Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,840,766 |
G→A |
C243C (TGC→TGT) |
yicO ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,840,766 | 0 | G | A | 100.0%
| 805.9
/ NA
| 206 | C243C (TGC→TGT) | yicO | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (112/94); total (112/94) |
Only 100 of 220 total aligned reads displayed.
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > NC_000913/3840676‑3840855
|
gcTCAAATCTACTTCACCAATGACGCCGCTAATTTCAGGCGGAATGGAATAGACGCCGCTAAAATGAAAATCACCGAAAAATAATCAacaaca > 2:1004450/1‑93 (MQ=255)
gcTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCacaaca > 2:1279155/1‑93 (MQ=255)
gcTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATACacaaca > 1:1552144/1‑93 (MQ=255)
cTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCAcaacaa > 1:5513789/1‑93 (MQ=255)
cAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGa < 1:2911113/93‑1 (MQ=255)
aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc > 2:4400354/1‑93 (MQ=255)
aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc > 2:5264128/1‑93 (MQ=255)
aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc > 2:3078976/1‑93 (MQ=255)
aaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACg > 1:6042676/1‑93 (MQ=255)
aTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGt < 1:4594799/93‑1 (MQ=255)
aTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGt < 2:2962002/93‑1 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 1:4558812/93‑1 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 2:1457788/93‑1 (MQ=255)
tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc < 2:2732814/93‑1 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac > 1:3854995/1‑93 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac > 2:4693738/1‑93 (MQ=255)
tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac < 1:4364856/93‑1 (MQ=255)
aCTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacc < 2:711215/93‑1 (MQ=255)
aCTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacc < 1:3473727/93‑1 (MQ=255)
cTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacca > 2:5774390/1‑93 (MQ=255)
cACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACaa < 1:141288/93‑1 (MQ=255)
aCCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAAt > 2:5065746/1‑93 (MQ=255)
ccAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATa < 2:192812/93‑1 (MQ=255)
ccAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCAAAATa > 2:1810344/1‑93 (MQ=255)
cAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAg > 1:2365910/1‑93 (MQ=255)
cAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAg > 1:187655/1‑93 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa > 2:5665145/1‑93 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa > 1:496707/1‑93 (MQ=255)
aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa > 1:1652493/1‑93 (MQ=255)
aTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaa < 1:3958948/93‑1 (MQ=255)
aTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaa > 1:4526564/1‑93 (MQ=255)
gACGCCGCTAATATCAGGCGGAATGGAATAGCCGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAc < 2:1585443/93‑1 (MQ=255)
gACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAc < 1:238041/93‑1 (MQ=255)
cgccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCa > 1:1526480/1‑93 (MQ=255)
ccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGc < 1:6432753/93‑1 (MQ=255)
ccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGc > 1:1461257/1‑93 (MQ=255)
cgcTAATATCAGGCGGAATGGAATAGACGCCGCTATAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCTGCa > 1:3457027/1‑93 (MQ=255)
cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa > 2:261366/1‑93 (MQ=255)
cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa > 1:5659514/1‑93 (MQ=255)
cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa < 2:777181/93‑1 (MQ=255)
gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc < 2:6276778/93‑1 (MQ=255)
gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc > 2:2930946/1‑93 (MQ=255)
gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc > 1:4264297/1‑93 (MQ=255)
cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc > 1:2049409/1‑93 (MQ=255)
cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc > 1:82955/1‑93 (MQ=255)
cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc < 2:1537445/93‑1 (MQ=255)
tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg > 1:5835652/1‑93 (MQ=255)
tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg > 2:6007171/1‑93 (MQ=255)
aaTATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgc > 2:6041483/1‑93 (MQ=255)
atgtCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgcg < 2:3189840/90‑1 (MQ=255)
atatCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgcg > 2:1142851/1‑93 (MQ=255)
tatCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCgg > 2:2124512/1‑93 (MQ=255)
aGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATg > 1:4148287/1‑93 (MQ=255)
gaatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAt < 2:6057801/93‑1 (MQ=255)
gaatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAAAAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGaaaaa > 2:5723808/1‑92 (MQ=255)
aatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATg > 1:6206850/1‑93 (MQ=255)
gaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt > 1:181810/1‑93 (MQ=255)
gaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt < 1:1594450/93‑1 (MQ=255)
aatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtg > 1:2427483/1‑93 (MQ=255)
tAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat > 2:1848307/1‑93 (MQ=255)
gACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgatga < 1:3059220/93‑1 (MQ=255)
gACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgatga > 2:1210253/1‑93 (MQ=255)
cgccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGaca < 1:4274913/93‑1 (MQ=255)
gccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaa > 2:2557415/1‑93 (MQ=255)
ccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaac < 1:6220472/93‑1 (MQ=255)
gcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAacac > 2:3898678/1‑93 (MQ=255)
tAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACgg > 1:127959/1‑93 (MQ=255)
tAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACgg < 1:467536/93‑1 (MQ=255)
aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt < 2:4086467/93‑1 (MQ=255)
aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt > 1:2271199/1‑93 (MQ=255)
aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt > 1:2986633/1‑93 (MQ=255)
aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt < 1:3125824/93‑1 (MQ=255)
aaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGtt < 1:2637373/93‑1 (MQ=255)
aaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGtt < 2:893530/93‑1 (MQ=255)
aaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTta < 2:3062446/93‑1 (MQ=255)
gAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCCGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataa < 2:4536706/93‑1 (MQ=255)
aaCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataat < 2:2205295/93‑1 (MQ=255)
aaCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataat < 1:2847552/93‑1 (MQ=255)
aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataata > 1:783821/1‑93 (MQ=255)
aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataata > 1:4918127/1‑93 (MQ=255)
aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACAGCGGCATGACAATGACGTGCTGACAACACGGATataata > 1:5324102/1‑93 (MQ=255)
cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa < 1:3604831/93‑1 (MQ=255)
cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa > 1:1032674/1‑93 (MQ=255)
aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa < 1:1154934/93‑1 (MQ=255)
aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa < 2:6462342/93‑1 (MQ=255)
aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa > 2:4984181/1‑93 (MQ=255)
ccGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAc < 2:1977430/93‑1 (MQ=255)
gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc > 1:5226707/1‑93 (MQ=255)
gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc > 1:18300/1‑93 (MQ=255)
aaaTACTCCCCAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaa < 1:863501/93‑1 (MQ=255)
ataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaaa < 1:128265/93‑1 (MQ=255)
taatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAt > 2:6153388/1‑93 (MQ=255)
atCCACAACAAGACGTCCCCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAc < 2:478514/93‑1 (MQ=255)
tCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAcc > 2:5538695/1‑93 (MQ=255)
tCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAcc < 2:759031/93‑1 (MQ=255)
ccACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCt < 1:1789202/93‑1 (MQ=255)
cacaACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTa < 2:2340209/93‑1 (MQ=255)
cacaACAAGACGACACCACAATAGAAACCAGCACCGAAGAATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTa < 1:5473299/93‑1 (MQ=255)
acaacaAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTaa > 1:991338/1‑93 (MQ=255)
acaacaAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTaa < 2:4801718/93‑1 (MQ=255)
|
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > NC_000913/3840676‑3840855
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > NC_000913/3840673‑3840857
|
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAA < SRR4302534.982673/94‑1 (MQ=60)
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAA > SRR4302534.2504536/1‑94 (MQ=60)
CGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATACACAACA > SRR4302534.1592802/1‑94 (MQ=60)
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAA < SRR4302534.5834115/94‑1 (MQ=60)
GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAA > SRR4302534.5662536/1‑94 (MQ=60)
CTAAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAG < SRR4302534.4586901/94‑1 (MQ=60)
TCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGA > SRR4302534.1198761/1‑94 (MQ=60)
TCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGA > SRR4302534.439686/1‑94 (MQ=60)
CAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAC < SRR4302534.2987526/94‑1 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG < SRR4302534.2468823/94‑1 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG > SRR4302534.6267389/1‑94 (MQ=60)
AAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACG > SRR4302534.6206938/1‑94 (MQ=60)
ATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTC < SRR4302534.4719506/94‑1 (MQ=60)
TCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCA < SRR4302534.4682408/94‑1 (MQ=60)
TCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCA < SRR4302534.3040750/94‑1 (MQ=60)
TCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCA > SRR4302534.3515435/1‑94 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCTGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC > SRR4302534.742962/1‑94 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC < SRR4302534.4387136/94‑1 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC > SRR4302534.3958492/1‑94 (MQ=60)
CTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCAC < SRR4302534.1871100/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302534.4482542/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302534.1463477/94‑1 (MQ=60)
TACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACC < SRR4302534.5559217/94‑1 (MQ=60)
ACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCA < SRR4302534.3567107/94‑1 (MQ=60)
ACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCA < SRR4302534.6054879/94‑1 (MQ=60)
CTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCAC < SRR4302534.3129507/94‑1 (MQ=60)
TTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACA < SRR4302534.4271718/94‑1 (MQ=60)
CACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAAT < SRR4302534.144990/94‑1 (MQ=60)
CCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAG > SRR4302534.192591/1‑94 (MQ=60)
CCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAG > SRR4302534.2428724/1‑94 (MQ=60)
ACAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAG > SRR4302534.3807395/1‑94 (MQ=60)
CAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGA > SRR4302534.4189050/1‑94 (MQ=60)
CAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGA > SRR4302534.1695560/1‑94 (MQ=60)
CAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGA > SRR4302534.509099/1‑94 (MQ=60)
AATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAA > SRR4302534.4649192/1‑94 (MQ=60)
ATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAA < SRR4302534.4064952/94‑1 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC > SRR4302534.2248406/1‑94 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC < SRR4302534.1313812/94‑1 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC < SRR4302534.244268/94‑1 (MQ=60)
GACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACC > SRR4302534.3492853/1‑94 (MQ=60)
ACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCA > SRR4302534.1566548/1‑94 (MQ=60)
CGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAG < SRR4302534.5298423/94‑1 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302534.1591483/1‑94 (MQ=60)
GCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGC > SRR4302534.1499680/1‑94 (MQ=60)
CCGCTAATATCAGGCGGAATGGAATAGACGCCGCTATAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCTGCA > SRR4302534.3549958/1‑94 (MQ=60)
CCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCA < SRR4302534.6606166/94‑1 (MQ=60)
CCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCA > SRR4302534.2429080/1‑94 (MQ=60)
CCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCA > SRR4302534.5812731/1‑94 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC < SRR4302534.4649493/94‑1 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC > SRR4302534.6465619/1‑94 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC < SRR4302534.1120046/94‑1 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC > SRR4302534.4379476/1‑94 (MQ=60)
CGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAC > SRR4302534.2276833/1‑94 (MQ=60)
GCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACC > SRR4302534.2102968/1‑94 (MQ=60)
GCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACC > SRR4302534.85176/1‑94 (MQ=60)
CTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCG < SRR4302534.292742/94‑1 (MQ=60)
CTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCG > SRR4302534.5994077/1‑94 (MQ=60)
TAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGC > SRR4302534.5694745/1‑94 (MQ=60)
ATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCA > SRR4302534.1950195/1‑94 (MQ=60)
TCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGCAAAATAATCCACAACAAGACGTCACCACAATAGATACCAGCACCGCGGgct > SRR4302534.6031805/1‑91 (MQ=60)
CAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATG > SRR4302534.4260263/1‑94 (MQ=60)
GCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAA < SRR4302534.967582/94‑1 (MQ=60)
CGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAA < SRR4302534.186331/94‑1 (MQ=60)
GGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAT > SRR4302534.701662/1‑94 (MQ=60)
GAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATG < SRR4302534.1795382/94‑1 (MQ=60)
GAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATG > SRR4302534.6375601/1‑94 (MQ=60)
GAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATG > SRR4302534.2879059/1‑94 (MQ=60)
GAATGCAATAGACGCCGCTAAAATGACCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATG < SRR4302534.2798011/94‑1 (MQ=60)
ATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAC < SRR4302534.4802556/94‑1 (MQ=60)
ATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAC < SRR4302534.1017554/94‑1 (MQ=60)
ATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGAC > SRR4302534.5977074/1‑94 (MQ=60)
TGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACG > SRR4302534.4190286/1‑94 (MQ=60)
TGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACG < SRR4302534.816411/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT < SRR4302534.6377178/94‑1 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT > SRR4302534.5441190/1‑94 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT > SRR4302534.851602/1‑94 (MQ=60)
GGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGT > SRR4302534.186590/1‑94 (MQ=60)
GAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG > SRR4302534.2492032/1‑94 (MQ=60)
GAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG > SRR4302534.4665553/1‑94 (MQ=60)
GAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTG < SRR4302534.1636131/94‑1 (MQ=60)
TAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATG > SRR4302534.1733880/1‑94 (MQ=60)
GACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGAC < SRR4302534.3139501/94‑1 (MQ=60)
ACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACA < SRR4302534.3558225/94‑1 (MQ=60)
CGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAA < SRR4302534.4390544/94‑1 (MQ=60)
CGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAA < SRR4302534.155651/94‑1 (MQ=60)
CCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACA < SRR4302534.6389430/94‑1 (MQ=60)
CTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGG < SRR4302534.2344091/94‑1 (MQ=60)
CTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGG > SRR4302534.131345/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT < SRR4302534.479326/94‑1 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT > SRR4302534.2331424/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT > SRR4302534.3064742/1‑94 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGT < SRR4302534.1596786/94‑1 (MQ=60)
TAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGCCATGAAAATGACGTGATGACAACACGGT > SRR4302534.1485899/1‑94 (MQ=60)
AAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTT < SRR4302534.3208008/94‑1 (MQ=60)
AAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTA > SRR4302534.474401/1‑94 (MQ=60)
AAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTA < SRR4302534.2707145/94‑1 (MQ=60)
AAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTA < SRR4302534.1917753/94‑1 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT < SRR4302534.4682943/94‑1 (MQ=60)
AATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTAT > SRR4302534.3621240/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302534.803374/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302534.5051420/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA > SRR4302534.2495695/1‑94 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATA < SRR4302534.2922362/94‑1 (MQ=60)
AACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACAGCGGCATGACAATGACGTGCTGACAACACGGATATAATA > SRR4302534.5467706/1‑94 (MQ=60)
ATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAA > SRR4302534.4015509/1‑94 (MQ=60)
TCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAA > SRR4302534.1059312/1‑94 (MQ=60)
CACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAA < SRR4302534.3701765/94‑1 (MQ=60)
ACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAC > SRR4302534.1694556/1‑94 (MQ=60)
ACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAC < SRR4302534.1185215/94‑1 (MQ=60)
ACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAC < SRR4302534.3178155/94‑1 (MQ=60)
CGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCC > SRR4302534.18786/1‑94 (MQ=60)
CGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCC > SRR4302534.1353027/1‑94 (MQ=60)
CGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCC > SRR4302534.5367794/1‑94 (MQ=60)
AAATACTCCCCAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAA < SRR4302534.885309/94‑1 (MQ=60)
ATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAT < SRR4302534.131660/94‑1 (MQ=60)
AATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAC > SRR4302534.5076460/1‑94 (MQ=60)
ATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACC > SRR4302534.5660007/1‑94 (MQ=60)
CCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTACAATACCTA < SRR4302534.5353524/94‑1 (MQ=60)
CCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTA < SRR4302534.1835672/94‑1 (MQ=60)
CACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA > SRR4302534.1016701/1‑94 (MQ=60)
CACAACAAGACGACACCACAATAGAAACCAGCACCGAAGAATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA < SRR4302534.5620869/94‑1 (MQ=60)
CAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > SRR4302534.2120266/1‑94 (MQ=60)
CAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > SRR4302534.5319797/1‑94 (MQ=60)
|
GCCGCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAACA > NC_000913/3840673‑3840857
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
