Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,840,766 |
G→A |
C243C (TGC→TGT) |
yicO ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,840,766 | 0 | G | A | 99.7%
| 1306.1
/ NA
| 365 | C243C (TGC→TGT) | yicO | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (197/167); minor base C (0/1); total (197/168) |
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 397 total aligned reads displayed.
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > NC_000913/3840676‑3840855
|
cTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCAcaacaa > 2:4279484/1‑93 (MQ=255)
cTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCAcaacaa < 2:7604343/93‑1 (MQ=255)
tCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCAcaacaaa > 2:158809/1‑92 (MQ=255)
cAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGa < 2:3150230/93‑1 (MQ=255)
aaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACg > 2:3792171/1‑93 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 1:4310797/93‑1 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 2:5311588/93‑1 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc > 2:6993537/1‑93 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc > 1:6396111/1‑93 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 2:2957315/93‑1 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac > 1:5672417/1‑93 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac > 2:8579378/1‑93 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTcac < 1:96250/93‑1 (MQ=255)
tACGTCACCAATGACGCCGCTAATATCAGGAGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac < 2:8084925/93‑1 (MQ=255)
aCTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacc > 1:5121226/1‑93 (MQ=255)
cTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacca < 1:5741636/93‑1 (MQ=255)
ttCACCAATGACGCCGCTAATTTCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcaccaa > 2:7139301/1‑92 (MQ=255)
tCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAATAAGACGTCACcaca > 2:945148/1‑93 (MQ=255)
cACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACaa > 1:2506205/1‑93 (MQ=255)
cACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACaa < 1:1985509/93‑1 (MQ=255)
aCCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAAt > 2:8534094/1‑93 (MQ=255)
ccAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATa > 2:6972305/1‑93 (MQ=255)
cAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAg > 2:5106118/1‑93 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAGCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa > 2:7494503/1‑93 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa < 2:6500503/93‑1 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa < 2:333715/93‑1 (MQ=255)
tGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaaa < 2:5948751/93‑1 (MQ=255)
tGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaaa > 2:558914/1‑93 (MQ=255)
tGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaaa > 2:388880/1‑93 (MQ=255)
gACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAc > 1:1741195/1‑93 (MQ=255)
gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc > 2:1141254/1‑93 (MQ=255)
gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc < 1:6550853/93‑1 (MQ=255)
cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc < 2:6653505/93‑1 (MQ=255)
tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg < 2:7734477/93‑1 (MQ=255)
tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg < 2:2802794/93‑1 (MQ=255)
aaTATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgc > 1:7291577/1‑93 (MQ=255)
atatCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgcg < 1:7174154/93‑1 (MQ=255)
atCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATATAAACCAGCACCGCGGc > 1:7787268/1‑93 (MQ=255)
cAGGCGGAATGGAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCAt > 2:17398/1‑93 (MQ=255)
cGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGaaa < 2:3442481/93‑1 (MQ=255)
cGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGaaa > 1:8761826/1‑93 (MQ=255)
tggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAc < 1:5269783/93‑1 (MQ=255)
ggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACg < 2:8188398/93‑1 (MQ=255)
ggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACg < 2:1186820/93‑1 (MQ=255)
ggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACg < 1:1187357/93‑1 (MQ=255)
ggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACg < 1:7054795/93‑1 (MQ=255)
ggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACg < 1:474050/93‑1 (MQ=255)
gaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt > 2:1023656/1‑93 (MQ=255)
aaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCGCAACAAGACGTCGCCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt < 1:2604926/92‑1 (MQ=255)
aatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtg > 1:3067885/1‑93 (MQ=255)
atAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtga > 1:7604872/1‑93 (MQ=255)
atAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtga > 2:6195607/1‑93 (MQ=255)
atAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtga < 1:2241338/93‑1 (MQ=255)
tAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat > 2:4540899/1‑93 (MQ=255)
tAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat < 2:195004/93‑1 (MQ=255)
tAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat > 2:1318102/1‑93 (MQ=255)
aCGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGac > 2:1375707/1‑93 (MQ=255)
aCGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGac < 1:130719/93‑1 (MQ=255)
cgccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGaca > 1:3710943/1‑93 (MQ=255)
gccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaa < 1:3915907/93‑1 (MQ=255)
ccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaac < 1:8489492/93‑1 (MQ=255)
cTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACg > 2:5812872/1‑93 (MQ=255)
cTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACg > 1:1042116/1‑93 (MQ=255)
aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGGAACGCGGCATGAAAATGAGGTAATGACAACACGGt > 1:5949075/1‑93 (MQ=255)
aaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGtt > 1:325067/1‑93 (MQ=255)
aaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTta < 2:3416312/93‑1 (MQ=255)
aaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTta < 2:3316827/93‑1 (MQ=255)
aaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTta > 2:2357730/1‑93 (MQ=255)
aTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTtat < 1:6675626/93‑1 (MQ=255)
tGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTtata < 1:726690/93‑1 (MQ=255)
gAACATCACCGAAAAATAATCCACAACAAGACGTCCCCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGCCAACACGGTTataa > 2:1792449/1‑93 (MQ=255)
gAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataa < 1:4529218/93‑1 (MQ=255)
cATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAACATGACGTGATGACAACACGGTTAtaataa > 1:161119/1‑93 (MQ=255)
cATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAtaataa > 1:3391581/1‑93 (MQ=255)
cATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAtaataa > 2:4864126/1‑93 (MQ=255)
tCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaa > 2:6066541/1‑93 (MQ=255)
cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa < 2:1240519/93‑1 (MQ=255)
cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa > 2:2628941/1‑93 (MQ=255)
cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa < 2:7883300/93‑1 (MQ=255)
aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa < 2:4713541/93‑1 (MQ=255)
aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa > 1:2369293/1‑93 (MQ=255)
ccGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAc < 2:3698583/93‑1 (MQ=255)
cGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAcc < 1:1845316/93‑1 (MQ=255)
gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc > 2:5471105/1‑93 (MQ=255)
gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc > 2:7526606/1‑93 (MQ=255)
aaaaTAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTa > 2:1090510/1‑93 (MQ=255)
aaaTAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaa < 2:2168617/93‑1 (MQ=255)
aataatCCAGAACAAGACGTCACCACAGTAGAAACCAGCACCGCGGCATGAAAATGCCGTGATGCCAACACGGTTATAATAAAAAACCCTaaa < 1:3158140/93‑1 (MQ=255)
aataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaa > 1:80682/1‑93 (MQ=255)
aataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaa > 1:3966841/1‑93 (MQ=255)
aataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaa < 2:5191415/93‑1 (MQ=255)
ataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaaa > 1:7851985/1‑93 (MQ=255)
ataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaaa < 1:6979209/93‑1 (MQ=255)
taatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGCCAACACGGTTATAATAAAAAACCCTAAAAt > 2:7266097/1‑93 (MQ=255)
taatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAt > 2:246859/1‑93 (MQ=255)
aagccACAACAAGACGTCACCATAATAGAAACCAGCCCCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATa < 1:1903536/90‑1 (MQ=255)
atCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAc < 2:4018472/93‑1 (MQ=255)
ccACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCt < 1:6155507/93‑1 (MQ=255)
ccACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCt > 1:5460929/1‑93 (MQ=255)
acaacaAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTaa < 2:6894107/93‑1 (MQ=255)
|
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > NC_000913/3840676‑3840855
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC > NC_000913/3840673‑3840859
|
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAA > SRR4302541.2840195/1‑94 (MQ=60)
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAA > SRR4302541.8414151/1‑94 (MQ=60)
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGAGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAA < SRR4302541.4243171/94‑1 (MQ=60)
CGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACA > SRR4302541.3832825/1‑94 (MQ=60)
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGCCGCCGCTAAAATGAACATCACCGAAACATAATCCACAACAA > SRR4302541.2258170/1‑94 (MQ=60)
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAA > SRR4302541.3247524/1‑94 (MQ=60)
CTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAG < SRR4302541.1677064/94‑1 (MQ=60)
TCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGA < SRR4302541.5705733/94‑1 (MQ=60)
TCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGA < SRR4302541.481916/94‑1 (MQ=60)
CAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAC > SRR4302541.5765373/1‑94 (MQ=60)
CAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAC > SRR4302541.3113331/1‑94 (MQ=60)
CAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAC < SRR4302541.7104691/94‑1 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG < SRR4302541.4115039/94‑1 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG > SRR4302541.5187111/1‑94 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG < SRR4302541.832572/94‑1 (MQ=60)
ATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTC > SRR4302541.1659948/1‑94 (MQ=60)
ATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTC > SRR4302541.6461397/1‑94 (MQ=60)
TCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCA < SRR4302541.5225346/94‑1 (MQ=60)
TCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCA < SRR4302541.4353846/94‑1 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC > SRR4302541.5730311/1‑94 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC > SRR4302541.4691516/1‑94 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC > SRR4302541.2424702/1‑94 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302541.5429179/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC > SRR4302541.7923342/1‑94 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC > SRR4302541.5790646/1‑94 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC > SRR4302541.1761958/1‑94 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302541.1754102/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC > SRR4302541.5173850/1‑94 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302541.1418363/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302541.97079/94‑1 (MQ=60)
CTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCAC < SRR4302541.5800138/94‑1 (MQ=60)
CTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCAC > SRR4302541.4930797/1‑94 (MQ=60)
TTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACA < SRR4302541.6738314/94‑1 (MQ=60)
TCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAA > SRR4302541.2531477/1‑94 (MQ=60)
CACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAAT < SRR4302541.2004705/94‑1 (MQ=60)
CCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCGCCACAATAG > SRR4302541.4472783/1‑94 (MQ=60)
CCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAG > SRR4302541.3340603/1‑94 (MQ=60)
CCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAG > SRR4302541.8611261/1‑94 (MQ=60)
AATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAA < SRR4302541.6215055/94‑1 (MQ=60)
AATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAA > SRR4302541.2593801/1‑94 (MQ=60)
TGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAC < SRR4302541.176508/94‑1 (MQ=60)
TGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAC > SRR4302541.1758201/1‑94 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC > SRR4302541.3458286/1‑94 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC < SRR4302541.4782482/94‑1 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACA > SRR4302541.3480597/1‑94 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGCCACCACAAaaaaaaca > SRR4302541.7102074/1‑86 (MQ=60)
ACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCA < SRR4302541.5226247/94‑1 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302541.1955302/1‑94 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302541.1781257/1‑94 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302541.5685381/1‑94 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302541.1267899/1‑94 (MQ=60)
CCGCTAATATAAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATTCACAACAAGACATAACCACAATAGAAACCAGAA > SRR4302541.3843787/1‑94 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC < SRR4302541.3174735/94‑1 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC > SRR4302541.122943/1‑94 (MQ=60)
GCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACC > SRR4302541.2515171/1‑94 (MQ=60)
GCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACC < SRR4302541.6617793/94‑1 (MQ=60)
GCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACC > SRR4302541.5446774/1‑94 (MQ=60)
gtaaaaataaggcgaaaggaataggccccgctaaaaataacctcccccAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCG < SRR4302541.1417910/46‑1 (MQ=60)
CTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCG < SRR4302541.8100403/94‑1 (MQ=60)
CTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGAACCG < SRR4302541.8411652/94‑1 (MQ=60)
TAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCGCCACAATAGAAACCAGCACCGC > SRR4302541.7361608/1‑94 (MQ=60)
TAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGC > SRR4302541.7369408/1‑94 (MQ=60)
AATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCG < SRR4302541.2446449/94‑1 (MQ=60)
AATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCG < SRR4302541.5967516/94‑1 (MQ=60)
AATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAAAAAGACGTCACCACAATAGAAACCAGCCCCACG > SRR4302541.2898493/1‑94 (MQ=60)
AATATCAGGCGGAATGGAATAGACGCCGCTAAAATAAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCG < SRR4302541.3355285/94‑1 (MQ=60)
ATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGG < SRR4302541.7250654/94‑1 (MQ=60)
TATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATATAAACCAGCACCGCGGC > SRR4302541.7870447/1‑94 (MQ=60)
ATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCA > SRR4302541.1995612/1‑94 (MQ=60)
CAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATG > SRR4302541.4342616/1‑94 (MQ=60)
CAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATG > SRR4302541.1932547/1‑94 (MQ=60)
CAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATG > SRR4302541.7299308/1‑94 (MQ=60)
CAGGCGGAATGGAATAGACGCCGCTAAAATGAAAATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATG < SRR4302541.1171244/94‑1 (MQ=60)
AGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGA > SRR4302541.7291385/1‑94 (MQ=60)
GGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAA < SRR4302541.6085529/94‑1 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA < SRR4302541.5582071/94‑1 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA > SRR4302541.8855541/1‑94 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA > SRR4302541.6694092/1‑94 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA > SRR4302541.8855540/1‑94 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA > SRR4302541.4783696/1‑94 (MQ=60)
GGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAT < SRR4302541.4057445/94‑1 (MQ=60)
GGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAT < SRR4302541.8040368/94‑1 (MQ=60)
GGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAT < SRR4302541.6349024/94‑1 (MQ=60)
GGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAA > SRR4302541.1898215/1‑94 (MQ=60)
GAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATG < SRR4302541.2613753/94‑1 (MQ=60)
TGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACG < SRR4302541.3254824/94‑1 (MQ=60)
TGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACG < SRR4302541.5324078/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302541.1198845/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302541.478551/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302541.7129831/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302541.1198846/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT > SRR4302541.3988962/1‑94 (MQ=60)
GGAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302541.6845380/94‑1 (MQ=60)
GAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACTAGCACCGCGGCATGAAAATGACGTG > SRR4302541.6780327/1‑94 (MQ=60)
GAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG > SRR4302541.3098997/1‑94 (MQ=60)
GAATAGACGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG > SRR4302541.7226364/1‑94 (MQ=60)
AAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCGCAACAAGACGTCGCCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG < SRR4302541.2630995/94‑1 (MQ=60)
AATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGA > SRR4302541.7686129/1‑94 (MQ=60)
ATAGGCGCCGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGAT > SRR4302541.6002417/1‑94 (MQ=60)
ATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGAT < SRR4302541.8722469/94‑1 (MQ=60)
ATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGAT < SRR4302541.2263042/94‑1 (MQ=60)
TAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATA > SRR4302541.4452347/1‑94 (MQ=60)
ACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACA < SRR4302541.131747/94‑1 (MQ=60)
ACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACA > SRR4302541.3748388/1‑94 (MQ=60)
GCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAAC < SRR4302541.3954986/94‑1 (MQ=60)
CCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACA < SRR4302541.8580974/94‑1 (MQ=60)
CCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACA < SRR4302541.2613813/94‑1 (MQ=60)
CGCTAAAACGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAATTGACGTGATGACAACAC > SRR4302541.7899325/1‑94 (MQ=60)
GCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCCCCGCGGCATGAAAATGACGTGATGACAACACG < SRR4302541.7482803/94‑1 (MQ=60)
GCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACG > SRR4302541.1051775/1‑94 (MQ=60)
GCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACG < SRR4302541.7082732/94‑1 (MQ=60)
GCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACG < SRR4302541.2127069/94‑1 (MQ=60)
CTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGG > SRR4302541.7346660/1‑94 (MQ=60)
CTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGG < SRR4302541.7779841/94‑1 (MQ=60)
CTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGG > SRR4302541.966567/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGGAACGCGGCATGAAAATGAGGTAATGACAACACGGT > SRR4302541.6009698/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT < SRR4302541.1312740/94‑1 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT > SRR4302541.7283805/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT < SRR4302541.2376382/94‑1 (MQ=60)
AAAATGAACATCACCGAAAAATAATCCACAACAAGACGTTACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTT < SRR4302541.2736394/94‑1 (MQ=60)
AAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTT < SRR4302541.776994/94‑1 (MQ=60)
AAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTT > SRR4302541.327969/1‑94 (MQ=60)
AAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTT < SRR4302541.7188803/94‑1 (MQ=60)
AAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTA < SRR4302541.1885488/94‑1 (MQ=60)
AAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTA > SRR4302541.395719/1‑94 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT < SRR4302541.6486442/94‑1 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT > SRR4302541.2272920/1‑94 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT < SRR4302541.6383431/94‑1 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT > SRR4302541.3966694/1‑94 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACACCACGGTTATA > SRR4302541.309781/1‑94 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATA < SRR4302541.2320126/94‑1 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATA < SRR4302541.6744458/94‑1 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATA < SRR4302541.6744462/94‑1 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATA > SRR4302541.1918656/1‑94 (MQ=60)
ATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATA > SRR4302541.6188499/1‑94 (MQ=60)
TGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAA < SRR4302541.733579/94‑1 (MQ=60)
GAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAAT > SRR4302541.6599600/1‑94 (MQ=60)
GAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAAT < SRR4302541.4574949/94‑1 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302541.7885132/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302541.996141/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302541.3903105/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA < SRR4302541.5363211/94‑1 (MQ=60)
ACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAACATGACGTGATGACAACACGGTTATAATAA > SRR4302541.162327/1‑94 (MQ=60)
ACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAA > SRR4302541.3425411/1‑94 (MQ=60)
ACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAA < SRR4302541.456607/94‑1 (MQ=60)
TCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAA > SRR4302541.7766086/1‑94 (MQ=60)
TCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAA > SRR4302541.8474519/1‑94 (MQ=60)
CACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAA > SRR4302541.2392419/1‑94 (MQ=60)
CACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAA > SRR4302541.3260992/1‑94 (MQ=60)
CGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCC < SRR4302541.1863170/94‑1 (MQ=60)
AAAATAATCCACAACAAGACGTCACCACAATCGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGCTATAATAAAAAACCCTAA > SRR4302541.4937718/1‑94 (MQ=60)
AAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAA > SRR4302541.81374/1‑94 (MQ=60)
AAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAA > SRR4302541.4006225/1‑94 (MQ=60)
AAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAA > SRR4302541.5774620/1‑94 (MQ=60)
AAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAA < SRR4302541.8910694/94‑1 (MQ=60)
AATAATCCAGAACAAGACGTCACCACAGTAGAAACCAGCACCGCGGCATGAAAATGCCGTGATGCCAACACGGTTATAATAAAAAACCCTAAAA < SRR4302541.3190024/94‑1 (MQ=60)
AATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAA > SRR4302541.7938178/1‑94 (MQ=60)
AATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAA > SRR4302541.3497887/1‑94 (MQ=60)
ATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAT < SRR4302541.5971622/94‑1 (MQ=60)
ATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAT < SRR4302541.865085/94‑1 (MQ=60)
ATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAT < SRR4302541.7053567/94‑1 (MQ=60)
TAATCAACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATA > SRR4302541.8109919/1‑94 (MQ=60)
AAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATA < SRR4302541.2758436/94‑1 (MQ=60)
AATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAC > SRR4302541.6691118/1‑94 (MQ=60)
AATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAC < SRR4302541.6458958/94‑1 (MQ=60)
AAGCCACAACAAGACGTCACCATAATAGAAACCAGCCCCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAC < SRR4302541.1921817/94‑1 (MQ=60)
TCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCT > SRR4302541.3306865/1‑94 (MQ=60)
TCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCT < SRR4302541.1627199/94‑1 (MQ=60)
TCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCT > SRR4302541.5516945/1‑94 (MQ=60)
CCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTA > SRR4302541.156025/1‑94 (MQ=60)
CCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTA < SRR4302541.6218405/94‑1 (MQ=60)
CACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > SRR4302541.7561774/1‑94 (MQ=60)
CACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > SRR4302541.7418283/1‑94 (MQ=60)
CACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > SRR4302541.2179606/1‑94 (MQ=60)
ACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAAC < SRR4302541.6502629/94‑1 (MQ=60)
CAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > SRR4302541.5475362/1‑94 (MQ=60)
CAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > SRR4302541.5656510/1‑94 (MQ=60)
AACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAA > SRR4302541.6627026/1‑94 (MQ=60)
AACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAA > SRR4302541.1694534/1‑94 (MQ=60)
AACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAA < SRR4302541.7605323/94‑1 (MQ=60)
ACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC < SRR4302541.7903982/94‑1 (MQ=60)
ACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC > SRR4302541.1009343/1‑94 (MQ=60)
ACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC < SRR4302541.5383092/94‑1 (MQ=60)
ACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC > SRR4302541.4478240/1‑94 (MQ=60)
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GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACAAC > NC_000913/3840673‑3840859
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
