Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,788,398 A→G V192A (GTG→GCG)  tdh ← threonine dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,788,3980AG99.4% 1150.4 / ‑3.3 343V192A (GTG→GCG) tdhthreonine dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base G (166/174);  total (168/175)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.76e-01

Only 100 of 368 total aligned reads displayed.

TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACC  >  NC_000913/3788308‑3788487
                                                                                          |                                                                                         
tCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgcc                                                                                         <  2:3789732/93‑1 (MQ=255)
 cATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgcca                                                                                        <  1:3635806/93‑1 (MQ=255)
 cATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATcgcca                                                                                        >  2:8042237/1‑93 (MQ=255)
   ttGAGATTTTCTTTGGCGACGTTAACCGGCCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCcaca                                                                                      <  1:4919914/93‑1 (MQ=255)
    tGAGATTTTCTTTGGCGACGTTAGCCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                     <  2:2273144/93‑1 (MQ=255)
    tGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAt                                                                                     <  1:1873189/93‑1 (MQ=255)
     gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTGCGCGCCACATAAAGTCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                    >  1:2369989/1‑93 (MQ=255)
     gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                    <  2:2321201/93‑1 (MQ=255)
     gagaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                    <  1:3906689/93‑1 (MQ=255)
     gagaTTTTCTTTGGCGACGTTAACCGCACAGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAtt                                                                                    >  2:7928038/1‑93 (MQ=255)
      ataTTTTCTTTGTCGGCGTTAGCCGCACGGGTGATACCTATTTTTCGCGCCATCTTAAGGCTCTATTCGTTAACAGCAGTGTTCTCCACAtgg                                                                                   <  2:549178/91‑3 (MQ=255)
      agaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTg                                                                                   <  1:1639577/93‑1 (MQ=255)
      agaTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTg                                                                                   <  2:4527749/93‑1 (MQ=255)
        aTTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCg                                                                                 >  1:3961299/1‑93 (MQ=255)
          tttCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTg                                                                               >  2:2722550/1‑93 (MQ=255)
          tttCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTg                                                                               >  1:5467803/1‑93 (MQ=255)
            tCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTgga                                                                             >  2:2705798/1‑91 (MQ=255)
              tttGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAcc                                                                           >  2:8801536/1‑93 (MQ=255)
              tttGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAcc                                                                           >  1:2511443/1‑93 (MQ=255)
               ttGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCa                                                                          >  1:3196388/1‑93 (MQ=255)
                tGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCaa                                                                         <  2:5358004/93‑1 (MQ=255)
                  gCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACg                                                                       <  2:7424964/93‑1 (MQ=255)
                   cGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgt                                                                      <  1:697567/93‑1 (MQ=255)
                    gACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtg                                                                     >  2:6829692/1‑93 (MQ=255)
                    gACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtg                                                                     >  1:8461673/1‑93 (MQ=255)
                    gACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtg                                                                     >  1:7383626/1‑93 (MQ=255)
                    gACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACgtg                                                                     >  1:7244720/1‑93 (MQ=255)
                      cGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGGGCACCAACGTGtt                                                                   >  2:1267424/1‑93 (MQ=255)
                       gTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGttt                                                                  <  1:8233343/93‑1 (MQ=255)
                        ttAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTc                                                                 >  2:8317839/1‑93 (MQ=255)
                         tAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCg                                                                <  2:1883708/93‑1 (MQ=255)
                            ccGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCa                                                             <  2:2547173/93‑1 (MQ=255)
                            ccGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCa                                                             >  1:381932/1‑93 (MQ=255)
                            ccGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCa                                                             >  1:4637874/1‑93 (MQ=255)
                             cGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAc                                                            <  1:1789319/93‑1 (MQ=255)
                              gCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAcc                                                           >  2:6271/1‑93 (MQ=255)
                               cACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccg                                                          <  2:2125690/93‑1 (MQ=255)
                                ccGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgc                                                         <  1:7568691/92‑1 (MQ=255)
                                aCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgc                                                         <  1:4365418/93‑1 (MQ=255)
                                aCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgc                                                         <  1:4158614/93‑1 (MQ=255)
                                 cGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAccgcc                                                        <  1:7998482/93‑1 (MQ=255)
                                     tGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTg                                                    >  1:5336934/1‑93 (MQ=255)
                                      gATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGc                                                   >  1:5059528/1‑93 (MQ=255)
                                         aCCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCat                                                >  2:5327962/1‑93 (MQ=255)
                                              ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAc                                           <  1:2117733/93‑1 (MQ=255)
                                              ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCCGCCATAATAc                                           >  2:4810155/1‑93 (MQ=255)
                                               tttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAcc                                          <  1:8085691/93‑1 (MQ=255)
                                               tttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAcc                                          <  1:7078982/93‑1 (MQ=255)
                                                 tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCATTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCat                                        >  1:2847041/1‑92 (MQ=255)
                                                 tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCaa                                        <  2:7198324/93‑1 (MQ=255)
                                                 tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCaa                                        >  1:1421556/1‑93 (MQ=255)
                                                 tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCaa                                        <  1:6342539/93‑1 (MQ=255)
                                                 tACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCaa                                        <  2:874587/93‑1 (MQ=255)
                                                  aCGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAt                                       <  2:6927336/93‑1 (MQ=255)
                                                  aCGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAt                                       >  2:6681275/1‑93 (MQ=255)
                                                   cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATc                                      <  2:5843471/93‑1 (MQ=255)
                                                   cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATc                                      <  1:1367862/93‑1 (MQ=255)
                                                      gcCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCggg                                   >  1:6848866/1‑93 (MQ=255)
                                                       ccAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGc                                  >  1:1240039/1‑93 (MQ=255)
                                                        cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                 <  2:4417406/93‑1 (MQ=255)
                                                        cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                 <  2:1705178/93‑1 (MQ=255)
                                                        cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                 <  2:2053003/93‑1 (MQ=255)
                                                        cAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGcc                                 <  1:8672291/93‑1 (MQ=255)
                                                         aGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCt                                >  2:7366332/1‑93 (MQ=255)
                                                         aGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCt                                <  2:5575946/93‑1 (MQ=255)
                                                         aGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCt                                >  1:262249/1‑93 (MQ=255)
                                                         aGCCCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCt                                <  1:7503128/93‑1 (MQ=255)
                                                           cTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCCCCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGc                              <  2:6400400/93‑1 (MQ=255)
                                                            tCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCa                             <  2:3050166/93‑1 (MQ=255)
                                                            tCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCa                             >  2:8493763/1‑93 (MQ=255)
                                                             cAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAc                            <  1:1128696/93‑1 (MQ=255)
                                                               aGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCa                          >  2:4312905/1‑93 (MQ=255)
                                                                  cGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGaa                       >  2:3201948/1‑93 (MQ=255)
                                                                  cGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGaa                       >  2:6871544/1‑93 (MQ=255)
                                                                   ggTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGaaa                      <  2:5998692/93‑1 (MQ=255)
                                                                    gTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAc                     <  2:3467591/93‑1 (MQ=255)
                                                                      aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCCCCAGAAACCa                   >  1:5866838/1‑93 (MQ=255)
                                                                      aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCa                   <  2:4944779/93‑1 (MQ=255)
                                                                      aTTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCa                   >  1:6727820/1‑93 (MQ=255)
                                                                        tCGTTAGCATCAGTGATCGCCACATTGCGTGCACCAACGGGTTTCGCCACCGCCGCTGCCATAATACCAAGCGGGCCTGCACCAGAAACCAGc                 <  2:5715989/93‑1 (MQ=255)
                                                                          gTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGcac               <  1:3456524/93‑1 (MQ=255)
                                                                          gTTAACATCAGTGATCCCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGcac               <  2:4218073/93‑1 (MQ=255)
                                                                           ttAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGcaca              >  1:3295504/1‑93 (MQ=255)
                                                                            tAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAt             <  2:7011727/93‑1 (MQ=255)
                                                                             aaCATCAGTGATCGCGACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATc            <  2:4141245/93‑1 (MQ=255)
                                                                             aaCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATc            >  1:6898028/1‑93 (MQ=255)
                                                                             aaCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATc            >  1:2203477/1‑93 (MQ=255)
                                                                              aCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCt           >  2:3324466/1‑93 (MQ=255)
                                                                              aCATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCt           >  1:8785644/1‑93 (MQ=255)
                                                                               cgtCATTGATCGCCACAGTGCGTGCACCAACGTGTATCGCAACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCtt          <  2:4087602/91‑1 (MQ=255)
                                                                               cATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCtt          <  2:1089945/93‑1 (MQ=255)
                                                                               cATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCtt          <  2:7751174/93‑1 (MQ=255)
                                                                                aTCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTc         >  1:6046149/1‑93 (MQ=255)
                                                                                   aGTGATCGCCCCATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATCCCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGcc      <  2:1377831/93‑1 (MQ=255)
                                                                                    gggATCCCCCCATTGCGGGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGccc     <  2:6770682/91‑1 (MQ=255)
                                                                                     tGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCcca    >  2:3538754/1‑93 (MQ=255)
                                                                                     tGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCcca    <  1:4792949/93‑1 (MQ=255)
                                                                                      gATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCccac   <  1:1022102/93‑1 (MQ=255)
                                                                                      gATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCccac   <  1:6445052/93‑1 (MQ=255)
                                                                                       aTCGCCCCATTGCGTGCACCACCGTGTTTCCCCCCCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCccacc  <  1:6586779/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACC  >  NC_000913/3788308‑3788487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  NC_000913/3788305‑3788491
                                                                                             |                                                                                             
ACGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCG                                                                                               <  SRR4302541.48160/94‑1 (MQ=60)
ACGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCG                                                                                               >  SRR4302541.5785731/1‑94 (MQ=60)
 CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGC                                                                                              >  SRR4302541.5997594/1‑94 (MQ=60)
 CGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGC                                                                                              >  SRR4302541.5134854/1‑94 (MQ=60)
  GTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCC                                                                                             >  SRR4302541.3081030/1‑94 (MQ=60)
  GTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCC                                                                                             <  SRR4302541.5588885/94‑1 (MQ=60)
  GTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCC                                                                                             <  SRR4302541.5213993/94‑1 (MQ=60)
  GTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCC                                                                                             >  SRR4302541.1401846/1‑94 (MQ=60)
   TCATTGAGATTTTCTTTGGCGACGTTAACCGCGCGGGTGATGCCCAGTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCA                                                                                            <  SRR4302541.4958296/94‑1 (MQ=60)
   TCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCA                                                                                            <  SRR4302541.6628082/94‑1 (MQ=60)
    CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCAC                                                                                           >  SRR4302541.964826/1‑94 (MQ=60)
    CATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCAC                                                                                           <  SRR4302541.3672673/94‑1 (MQ=60)
      TTGAGATTTTCTTTGGCGACGTTAACCGGCCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         <  SRR4302541.4970117/94‑1 (MQ=60)
      TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCGCAT                                                                                         >  SRR4302541.5286752/1‑94 (MQ=60)
      TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         >  SRR4302541.4154131/1‑94 (MQ=60)
      TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         <  SRR4302541.5195183/94‑1 (MQ=60)
      TTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACAT                                                                                         <  SRR4302541.2381729/94‑1 (MQ=60)
       TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTGCGCGCCACATAAAGTCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        >  SRR4302541.2393120/1‑94 (MQ=60)
       TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        <  SRR4302541.1058922/94‑1 (MQ=60)
       TGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATT                                                                                        <  SRR4302541.1891213/94‑1 (MQ=60)
        GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTG                                                                                       >  SRR4302541.4563366/1‑94 (MQ=60)
        GAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTG                                                                                       <  SRR4302541.3945737/94‑1 (MQ=60)
         AGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGC                                                                                      <  SRR4302541.1655796/94‑1 (MQ=60)
          GATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCG                                                                                     >  SRR4302541.4000645/1‑94 (MQ=60)
           ATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGT                                                                                    >  SRR4302541.6051621/1‑94 (MQ=60)
            TTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   >  SRR4302541.5523884/1‑94 (MQ=60)
            TTTTCTGTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTG                                                                                   <  SRR4302541.8641651/94‑1 (MQ=60)
              TTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTATACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCA                                                                                 <  SRR4302541.4827651/94‑1 (MQ=60)
               TCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAC                                                                                >  SRR4302541.6073693/1‑94 (MQ=60)
               TCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCAC                                                                                <  SRR4302541.2520002/94‑1 (MQ=60)
                CTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACC                                                                               <  SRR4302541.5080784/94‑1 (MQ=60)
                CTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACC                                                                               >  SRR4302541.2536748/1‑94 (MQ=60)
                 TTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCA                                                                              >  SRR4302541.3228678/1‑94 (MQ=60)
                 TTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCA                                                                              <  SRR4302541.5073600/94‑1 (MQ=60)
                 TTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCA                                                                              <  SRR4302541.4094829/94‑1 (MQ=60)
                   TGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAAC                                                                            <  SRR4302541.1385183/94‑1 (MQ=60)
                     GCGACGTTAACCGGACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGT                                                                          <  SRR4302541.6248691/94‑1 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         >  SRR4302541.7462566/1‑94 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         >  SRR4302541.7321992/1‑94 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         <  SRR4302541.1961698/94‑1 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         >  SRR4302541.8552949/1‑94 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         <  SRR4302541.2434062/94‑1 (MQ=60)
                      CGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTG                                                                         <  SRR4302541.704124/94‑1 (MQ=60)
                       GACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGT                                                                        <  SRR4302541.761725/94‑1 (MQ=60)
                        ACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTT                                                                       >  SRR4302541.5717090/1‑94 (MQ=60)
                         CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTTCGCGCACCAACGTGTTT                                                                      >  SRR4302541.3204977/1‑94 (MQ=60)
                         CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTT                                                                      >  SRR4302541.8524534/1‑94 (MQ=60)
                         CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTT                                                                      <  SRR4302541.6963606/94‑1 (MQ=60)
                         CGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTT                                                                      <  SRR4302541.8798689/94‑1 (MQ=60)
                          GTTAACCGCACGGTTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     <  SRR4302541.6415468/94‑1 (MQ=60)
                          GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     <  SRR4302541.8323091/94‑1 (MQ=60)
                          GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     <  SRR4302541.7335586/94‑1 (MQ=60)
                          GTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTC                                                                     >  SRR4302541.6343999/1‑94 (MQ=60)
                           TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    >  SRR4302541.6507917/1‑94 (MQ=60)
                           TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302541.2975688/94‑1 (MQ=60)
                           TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302541.1623757/94‑1 (MQ=60)
                           TTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCG                                                                    <  SRR4302541.4818640/94‑1 (MQ=60)
                              ACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCA                                                                 >  SRR4302541.385451/1‑94 (MQ=60)
                              ACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCA                                                                 >  SRR4302541.4685080/1‑94 (MQ=60)
                              ACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCA                                                                 >  SRR4302541.7160719/1‑94 (MQ=60)
                               CCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCAC                                                                <  SRR4302541.724236/94‑1 (MQ=60)
                                CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               <  SRR4302541.1806704/94‑1 (MQ=60)
                                CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               <  SRR4302541.8295366/94‑1 (MQ=60)
                                CGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACC                                                               >  SRR4302541.4303446/1‑94 (MQ=60)
                                  CACGGGTGATACCCATTTTGCGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGC                                                             >  SRR4302541.2641980/1‑94 (MQ=60)
                                  CACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGC                                                             >  SRR4302541.8371443/1‑94 (MQ=60)
                                  CACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGC                                                             <  SRR4302541.3491567/94‑1 (MQ=60)
                                   CCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.7649572/94‑1 (MQ=60)
                                   ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.8791589/94‑1 (MQ=60)
                                   ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.167565/94‑1 (MQ=60)
                                   ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.4199772/94‑1 (MQ=60)
                                   ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.4409037/94‑1 (MQ=60)
                                   ACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCC                                                            <  SRR4302541.2148448/94‑1 (MQ=60)
                                    CGGGTGATACCCATTTTGCGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           >  SRR4302541.255582/1‑94 (MQ=60)
                                    CGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           <  SRR4302541.8086503/94‑1 (MQ=60)
                                    CGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           >  SRR4302541.3977939/1‑94 (MQ=60)
                                    CGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           <  SRR4302541.4472583/94‑1 (MQ=60)
                                    CGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCG                                                           >  SRR4302541.2195244/1‑94 (MQ=60)
                                      GTTGATGCCCATTTAACGCGCTGGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCT                                                         <  SRR4302541.337999/94‑1 (MQ=60)
                                      GGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCT                                                         >  SRR4302541.7603994/1‑94 (MQ=60)
                                       GTTATGCCCATGTTACGCGCCAGCTCAAGGCGGTATTCGTTAAGATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTG                                                        <  SRR4302541.1023009/94‑1 (MQ=60)
                                       GTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTG                                                        >  SRR4302541.5391817/1‑94 (MQ=60)
                                       GTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTG                                                        >  SRR4302541.3754036/1‑94 (MQ=60)
                                       GTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTG                                                        <  SRR4302541.545222/94‑1 (MQ=60)
                                       GTGATACCCATTTTACGCGCCAGCTCAAGGCGGCATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTC                                                        >  SRR4302541.7347338/1‑94 (MQ=60)
                                        TGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGC                                                       >  SRR4302541.5111563/1‑94 (MQ=60)
                                        TGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGC                                                       >  SRR4302541.2006345/1‑94 (MQ=60)
                                         GATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCC                                                      <  SRR4302541.6935975/94‑1 (MQ=60)
                                          ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302541.696066/1‑94 (MQ=60)
                                          ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302541.7272071/1‑94 (MQ=60)
                                          ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     >  SRR4302541.167629/1‑94 (MQ=60)
                                          ATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTCCACCAACGTGTTTCGCCACCGCCGCTGCCA                                                     <  SRR4302541.6661671/94‑1 (MQ=60)
                                           TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCGCCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302541.2609142/94‑1 (MQ=60)
                                           TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGGCGCTGCCAT                                                    >  SRR4302541.2282661/1‑94 (MQ=60)
                                           TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302541.6975282/94‑1 (MQ=60)
                                           TACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCAT                                                    <  SRR4302541.4923036/94‑1 (MQ=60)
                                            ACCCATTTTACGCGCCAGCTCAAGGCAGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATA                                                   >  SRR4302541.3326681/1‑94 (MQ=60)
                                             CCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAA                                                  <  SRR4302541.1903803/94‑1 (MQ=60)
                                             CCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAA                                                  >  SRR4302541.7414882/1‑94 (MQ=60)
                                             CCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAA                                                  >  SRR4302541.388202/1‑94 (MQ=60)
                                              CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAAT                                                 >  SRR4302541.1848264/1‑94 (MQ=60)
                                              CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAAT                                                 >  SRR4302541.3910778/1‑94 (MQ=60)
                                              CCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAAT                                                 >  SRR4302541.7497296/1‑94 (MQ=60)
                                               CATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATC                                                >  SRR4302541.6572005/1‑94 (MQ=60)
                                               CATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATA                                                >  SRR4302541.1875140/1‑94 (MQ=60)
                                                CTTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAC                                               <  SRR4302541.679880/94‑1 (MQ=60)
                                                ATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATAC                                               >  SRR4302541.1656951/1‑94 (MQ=60)
                                                 TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACC                                              <  SRR4302541.7854860/94‑1 (MQ=60)
                                                 TTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACC                                              <  SRR4302541.2138237/94‑1 (MQ=60)
                                                  TTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCA                                             <  SRR4302541.7154275/94‑1 (MQ=60)
                                                  TTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCA                                             <  SRR4302541.7154276/94‑1 (MQ=60)
                                                  TTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCA                                             <  SRR4302541.8174344/94‑1 (MQ=60)
                                                   TTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCATTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAT                                            >  SRR4302541.2875670/1‑94 (MQ=60)
                                                   TTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAA                                            >  SRR4302541.3439501/1‑94 (MQ=60)
                                                   TTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAA                                            >  SRR4302541.1435387/1‑94 (MQ=60)
                                                    TCCGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302541.3517210/94‑1 (MQ=60)
                                                    TACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCCCCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302541.7525193/94‑1 (MQ=60)
                                                    TACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAAT                                           <  SRR4302541.6407385/94‑1 (MQ=60)
                                                     TCGCGCCAGCTCAAGGCGGTATTCGTTAACATCGGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATC                                          <  SRR4302541.4309699/94‑1 (MQ=60)
                                                     ACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATC                                          <  SRR4302541.6972365/94‑1 (MQ=60)
                                                     ACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATC                                          <  SRR4302541.222046/94‑1 (MQ=60)
                                                      CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302541.1381332/94‑1 (MQ=60)
                                                      CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302541.159399/94‑1 (MQ=60)
                                                      CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         <  SRR4302541.8153346/94‑1 (MQ=60)
                                                      CGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCG                                         >  SRR4302541.1149421/1‑94 (MQ=60)
                                                       GCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGG                                        <  SRR4302541.4739299/94‑1 (MQ=60)
                                                       CCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGG                                        <  SRR4302541.1098010/94‑1 (MQ=60)
                                                        CGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGG                                       >  SRR4302541.6922080/1‑94 (MQ=60)
                                                         GCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGC                                      <  SRR4302541.5395087/94‑1 (MQ=60)
                                                         GCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGC                                      >  SRR4302541.1252284/1‑94 (MQ=60)
                                                         GCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGC                                      <  SRR4302541.5395086/94‑1 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     >  SRR4302541.131776/1‑94 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     <  SRR4302541.8305501/94‑1 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     >  SRR4302541.8095940/1‑94 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     >  SRR4302541.6647473/1‑94 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     >  SRR4302541.2671517/1‑94 (MQ=60)
                                                          CCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCC                                     <  SRR4302541.6747510/94‑1 (MQ=60)
                                                           CAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCT                                    <  SRR4302541.8765100/94‑1 (MQ=60)
                                                           CAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCT                                    >  SRR4302541.3752406/1‑94 (MQ=60)
                                                           CAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCT                                    >  SRR4302541.264388/1‑94 (MQ=60)
                                                           CAGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCT                                    <  SRR4302541.7654948/94‑1 (MQ=60)
                                                            AGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTG                                   >  SRR4302541.1206132/1‑94 (MQ=60)
                                                            AGCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTG                                   <  SRR4302541.3270531/94‑1 (MQ=60)
                                                            AGCCCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTG                                   <  SRR4302541.7583324/94‑1 (MQ=60)
                                                             GCTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGC                                  >  SRR4302541.8527350/1‑94 (MQ=60)
                                                             ACTCAAGGCTGTATTCGTTAACATCAGTGATCGCCACATTGCGTTCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGC                                  <  SRR4302541.8820644/94‑1 (MQ=60)
                                                              CTCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCA                                 <  SRR4302541.1294786/94‑1 (MQ=60)
                                                               TCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAC                                >  SRR4302541.3583863/1‑94 (MQ=60)
                                                               TCAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCAC                                >  SRR4302541.3982576/1‑94 (MQ=60)
                                                                CAAGGCGTTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               <  SRR4302541.6286479/94‑1 (MQ=60)
                                                                CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               <  SRR4302541.1139361/94‑1 (MQ=60)
                                                                CAAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACC                               <  SRR4302541.1139360/94‑1 (MQ=60)
                                                                 AAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCA                              >  SRR4302541.4936642/1‑94 (MQ=60)
                                                                 AAGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCA                              >  SRR4302541.8588559/1‑94 (MQ=60)
                                                                  AGGGGGTATTCGGTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             <  SRR4302541.2409231/94‑1 (MQ=60)
                                                                  AGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCCCCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             <  SRR4302541.3720638/94‑1 (MQ=60)
                                                                  AGGCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAG                             <  SRR4302541.5796871/94‑1 (MQ=60)
                                                                    GCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAA                           >  SRR4302541.5926732/1‑94 (MQ=60)
                                                                    GCGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAA                           <  SRR4302541.3992768/94‑1 (MQ=60)
                                                                     CGGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGACA                          >  SRR4302541.6811995/1‑94 (MQ=60)
                                                                      GGTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAAC                         >  SRR4302541.7089553/1‑94 (MQ=60)
                                                                       GTATTCTTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        <  SRR4302541.1332926/94‑1 (MQ=60)
                                                                       GTATTCGTTATCATCAGTGATCGCCACATTGCGTGCACCAACTTGTTTCCCCCCCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        <  SRR4302541.3355166/94‑1 (MQ=60)
                                                                       GTATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACC                        >  SRR4302541.6734448/1‑94 (MQ=60)
                                                                        TATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCCCCAGAAACCA                       >  SRR4302541.5926521/1‑94 (MQ=60)
                                                                        TATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCA                       >  SRR4302541.6799623/1‑94 (MQ=60)
                                                                         ATTCGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAG                      >  SRR4302541.4107371/1‑94 (MQ=60)
                                                                            CGTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCAC                   >  SRR4302541.284216/1‑94 (MQ=60)
                                                                             GTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACA                  <  SRR4302541.5217348/94‑1 (MQ=60)
                                                                             GTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACA                  <  SRR4302541.3491059/94‑1 (MQ=60)
                                                                             GTTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACA                  >  SRR4302541.3328658/1‑94 (MQ=60)
                                                                              TTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAT                 <  SRR4302541.7626285/94‑1 (MQ=60)
                                                                              TTAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAT                 <  SRR4302541.8303418/94‑1 (MQ=60)
                                                                               TAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATC                >  SRR4302541.6971643/1‑94 (MQ=60)
                                                                               TAACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATC                >  SRR4302541.2224824/1‑94 (MQ=60)
                                                                                AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               <  SRR4302541.4471422/94‑1 (MQ=60)
                                                                                AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               <  SRR4302541.7687762/94‑1 (MQ=60)
                                                                                AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               >  SRR4302541.8879514/1‑94 (MQ=60)
                                                                                AACATCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCT               >  SRR4302541.935806/1‑94 (MQ=60)
                                                                                  CATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTC             >  SRR4302541.6107992/1‑94 (MQ=60)
                                                                                    TCAGTGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGC           <  SRR4302541.158909/94‑1 (MQ=60)
                                                                                        TGATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC       <  SRR4302541.4841853/94‑1 (MQ=60)
                                                                                        TGATCCCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC       <  SRR4302541.7026756/94‑1 (MQ=60)
                                                                                         GATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACC      <  SRR4302541.1031544/94‑1 (MQ=60)
                                                                                         GATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACC      >  SRR4302541.331376/1‑94 (MQ=60)
                                                                                         GATCGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACC      <  SRR4302541.6510739/94‑1 (MQ=60)
                                                                                          ATCGCCCCATTGCGTGCACCACCGTGTTTCCCCCCCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCA     <  SRR4302541.6654205/94‑1 (MQ=60)
                                                                                           TCGCCACATTGCGTGCCCCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAG    <  SRR4302541.6510836/94‑1 (MQ=60)
                                                                                            CGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   >  SRR4302541.3935597/1‑94 (MQ=60)
                                                                                            CGCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGA   <  SRR4302541.2108078/94‑1 (MQ=60)
                                                                                             GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  <  SRR4302541.3762113/94‑1 (MQ=60)
                                                                                             GCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  SRR4302541.2465102/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGTCATTGAGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGAT  >  NC_000913/3788305‑3788491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: