Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	884	257.2	12958910	96.9%	12557183	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,893,920	C→T	G107S (GGC→AGC)	yieG ←	putative membrane/transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,893,920	0	C	T	100.0%	1129.2 / NA	289	G107S (GGC→AGC)	yieG	putative membrane/transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (141/148); total (141/148)

Only 100 of 293 total aligned reads displayed.

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

tcatcCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCTCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCa                                                                                         <  1:1631901/93‑1 (MQ=255)

       gTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTg                                                                                  >  2:1482809/1‑93 (MQ=255)

        tAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGt                                                                                 >  2:243032/1‑93 (MQ=255)

         aGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTa                                                                                >  2:528748/1‑93 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               >  1:640354/1‑93 (MQ=255)

          gCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAc                                                                               >  1:522994/1‑93 (MQ=255)

           cGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACa                                                                              >  1:2359037/1‑93 (MQ=255)

             aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAc                                                                            <  2:3580328/93‑1 (MQ=255)

             aaCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAc                                                                            >  2:5149549/1‑93 (MQ=255)

              aCGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAca                                                                           >  1:4946158/1‑92 (MQ=255)

                gcgGAAAATAGTCAGTAACAGCCGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGACAAGCTCATCGCCTGTACaacaac                                                                         <  1:4017020/93‑1 (MQ=37)

                  ggAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAcaacaacaa                                                                       <  2:3554611/93‑1 (MQ=255)

                    aaaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACaaaa                                                                     <  2:6368916/93‑1 (MQ=255)

                    aaaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACaaaa                                                                     >  1:807266/1‑93 (MQ=255)

                     aaaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAg                                                                    <  1:2900972/93‑1 (MQ=255)

                      aaTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGc                                                                   >  1:6364039/1‑93 (MQ=255)

                       aTCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCg                                                                  >  1:1001698/1‑93 (MQ=255)

                        tCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCga                                                                 <  2:4578529/93‑1 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                <  2:3234766/93‑1 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                >  2:3672346/1‑93 (MQ=255)

                         cGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCgaa                                                                >  1:4379592/1‑93 (MQ=255)

                           tCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCTTCCCGACCTGCCACGGAAAGCTCATCGCCTGTACAACAACAAAAGGgagaa                                                              >  1:5539149/1‑90 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  1:4211186/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            >  1:5073707/1‑93 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  1:690233/93‑1 (MQ=255)

                             aGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAc                                                            <  2:864954/93‑1 (MQ=255)

                              gTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACg                                                           >  2:1052066/1‑93 (MQ=255)

                               tAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGc                                                          >  2:419605/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       >  1:4502612/1‑93 (MQ=255)

                                  cagcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCAtt                                                       <  2:5039017/93‑1 (MQ=255)

                                   agcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTc                                                      >  1:1142339/1‑93 (MQ=255)

                                   agcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTc                                                      <  2:5101827/93‑1 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     >  1:3883778/1‑93 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     >  2:6037681/1‑93 (MQ=255)

                                    gcagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCa                                                     <  2:3535811/93‑1 (MQ=255)

                                     cagACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAg                                                    <  1:1287809/93‑1 (MQ=255)

                                      agACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAgg                                                   >  2:759237/1‑93 (MQ=255)

                                       gACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGc                                                  >  1:756746/1‑93 (MQ=255)

                                       gACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGc                                                  >  1:3164307/1‑93 (MQ=255)

                                        cccTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGcc                                                 <  2:3062581/92‑1 (MQ=255)

                                        aCCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGcc                                                 >  2:1358298/1‑93 (MQ=255)

                                         ccTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGccc                                                <  2:4355245/93‑1 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCa                                               >  1:2173226/1‑93 (MQ=255)

                                          cTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCa                                               >  2:3852198/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  1:4690220/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  2:2507596/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAt                                              >  2:2190386/1‑93 (MQ=255)

                                           tATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGCCCCAt                                              <  1:2387087/93‑1 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             >  1:2258532/1‑93 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             <  2:3298208/93‑1 (MQ=255)

                                            aTCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATa                                             >  2:4707678/1‑93 (MQ=255)

                                              cgcgCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGc                                           <  2:2819227/93‑1 (MQ=255)

                                               gcgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCg                                          <  1:2550359/93‑1 (MQ=255)

                                               gcgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCg                                          <  1:2805986/93‑1 (MQ=255)

                                                cgcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCgg                                         <  2:5394972/93‑1 (MQ=255)

                                                 gcCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCggg                                        >  2:5211364/1‑93 (MQ=255)

                                                     cAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc                                    >  2:5857833/1‑93 (MQ=255)

                                                     cAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGcc                                    >  1:6118649/1‑93 (MQ=255)

                                                       gaagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAg                                  >  1:4392768/1‑93 (MQ=255)

                                                        aagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt                                 <  2:6132268/93‑1 (MQ=255)

                                                        aagaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGt                                 <  1:89534/93‑1 (MQ=255)

                                                          gaTTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc                               >  2:5980488/1‑93 (MQ=255)

                                                            ttGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCaa                             <  2:6119534/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  1:4250154/93‑1 (MQ=255)

                                                             tGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAAc                            <  2:5427728/93‑1 (MQ=255)

                                                              gcgcCCATCCCGCCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt                           <  2:34126/93‑1 (MQ=255)

                                                              gcgcCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACt                           <  1:3311585/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        >  1:4830606/1‑93 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        <  1:3210846/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        <  1:4113922/93‑1 (MQ=255)

                                                                 cccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGc                        >  1:541162/1‑93 (MQ=255)

                                                                  ccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa                       <  2:1605410/93‑1 (MQ=255)

                                                                  ccATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCa                       >  1:3004248/1‑93 (MQ=255)

                                                                   cATCCCGCCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg                      <  2:4111311/93‑1 (MQ=255)

                                                                   cATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAg                      <  2:1150118/93‑1 (MQ=255)

                                                                    aTCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAgg                     >  1:5791679/1‑93 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 <  2:193897/93‑1 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 >  1:1760667/1‑93 (MQ=255)

                                                                        cGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCACATAGCGGGTGCCAGTGCAACTGGCAGGTTAg                 >  2:640863/1‑93 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                >  1:5883062/1‑93 (MQ=255)

                                                                         gACCTGCCACGGCAAGCTCAGCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGc                <  1:2644673/93‑1 (MQ=255)

                                                                          aCCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCa               >  1:1864482/1‑93 (MQ=255)

                                                                           ccTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCaa              <  1:5773806/93‑1 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAGCAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            <  1:351993/93‑1 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            >  2:3848471/1‑93 (MQ=255)

                                                                             tGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAAc            <  2:4459615/93‑1 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGGCCGTGGAACTGGCAGGTTAGCAAACa           >  1:6008575/1‑93 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACa           <  1:3641582/93‑1 (MQ=255)

                                                                              gCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACa           <  2:660053/93‑1 (MQ=255)

                                                                                 aCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTc        <  2:5750910/93‑1 (MQ=255)

                                                                                 aCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTc        <  1:3839380/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  2:4897475/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  1:6478342/93‑1 (MQ=255)

                                                                                  cGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTcc       <  1:2842883/93‑1 (MQ=255)

                                                                                   ggCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTccc      <  2:3330358/93‑1 (MQ=255)

                                                                                     cAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcat    >  2:1738254/1‑93 (MQ=255)

                                                                                      aaGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatc   >  2:3920966/1‑93 (MQ=255)

                                                                                      aaGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcata   >  2:4282768/1‑92 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  >  2:2069655/1‑93 (MQ=255)

                                                                                       aGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCcatca  <  1:1962138/93‑1 (MQ=255)

TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA  >  NC_000913/3893830‑3894009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  NC_000913/3893827‑3894013

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCT                                                                                               >  SRR4302534.121075/1‑94 (MQ=60)

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCT                                                                                               >  SRR4302534.5752556/1‑94 (MQ=60)

ATATCATCCAGTAGCGAAGGCTTAATATCGTCAGTAACAGCAGTCCTATCGCTCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCT                                                                                               <  SRR4302534.2387764/94‑1 (MQ=60)

 TATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTC                                                                                              >  SRR4302534.4245794/1‑94 (MQ=60)

 TATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTC                                                                                              <  SRR4302534.4793063/94‑1 (MQ=60)

  ATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCA                                                                                             <  SRR4302534.558661/94‑1 (MQ=60)

   TCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCTCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCAT                                                                                            <  SRR4302534.1674446/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           <  SRR4302534.4567714/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           <  SRR4302534.729434/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           >  SRR4302534.2447596/1‑94 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           <  SRR4302534.2909685/94‑1 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATC                                                                                           >  SRR4302534.6108631/1‑94 (MQ=60)

    CATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCCGCCACGGCAAGCTCATC                                                                                           <  SRR4302534.2703892/94‑1 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          >  SRR4302534.3055061/1‑94 (MQ=60)

     ATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCG                                                                                          <  SRR4302534.3951041/94‑1 (MQ=60)

       CCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCC                                                                                        <  SRR4302534.4061087/94‑1 (MQ=60)

         AGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTG                                                                                      <  SRR4302534.434635/94‑1 (MQ=60)

         AGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTG                                                                                      >  SRR4302534.4991652/1‑94 (MQ=60)

          GTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGT                                                                                     <  SRR4302534.1222976/94‑1 (MQ=60)

          GTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGT                                                                                     >  SRR4302534.2428175/1‑94 (MQ=60)

           TAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTA                                                                                    <  SRR4302534.5147655/94‑1 (MQ=60)

            AGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAC                                                                                   >  SRR4302534.535996/1‑94 (MQ=60)

            AGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAC                                                                                   >  SRR4302534.655891/1‑94 (MQ=60)

            AGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTAC                                                                                   >  SRR4302534.654074/1‑94 (MQ=60)

             GCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACA                                                                                  >  SRR4302534.2421657/1‑94 (MQ=60)

              CGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAA                                                                                 >  SRR4302534.2360058/1‑94 (MQ=60)

               GAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAC                                                                                >  SRR4302534.5251814/1‑94 (MQ=60)

               GAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAC                                                                                >  SRR4302534.3250914/1‑94 (MQ=60)

               GAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAAC                                                                                >  SRR4302534.83241/1‑94 (MQ=60)

                AACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACA                                                                               >  SRR4302534.5080154/1‑94 (MQ=60)

                   GCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACA                                                                            >  SRR4302534.688583/1‑94 (MQ=60)

                   GCGGAAAATAGTCAGTAACAGCCGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGACAAGCTCATCGCCTGTACAACAACA                                                                            <  SRR4302534.4124706/94‑1 (MQ=60)

                    CGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAA                                                                           >  SRR4302534.34421/1‑94 (MQ=60)

                    CGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAA                                                                           >  SRR4302534.533421/1‑94 (MQ=60)

                    CGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAA                                                                           >  SRR4302534.4197545/1‑94 (MQ=60)

                      GAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAA                                                                         >  SRR4302534.827551/1‑94 (MQ=60)

                       AAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAA                                                                        >  SRR4302534.6221300/1‑94 (MQ=60)

                        AAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGC                                                                       <  SRR4302534.2977100/94‑1 (MQ=60)

                        AAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGC                                                                       <  SRR4302534.1858503/94‑1 (MQ=60)

                        AAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGC                                                                       >  SRR4302534.6535880/1‑94 (MQ=60)

                         AATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCG                                                                      <  SRR4302534.2857989/94‑1 (MQ=60)

                         AATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCG                                                                      >  SRR4302534.1027378/1‑94 (MQ=60)

                         AATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCG                                                                      >  SRR4302534.1379217/1‑94 (MQ=60)

                           TCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAA                                                                    >  SRR4302534.4497641/1‑94 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCTTCCCGACCTGCCACGGAAAGCTCATCGCCTGTACAACAACAAAAGggagaa                                                                  >  SRR4302534.5688668/1‑88 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGA                                                                  >  SRR4302534.2599344/1‑94 (MQ=60)

                             GTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGA                                                                  >  SRR4302534.2334074/1‑94 (MQ=60)

                              TCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAA                                                                 >  SRR4302534.3138532/1‑94 (MQ=60)

                               CAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAC                                                                >  SRR4302534.5210678/1‑94 (MQ=60)

                               CAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAAC                                                                <  SRR4302534.3295120/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               <  SRR4302534.4324791/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               <  SRR4302534.707118/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               >  SRR4302534.727763/1‑94 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               <  SRR4302534.992962/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               <  SRR4302534.2184762/94‑1 (MQ=60)

                                AGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACG                                                               <  SRR4302534.3108478/94‑1 (MQ=60)

                                 GTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGC                                                              >  SRR4302534.4168046/1‑94 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCA                                                             >  SRR4302534.4263261/1‑94 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCA                                                             >  SRR4302534.793498/1‑94 (MQ=60)

                                  TAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCA                                                             >  SRR4302534.2902470/1‑94 (MQ=60)

                                   AACGGCAGACCTGGCGCGCCCCAGAAGATTGCGCCAATACCGACCTGCCACGGCAAGCTCATCGCCTGTACATCACCAAAAGCGAAGAACGCAT                                                            <  SRR4302534.3398208/94‑1 (MQ=55)

                                    ACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATT                                                           <  SRR4302534.5381117/94‑1 (MQ=60)

                                    ACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATT                                                           <  SRR4302534.344967/94‑1 (MQ=60)

                                    ACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATT                                                           >  SRR4302534.4624479/1‑94 (MQ=60)

                                    ACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATT                                                           <  SRR4302534.3717572/94‑1 (MQ=60)

                                     CAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTC                                                          >  SRR4302534.1172247/1‑94 (MQ=60)

                                      AGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCA                                                         >  SRR4302534.3988045/1‑94 (MQ=60)

                                      AGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCA                                                         <  SRR4302534.4923701/94‑1 (MQ=60)

                                        CAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGG                                                       >  SRR4302534.5844538/1‑94 (MQ=60)

                                        CAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGG                                                       <  SRR4302534.200592/94‑1 (MQ=60)

                                        CAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGG                                                       <  SRR4302534.1321722/94‑1 (MQ=60)

                                        CAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGG                                                       >  SRR4302534.663421/1‑94 (MQ=60)

                                         AGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAACAGCGAAGAAAGCATTCAGGC                                                      >  SRR4302534.1833580/1‑94 (MQ=60)

                                         AGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGC                                                      >  SRR4302534.775511/1‑94 (MQ=60)

                                         AGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGC                                                      >  SRR4302534.3247711/1‑94 (MQ=60)

                                            CCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCA                                                   <  SRR4302534.4227513/94‑1 (MQ=60)

                                            CCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCA                                                   >  SRR4302534.2230634/1‑94 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  >  SRR4302534.6013851/1‑94 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  <  SRR4302534.3788045/94‑1 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  >  SRR4302534.4817534/1‑94 (MQ=60)

                                             CTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCAT                                                  >  SRR4302534.68685/1‑94 (MQ=60)

                                              TATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATA                                                 >  SRR4302534.2318410/1‑94 (MQ=60)

                                              TATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATA                                                 >  SRR4302534.4378572/1‑94 (MQ=60)

                                              TATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGCCCCATA                                                 <  SRR4302534.2450518/94‑1 (MQ=60)

                                               ATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAG                                                >  SRR4302534.2674216/1‑94 (MQ=60)

                                               ATCGCGCCCCAGAAGATTGCGCCCACCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAG                                                <  SRR4302534.6545714/94‑1 (MQ=60)

                                                  GCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGG                                             <  SRR4302534.2879782/94‑1 (MQ=60)

                                                  GCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGG                                             <  SRR4302534.2617977/94‑1 (MQ=60)

                                                   CGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGG                                            >  SRR4302534.4338420/1‑94 (MQ=60)

                                                    GCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGT                                           <  SRR4302534.2297516/94‑1 (MQ=60)

                                                      CCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGC                                         <  SRR4302534.1525787/94‑1 (MQ=60)

                                                      CCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGC                                         <  SRR4302534.2313045/94‑1 (MQ=60)

                                                       CCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCC                                        >  SRR4302534.1770274/1‑94 (MQ=60)

                                                       CCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCC                                        >  SRR4302534.1277117/1‑94 (MQ=60)

                                                       CCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCC                                        >  SRR4302534.6285087/1‑94 (MQ=60)

                                                        CAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       <  SRR4302534.1723523/94‑1 (MQ=60)

                                                        CAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCA                                       <  SRR4302534.825080/94‑1 (MQ=60)

                                                         AGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAG                                      <  SRR4302534.5578020/94‑1 (MQ=60)

                                                         AGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAG                                      >  SRR4302534.4511238/1‑94 (MQ=60)

                                                          GAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGT                                     <  SRR4302534.3658551/94‑1 (MQ=60)

                                                           AAGATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTG                                    <  SRR4302534.91921/94‑1 (MQ=60)

                                                             GATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCA                                  >  SRR4302534.3956943/1‑94 (MQ=60)

                                                              ATTGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAA                                 >  SRR4302534.3382006/1‑94 (MQ=60)

                                                                TGCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACT                               <  SRR4302534.4364812/94‑1 (MQ=60)

                                                                 GCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTG                              <  SRR4302534.6509976/94‑1 (MQ=60)

                                                                 GCGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTG                              <  SRR4302534.3400033/94‑1 (MQ=60)

                                                                  CGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGG                             >  SRR4302534.5568511/1‑94 (MQ=60)

                                                                  CGCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGG                             >  SRR4302534.659706/1‑94 (MQ=60)

                                                                   GCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGC                            >  SRR4302534.4961669/1‑94 (MQ=60)

                                                                   GCCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGC                            >  SRR4302534.554556/1‑94 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           >  SRR4302534.3082839/1‑94 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           <  SRR4302534.5979104/94‑1 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           <  SRR4302534.3296046/94‑1 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           <  SRR4302534.4224594/94‑1 (MQ=60)

                                                                    CCCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCA                           >  SRR4302534.378116/1‑94 (MQ=60)

                                                                     CCATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAG                          <  SRR4302534.2805150/94‑1 (MQ=60)

                                                                      CATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGG                         >  SRR4302534.5948810/1‑94 (MQ=60)

                                                                       ATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGT                        >  SRR4302534.1922034/1‑94 (MQ=60)

                                                                       ATCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGT                        >  SRR4302534.6266960/1‑94 (MQ=60)

                                                                        TCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTT                       <  SRR4302534.5028263/94‑1 (MQ=60)

                                                                        TCCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTT                       <  SRR4302534.2186344/94‑1 (MQ=60)

                                                                         CCCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTA                      <  SRR4302534.4378258/94‑1 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     >  SRR4302534.1806348/1‑94 (MQ=60)

                                                                          CCGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAG                     <  SRR4302534.4108520/94‑1 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302534.5102795/1‑94 (MQ=60)

                                                                           CGACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGC                    >  SRR4302534.6042805/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302534.3001764/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302534.1913017/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302534.4789367/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   >  SRR4302534.2561507/1‑94 (MQ=60)

                                                                            GACCTGCCACGGCAAGCTCAGCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCA                   <  SRR4302534.2714602/94‑1 (MQ=60)

                                                                             ACCTGCCGCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAA                  <  SRR4302534.456229/94‑1 (MQ=60)

                                                                             ACCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGGTAGCAA                  >  SRR4302534.969932/1‑94 (MQ=60)

                                                                              CCTGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAA                 <  SRR4302534.5930439/94‑1 (MQ=60)

                                                                                TGCCACGGCAAGCTCATCGCCTGTACAACAGCAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACA               <  SRR4302534.361003/94‑1 (MQ=60)

                                                                                TGCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGGCCGTGGAACTGGCAGGTTAGCAAACA               >  SRR4302534.6171824/1‑94 (MQ=60)

                                                                                 GCCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAG              <  SRR4302534.3739449/94‑1 (MQ=60)

                                                                                  CCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGT             >  SRR4302534.6090907/1‑94 (MQ=60)

                                                                                  CCACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGT             <  SRR4302534.5931101/94‑1 (MQ=60)

                                                                                   CACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTC            <  SRR4302534.4504811/94‑1 (MQ=60)

                                                                                    CCGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCC           <  SRR4302534.875343/94‑1 (MQ=60)

                                                                                    ACGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCC           <  SRR4302534.3942504/94‑1 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          >  SRR4302534.5410997/1‑94 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          <  SRR4302534.2917576/94‑1 (MQ=60)

                                                                                     CGGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCC          <  SRR4302534.6652939/94‑1 (MQ=60)

                                                                                      GGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCA         <  SRR4302534.1091675/94‑1 (MQ=60)

                                                                                      GGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCA         >  SRR4302534.5940358/1‑94 (MQ=60)

                                                                                      GGCAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCA         <  SRR4302534.4927476/94‑1 (MQ=60)

                                                                                        CAAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATC       >  SRR4302534.2968439/1‑94 (MQ=60)

                                                                                        CAAGCTCATCGACTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGGTAGCAAACAGTCCCATC       >  SRR4302534.4685611/1‑94 (MQ=60)

                                                                                         AAGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCA      >  SRR4302534.5718334/1‑94 (MQ=60)

                                                                                          AGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCAT     <  SRR4302534.2013494/94‑1 (MQ=60)

                                                                                          AGCTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCAT     >  SRR4302534.2213202/1‑94 (MQ=60)

                                                                                            CTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   <  SRR4302534.5962760/94‑1 (MQ=60)

                                                                                            CTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   >  SRR4302534.4298142/1‑94 (MQ=60)

                                                                                            CTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   >  SRR4302534.2834224/1‑94 (MQ=60)

                                                                                            CTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   >  SRR4302534.4165581/1‑94 (MQ=60)

                                                                                            CTCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAA   >  SRR4302534.3455072/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  SRR4302534.5494421/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  SRR4302534.2358360/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  <  SRR4302534.2523226/94‑1 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  SRR4302534.2834296/1‑94 (MQ=60)

                                                                                             TCATCGCCTGTACAACAACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGGTAGCAAACAGTCCCATCATAAT  >  SRR4302534.5716707/1‑94 (MQ=60)

CTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAAT  >  NC_000913/3893827‑3894013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`