Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,866,718	T→C	A74A (GCA→GCG)	yidR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,866,718	0	T	C	99.7%	1251.5 / NA	370	A74A (GCA→GCG)	yidR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (201/168); total (202/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 409 total aligned reads displayed.

GTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGTGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGA  >  NC_000913/3866628‑3866807

 tCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGcgcg                                                                                        <  2:6204585/93‑1 (MQ=255)

  cGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCCGACTTCGGATGAACGGTCACCACGCCGACGTgcgcgc                                                                                       >  1:200033/1‑93 (MQ=255)

     aaTGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCt                                                                                    <  1:5717718/93‑1 (MQ=255)

      aTGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtg                                                                                   >  1:6033908/1‑93 (MQ=255)

      aTGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtg                                                                                   >  1:4943347/1‑93 (MQ=255)

      aTGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtg                                                                                   >  2:5382221/1‑93 (MQ=255)

       tGCCCTGTTTGAACAGGATTTTCCGGGCCGTAGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCCCCCtgt                                                                                  <  1:1763060/93‑1 (MQ=255)

       tGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtgt                                                                                  <  1:3339069/93‑1 (MQ=255)

        tccATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtgtg                                                                                 <  1:6429415/92‑1 (MQ=255)

        gCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtgtg                                                                                 <  2:4010743/93‑1 (MQ=255)

         ccATGTTTCATCAGGATTTTCCGTGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCtgtta                                                                                >  1:7919351/1‑91 (MQ=255)

          cATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAc                                                                               >  2:5225372/1‑93 (MQ=255)

            tGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgc                                                                             >  1:512484/1‑93 (MQ=255)

            tGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgc                                                                             >  1:1040929/1‑93 (MQ=255)

            tGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgc                                                                             >  2:3609988/1‑93 (MQ=255)

            tGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgc                                                                             >  1:5810844/1‑93 (MQ=255)

              tttCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgcgc                                                                           <  2:478232/93‑1 (MQ=255)

               ttCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAcgcgcg                                                                          >  2:8503526/1‑93 (MQ=255)

                  atcaGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgata                                                                       <  1:2598821/93‑1 (MQ=255)

                   tcaGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgatcg                                                                      >  2:1489767/1‑91 (MQ=255)

                    caGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgataga                                                                     <  2:4674872/93‑1 (MQ=255)

                     aGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGGGCGCCCTGTGGCGCGCgatagat                                                                    >  2:6178246/1‑93 (MQ=255)

                     aGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgatagat                                                                    >  2:8564428/1‑93 (MQ=255)

                     aGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgatagat                                                                    <  2:1815576/93‑1 (MQ=255)

                      ggATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCgatagata                                                                   >  2:6747380/1‑93 (MQ=255)

                        aTTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAac                                                                 <  2:8730982/93‑1 (MQ=255)

                        aTTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAac                                                                 <  1:5235367/93‑1 (MQ=255)

                          tttCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacct                                                               <  1:1106534/93‑1 (MQ=255)

                          tttCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacct                                                               >  1:4756886/1‑93 (MQ=255)

                          tttCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacct                                                               <  1:5439992/93‑1 (MQ=255)

                          tttCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacct                                                               <  1:4504295/93‑1 (MQ=255)

                           ttCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacctc                                                              <  1:4105496/93‑1 (MQ=255)

                             ccGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacctcga                                                            >  2:8293496/1‑93 (MQ=255)

                               gggCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacctcgacc                                                          >  2:2480660/1‑93 (MQ=255)

                               gggCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCCGTGACGCGCGACTGATAaactcgaac                                                          >  2:7705514/1‑91 (MQ=255)

                                ggCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacctcgacct                                                         >  2:1125280/1‑93 (MQ=255)

                                ggCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTACGCGCCCTGTGACGCGCGATAGATAacctcgacct                                                         <  1:3129592/93‑1 (MQ=255)

                                 gCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAacctcgacctc                                                        <  1:6595062/93‑1 (MQ=255)

                                   cGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGc                                                      >  2:1509706/1‑93 (MQ=255)

                                    gTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGcc                                                     >  2:1352371/1‑93 (MQ=255)

                                    gTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGcc                                                     >  2:2596312/1‑93 (MQ=255)

                                    gTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGcc                                                     >  2:3662843/1‑93 (MQ=255)

                                     tGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCg                                                    >  2:882857/1‑93 (MQ=255)

                                     tGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCg                                                    >  2:4145041/1‑93 (MQ=255)

                                     tGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCg                                                    >  1:3253490/1‑93 (MQ=255)

                                     agtaTGAAAATATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACTCGCGATAGATAACCTCGACCTCGCCg                                                    <  2:2088852/90‑1 (MQ=255)

                                       gATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGt                                                  >  2:8690473/1‑93 (MQ=255)

                                        aTGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTa                                                 >  1:1464761/1‑93 (MQ=255)

                                         tGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTAt                                                >  2:5053365/1‑93 (MQ=255)

                                         tGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTCTGTCGCGCGATAGATAACCTCGTCCTCGCCgtgag                                                >  2:316736/1‑89 (MQ=255)

                                         tGAAAACATATTTCTCTGACTTCGGATGAACGGTAAAAACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAAACTCGACCTCGCCGGTAt                                                >  1:8115203/1‑93 (MQ=255)

                                          gAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATg                                               <  2:5560982/93‑1 (MQ=255)

                                          gAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATg                                               <  1:7012501/93‑1 (MQ=255)

                                           aaaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATgg                                              >  2:2815713/1‑93 (MQ=255)

                                           aaaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATgg                                              >  1:2920906/1‑93 (MQ=255)

                                           aaaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATgg                                              >  2:3462396/1‑93 (MQ=255)

                                           aaaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATgg                                              <  2:3947053/93‑1 (MQ=255)

                                            aaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGa                                             >  1:5628860/1‑93 (MQ=255)

                                            aaaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGa                                             <  1:8013071/93‑1 (MQ=255)

                                             aaCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGat                                            <  2:7240123/93‑1 (MQ=255)

                                              aCATATTTCTCTGACTTCGGATGAACGGTCACCACGCCTCCGTGCGCGCCCTGTTACGCGCGATATATAACCTCTACTTCGCCGGGATGGata                                           >  1:6277849/1‑93 (MQ=255)

                                               cATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGatat                                          >  2:103901/1‑93 (MQ=255)

                                               cATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGatat                                          >  1:6708808/1‑93 (MQ=255)

                                               cATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGatat                                          <  2:4504158/93‑1 (MQ=255)

                                                atatTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTNGACCTCGCCGGTATGGATAtt                                         >  1:6863167/1‑93 (MQ=255)

                                                 tatTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGTGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTc                                        >  2:6591535/1‑93 (MQ=255)

                                                   tttCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTcac                                      <  1:2662157/93‑1 (MQ=255)

                                                     tctcTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCacac                                    <  2:5522706/93‑1 (MQ=255)

                                                       tctGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGc                                  <  2:4179632/93‑1 (MQ=255)

                                                        ctGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCt                                 <  1:1894908/93‑1 (MQ=255)

                                                         tGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTc                                >  1:4232609/1‑93 (MQ=255)

                                                            cTTCGGATGAACGGTCACCACGCCGACGTGCGAGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGAGATTCACACGCttcat                             >  1:3489470/1‑89 (MQ=255)

                                                             ttCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATg                            >  2:2653433/1‑93 (MQ=255)

                                                                ggATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtc                         <  2:6899953/93‑1 (MQ=255)

                                                                ggATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtc                         >  1:8737044/1‑93 (MQ=255)

                                                                 gATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtct                        <  2:808344/93‑1 (MQ=255)

                                                                 gATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtct                        >  1:2533457/1‑93 (MQ=255)

                                                                 gATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtct                        >  1:933926/1‑93 (MQ=255)

                                                                 gATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGtct                        >  1:816394/1‑93 (MQ=255)

                                                                   tGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCg                      <  1:161313/93‑1 (MQ=255)

                                                                   tGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCg                      >  1:7671985/1‑93 (MQ=255)

                                                                   tGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCg                      >  2:878577/1‑93 (MQ=255)

                                                                       cGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGcccg                  >  2:6427234/1‑91 (MQ=255)

                                                                         gTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTa                >  1:8554095/1‑93 (MQ=255)

                                                                         gTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTa                <  2:4373580/93‑1 (MQ=255)

                                                                            accacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAac             <  1:8602491/93‑1 (MQ=255)

                                                                            accacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAac             >  1:8079296/1‑93 (MQ=255)

                                                                            accacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAac             >  1:4328248/1‑93 (MQ=255)

                                                                            accacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAac             >  2:740315/1‑93 (MQ=255)

                                                                            accacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAac             <  2:8351171/93‑1 (MQ=255)

                                                                             ccacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAGCCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacg            <  2:6815902/93‑1 (MQ=255)

                                                                              cacGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacga           <  2:7869456/93‑1 (MQ=255)

                                                                               ccGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacgac          <  1:3975351/92‑1 (MQ=255)

                                                                               acGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacgac          >  1:2447309/1‑93 (MQ=255)

                                                                               acGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacgac          >  2:5715768/1‑93 (MQ=255)

                                                                                cGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAacgacg         <  1:2247784/93‑1 (MQ=255)

                                                                                  ccGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTACACGAcgcg       >  2:1212784/1‑93 (MQ=255)

                                                                                     aCGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACATGCTCAATGGTCTCGCCGGTAAACGACGCGCCa    >  1:7257146/1‑93 (MQ=255)

                                                                                       gtgcGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGa  >  2:7157852/1‑93 (MQ=255)

                                                                                       gtgcGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGa  <  1:3827111/93‑1 (MQ=255)

GTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGTGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGA  >  NC_000913/3866628‑3866807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.

GAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGTGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGGA  >  NC_000913/3866625‑3866811

GAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGC                                                                                               <  SRR4302541.8059821/94‑1 (MQ=60)

GAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGC                                                                                               <  SRR4302541.902309/94‑1 (MQ=60)

GAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGC                                                                                               >  SRR4302541.5202788/1‑94 (MQ=60)

  AGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGC                                                                                             <  SRR4302541.2511624/94‑1 (MQ=60)

  AGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGC                                                                                             <  SRR4302541.2466277/94‑1 (MQ=60)

  AGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGC                                                                                             <  SRR4302541.363230/94‑1 (MQ=60)

  AGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGC                                                                                             >  SRR4302541.386585/1‑94 (MQ=60)

    TCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCCGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGC                                                                                           >  SRR4302541.201540/1‑94 (MQ=60)

      GTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCC                                                                                         >  SRR4302541.2522326/1‑94 (MQ=60)

      GTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCC                                                                                         >  SRR4302541.870491/1‑94 (MQ=60)

       TAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCTCCACGCCGACGTGCGCGCCCT                                                                                        <  SRR4302541.2293393/94‑1 (MQ=60)

       TAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGAGCCCT                                                                                        >  SRR4302541.4558525/1‑94 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTG                                                                                       >  SRR4302541.7122189/1‑94 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTG                                                                                       >  SRR4302541.4993830/1‑94 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTG                                                                                       <  SRR4302541.6628915/94‑1 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTG                                                                                       >  SRR4302541.6095690/1‑94 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTG                                                                                       <  SRR4302541.5776014/94‑1 (MQ=60)

        AATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACCTGCGCGCCCTG                                                                                       >  SRR4302541.2941912/1‑94 (MQ=60)

         ATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGT                                                                                      <  SRR4302541.7757897/94‑1 (MQ=60)

          TGCCCTGTTTGAACAGGATTTTCCGGGCCGTAGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCCCCCTGTG                                                                                     <  SRR4302541.1780221/94‑1 (MQ=60)

          TGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTG                                                                                     <  SRR4302541.3372476/94‑1 (MQ=60)

           TCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGA                                                                                    <  SRR4302541.6494960/94‑1 (MQ=60)

           GCCATGTTTCATCAGGATTTTCCGTGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTTA                                                                                    >  SRR4302541.8006506/1‑94 (MQ=60)

           GCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGC                                                                                    >  SRR4302541.1108213/1‑94 (MQ=60)

            CCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGAC                                                                                   >  SRR4302541.2684803/1‑94 (MQ=60)

             CATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACG                                                                                  >  SRR4302541.5915787/1‑94 (MQ=60)

              ATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGC                                                                                 >  SRR4302541.7938638/1‑94 (MQ=60)

              ATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGC                                                                                 >  SRR4302541.517275/1‑94 (MQ=60)

              ATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGC                                                                                 >  SRR4302541.1050575/1‑94 (MQ=60)

              ATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGC                                                                                 <  SRR4302541.65352/94‑1 (MQ=60)

              ATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGC                                                                                 >  SRR4302541.5869881/1‑94 (MQ=60)

                GTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGcccctg                                                                               >  SRR4302541.6382982/1‑88 (MQ=60)

                GTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGC                                                                               <  SRR4302541.5308185/94‑1 (MQ=60)

                 TTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCG                                                                              <  SRR4302541.2378985/94‑1 (MQ=60)

                 TTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCG                                                                              <  SRR4302541.6154172/94‑1 (MQ=60)

                 GTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCG                                                                              <  SRR4302541.8226420/94‑1 (MQ=60)

                  TTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGA                                                                             >  SRR4302541.4706527/1‑94 (MQ=60)

                   TCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGAT                                                                            >  SRR4302541.2088859/1‑94 (MQ=60)

                    CATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATA                                                                           <  SRR4302541.3364302/94‑1 (MQ=60)

                     ATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAG                                                                          <  SRR4302541.2624847/94‑1 (MQ=60)

                     ATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAG                                                                          <  SRR4302541.4307492/94‑1 (MQ=60)

                       CAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGAT                                                                        >  SRR4302541.399046/1‑94 (MQ=60)

                       CAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGAT                                                                        >  SRR4302541.961679/1‑94 (MQ=60)

                       CAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGAT                                                                        <  SRR4302541.5741084/94‑1 (MQ=60)

                       CAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGAT                                                                        <  SRR4302541.1563814/94‑1 (MQ=60)

                        AGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATA                                                                       >  SRR4302541.465494/1‑94 (MQ=60)

                        AGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATA                                                                       >  SRR4302541.6176317/1‑94 (MQ=60)

                          GATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAAC                                                                     <  SRR4302541.5214213/94‑1 (MQ=60)

                           ATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACC                                                                    <  SRR4302541.5289306/94‑1 (MQ=60)

                           ATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAGATAACC                                                                    <  SRR4302541.1374939/94‑1 (MQ=60)

                            TTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCT                                                                   >  SRR4302541.4805476/1‑94 (MQ=60)

                             TTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTC                                                                  <  SRR4302541.5495811/94‑1 (MQ=60)

                             TTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTC                                                                  <  SRR4302541.2997945/94‑1 (MQ=60)

                             TTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTC                                                                  <  SRR4302541.1116910/94‑1 (MQ=60)

                              TTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCG                                                                 <  SRR4302541.4146028/94‑1 (MQ=60)

                              TTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCG                                                                 <  SRR4302541.1634622/94‑1 (MQ=60)

                               TCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGC                                                                >  SRR4302541.2654987/1‑94 (MQ=60)

                               TCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGA                                                                <  SRR4302541.2166545/94‑1 (MQ=60)

                                 CGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACC                                                              <  SRR4302541.6693426/94‑1 (MQ=60)

                                 CGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACC                                                              >  SRR4302541.5230889/1‑94 (MQ=60)

                                  GGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCT                                                             >  SRR4302541.2667318/1‑94 (MQ=60)

                                  GGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCT                                                             >  SRR4302541.8666604/1‑94 (MQ=60)

                                  GGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCT                                                             >  SRR4302541.6746153/1‑94 (MQ=60)

                                   GGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTC                                                            <  SRR4302541.3707477/94‑1 (MQ=60)

                                   GGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTC                                                            >  SRR4302541.7435142/1‑94 (MQ=60)

                                   GGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTACGCGCCCTGTGACGCGCGATAGATAACCTCGACCTC                                                            <  SRR4302541.3161226/94‑1 (MQ=60)

                                     CCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGC                                                          <  SRR4302541.6609800/94‑1 (MQ=60)

                                      CGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCC                                                         <  SRR4302541.8459115/94‑1 (MQ=60)

                                       GTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCG                                                        <  SRR4302541.201/94‑1 (MQ=60)

                                       GTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCG                                                        >  SRR4302541.3286338/1‑94 (MQ=60)

                                       GTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCG                                                        >  SRR4302541.2528225/1‑94 (MQ=60)

                                        TGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCAGG                                                       >  SRR4302541.159177/1‑94 (MQ=60)

                                         GGATGAAAACATAGTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGT                                                      <  SRR4302541.8362300/94‑1 (MQ=60)

                                          GATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTA                                                     >  SRR4302541.1479106/1‑94 (MQ=60)

                                          GATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTA                                                     >  SRR4302541.910402/1‑94 (MQ=60)

                                          GATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTCTGACTCGCGATAGATAACCTCGACCTCGCCGGTA                                                     >  SRR4302541.910403/1‑94 (MQ=60)

                                           ATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTAT                                                    <  SRR4302541.8202470/94‑1 (MQ=60)

                                           ATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTAT                                                    <  SRR4302541.8016822/94‑1 (MQ=60)

                                           ATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTAT                                                    <  SRR4302541.4396777/94‑1 (MQ=60)

                                           ATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTAT                                                    >  SRR4302541.115678/1‑94 (MQ=60)

                                           ATGAAAACATATTTCTCTGACTTCGGATGAACGGTAAAAACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAAACTCGACCTCGCCGGTAT                                                    >  SRR4302541.8204107/1‑94 (MQ=60)

                                            TGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATG                                                   >  SRR4302541.5279594/1‑94 (MQ=60)

                                             GAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGG                                                  >  SRR4302541.3468085/1‑94 (MQ=60)

                                             GAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGG                                                  >  SRR4302541.4474557/1‑94 (MQ=60)

                                             GAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGG                                                  <  SRR4302541.7087087/94‑1 (MQ=60)

                                              AAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGA                                                 >  SRR4302541.1064660/1‑94 (MQ=60)

                                              AAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGA                                                 >  SRR4302541.5686443/1‑94 (MQ=60)

                                              AAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGA                                                 >  SRR4302541.3264932/1‑94 (MQ=60)

                                              AAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGA                                                 <  SRR4302541.3694666/94‑1 (MQ=60)

                                               AAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGAT                                                <  SRR4302541.8101191/94‑1 (MQ=60)

                                               AAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGAT                                                >  SRR4302541.7325462/1‑94 (MQ=60)

                                               AAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGAT                                                >  SRR4302541.4716504/1‑94 (MQ=60)

                                                AACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCTCCGTGCGCGCCCTGTTACGCGCGATATATAACCTCTACTTCGCCGGGATGGATA                                               >  SRR4302541.6341958/1‑94 (MQ=60)

                                                AACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATA                                               >  SRR4302541.8646084/1‑94 (MQ=60)

                                                AACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATA                                               >  SRR4302541.4249125/1‑94 (MQ=60)

                                                 ACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATAT                                              >  SRR4302541.6779786/1‑94 (MQ=60)

                                                  CATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTNGACCTCGCCGGTATGGATATT                                             >  SRR4302541.6936493/1‑94 (MQ=60)

                                                   ATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTC                                            >  SRR4302541.8227599/1‑94 (MQ=60)

                                                   ATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGACAAATAACCTCGACCCCCCCGCTATGGGTATTC                                            >  SRR4302541.6306755/1‑94 (MQ=60)

                                                      TTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACA                                         >  SRR4302541.4904173/1‑94 (MQ=60)

                                                      TTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACA                                         <  SRR4302541.2688628/94‑1 (MQ=60)

                                                      TTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTAACA                                         >  SRR4302541.5854444/1‑94 (MQ=60)

                                                       tgcgcgGACTTCGGATGAAAGGTCACCACGCCGATGTGCGCGCCCTGTGACGAGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACAC                                        <  SRR4302541.5698884/88‑1 (MQ=60)

                                                       TTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACAC                                        <  SRR4302541.5698883/94‑1 (MQ=60)

                                                       TTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGCATGGATATTCACAC                                        >  SRR4302541.5141779/1‑94 (MQ=60)

                                                        TCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACG                                       <  SRR4302541.7085703/94‑1 (MQ=60)

                                                        TCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACG                                       <  SRR4302541.369809/94‑1 (MQ=60)

                                                        TCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACC                                       >  SRR4302541.1640341/1‑94 (MQ=60)

                                                          TCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCT                                     >  SRR4302541.495485/1‑94 (MQ=60)

                                                          TCTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCT                                     >  SRR4302541.5662631/1‑94 (MQ=60)

                                                           CTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTC                                    >  SRR4302541.804865/1‑94 (MQ=60)

                                                           CTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTC                                    >  SRR4302541.4274788/1‑94 (MQ=60)

                                                           CTGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGCATGGATATTCACACGCTC                                    >  SRR4302541.5821001/1‑94 (MQ=60)

                                                           CTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTC                                    <  SRR4302541.1913094/94‑1 (MQ=60)

                                                           CTGACTTCGGATGAACGGTCACCACGCCGACGCGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTC                                    >  SRR4302541.3022052/1‑94 (MQ=60)

                                                            TGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCA                                   >  SRR4302541.7444174/1‑94 (MQ=60)

                                                            TGACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCA                                   >  SRR4302541.515768/1‑94 (MQ=60)

                                                             GACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAA                                  >  SRR4302541.8199423/1‑94 (MQ=60)

                                                             GACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAA                                  >  SRR4302541.8899522/1‑94 (MQ=60)

                                                             GACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAA                                  >  SRR4302541.3436691/1‑94 (MQ=60)

                                                              ACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAAT                                 >  SRR4302541.848107/1‑94 (MQ=60)

                                                              ACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAAT                                 <  SRR4302541.4072115/94‑1 (MQ=60)

                                                              ACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAAT                                 >  SRR4302541.5534724/1‑94 (MQ=60)

                                                              ACTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGCATGGATATTCACACGCTCAAT                                 >  SRR4302541.3524414/1‑94 (MQ=60)

                                                              ACTTCGGATGAACGGTCACCACGCCGACGTGCGAGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGAGATTCACACGCTtcat                                 >  SRR4302541.3524415/1‑90 (MQ=60)

                                                               CTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATG                                <  SRR4302541.8654329/94‑1 (MQ=60)

                                                               CTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATG                                >  SRR4302541.6463610/1‑94 (MQ=60)

                                                               CTTCGGATGAACGGTCACCACGCCGACGTGCGCGCCATGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATG                                <  SRR4302541.6709894/94‑1 (MQ=60)

                                                                TTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGG                               >  SRR4302541.6831653/1‑94 (MQ=60)

                                                                TTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGG                               <  SRR4302541.4474308/94‑1 (MQ=60)

                                                                TTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCCCGCCGGTATGGATATTAACACGCTCCATGG                               >  SRR4302541.142575/1‑94 (MQ=60)

                                                                GTCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGG                               <  SRR4302541.6437788/94‑1 (MQ=60)

                                                                 TCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGT                              <  SRR4302541.4285524/94‑1 (MQ=60)

                                                                 TCGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGT                              <  SRR4302541.1969118/94‑1 (MQ=60)

                                                                  CGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTC                             <  SRR4302541.3968929/94‑1 (MQ=60)

                                                                  CGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTC                             >  SRR4302541.8830579/1‑94 (MQ=60)

                                                                  CGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTC                             <  SRR4302541.1932799/94‑1 (MQ=60)

                                                                  CGGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTC                             <  SRR4302541.1086794/94‑1 (MQ=60)

                                                                   GGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCT                            >  SRR4302541.823838/1‑94 (MQ=60)

                                                                   GGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCT                            >  SRR4302541.2558906/1‑94 (MQ=60)

                                                                   GGATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCT                            >  SRR4302541.942758/1‑94 (MQ=60)

                                                                    GATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTC                           <  SRR4302541.8829863/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCTCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          <  SRR4302541.2906851/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTTGGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          <  SRR4302541.4358580/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          >  SRR4302541.7753568/1‑94 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          <  SRR4302541.562135/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          <  SRR4302541.2906850/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCG                          <  SRR4302541.1738410/94‑1 (MQ=60)

                                                                     ATGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTAAATGGTCTCC                          >  SRR4302541.3318732/1‑94 (MQ=60)

                                                                      TGAACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGC                         <  SRR4302541.162524/94‑1 (MQ=60)

                                                                       GAACGGTCACCACGCCGACGTGGGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATCGTCTCGCC                        >  SRR4302541.3168537/1‑94 (MQ=60)

                                                                        AACGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCG                       <  SRR4302541.2579517/94‑1 (MQ=60)

                                                                         ACGGTCACCACGCCGACGTGCGCGCACTGTGACGCGCGATAGATACCCTCGCCCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGG                      <  SRR4302541.4111738/94‑1 (MQ=60)

                                                                          CGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGca                     >  SRR4302541.3105321/1‑92 (MQ=60)

                                                                          CGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGT                     <  SRR4302541.6491756/94‑1 (MQ=60)

                                                                          CGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGT                     <  SRR4302541.6826349/94‑1 (MQ=60)

                                                                          CGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGT                     <  SRR4302541.8115991/94‑1 (MQ=60)

                                                                          CGGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGT                     >  SRR4302541.4958212/1‑94 (MQ=60)

                                                                           GGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTA                    >  SRR4302541.1859684/1‑94 (MQ=60)

                                                                           GGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTA                    >  SRR4302541.5703577/1‑94 (MQ=60)

                                                                           GGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTA                    <  SRR4302541.6511440/94‑1 (MQ=60)

                                                                           GGTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTA                    >  SRR4302541.8646020/1‑94 (MQ=60)

                                                                            GTCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAA                   >  SRR4302541.997192/1‑94 (MQ=60)

                                                                             TCACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAA                  <  SRR4302541.5463787/94‑1 (MQ=60)

                                                                              TACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAAG                 >  SRR4302541.7373812/1‑94 (MQ=60)

                                                                              CACCACGCCGACGTTCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAAC                 <  SRR4302541.2197190/94‑1 (MQ=60)

                                                                              CACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAAC                 >  SRR4302541.6799953/1‑94 (MQ=60)

                                                                              CACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAAC                 >  SRR4302541.8167927/1‑94 (MQ=60)

                                                                              CACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAAC                 >  SRR4302541.4371462/1‑94 (MQ=60)

                                                                               CCCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACG                <  SRR4302541.3245729/94‑1 (MQ=60)

                                                                               ACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACG                <  SRR4302541.6028038/94‑1 (MQ=60)

                                                                               ACCACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACG                <  SRR4302541.8694776/94‑1 (MQ=60)

                                                                                 CACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGAC              >  SRR4302541.2471619/1‑94 (MQ=60)

                                                                                 CACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGAC              >  SRR4302541.8234632/1‑94 (MQ=60)

                                                                                  CCGCCGACGTGCGCGCCCTGTGACGCGCGATAGATACCCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.817761/94‑1 (MQ=60)

                                                                                  CCGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.8053434/94‑1 (MQ=60)

                                                                                  CCGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.4014793/94‑1 (MQ=60)

                                                                                  CCGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.7231916/94‑1 (MQ=60)

                                                                                  CCGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.3179628/94‑1 (MQ=60)

                                                                                  ACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.4032663/94‑1 (MQ=60)

                                                                                  ACGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACG             <  SRR4302541.4246695/94‑1 (MQ=60)

                                                                                   CGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGC            <  SRR4302541.2269520/94‑1 (MQ=60)

                                                                                   CGCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGC            <  SRR4302541.1392912/94‑1 (MQ=60)

                                                                                    GCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCG           >  SRR4302541.2570794/1‑94 (MQ=60)

                                                                                    GCCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCG           <  SRR4302541.1851763/94‑1 (MQ=60)

                                                                                     CCGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGC          >  SRR4302541.6060738/1‑94 (MQ=60)

                                                                                      CGACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCC         <  SRR4302541.8270850/94‑1 (MQ=60)

                                                                                       GACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACATGCTCAATGGTCTCGCCGGTAAACGACGCGCCA        >  SRR4302541.7334557/1‑94 (MQ=60)

                                                                                       GACGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCA        >  SRR4302541.2754334/1‑94 (MQ=60)

                                                                                         CGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGA      >  SRR4302541.2485492/1‑94 (MQ=60)

                                                                                         CGTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGA      <  SRR4302541.693999/94‑1 (MQ=60)

                                                                                          GTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAA     >  SRR4302541.843286/1‑94 (MQ=60)

                                                                                          GTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAA     <  SRR4302541.3865667/94‑1 (MQ=60)

                                                                                          GTGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAA     <  SRR4302541.8156880/94‑1 (MQ=60)

                                                                                           TGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAG    >  SRR4302541.1748506/1‑94 (MQ=60)

                                                                                           TGCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAG    <  SRR4302541.4976648/94‑1 (MQ=60)

                                                                                            GCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGG   >  SRR4302541.4011435/1‑94 (MQ=60)

                                                                                            GCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGG   >  SRR4302541.7018494/1‑94 (MQ=60)

                                                                                            GCGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGG   >  SRR4302541.2690662/1‑94 (MQ=60)

                                                                                             CGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGGA  >  SRR4302541.907429/1‑94 (MQ=60)

GAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAACATATTTCTCTGACTTCGGATGAACGGTCACCACGCCGACGTGTGCGCCCTGTGACGCGCGATAGATAACCTCGACCTCGCCGGTATGGATATTCACACGCTCAATGGTCTCGCCGGTAAACGACGCGCCAGAAGGA  >  NC_000913/3866625‑3866811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`