Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,893,920	C→T	G107S (GGC→AGC)	yieG ←	putative membrane/transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,893,920	0	C	T	99.7%	1280.0 / ‑6.3	360	G107S (GGC→AGC)	yieG	putative membrane/transport protein
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (192/166); total (193/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 370 total aligned reads displayed.

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

tcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCa                                                                                         >  2:4532942/1‑93 (MQ=255)

tcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCa                                                                                         >  2:686017/1‑93 (MQ=255)

 catcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCAt                                                                                        >  1:4474885/1‑93 (MQ=255)

 catcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCAt                                                                                        <  1:3265131/93‑1 (MQ=255)

  atcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATc                                                                                       >  1:488224/1‑93 (MQ=255)

  atcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATc                                                                                       <  2:4844272/93‑1 (MQ=255)

  atcCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATc                                                                                       <  1:5445785/93‑1 (MQ=255)

   tcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCg                                                                                      >  1:8264438/1‑93 (MQ=255)

   tcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCg                                                                                      >  2:7425760/1‑93 (MQ=255)

      aGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCt                                                                                   <  2:2309538/93‑1 (MQ=255)

      aGTAGCGAACGCGAAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCt                                                                                   <  2:7714054/93‑1 (MQ=255)

        tAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGt                                                                                 <  1:5577323/93‑1 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               <  1:6083068/93‑1 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               <  1:2798643/93‑1 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               >  2:6170205/1‑93 (MQ=255)

           cGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACa                                                                              >  2:7248903/1‑93 (MQ=255)

           cGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACa                                                                              >  1:6740013/1‑93 (MQ=255)

              aCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAca                                                                           >  2:7263200/1‑92 (MQ=255)

                gcgGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACaacaac                                                                         >  1:3107125/1‑93 (MQ=255)

                gcgGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGAc                                                                         >  1:6679357/1‑93 (MQ=255)

                     aaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAg                                                                    >  2:7944615/1‑93 (MQ=255)

                     aaaTCGTCAGTAACAGCAGACCTATCACGCCACATAAGATTGAGCCCATCCCGACCTGCCAAGGCAAGCTCATAGCCTGTACAACGACAAAAg                                                                    >  2:3172832/1‑93 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCgaa                                                                >  2:4079057/1‑93 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCgaa                                                                <  1:8455449/93‑1 (MQ=255)

                            cAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCgaagaa                                                             >  2:8325064/1‑93 (MQ=255)

                            cAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaagaa                                                             <  1:7935273/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAAc                                                            <  1:3640758/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAAc                                                            <  1:1246055/93‑1 (MQ=255)

                               tAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGc                                                          <  2:5532526/93‑1 (MQ=255)

                               tAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGc                                                          >  2:6227848/1‑93 (MQ=255)

                                aaCAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCa                                                         <  2:1538087/93‑1 (MQ=255)

                                aaCAGCAGACCTATCCCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGCAGAACGCa                                                         >  2:8709537/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                                                       >  2:2852803/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                                                       >  1:2460680/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       >  2:7489845/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       <  1:1545896/93‑1 (MQ=255)

                                   agcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGCACAACGACAAAAGCGAAGAACGCATTc                                                      <  1:1097350/93‑1 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCa                                                     <  2:565933/93‑1 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     <  2:7649376/93‑1 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     <  2:3402143/93‑1 (MQ=255)

                                     cagACCTAACGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAg                                                    <  2:8530038/93‑1 (MQ=255)

                                        aCCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGcc                                                 >  2:198388/1‑93 (MQ=255)

                                         ccTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGccc                                                <  2:7196386/93‑1 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCa                                               <  2:3010087/93‑1 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCa                                               <  2:1862896/93‑1 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCa                                               >  2:8449142/1‑93 (MQ=255)

                                             tCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAg                                            <  1:6800703/93‑1 (MQ=255)

                                              cgcgCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCACATAGc                                           <  2:7795408/93‑1 (MQ=255)

                                              cgcgCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGc                                           <  2:6340978/93‑1 (MQ=255)

                                              cgcgCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGc                                           <  1:8088756/93‑1 (MQ=255)

                                               gcgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGAATTAAGGCCCATACCg                                          >  2:3283900/1‑93 (MQ=38)

                                               ccgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCg                                          <  1:2342462/92‑1 (MQ=255)

                                                cgcCCCAGAAGATTGGGCCCATGCCGGGCTGCCACAGCAAGCTCATCGCCTGTACAACAACAGACGCCAAGAACGCATTCACGCCCCTAgtcg                                         >  2:7373877/1‑90 (MQ=255)

                                                cgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCgg                                         >  2:1378945/1‑93 (MQ=255)

                                                cgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCgg                                         <  1:8184093/93‑1 (MQ=255)

                                                 gcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg                                        >  1:4326595/1‑93 (MQ=255)

                                                 gcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg                                        >  1:7324050/1‑93 (MQ=255)

                                                   cccAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACACCGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTg                                      >  1:3734653/1‑93 (MQ=255)

                                                   cccAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTg                                      >  2:5972904/1‑93 (MQ=255)

                                                   cccAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTg                                      >  1:7372868/1‑93 (MQ=255)

                                                     cAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc                                    >  1:5983234/1‑93 (MQ=255)

                                                      agaagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCa                                   >  2:3610582/1‑93 (MQ=255)

                                                      agaagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCa                                   >  1:7881115/1‑93 (MQ=255)

                                                        aagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt                                 >  2:2543633/1‑93 (MQ=255)

                                                         agaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTg                                >  2:504708/1‑93 (MQ=255)

                                                          gaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc                               <  1:651907/93‑1 (MQ=255)

                                                          gaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc                               <  2:1027278/93‑1 (MQ=255)

                                                           aTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCa                              >  1:4044625/1‑93 (MQ=255)

                                                           aTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCa                              >  2:5361398/1‑93 (MQ=255)

                                                           aTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCa                              <  2:5226941/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  1:1000408/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  2:1293916/93‑1 (MQ=255)

                                                                  ccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa                       >  2:366097/1‑93 (MQ=255)

                                                                   cATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg                      <  1:269295/93‑1 (MQ=255)

                                                                    aTCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAgg                     >  1:1724580/1‑93 (MQ=255)

                                                                     tCCCGACCTGCCACGGCAAGCTCATCGCCTGTATAACGACAAAAGCGAAGAACGCATTTAGGCCAATAGCGGGAGCCAGAGCAACTGGCAGGt                    >  2:4620971/1‑93 (MQ=255)

                                                                     tCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGt                    >  1:8729868/1‑93 (MQ=255)

                                                                     tCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGt                    <  1:3778715/93‑1 (MQ=255)

                                                                     acccGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGt                    <  1:2072159/92‑1 (MQ=255)

                                                                       ccGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTa                  <  1:4638208/93‑1 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 <  1:2001718/93‑1 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                >  2:4311821/1‑93 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                >  1:8561460/1‑93 (MQ=255)

                                                                         caCCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                <  1:7301709/92‑1 (MQ=255)

                                                                          cccTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCa               <  1:7234699/92‑1 (MQ=255)

                                                                          aCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCa               <  2:4428081/93‑1 (MQ=255)

                                                                            cggCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCaaa             >  2:6100575/3‑93 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            >  1:1375573/1‑93 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            >  1:5329760/1‑93 (MQ=255)

                                                                               ccACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAg          >  1:6287696/1‑93 (MQ=255)

                                                                               ccACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAg          <  2:5001707/93‑1 (MQ=255)

                                                                               ccACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAg          <  1:7747404/93‑1 (MQ=255)

                                                                                 aCGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTc        <  2:6485240/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  1:3451734/93‑1 (MQ=255)

                                                                                   ggCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTccc      <  1:7024508/93‑1 (MQ=255)

                                                                                   ggCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTccc      >  1:8812897/1‑93 (MQ=255)

                                                                                   ggCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTccc      <  2:2668392/93‑1 (MQ=255)

                                                                                     cAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcat    <  1:5710488/93‑1 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  >  2:3768415/1‑93 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  >  2:423059/1‑93 (MQ=255)

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  NC_000913/3893827‑3894013

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCGATCCCGACCTGCCACGGCAAGCT                                                                                               >  SRR4302541.5888645/1‑94 (MQ=60)

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCT                                                                                               >  SRR4302541.5888646/1‑94 (MQ=60)

 TATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCCAGCTC                                                                                              >  SRR4302541.3889645/1‑94 (MQ=60)

 TATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTC                                                                                              >  SRR4302541.2874074/1‑94 (MQ=60)

  ATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCA                                                                                             >  SRR4302541.3697602/1‑94 (MQ=60)

   TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCAT                                                                                            >  SRR4302541.4519978/1‑94 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           <  SRR4302541.3298081/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           <  SRR4302541.8321673/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           >  SRR4302541.492845/1‑94 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          >  SRR4302541.7380555/1‑94 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          >  SRR4302541.8354402/1‑94 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          >  SRR4302541.5623483/1‑94 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          <  SRR4302541.8056692/94‑1 (MQ=60)

     ATCCAGTAGCGAACGCGAAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          <  SRR4302541.4537795/94‑1 (MQ=60)

     ATCCAGTAGCGAACGAGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          <  SRR4302541.5501664/94‑1 (MQ=60)

       CCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCC                                                                                        >  SRR4302541.3553775/1‑94 (MQ=60)

         AGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTG                                                                                      >  SRR4302541.5895783/1‑94 (MQ=60)

          GTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGT                                                                                     >  SRR4302541.7143459/1‑94 (MQ=60)

           TAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTA                                                                                    <  SRR4302541.6430037/94‑1 (MQ=60)

           TAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTA                                                                                    <  SRR4302541.5634414/94‑1 (MQ=60)

            AGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAC                                                                                   <  SRR4302541.8889193/94‑1 (MQ=60)

             GCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACA                                                                                  >  SRR4302541.4220744/1‑94 (MQ=60)

             GCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACA                                                                                  <  SRR4302541.6145162/94‑1 (MQ=60)

             GCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACA                                                                                  >  SRR4302541.6811965/1‑94 (MQ=60)

             GCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACA                                                                                  <  SRR4302541.2826931/94‑1 (MQ=60)

              GGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAA                                                                                 <  SRR4302541.2319685/94‑1 (MQ=60)

              CGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAA                                                                                 >  SRR4302541.6818924/1‑94 (MQ=60)

               GAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAC                                                                                >  SRR4302541.4849421/1‑94 (MQ=60)

               GAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAC                                                                                >  SRR4302541.6838707/1‑94 (MQ=60)

                AACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACG                                                                               <  SRR4302541.440458/94‑1 (MQ=60)

                  CGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGAC                                                                             >  SRR4302541.8320453/1‑94 (MQ=60)

                  CGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGAC                                                                             >  SRR4302541.6748337/1‑94 (MQ=60)

                  CGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAAC                                                                             >  SRR4302541.3138590/1‑94 (MQ=60)

                   GCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACA                                                                            >  SRR4302541.6840831/1‑94 (MQ=60)

                    CGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAA                                                                           <  SRR4302541.1948440/94‑1 (MQ=60)

                     GGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAA                                                                          >  SRR4302541.3353498/1‑94 (MQ=60)

                     GGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAA                                                                          >  SRR4302541.3496063/1‑94 (MQ=60)

                      GAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAA                                                                         <  SRR4302541.2382439/94‑1 (MQ=60)

                       AAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAG                                                                        >  SRR4302541.1145028/1‑94 (MQ=60)

                        AAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGC                                                                       <  SRR4302541.7934489/94‑1 (MQ=60)

                         AATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCGCGGCAAGCTCATCGCCTGTACAACGACAAAAGCG                                                                      >  SRR4302541.2003563/1‑94 (MQ=60)

                          ATCGTCAGTAACAGCAGACCTATCGCGCCCCGGAAGATTGCGCCCATCCCGGCCTTCCACGGCAGGCCCATCGCCTGTACAACGACAAAATCGA                                                                     >  SRR4302541.6048125/1‑94 (MQ=60)

                           TCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAA                                                                    >  SRR4302541.2726442/1‑94 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAG                                                                   <  SRR4302541.8546692/94‑1 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAG                                                                   <  SRR4302541.3737480/94‑1 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAG                                                                   >  SRR4302541.4841991/1‑94 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAG                                                                   >  SRR4302541.976768/1‑94 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAG                                                                   >  SRR4302541.4067166/1‑94 (MQ=60)

                            CGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAG                                                                   >  SRR4302541.4067168/1‑94 (MQ=60)

                             gtcagtaactgccgaccgaccactccccggcagactgctcccaccccgcccgGCCACGGCAAGCACATCGCCTGTACAACGACAAAAGCGAATA                                                                  <  SRR4302541.1266683/42‑1 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGA                                                                  >  SRR4302541.6088852/1‑94 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGA                                                                  >  SRR4302541.7094123/1‑94 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGA                                                                  >  SRR4302541.2198555/1‑94 (MQ=60)

                               CAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAAC                                                                <  SRR4302541.3815206/94‑1 (MQ=60)

                               CAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAC                                                                <  SRR4302541.8022666/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACG                                                               >  SRR4302541.4307189/1‑94 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACG                                                               <  SRR4302541.1258403/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACG                                                               <  SRR4302541.6986383/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACG                                                               <  SRR4302541.3677682/94‑1 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCA                                                             <  SRR4302541.2537534/94‑1 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCA                                                             >  SRR4302541.2064549/1‑94 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCA                                                             <  SRR4302541.6794781/94‑1 (MQ=60)

                                   acgAGCAGACCTATCGCGACCCAGAATATTGCTCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAT                                                            <  SRR4302541.1519617/91‑1 (MQ=60)

                                   AACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCTACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAT                                                            <  SRR4302541.4981278/94‑1 (MQ=60)

                                   AACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCAT                                                            >  SRR4302541.456031/1‑94 (MQ=60)

                                    ACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATT                                                           >  SRR4302541.2485229/1‑94 (MQ=60)

                                    ACAGCACGCCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATT                                                           <  SRR4302541.2816162/94‑1 (MQ=60)

                                     CAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTC                                                          <  SRR4302541.1561416/94‑1 (MQ=60)

                                      AGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCA                                                         >  SRR4302541.1192098/1‑94 (MQ=60)

                                      AGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCA                                                         <  SRR4302541.4727613/94‑1 (MQ=60)

                                      AGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGCACAACGACAAAAGCGAAGAACGCATTCA                                                         <  SRR4302541.1107608/94‑1 (MQ=60)

                                       GCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAG                                                        <  SRR4302541.3230131/94‑1 (MQ=60)

                                         AGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGC                                                      >  SRR4302541.7993237/1‑94 (MQ=60)

                                          GCCCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCC                                                     <  SRR4302541.4169327/94‑1 (MQ=60)

                                            CCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCA                                                   >  SRR4302541.3713097/1‑94 (MQ=60)

                                            CCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCA                                                   >  SRR4302541.3157118/1‑94 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  <  SRR4302541.3320481/94‑1 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  <  SRR4302541.7623733/94‑1 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  >  SRR4302541.2694917/1‑94 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAA                                                  >  SRR4302541.2444983/1‑94 (MQ=60)

                                              TATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATA                                                 >  SRR4302541.8166574/1‑94 (MQ=60)

                                              TATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATA                                                 >  SRR4302541.1716149/1‑94 (MQ=60)

                                               ATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCGCATAG                                                >  SRR4302541.556972/1‑94 (MQ=60)

                                                tcggcCCCCAGAAGATTGCGCCCATCCGGACGTGCCACGGCAAGCTCATCGCCGGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGC                                               <  SRR4302541.3184948/89‑1 (MQ=60)

                                                TCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGC                                               <  SRR4302541.6873441/94‑1 (MQ=60)

                                                 CGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCG                                              <  SRR4302541.8177435/94‑1 (MQ=60)

                                                  GCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGG                                             >  SRR4302541.1032946/1‑94 (MQ=60)

                                                  CCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGG                                             <  SRR4302541.2365220/94‑1 (MQ=60)

                                                   cgtcgcacAAGATTGCGACCATCCGGACCTGACAAGGCAAGCGCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGG                                            <  SRR4302541.8076590/86‑1 (MQ=60)

                                                   CGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGG                                            >  SRR4302541.4369793/1‑94 (MQ=60)

                                                   CGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGG                                            >  SRR4302541.7402262/1‑94 (MQ=60)

                                                   CGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGG                                            <  SRR4302541.8273441/94‑1 (MQ=60)

                                                    GCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGT                                           <  SRR4302541.8820465/94‑1 (MQ=60)

                                                    GCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGT                                           >  SRR4302541.7586387/1‑94 (MQ=60)

                                                    GCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGG                                           >  SRR4302541.78924/1‑94 (MQ=60)

                                                     CCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACACCGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTG                                          >  SRR4302541.3772254/1‑94 (MQ=60)

                                                     CCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTG                                          >  SRR4302541.5431371/1‑94 (MQ=60)

                                                     CCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTG                                          >  SRR4302541.6777087/1‑94 (MQ=60)

                                                     CCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTG                                          >  SRR4302541.7451672/1‑94 (MQ=60)

                                                     CCCCAGAACATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTG                                          <  SRR4302541.3992058/94‑1 (MQ=60)

                                                      CCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGC                                         <  SRR4302541.885996/94‑1 (MQ=60)

                                                      CCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCACAGCGGGTGC                                         >  SRR4302541.5107674/1‑94 (MQ=60)

                                                       CCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCC                                        >  SRR4302541.720835/1‑94 (MQ=60)

                                                       CCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCC                                        >  SRR4302541.6044454/1‑94 (MQ=60)

                                                        CAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       >  SRR4302541.1322628/1‑94 (MQ=60)

                                                        CAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       >  SRR4302541.3789025/1‑94 (MQ=60)

                                                        CAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       >  SRR4302541.7967741/1‑94 (MQ=60)

                                                        CAGAAGAATGCGCCCATCCCGACCTGCCACGGCAAGCACATCGCCTGTACAACGACAAAAGCAAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       <  SRR4302541.6052765/94‑1 (MQ=60)

                                                         AGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAG                                      >  SRR4302541.2196910/1‑94 (MQ=60)

                                                         AGAAGATGGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAG                                      <  SRR4302541.8771349/94‑1 (MQ=60)

                                                           AAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTG                                    <  SRR4302541.8892918/94‑1 (MQ=60)

                                                           AAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTG                                    <  SRR4302541.6503395/94‑1 (MQ=60)

                                                            AGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC                                   >  SRR4302541.3286308/1‑94 (MQ=60)

                                                            AGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC                                   <  SRR4302541.6677962/94‑1 (MQ=60)

                                                            AGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC                                   >  SRR4302541.6197331/1‑94 (MQ=60)

                                                            AGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC                                   >  SRR4302541.1739758/1‑94 (MQ=60)

                                                             GATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCA                                  >  SRR4302541.4084552/1‑94 (MQ=60)

                                                             GATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCA                                  <  SRR4302541.658059/94‑1 (MQ=60)

                                                               TTGCGCCCATCCCGACCTGCCACGGCCCGCCCATCGCCTGTACAACGAAAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAC                                >  SRR4302541.4518862/1‑94 (MQ=60)

                                                                TGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACT                               <  SRR4302541.1009710/94‑1 (MQ=60)

                                                                TGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACT                               <  SRR4302541.8391255/94‑1 (MQ=60)

                                                                TGCGCCCACCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACT                               <  SRR4302541.8424673/94‑1 (MQ=60)

                                                                 GCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTG                              <  SRR4302541.5422304/94‑1 (MQ=60)

                                                                  CGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGG                             >  SRR4302541.899292/1‑94 (MQ=60)

                                                                   GCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGC                            >  SRR4302541.976559/1‑94 (MQ=60)

                                                                   GCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGC                            >  SRR4302541.5627029/1‑94 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           >  SRR4302541.6395669/1‑94 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           >  SRR4302541.1392800/1‑94 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           >  SRR4302541.8646453/1‑94 (MQ=60)

                                                                      CATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGG                         >  SRR4302541.1741436/1‑94 (MQ=60)

                                                                      CATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGG                         <  SRR4302541.271510/94‑1 (MQ=60)

                                                                      CATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGG                         <  SRR4302541.8359961/94‑1 (MQ=60)

                                                                       ATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGT                        >  SRR4302541.7408994/1‑94 (MQ=60)

                                                                       ATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGT                        >  SRR4302541.8823340/1‑94 (MQ=60)

                                                                       ATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGT                        >  SRR4302541.6666738/1‑94 (MQ=60)

                                                                        TCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTT                       <  SRR4302541.3816671/94‑1 (MQ=60)

                                                                        TCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTT                       <  SRR4302541.2941527/94‑1 (MQ=60)

                                                                        ACCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTT                       <  SRR4302541.2092189/94‑1 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      <  SRR4302541.3666770/94‑1 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      >  SRR4302541.6105344/1‑94 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      <  SRR4302541.4936728/94‑1 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      <  SRR4302541.6266541/94‑1 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      <  SRR4302541.7364299/94‑1 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     <  SRR4302541.4685419/94‑1 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     <  SRR4302541.3057341/94‑1 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     <  SRR4302541.2706390/94‑1 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     >  SRR4302541.134680/1‑94 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     >  SRR4302541.8591964/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.5825459/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.8123655/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.7277040/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.1192309/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.8653439/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.8653440/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGA                    >  SRR4302541.742422/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    <  SRR4302541.2021106/94‑1 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    <  SRR4302541.8192973/94‑1 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302541.437784/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302541.7449639/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302541.7376688/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302541.8230508/1‑94 (MQ=60)

                                                                            CACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   <  SRR4302541.7379653/94‑1 (MQ=60)

                                                                             CCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAA                  <  SRR4302541.7311865/94‑1 (MQ=60)

                                                                             ACCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAA                  <  SRR4302541.1774332/94‑1 (MQ=60)

                                                                              CCTGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGtaga                 >  SRR4302541.7878210/1‑90 (MQ=60)

                                                                               CTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAC                >  SRR4302541.8188808/1‑94 (MQ=60)

                                                                               CTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAC                >  SRR4302541.5384596/1‑94 (MQ=60)

                                                                               CTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAC                >  SRR4302541.1389099/1‑94 (MQ=60)

                                                                                TGCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACA               >  SRR4302541.2381256/1‑94 (MQ=60)

                                                                                 GCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAG              >  SRR4302541.6351933/1‑94 (MQ=60)

                                                                                 GCCACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAG              >  SRR4302541.1062370/1‑94 (MQ=60)

                                                                                 GCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAG              >  SRR4302541.2989755/1‑94 (MQ=60)

                                                                                  CCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGT             <  SRR4302541.7829838/94‑1 (MQ=60)

                                                                                   CACGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTC            >  SRR4302541.1669045/1‑94 (MQ=60)

                                                                                   CACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAATGGCAGGTTACCAAACAGTC            >  SRR4302541.6326388/1‑94 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGGTAGCAAAGAGTCCC          >  SRR4302541.5653315/1‑94 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          >  SRR4302541.2079392/1‑94 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          >  SRR4302541.8906991/1‑94 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          <  SRR4302541.3486215/94‑1 (MQ=60)

                                                                                      GGCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCA         <  SRR4302541.7099192/94‑1 (MQ=60)

                                                                                       GCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCAT        <  SRR4302541.7603260/94‑1 (MQ=60)

                                                                                       GCAAGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCAT        >  SRR4302541.7988963/1‑94 (MQ=60)

                                                                                        CAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATC       <  SRR4302541.7387309/94‑1 (MQ=60)

                                                                                        CAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATC       <  SRR4302541.5768721/94‑1 (MQ=60)

                                                                                         AAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA      <  SRR4302541.7323422/94‑1 (MQ=60)

                                                                                          AGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGTTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCAT     >  SRR4302541.6497636/1‑94 (MQ=60)

                                                                                          AGCTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCAT     >  SRR4302541.4877233/1‑94 (MQ=60)

                                                                                          AGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCAT     <  SRR4302541.5704662/94‑1 (MQ=60)

                                                                                            CTCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   >  SRR4302541.4211241/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  SRR4302541.4096023/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  SRR4302541.8332607/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  <  SRR4302541.3993155/94‑1 (MQ=60)

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  NC_000913/3893827‑3894013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`