Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,887,809 A→G intergenic (+35/‑56) b3708 → / → tnaB tryptophanase/low affinity tryptophan permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,887,8090AG99.7% 1290.0 / NA 375intergenic (+35/‑56)b3708/tnaBtryptophanase/low affinity tryptophan permease
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (187/186);  minor base C (1/0);  total (189/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 380 total aligned reads displayed.

TTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT  >  NC_000913/3887719‑3887898
                                                                                          |                                                                                         
 tacgtacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGctc                                                                                        >  2:2874423/1‑93 (MQ=255)
  acgtacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGctct                                                                                       >  1:1546432/1‑93 (MQ=255)
   cgtacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGctctc                                                                                      <  1:822445/93‑1 (MQ=255)
    gtacgAACCGAAAGTATTGCGTCACTTCACCGCAATGCTTAAAGAAGTTTAATTAATTCTACAGAGTGGCTATAAGGATGTTAGCCGctctct                                                                                     <  2:4056882/93‑1 (MQ=255)
     tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCtt                                                                                    <  1:3345407/93‑1 (MQ=255)
     tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCtt                                                                                    >  2:7637344/1‑93 (MQ=255)
     tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCtt                                                                                    >  1:6819775/1‑93 (MQ=255)
     tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCtt                                                                                    <  2:6772008/93‑1 (MQ=255)
         aaCCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCTCTCTCTTAccc                                                                                >  2:3038530/1‑93 (MQ=255)
         aaCCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTAccc                                                                                >  2:4761193/1‑93 (MQ=255)
           ccGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTa                                                                              <  1:7535446/93‑1 (MQ=255)
           ccGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTa                                                                              <  1:3441653/93‑1 (MQ=255)
            cGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTAc                                                                             >  1:7813313/1‑93 (MQ=255)
            cGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTAc                                                                             <  1:6433871/93‑1 (MQ=255)
            cGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACACTAc                                                                             <  2:6963312/93‑1 (MQ=255)
             gAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACa                                                                            <  2:1832025/93‑1 (MQ=255)
              aaaGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAt                                                                           >  1:1043275/1‑93 (MQ=255)
              aaaGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAt                                                                           >  1:1922866/1‑93 (MQ=255)
               aaGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATc                                                                          >  2:6118221/1‑93 (MQ=255)
                aGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATcc                                                                         >  1:1442562/1‑93 (MQ=255)
                    ttGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCaa                                                                     >  1:5591391/1‑93 (MQ=255)
                     tGCGTCCCTTCACCGCAAAACTTAAATAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAAt                                                                    <  1:3044086/93‑1 (MQ=255)
                      gCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATa                                                                   <  1:2289261/93‑1 (MQ=255)
                        gTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAAc                                                                 >  2:1943177/1‑93 (MQ=255)
                        gTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAAc                                                                 >  2:2177984/1‑93 (MQ=255)
                         tCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACa                                                                >  1:3185534/1‑93 (MQ=255)
                          cACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaa                                                               >  1:8461027/1‑93 (MQ=255)
                          cACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaa                                                               >  1:7220106/1‑93 (MQ=255)
                           aCTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaaa                                                              >  2:3504391/1‑93 (MQ=255)
                           aCTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaaa                                                              <  2:722484/93‑1 (MQ=255)
                            cTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaaaa                                                             >  2:2075392/1‑93 (MQ=255)
                            cTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACaaaa                                                             <  2:4472967/93‑1 (MQ=255)
                             ttCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACacaaa                                                            >  2:360925/1‑93 (MQ=255)
                              tCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAAt                                                           >  1:3307463/1‑93 (MQ=255)
                               cACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATa                                                          >  2:3855217/1‑93 (MQ=255)
                               cACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATa                                                          >  1:2612932/1‑93 (MQ=255)
                               cACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATa                                                          <  1:6995585/93‑1 (MQ=255)
                               cACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATa                                                          <  1:2464697/93‑1 (MQ=255)
                               cACCGCAAAACTTAAAGAAGTTTAATGAATACTACAGAGTGGCTATAATGATGTTAGCCGCTCGCTTACCCTACATCCTCAATAACAAAAATa                                                          <  1:1167637/93‑1 (MQ=255)
                                 ccGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGc                                                        >  1:6558129/1‑93 (MQ=255)
                                 ccGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGc                                                        <  1:4087847/93‑1 (MQ=255)
                                   gCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCt                                                      <  2:4932270/93‑1 (MQ=255)
                                   gCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCt                                                      <  2:4182297/93‑1 (MQ=255)
                                     aaaaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTc                                                    >  2:1307611/1‑93 (MQ=255)
                                     aaaaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTc                                                    >  1:5348516/1‑93 (MQ=255)
                                      aaaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTcc                                                   >  1:3551176/1‑93 (MQ=255)
                                       aaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCct                                                  <  1:7648952/93‑1 (MQ=255)
                                       aaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCct                                                  >  1:4953333/1‑93 (MQ=255)
                                        aCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctc                                                 >  2:1223374/1‑93 (MQ=255)
                                         cTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctct                                                <  2:6386883/93‑1 (MQ=255)
                                          ttAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTa                                               <  1:1280871/93‑1 (MQ=255)
                                          ttAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTa                                               >  1:4644352/1‑93 (MQ=255)
                                           tAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaa                                              >  1:8154687/1‑93 (MQ=255)
                                           tAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaa                                              <  2:2475177/93‑1 (MQ=255)
                                           tAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaa                                              <  2:5482985/93‑1 (MQ=255)
                                              agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAgg                                           >  2:6229496/1‑93 (MQ=255)
                                              agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAgg                                           <  1:4445455/93‑1 (MQ=255)
                                               gaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGt                                          <  1:5490451/93‑1 (MQ=255)
                                               gaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGt                                          <  1:8754270/93‑1 (MQ=255)
                                               gaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGt                                          <  2:5799704/93‑1 (MQ=255)
                                                aagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTg                                         <  1:4263995/93‑1 (MQ=255)
                                                 agTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTATAGCTgg                                        >  1:5921519/1‑93 (MQ=255)
                                                  gTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGc                                       >  1:1883204/1‑93 (MQ=255)
                                                    ttaattaaTACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcat                                     <  2:5070238/93‑1 (MQ=255)
                                                     taattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatc                                    <  2:4614012/93‑1 (MQ=255)
                                                     taattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatc                                    >  2:4002704/1‑93 (MQ=255)
                                                      aattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatca                                   <  1:6778740/93‑1 (MQ=255)
                                                      aattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatca                                   <  2:3709023/93‑1 (MQ=255)
                                                      aattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatca                                   <  1:2694026/93‑1 (MQ=255)
                                                      aattaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatca                                   <  1:3907935/93‑1 (MQ=255)
                                                       attaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatcat                                  >  2:3366177/1‑93 (MQ=255)
                                                       attaatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatcat                                  >  2:4364031/1‑93 (MQ=255)
                                                          aatACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGAc                               <  1:1597838/93‑1 (MQ=255)
                                                            tactacAGTGTTGCTATAAGGATGTTAGCCGCTCTCTTATCCTACATTCTCAATAACAAAAATAGCCTTCCTCTTTAGGTGTCATCTTTACTg                             >  2:8053951/1‑93 (MQ=255)
                                                              ctacAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAt                           >  1:1746439/1‑93 (MQ=255)
                                                              ctacAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAt                           >  2:6541734/1‑93 (MQ=255)
                                                              ctacAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAt                           <  1:1249366/93‑1 (MQ=255)
                                                               tacAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATc                          <  1:2050444/93‑1 (MQ=255)
                                                                acAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCa                         <  2:146903/93‑1 (MQ=255)
                                                                acAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCa                         <  1:5186646/93‑1 (MQ=255)
                                                                   gagTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGc                      >  2:8802345/1‑93 (MQ=255)
                                                                   gagTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGc                      >  1:8631822/1‑93 (MQ=255)
                                                                    agTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCt                     <  2:3376510/93‑1 (MQ=255)
                                                                     gTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                    >  2:7808492/1‑93 (MQ=255)
                                                                     gTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                    <  1:7885412/93‑1 (MQ=255)
                                                                     gTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                    <  1:417925/93‑1 (MQ=255)
                                                                      tGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGa                   <  1:5777213/93‑1 (MQ=255)
                                                                         cTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGaaaa                >  2:7486482/1‑93 (MQ=255)
                                                                          tataAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGaaaaa               >  2:7023988/1‑93 (MQ=255)
                                                                          tataAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTAGCATCATGACTGATCAAGCTGaaaaa               >  1:976326/1‑93 (MQ=255)
                                                                           ataAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGaaaaaa              >  2:2666039/1‑93 (MQ=255)
                                                                           ataAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGaaaaaa              <  2:7734466/93‑1 (MQ=255)
                                                                             aaGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAg            <  2:5926633/93‑1 (MQ=255)
                                                                                gATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAc         <  1:1083447/93‑1 (MQ=255)
                                                                                 aTGTTAGCCGCCCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAct        <  1:7420373/93‑1 (MQ=255)
                                                                                  tGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATTAAGCTGAAAAAAAGCActc       <  1:2810529/93‑1 (MQ=255)
                                                                                  tGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCActc       <  1:6112676/93‑1 (MQ=255)
                                                                                  tGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCActc       <  2:8409840/93‑1 (MQ=255)
                                                                                  tGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCActc       <  2:6286904/93‑1 (MQ=255)
                                                                                   gTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCActct      <  1:7975029/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT  >  NC_000913/3887719‑3887898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.
CCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  >  NC_000913/3887716‑3887902
                                                                                             |                                                                                             
CCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCG                                                                                               <  SRR4302541.1384479/94‑1 (MQ=60)
CCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCG                                                                                               >  SRR4302541.4712632/1‑94 (MQ=60)
CCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCG                                                                                               >  SRR4302541.7267081/1‑94 (MQ=60)
 CTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGC                                                                                              >  SRR4302541.4694785/1‑94 (MQ=60)
 CTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGC                                                                                              >  SRR4302541.3903476/1‑94 (MQ=60)
 CTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGC                                                                                              >  SRR4302541.5386229/1‑94 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.4538791/94‑1 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.5952010/94‑1 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.5716957/94‑1 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.7106992/94‑1 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.4816026/94‑1 (MQ=60)
  TTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCT                                                                                             <  SRR4302541.7304570/94‑1 (MQ=60)
    TACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCT                                                                                           >  SRR4302541.1561958/1‑94 (MQ=60)
      CGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCT                                                                                         <  SRR4302541.829929/94‑1 (MQ=60)
       GTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTT                                                                                        <  SRR4302541.2251081/94‑1 (MQ=60)
       GTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTT                                                                                        >  SRR4302541.6892754/1‑94 (MQ=60)
       GTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTT                                                                                        >  SRR4302541.1407250/1‑94 (MQ=60)
       GTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTT                                                                                        >  SRR4302541.6892753/1‑94 (MQ=60)
       GTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTT                                                                                        >  SRR4302541.4247354/1‑94 (MQ=60)
        TACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTA                                                                                       <  SRR4302541.3378853/94‑1 (MQ=60)
         ACGAACCGAAAGTATTGCGTCACTACACCGCAACACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTAC                                                                                      <  SRR4302541.7909771/94‑1 (MQ=60)
          CGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACC                                                                                     >  SRR4302541.5309175/1‑94 (MQ=60)
           GAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCC                                                                                    <  SRR4302541.3389287/94‑1 (MQ=60)
             ACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTA                                                                                  <  SRR4302541.5796972/94‑1 (MQ=60)
             ACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTA                                                                                  >  SRR4302541.8007274/1‑94 (MQ=60)
              CCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTAC                                                                                 <  SRR4302541.7615993/94‑1 (MQ=60)
              CCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTAC                                                                                 <  SRR4302541.3476044/94‑1 (MQ=60)
              CCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTAC                                                                                 >  SRR4302541.7897821/1‑94 (MQ=60)
               CGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACA                                                                                >  SRR4302541.806825/1‑94 (MQ=60)
               CGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACA                                                                                >  SRR4302541.2689979/1‑94 (MQ=60)
               CGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACA                                                                                <  SRR4302541.1907066/94‑1 (MQ=60)
               CGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACA                                                                                <  SRR4302541.6499447/94‑1 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               >  SRR4302541.1052944/1‑94 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               <  SRR4302541.7602984/94‑1 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               <  SRR4302541.7602985/94‑1 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               >  SRR4302541.1941376/1‑94 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               >  SRR4302541.1292061/1‑94 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACAT                                                                               <  SRR4302541.1856620/94‑1 (MQ=60)
                GAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCCCCCTCTTACCCTACAT                                                                               >  SRR4302541.7218514/1‑94 (MQ=60)
                  AAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCC                                                                             >  SRR4302541.1456603/1‑94 (MQ=60)
                   AGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCT                                                                            <  SRR4302541.942251/94‑1 (MQ=60)
                   AGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCT                                                                            <  SRR4302541.5573238/94‑1 (MQ=60)
                   AGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCT                                                                            <  SRR4302541.7616161/94‑1 (MQ=60)
                        TGCGTCCCTTCACCGCAAAACTTAAATAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATA                                                                       <  SRR4302541.3074864/94‑1 (MQ=60)
                        TGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATA                                                                       <  SRR4302541.3074863/94‑1 (MQ=60)
                         GCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAA                                                                      <  SRR4302541.2311427/94‑1 (MQ=60)
                         GCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAA                                                                      >  SRR4302541.3970567/1‑94 (MQ=60)
                          CGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAAC                                                                     >  SRR4302541.8853429/1‑94 (MQ=60)
                          CGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAAC                                                                     <  SRR4302541.2314463/94‑1 (MQ=60)
                           GTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACA                                                                    <  SRR4302541.3962501/94‑1 (MQ=60)
                           GTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACA                                                                    <  SRR4302541.5964914/94‑1 (MQ=60)
                           GTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACA                                                                    <  SRR4302541.1282602/94‑1 (MQ=60)
                           GTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACA                                                                    >  SRR4302541.3217711/1‑94 (MQ=60)
                            TCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAA                                                                   >  SRR4302541.8552299/1‑94 (MQ=60)
                            TCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAA                                                                   <  SRR4302541.3562328/94‑1 (MQ=60)
                            TCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAA                                                                   >  SRR4302541.7297133/1‑94 (MQ=60)
                             CACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAA                                                                  >  SRR4302541.3374506/1‑94 (MQ=60)
                             CACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAA                                                                  <  SRR4302541.8275003/94‑1 (MQ=60)
                               CTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAA                                                                >  SRR4302541.3228140/1‑94 (MQ=60)
                               ATTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTTCCCTACATCCTCAATAACAAAAA                                                                <  SRR4302541.1662810/94‑1 (MQ=60)
                                TTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAAT                                                               >  SRR4302541.3340687/1‑94 (MQ=60)
                                 TCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATA                                                              >  SRR4302541.852383/1‑94 (MQ=60)
                                 TCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATA                                                              >  SRR4302541.2639044/1‑94 (MQ=60)
                                  CACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAG                                                             <  SRR4302541.1178867/94‑1 (MQ=60)
                                  CACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAG                                                             <  SRR4302541.7070051/94‑1 (MQ=60)
                                  CACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAG                                                             <  SRR4302541.5312563/94‑1 (MQ=60)
                                  CACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAG                                                             <  SRR4302541.2489318/94‑1 (MQ=60)
                                   ACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCCATAACAAAAATCGC                                                            >  SRR4302541.3683037/1‑94 (MQ=60)
                                   ACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGC                                                            >  SRR4302541.5546097/1‑94 (MQ=60)
                                   ACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGC                                                            >  SRR4302541.6625176/1‑94 (MQ=60)
                                    CCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCC                                                           <  SRR4302541.4128201/94‑1 (MQ=60)
                                     CGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCT                                                          >  SRR4302541.1493660/1‑94 (MQ=60)
                                     CGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCT                                                          >  SRR4302541.1256877/1‑94 (MQ=60)
                                      GCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTT                                                         <  SRR4302541.8830811/94‑1 (MQ=60)
                                       CAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATTCTCAATAACAAAAATAGCCTTC                                                        >  SRR4302541.4032091/1‑94 (MQ=60)
                                       CAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTC                                                        <  SRR4302541.8251475/94‑1 (MQ=60)
                                       CAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTC                                                        >  SRR4302541.1103062/1‑94 (MQ=60)
                                       CAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTC                                                        >  SRR4302541.5403488/1‑94 (MQ=60)
                                        AAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCC                                                       >  SRR4302541.3587088/1‑94 (MQ=60)
                                        AAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCC                                                       >  SRR4302541.4344180/1‑94 (MQ=60)
                                         AAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCT                                                      >  SRR4302541.5003974/1‑94 (MQ=60)
                                          AACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTC                                                     <  SRR4302541.7730457/94‑1 (MQ=60)
                                           ACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT                                                    >  SRR4302541.2376245/1‑94 (MQ=60)
                                           ACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT                                                    <  SRR4302541.8271033/94‑1 (MQ=60)
                                           ACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT                                                    >  SRR4302541.13304/1‑94 (MQ=60)
                                            CTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTA                                                   >  SRR4302541.7896368/1‑94 (MQ=60)
                                            CTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTA                                                   >  SRR4302541.520313/1‑94 (MQ=60)
                                            CTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTA                                                   >  SRR4302541.2144856/1‑94 (MQ=60)
                                             TTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAA                                                  >  SRR4302541.8243813/1‑94 (MQ=60)
                                             TTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAA                                                  >  SRR4302541.3371216/1‑94 (MQ=60)
                                             TTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAA                                                  >  SRR4302541.3139019/1‑94 (MQ=60)
                                              TAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAA                                                 >  SRR4302541.1912852/1‑94 (MQ=60)
                                              TAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAA                                                 <  SRR4302541.3666663/94‑1 (MQ=60)
                                               AAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAG                                                >  SRR4302541.5057091/1‑94 (MQ=60)
                                               AAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAG                                                <  SRR4302541.6262523/94‑1 (MQ=60)
                                               AAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAG                                                >  SRR4302541.1068957/1‑94 (MQ=60)
                                                AAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGG                                               >  SRR4302541.748814/1‑94 (MQ=60)
                                                AAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGG                                               <  SRR4302541.8041554/94‑1 (MQ=60)
                                                 AGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGT                                              <  SRR4302541.4490158/94‑1 (MQ=60)
                                                  GAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTG                                             >  SRR4302541.2672006/1‑94 (MQ=60)
                                                  GAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTG                                             <  SRR4302541.5768363/94‑1 (MQ=60)
                                                  GAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTG                                             <  SRR4302541.5546714/94‑1 (MQ=60)
                                                  GAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTG                                             <  SRR4302541.8847917/94‑1 (MQ=60)
                                                   AAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTATAGCTGG                                            >  SRR4302541.5981812/1‑94 (MQ=60)
                                                   AAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGG                                            >  SRR4302541.5981811/1‑94 (MQ=60)
                                                   AAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGG                                            <  SRR4302541.2944043/94‑1 (MQ=60)
                                                   AAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGG                                            <  SRR4302541.4306614/94‑1 (MQ=60)
                                                   AAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGG                                            <  SRR4302541.4433830/94‑1 (MQ=60)
                                                    AGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGC                                           >  SRR4302541.2384086/1‑94 (MQ=60)
                                                    AGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGC                                           >  SRR4302541.1901294/1‑94 (MQ=60)
                                                     GTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCA                                          <  SRR4302541.8645943/94‑1 (MQ=60)
                                                     GTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCA                                          <  SRR4302541.1185778/94‑1 (MQ=60)
                                                      TTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCAT                                         <  SRR4302541.1613027/94‑1 (MQ=60)
                                                       TTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTGCATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATC                                        <  SRR4302541.8168730/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.4823156/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      >  SRR4302541.7210107/1‑94 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.272066/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.2720788/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.3595208/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.3946986/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.1572087/94‑1 (MQ=60)
                                                         AATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.6851232/94‑1 (MQ=60)
                                                         AATGAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCAT                                      <  SRR4302541.1843943/94‑1 (MQ=60)
                                                          ATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATG                                     <  SRR4302541.7378538/94‑1 (MQ=60)
                                                          ATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATG                                     >  SRR4302541.4239251/1‑94 (MQ=60)
                                                           TTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCCCTTACCCTCCATCCTCAATAACAAAAATAGCCTTCTTCTAAAGGTGGAATCATGC                                    >  SRR4302541.6261335/1‑94 (MQ=60)
                                                            TAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGAC                                   >  SRR4302541.7065020/1‑94 (MQ=60)
                                                             AATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACT                                  <  SRR4302541.1613748/94‑1 (MQ=60)
                                                             AATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACT                                  >  SRR4302541.1310470/1‑94 (MQ=60)
                                                             AATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACT                                  <  SRR4302541.8691484/94‑1 (MQ=60)
                                                             AATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACT                                  <  SRR4302541.8838253/94‑1 (MQ=60)
                                                             AATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACT                                  <  SRR4302541.4673480/94‑1 (MQ=60)
                                                              ATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTG                                 >  SRR4302541.6619583/1‑94 (MQ=60)
                                                               TACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAATGGTGGCATCATGACTGA                                >  SRR4302541.7912911/1‑94 (MQ=60)
                                                               TACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTCA                                >  SRR4302541.974673/1‑94 (MQ=60)
                                                                ACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAT                               >  SRR4302541.1763488/1‑94 (MQ=60)
                                                                ACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAT                               >  SRR4302541.6875450/1‑94 (MQ=60)
                                                                 CTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATC                              <  SRR4302541.1261756/94‑1 (MQ=60)
                                                                 CTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATC                              <  SRR4302541.8047107/94‑1 (MQ=60)
                                                                 CTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATC                              >  SRR4302541.6065377/1‑94 (MQ=60)
                                                                 CTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATC                              <  SRR4302541.3338880/94‑1 (MQ=60)
                                                                 CTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTAACCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATC                              >  SRR4302541.4539254/1‑94 (MQ=60)
                                                                  TACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCA                             <  SRR4302541.6531139/94‑1 (MQ=60)
                                                                  TACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCA                             <  SRR4302541.2070231/94‑1 (MQ=60)
                                                                  TACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCA                             <  SRR4302541.2070232/94‑1 (MQ=60)
                                                                   ACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAA                            >  SRR4302541.5000057/1‑94 (MQ=60)
                                                                   ACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAA                            <  SRR4302541.5240004/94‑1 (MQ=60)
                                                                     AGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGC                          >  SRR4302541.7721322/1‑94 (MQ=60)
                                                                     AGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGC                          >  SRR4302541.8724314/1‑94 (MQ=60)
                                                                     AGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGC                          <  SRR4302541.3174071/94‑1 (MQ=60)
                                                                       AGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTG                        >  SRR4302541.3412723/1‑94 (MQ=60)
                                                                        GTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGA                       <  SRR4302541.421806/94‑1 (MQ=60)
                                                                        GTGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGA                       <  SRR4302541.7972096/94‑1 (MQ=60)
                                                                         TGGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAA                      <  SRR4302541.5835963/94‑1 (MQ=60)
                                                                          GGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAA                     >  SRR4302541.1274950/1‑94 (MQ=60)
                                                                          GGCTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAA                     >  SRR4302541.3070229/1‑94 (MQ=60)
                                                                            CTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAA                   >  SRR4302541.3292561/1‑94 (MQ=60)
                                                                            CTATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAA                   <  SRR4302541.5696106/94‑1 (MQ=60)
                                                                             TATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAA                  >  SRR4302541.1156436/1‑94 (MQ=60)
                                                                             TATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAA                  >  SRR4302541.1601390/1‑94 (MQ=60)
                                                                              ATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAA                 >  SRR4302541.7501572/1‑94 (MQ=60)
                                                                              ATAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAA                 >  SRR4302541.6794551/1‑94 (MQ=60)
                                                                               TAAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAG                <  SRR4302541.2672551/94‑1 (MQ=60)
                                                                                AAGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGA               >  SRR4302541.1852577/1‑94 (MQ=60)
                                                                                 AGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCA              <  SRR4302541.6271149/94‑1 (MQ=60)
                                                                                 AGGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCA              <  SRR4302541.2025843/94‑1 (MQ=60)
                                                                                  GGATTTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAC             <  SRR4302541.1653255/94‑1 (MQ=60)
                                                                                  GGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAC             >  SRR4302541.6746019/1‑94 (MQ=60)
                                                                                  GGATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAC             >  SRR4302541.6746018/1‑94 (MQ=60)
                                                                                   GATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACT            <  SRR4302541.5533965/94‑1 (MQ=60)
                                                                                   GATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACT            <  SRR4302541.1093562/94‑1 (MQ=60)
                                                                                   GATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACT            <  SRR4302541.2504811/94‑1 (MQ=60)
                                                                                   GATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACT            <  SRR4302541.1093561/94‑1 (MQ=60)
                                                                                   GATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACT            <  SRR4302541.1093558/94‑1 (MQ=60)
                                                                                    ATGTTAGCCGCTCTCTTACCCTACCTCCACAATCACAAAAATAGCATTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGACAAAACGCACTC           <  SRR4302541.7893530/94‑1 (MQ=60)
                                                                                    ATGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTC           >  SRR4302541.4650061/1‑94 (MQ=60)
                                                                                    ATGTTAGCCGCCCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTC           <  SRR4302541.7499726/94‑1 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTCAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCT          >  SRR4302541.8678823/1‑94 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGCCTGATCAAGCTGAAAAAAAGCACTCT          <  SRR4302541.5562434/94‑1 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATTAAGCTGAAAAAAAGCACTCT          <  SRR4302541.2838937/94‑1 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCT          <  SRR4302541.5562433/94‑1 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCT          <  SRR4302541.4865688/94‑1 (MQ=60)
                                                                                     TGTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCT          >  SRR4302541.6400530/1‑94 (MQ=60)
                                                                                      GTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTG         >  SRR4302541.3481717/1‑94 (MQ=60)
                                                                                      GTTAGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTG         <  SRR4302541.8062893/94‑1 (MQ=60)
                                                                                         AGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT      >  SRR4302541.6965233/1‑94 (MQ=60)
                                                                                         AGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT      <  SRR4302541.4158871/94‑1 (MQ=60)
                                                                                         AGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT      <  SRR4302541.4158865/94‑1 (MQ=60)
                                                                                         AGCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCAT      >  SRR4302541.6006917/1‑94 (MQ=60)
                                                                                          GCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATT     <  SRR4302541.2577068/94‑1 (MQ=60)
                                                                                          GCCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATT     >  SRR4302541.662512/1‑94 (MQ=60)
                                                                                           CCGCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTT    >  SRR4302541.40731/1‑94 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAATCACTCTGCATTTTG  <  SRR4302541.5864636/94‑1 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  >  SRR4302541.604621/1‑94 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  <  SRR4302541.8672183/94‑1 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  <  SRR4302541.285411/94‑1 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  <  SRR4302541.8162408/94‑1 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  <  SRR4302541.3785823/94‑1 (MQ=60)
                                                                                             GCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  >  SRR4302541.2176233/1‑94 (MQ=60)
                                                                                             CCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAACCACTCTGCATTTTG  <  SRR4302541.5864635/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTG  >  NC_000913/3887716‑3887902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑