SRR4302541.1771470/3‑94 (MQ=60)
                                               TCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGT                                               <  SRR4302541.1955202/94‑1 (MQ=60)
                                                CCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATaatgtcaagatcggaagagcggttcagca                                              >  SRR4302541.4041783/1‑65 (MQ=60)
                                                CCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTT                                              >  SRR4302541.8607648/1‑94 (MQ=60)
                                                CCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTT                                              >  SRR4302541.2605911/1‑94 (MQ=60)
                                                 CATCATTGGTCGTTACTACGCGATGGCCCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTC                                             <  SRR4302541.7350345/94‑1 (MQ=60)
                                                 CATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTC                                             >  SRR4302541.6020600/1‑94 (MQ=60)
                                                 CATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTC                                             <  SRR4302541.3097442/94‑1 (MQ=60)
                                                 CATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTC                                             >  SRR4302541.7816934/1‑94 (MQ=60)
                                                 CATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTC                                             >  SRR4302541.4098409/1‑94 (MQ=60)
                                                  ATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCC                                            <  SRR4302541.5233883/94‑1 (MQ=60)
                                                  ATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCC                                            >  SRR4302541.255374/1‑94 (MQ=60)
                                                  ATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCC                                            <  SRR4302541.3211159/94‑1 (MQ=60)
                                                  ATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCC                                            >  SRR4302541.5513426/1‑94 (MQ=60)
                                                  ATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGGAGAAAAAGCTTATGCCCTGCTGACGCTGGCGCAGTGCGAGTTCA                                            >  SRR4302541.255375/1‑94 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.1171402/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           >  SRR4302541.215305/1‑94 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.1171403/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.7149915/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.8538222/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.6801362/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.6569650/94‑1 (MQ=60)
                                                   TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCA                                           <  SRR4302541.4367975/94‑1 (MQ=60)
                                                    CATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAG                                          <  SRR4302541.7298557/94‑1 (MQ=60)
                                                    CATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAG                                          <  SRR4302541.3179614/94‑1 (MQ=60)
                                                    CATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAG                                          >  SRR4302541.2628367/1‑94 (MQ=60)
                                                    CATTGGTCGTTACTACACGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTAAGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAG                                          <  SRR4302541.6076782/94‑1 (MQ=60)
                                                     ATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGANTNNGGCGCAGGGCGgnttcaagn                                         >  SRR4302541.2456560/1‑85 (MQ=60)
                                                     ATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGG                                         <  SRR4302541.5608032/94‑1 (MQ=60)
                                                     ATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGG                                         <  SRR4302541.7066662/94‑1 (MQ=60)
                                                     ATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGG                                         >  SRR4302541.101122/1‑94 (MQ=60)
                                                     ATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGC                                         >  SRR4302541.77550/1‑94 (MQ=60)
                                                       TGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCC                                       <  SRR4302541.6607221/94‑1 (MQ=60)
                                                       TGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCC                                       <  SRR4302541.757321/94‑1 (MQ=60)
                                                       TGGTCGTGACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCC                                       <  SRR4302541.5142395/94‑1 (MQ=60)
                                                        GGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCG                                      <  SRR4302541.7723786/94‑1 (MQ=60)
                                                         GTCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGA                                     <  SRR4302541.8823892/94‑1 (MQ=60)
                                                          TCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGAT                                    >  SRR4302541.2517722/1‑94 (MQ=60)
                                                          TCGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGAT                                    <  SRR4302541.5219836/94‑1 (MQ=60)
                                                           CGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATA                                   >  SRR4302541.5139915/1‑94 (MQ=60)
                                                           CGTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGACGATC                                   >  SRR4302541.5674029/1‑94 (MQ=60)
                                                            GTTCCTACGCGATGGAGGGGGATAGCCGTTGGGGTGGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATAC                                  <  SRR4302541.3327550/94‑1 (MQ=60)
                                                            GTTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATAC                                  <  SRR4302541.1199367/94‑1 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 <  SRR4302541.460067/94‑1 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 >  SRR4302541.8473421/1‑94 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 <  SRR4302541.626997/94‑1 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 <  SRR4302541.546370/94‑1 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 <  SRR4302541.3096288/94‑1 (MQ=60)
                                                             TTACTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACC                                 <  SRR4302541.913332/94‑1 (MQ=60)
                                                                CTACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCC                              <  SRR4302541.6284856/94‑1 (MQ=60)
                                                                 TACGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGCCCGATCACGCCG                             >  SRR4302541.6795149/1‑94 (MQ=60)
                                                                   CGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTT                           <  SRR4302541.5839789/94‑1 (MQ=60)
                                                                   CGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTT                           >  SRR4302541.3941826/1‑94 (MQ=60)
                                                                   CGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTT                           <  SRR4302541.4783327/94‑1 (MQ=60)
                                                                   CGCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTT                           >  SRR4302541.489780/1‑94 (MQ=60)
                                                                    GCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTG                          <  SRR4302541.2197201/94‑1 (MQ=60)
                                                                    GCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTG                          <  SRR4302541.2197202/94‑1 (MQ=60)
                                                                    GCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTG                          <  SRR4302541.7405332/94‑1 (MQ=60)
                                                                    GCGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTG                          <  SRR4302541.1056495/94‑1 (MQ=60)
                                                                    GCGATGGACCGCGATAACCGTTGGGGCCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTG                          >  SRR4302541.7361095/1‑94 (MQ=60)
                                                                     CGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGC                         <  SRR4302541.2719557/94‑1 (MQ=60)
                                                                     CGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGC                         <  SRR4302541.2979691/94‑1 (MQ=60)
                                                                     CGATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGC                         >  SRR4302541.5125125/1‑94 (MQ=60)
                                                                      GATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATCCCGGCGTTGCG                        >  SRR4302541.5090763/1‑94 (MQ=60)
                                                                      GATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCT                        <  SRR4302541.3111551/94‑1 (MQ=60)
                                                                      GATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCT                        <  SRR4302541.6868476/94‑1 (MQ=60)
                                                                       ATGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTG                       <  SRR4302541.4796383/94‑1 (MQ=60)
                                                                        TGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGG                      <  SRR4302541.4936143/94‑1 (MQ=60)
                                                                        TGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGG                      >  SRR4302541.2370354/1‑94 (MQ=60)
                                                                        TGGACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGG                      <  SRR4302541.7653132/94‑1 (MQ=60)
                                                                          GACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTT                    >  SRR4302541.8600459/1‑94 (MQ=60)
                                                                          GACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTT                    >  SRR4302541.1151041/1‑94 (MQ=60)
                                                                           GCCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTT                   <  SRR4302541.7647677/94‑1 (MQ=60)
                                                                           ACCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTT                   <  SRR4302541.6229103/94‑1 (MQ=60)
                                                                            CCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTG                  <  SRR4302541.6816045/94‑1 (MQ=60)
                                                                            CCGCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTCGCGCAGGGCGAGcttcatgccgatacctccgctacttatgtc                  >  SRR4302541.8785714/1‑64 (MQ=60)
                                                                            CCGCGATAACCGTGGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTG                  <  SRR4302541.2294064/94‑1 (MQ=60)
                                                                              GCGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCA                <  SRR4302541.2019390/94‑1 (MQ=60)
                                                                              GCGATAACCGTTGGGGTCACGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCA                <  SRR4302541.5244187/94‑1 (MQ=60)
                                                                               CGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAG               <  SRR4302541.3338461/94‑1 (MQ=60)
                                                                               CGATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAG               <  SRR4302541.4654103/94‑1 (MQ=60)
                                                                                 ATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGC             >  SRR4302541.953134/1‑94 (MQ=60)
                                                                                 ATAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGC             >  SRR4302541.8211522/1‑94 (MQ=60)
                                                                                  TAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCT            <  SRR4302541.1447233/94‑1 (MQ=60)
                                                                                  TAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCT            <  SRR4302541.2977508/94‑1 (MQ=60)
                                                                                  TAACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCT            >  SRR4302541.3019660/1‑94 (MQ=60)
                                                                                   AACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTG           <  SRR4302541.2794907/94‑1 (MQ=60)
                                                                                   AACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTG           <  SRR4302541.7646205/94‑1 (MQ=60)
                                                                                    ACCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGC          <  SRR4302541.90329/94‑1 (MQ=60)
                                                                                     CCGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGCGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGTT         >  SRR4302541.2984445/1‑94 (MQ=60)
                                                                                      CGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTT        >  SRR4302541.2834192/1‑94 (MQ=60)
                                                                                      CGTTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTT        <  SRR4302541.5566519/94‑1 (MQ=60)
                                                                                        TTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAT      >  SRR4302541.792588/1‑94 (MQ=60)
                                                                                        TTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAT      <  SRR4302541.4387983/94‑1 (MQ=60)
                                                                                        TTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAT      <  SRR4302541.5692484/94‑1 (MQ=60)
                                                                                        TTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAT      >  SRR4302541.1114716/1‑94 (MQ=60)
                                                                                        TTGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAT      <  SRR4302541.6863905/94‑1 (MQ=60)
                                                                                         TGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATG     <  SRR4302541.7205752/94‑1 (MQ=60)
                                                                                         TGGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACAGCCGTTGCTGGTTTGCAGGCTGCTTATG     >  SRR4302541.8880472/1‑94 (MQ=60)
                                                                                          GGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGC    >  SRR4302541.8745703/1‑94 (MQ=60)
                                                                                          GGGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGCCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGC    <  SRR4302541.6768078/94‑1 (MQ=60)
                                                                                           GGGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCT   <  SRR4302541.3211242/94‑1 (MQ=60)
                                                                                            GGTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTC  >  SRR4302541.5532584/1‑94 (MQ=60)
                                                                                             |                                                                                            
AAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTC  >  NC_000913/3783386‑3783571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑