Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,896,324 +G coding (698/711 nt) b3718 ← putative isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,896,3241.G100.0% 1037.4 / NA 301V233A (GTG→GCG) b3718putative isomerase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (137/164);  total (137/164)

Only 100 of 330 total aligned reads displayed.

TTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA  >  NC_000913/3896232‑3896410
                                                                                             |                                                                                      
ttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                                                         <  1:7147534/93‑1 (MQ=255)
 tCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCag                                                                                        <  1:2506243/93‑2 (MQ=255)
  cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagc                                                                                       <  1:4199947/93‑3 (MQ=255)
   gTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagcg                                                                                      <  2:3949340/93‑4 (MQ=255)
    tAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagcgg                                                                                     >  2:3615476/1‑89 (MQ=255)
    tAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCagcgg                                                                                     <  2:5646406/93‑5 (MQ=255)
      gTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCt                                                                                   >  1:2445845/1‑93 (MQ=255)
       ttATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCtt                                                                                  >  2:8733385/1‑93 (MQ=255)
        tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCttt                                                                                 >  1:54978/1‑93 (MQ=255)
          tttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAt                                                                               >  2:6300844/1‑93 (MQ=255)
          tttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAt                                                                               >  2:1012802/1‑93 (MQ=255)
           ttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                                                              <  1:6288898/93‑1 (MQ=255)
           ttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                                                              >  2:310020/1‑93 (MQ=255)
            tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCa                                                                             >  2:7478223/1‑93 (MQ=255)
            tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCa                                                                             <  1:7580967/93‑1 (MQ=255)
                 aatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                                                        >  1:5904461/1‑93 (MQ=255)
                  atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAtt                                                                       <  1:5389787/93‑1 (MQ=255)
                  atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAtt                                                                       <  1:3709944/93‑1 (MQ=255)
                   tGAGAGCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                                                      <  2:8118276/93‑1 (MQ=255)
                        aCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATc                                                                 >  2:7888752/1‑93 (MQ=255)
                         cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCa                                                                <  1:1485803/93‑1 (MQ=255)
                         cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCa                                                                <  1:7282264/93‑1 (MQ=255)
                          aGGCCGGCGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTCACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                                                               >  1:4240765/1‑93 (MQ=255)
                          aGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                                                               >  2:3035975/1‑93 (MQ=255)
                           ggCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                                                              >  2:3525581/1‑93 (MQ=255)
                           ggCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                                                              <  1:1789136/93‑1 (MQ=255)
                              cGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGaa                                                           >  2:1476092/1‑93 (MQ=255)
                                gAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGGTAATTCTGCGGCAGCGGCTTTATCATCGATTACCATCAGCGAAgg                                                         <  1:1525604/93‑1 (MQ=255)
                                 aGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGa                                                        <  1:5297533/93‑1 (MQ=255)
                                  gCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAt                                                       <  2:1949567/93‑1 (MQ=255)
                                    gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGc                                                     <  2:1971625/93‑1 (MQ=255)
                                     tAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCa                                                    >  1:5699813/1‑93 (MQ=255)
                                       aTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                                                  <  2:6950039/93‑1 (MQ=255)
                                       aTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGGGCTAATTCTTCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                                                  >  1:4764672/1‑93 (MQ=255)
                                        ttCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCt                                                 <  1:1157752/93‑1 (MQ=255)
                                         tCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTg                                                <  1:6421980/93‑1 (MQ=255)
                                          cacacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTga                                               >  1:2416726/1‑92 (MQ=255)
                                           acacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                                              >  2:5150563/1‑93 (MQ=255)
                                           acacaTCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa                                              >  1:4421063/1‑93 (MQ=255)
                                            cacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCaa                                             <  1:5201742/93‑1 (MQ=255)
                                            cacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCaa                                             >  1:1982096/1‑93 (MQ=255)
                                            cacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCaa                                             <  1:7112840/93‑1 (MQ=255)
                                            cacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCaa                                             >  1:4723461/1‑93 (MQ=255)
                                             acaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAac                                            >  2:3972521/1‑93 (MQ=255)
                                              caTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAaca                                           <  1:6269480/93‑1 (MQ=255)
                                               aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac                                          >  2:4175128/1‑93 (MQ=255)
                                               aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac                                          <  2:1046858/93‑1 (MQ=255)
                                                  cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGa                                       <  2:6706763/93‑1 (MQ=255)
                                                  cGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGa                                       <  2:6412823/93‑1 (MQ=255)
                                                   ggCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaa                                      >  2:8567962/1‑93 (MQ=255)
                                                    gCCTTATTTCTTAAGCTTAACCTAGTGATAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGCTGCAGCTGCTACACAGAAg                                     >  2:4316679/1‑93 (MQ=255)
                                                    gCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAg                                     <  1:6980794/93‑1 (MQ=255)
                                                    gCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAg                                     >  1:3321824/1‑93 (MQ=255)
                                                     ccTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGaaac                                    <  1:4023563/93‑3 (MQ=255)
                                                     ccTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGc                                    <  1:3534808/93‑1 (MQ=255)
                                                     ccTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGc                                    <  2:3318167/93‑1 (MQ=255)
                                                     ccTGATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGc                                    <  1:8027515/93‑1 (MQ=255)
                                                      cTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCt                                   >  2:2487613/1‑93 (MQ=255)
                                                      cTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCt                                   >  2:6816145/1‑93 (MQ=255)
                                                         aTTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGa                                <  1:8648242/93‑1 (MQ=255)
                                                           ttCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAc                              >  1:1854468/1‑93 (MQ=255)
                                                            tCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACa                             <  1:523583/93‑1 (MQ=255)
                                                            tCTTAAGCTTAACCGAGTGCTAATTCTGAGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACa                             >  1:2633083/1‑93 (MQ=255)
                                                             cTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACAt                            <  2:2113100/93‑1 (MQ=255)
                                                               tAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCt                          <  2:1425067/93‑1 (MQ=255)
                                                                aaGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAACATCAGCGAAGGATGCAGCTGCAACACGGATGTTGGAACATAtt                         >  1:2143373/1‑93 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        <  1:1109814/93‑1 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        <  1:2308853/93‑1 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        >  2:6097260/1‑93 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        >  2:5855924/1‑93 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        >  1:6609646/1‑93 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        >  1:2752532/1‑93 (MQ=255)
                                                                 aGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTc                        >  2:1246772/1‑93 (MQ=255)
                                                                  gCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCg                       <  2:3827949/93‑1 (MQ=255)
                                                                   cTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCgg                      <  1:2543711/93‑1 (MQ=255)
                                                                   cTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCgg                      <  2:1721131/93‑1 (MQ=255)
                                                                   cTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCgg                      <  1:1708035/93‑1 (MQ=255)
                                                                     tAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTa                    <  2:716792/93‑1 (MQ=255)
                                                                     tAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTa                    <  2:8308018/93‑1 (MQ=255)
                                                                      aaCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTaa                   <  2:8405474/93‑1 (MQ=255)
                                                                      aaCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACATCTTCGGTaa                   >  2:8513684/1‑93 (MQ=255)
                                                                       aCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAc                  <  1:4315811/93‑1 (MQ=255)
                                                                       aCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAc                  >  2:2986599/1‑93 (MQ=255)
                                                                        ccGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAcc                 >  1:6626580/1‑93 (MQ=255)
                                                                         cGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCg                <  2:7654870/93‑1 (MQ=255)
                                                                         cGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGCAAGCTGGAACATCTTCGGTAACCg                >  2:3208022/1‑93 (MQ=255)
                                                                          gAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACATCTTCGGTAACCgg               <  2:8661088/93‑1 (MQ=255)
                                                                           aGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGa              <  2:5734359/93‑1 (MQ=255)
                                                                           aGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGa              <  2:5228304/93‑1 (MQ=255)
                                                                            gTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAc             >  1:8735610/1‑93 (MQ=255)
                                                                            gTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAc             >  1:3779736/1‑93 (MQ=255)
                                                                            gTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAc             >  2:2806716/1‑93 (MQ=255)
                                                                              gCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCt           <  1:4514727/93‑1 (MQ=255)
                                                                              gCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCt           <  1:311570/93‑1 (MQ=255)
                                                                               cTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCtt          >  1:8278456/1‑93 (MQ=255)
                                                                               cTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGATGCAACACGGAAGATGGAACATCTTCGGTAACCGGACCtt          >  1:3835679/1‑93 (MQ=255)
                                                                                 aaTTCTGCGGCAGCGGCTTTATCAGCGATTACCATCCGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGc        >  2:2434189/1‑93 (MQ=255)
                                                                                 aaTTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGc        >  1:5059376/1‑93 (MQ=255)
                                                                                    tCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGa     <  2:8079347/93‑1 (MQ=255)
                                                                                      tGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAc   <  2:4687064/93‑1 (MQ=255)
                                                                                             |                                                                                      
TTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA  >  NC_000913/3896232‑3896410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT  >  NC_000913/3896231‑3896413
                                                                                             |                                                                                          
TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA                                                                                            <  SRR4302541.1160315/94‑1 (MQ=60)
 TTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑G                                                                                          <  SRR4302541.7223725/94‑1 (MQ=60)
  TCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgc                                                                                          <  SRR4302541.2531515/94‑3 (MQ=60)
  TCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgc                                                                                          <  SRR4302541.5741298/94‑3 (MQ=60)
   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                         <  SRR4302541.3213351/94‑4 (MQ=60)
   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                         <  SRR4302541.1505676/94‑4 (MQ=60)
   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                         <  SRR4302541.4241686/94‑4 (MQ=60)
   CGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAgcg                                                                                         >  SRR4302541.5914809/1‑91 (MQ=60)
    GTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGG                                                                                        >  SRR4302541.4057603/1‑94 (MQ=60)
    GTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGG                                                                                        >  SRR4302541.174685/1‑94 (MQ=60)
     TAGTTATTTAAATAATGAGAACAGGCCTGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGC                                                                                       >  SRR4302541.291662/1‑94 (MQ=60)
     TAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGC                                                                                       >  SRR4302541.2083269/1‑94 (MQ=60)
      AGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCT                                                                                      >  SRR4302541.2470133/1‑94 (MQ=60)
      AGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCT                                                                                      <  SRR4302541.8835020/94‑1 (MQ=60)
      AGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCT                                                                                      <  SRR4302541.7267533/94‑1 (MQ=60)
        TTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTT                                                                                    >  SRR4302541.55411/1‑94 (MQ=60)
        TTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTT                                                                                    >  SRR4302541.8323866/1‑94 (MQ=60)
            TTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCA                                                                                <  SRR4302541.6353145/94‑1 (MQ=60)
             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                               <  SRR4302541.7661961/94‑1 (MQ=60)
             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                               <  SRR4302541.7661960/94‑1 (MQ=60)
             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                               <  SRR4302541.3785894/94‑1 (MQ=60)
             TAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAG                                                                               <  SRR4302541.7100535/94‑1 (MQ=60)
              AAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGC                                                                              <  SRR4302541.2343839/94‑1 (MQ=60)
              AAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGC                                                                              <  SRR4302541.1269795/94‑1 (MQ=60)
                ATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGA                                                                            <  SRR4302541.435495/94‑1 (MQ=60)
                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                           >  SRR4302541.5964552/1‑94 (MQ=60)
                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                           <  SRR4302541.481537/94‑1 (MQ=60)
                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                           >  SRR4302541.3407362/1‑94 (MQ=60)
                 TAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAT                                                                           <  SRR4302541.6334497/94‑1 (MQ=60)
                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                         <  SRR4302541.3747383/94‑1 (MQ=60)
                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                         <  SRR4302541.5445113/94‑1 (MQ=60)
                   ATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTA                                                                         <  SRR4302541.6490343/94‑1 (MQ=60)
                     GAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACC                                                                       <  SRR4302541.2541316/94‑1 (MQ=60)
                     GAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACC                                                                       <  SRR4302541.5287463/94‑1 (MQ=60)
                       GAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAT                                                                     <  SRR4302541.2732917/94‑1 (MQ=60)
                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                    <  SRR4302541.1661603/94‑1 (MQ=60)
                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                    <  SRR4302541.6555347/94‑1 (MQ=60)
                        AACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATC                                                                    >  SRR4302541.4306712/1‑94 (MQ=60)
                         ACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCA                                                                   <  SRR4302541.3275681/94‑1 (MQ=60)
                         ACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCA                                                                   <  SRR4302541.7179087/94‑1 (MQ=60)
                         ACAGGCCGGAGCGTAATTCACACATCCGGCCTTATGTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCA                                                                   <  SRR4302541.5408133/94‑1 (MQ=60)
                          CAGGCCGGCGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTCACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  >  SRR4302541.4283074/1‑94 (MQ=60)
                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  >  SRR4302541.4283073/1‑94 (MQ=60)
                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  <  SRR4302541.1500426/94‑1 (MQ=60)
                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  >  SRR4302541.7229420/1‑94 (MQ=60)
                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  >  SRR4302541.7182342/1‑94 (MQ=60)
                          CAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAG                                                                  <  SRR4302541.7359976/94‑1 (MQ=60)
                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTACACGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGCTTACCATCAGC                                                                 >  SRR4302541.1145783/1‑94 (MQ=60)
                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                 <  SRR4302541.1778142/94‑1 (MQ=60)
                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                 >  SRR4302541.6259130/1‑94 (MQ=60)
                           AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGC                                                                 >  SRR4302541.1145784/1‑94 (MQ=60)
                            GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCG                                                                <  SRR4302541.1806520/94‑1 (MQ=60)
                            GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCG                                                                <  SRR4302541.8104468/94‑1 (MQ=60)
                             GCCGGNGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGA                                                               >  SRR4302541.4089532/1‑94 (MQ=60)
                              CCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAA                                                              <  SRR4302541.3758582/94‑1 (MQ=60)
                               CGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAG                                                             <  SRR4302541.6468288/94‑1 (MQ=60)
                               CGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAG                                                             >  SRR4302541.3166246/1‑94 (MQ=60)
                               CGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAG                                                             >  SRR4302541.2471233/1‑94 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGCAGG                                                            >  SRR4302541.1191695/1‑94 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            <  SRR4302541.4252105/94‑1 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            >  SRR4302541.270437/1‑94 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            <  SRR4302541.4860538/94‑1 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            >  SRR4302541.6351236/1‑94 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            <  SRR4302541.4252104/94‑1 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            >  SRR4302541.8759026/1‑94 (MQ=60)
                                GGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGG                                                            <  SRR4302541.2995700/94‑1 (MQ=60)
                                 GAGCGTAATTCCCACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTGATCAGCTATTACCATCAGCGAAGGA                                                           <  SRR4302541.7194359/94‑1 (MQ=60)
                                 GAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGGTAATTCTGCGGCAGCGGCTTTATCATCGATTACCATCAGCGAAGGA                                                           <  SRR4302541.1540857/94‑1 (MQ=60)
                                 GAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGA                                                           >  SRR4302541.2000025/1‑94 (MQ=60)
                                 GAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGA                                                           <  SRR4302541.7194603/94‑1 (MQ=60)
                                  AGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAT                                                          <  SRR4302541.4509339/94‑1 (MQ=60)
                                  AGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAT                                                          <  SRR4302541.5352061/94‑1 (MQ=60)
                                   GCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATG                                                         <  SRR4302541.6682216/94‑1 (MQ=60)
                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCA                                                       >  SRR4302541.5757937/1‑94 (MQ=60)
                                     GTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGAGAAGGATGCA                                                       >  SRR4302541.542584/1‑94 (MQ=60)
                                      TAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAG                                                      <  SRR4302541.6439033/94‑1 (MQ=60)
                                       AATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGC                                                     <  SRR4302541.4511487/94‑1 (MQ=60)
                                       AATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGC                                                     >  SRR4302541.2333097/1‑94 (MQ=60)
                                       AATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGGGCTAATTCTTCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGC                                                     >  SRR4302541.4813330/1‑94 (MQ=60)
                                        ATTCGCACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCT                                                    <  SRR4302541.4799612/94‑1 (MQ=60)
                                         TTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTG                                                   <  SRR4302541.1168841/94‑1 (MQ=60)
                                          TCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGC                                                  >  SRR4302541.5523321/1‑94 (MQ=60)
                                          TCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGC                                                  <  SRR4302541.6487448/94‑1 (MQ=60)
                                          TCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGA                                                  >  SRR4302541.2440537/1‑94 (MQ=60)
                                           CACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCA                                                 >  SRR4302541.8197530/1‑94 (MQ=60)
                                           CACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCA                                                 <  SRR4302541.5389476/94‑1 (MQ=60)
                                           CACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCCGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCA                                                 <  SRR4302541.4122780/94‑1 (MQ=60)
                                           CACACATCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCA                                                 >  SRR4302541.4465443/1‑94 (MQ=60)
                                            ACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAA                                                >  SRR4302541.4771640/1‑94 (MQ=60)
                                            ACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAA                                                >  SRR4302541.2001254/1‑94 (MQ=60)
                                            ACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAA                                                >  SRR4302541.8571252/1‑94 (MQ=60)
                                             CACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAAC                                               <  SRR4302541.5255309/94‑1 (MQ=60)
                                             CACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAAC                                               >  SRR4302541.5147502/1‑94 (MQ=60)
                                             CACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAAC                                               <  SRR4302541.7188597/94‑1 (MQ=60)
                                               CATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACAC                                             >  SRR4302541.5295156/1‑94 (MQ=60)
                                               CATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACAC                                             <  SRR4302541.6333495/94‑1 (MQ=60)
                                                ATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACG                                            <  SRR4302541.5868590/94‑1 (MQ=60)
                                                ATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACG                                            >  SRR4302541.4465812/1‑94 (MQ=60)
                                                ATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACG                                            >  SRR4302541.749788/1‑94 (MQ=60)
                                                  CCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGA                                          <  SRR4302541.1976450/94‑1 (MQ=60)
                                                    GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAG                                        >  SRR4302541.3355136/1‑94 (MQ=60)
                                                     GCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGC                                       <  SRR4302541.7055163/94‑1 (MQ=60)
                                                     GCCTTATTTCTGAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGC                                       <  SRR4302541.4405116/94‑1 (MQ=60)
                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGGT                                      >  SRR4302541.164117/1‑94 (MQ=60)
                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                      <  SRR4302541.4773359/94‑1 (MQ=60)
                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                      <  SRR4302541.732365/94‑1 (MQ=60)
                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                      <  SRR4302541.3570441/94‑1 (MQ=60)
                                                      CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACT                                      <  SRR4302541.4063320/94‑1 (MQ=60)
                                                      CCTGATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT                                      <  SRR4302541.8115772/94‑1 (MQ=60)
                                                       CTTATTTCTTAAGCTTACCCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     <  SRR4302541.7892302/94‑1 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCTATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     <  SRR4302541.6679779/94‑1 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     >  SRR4302541.2437402/1‑94 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     >  SRR4302541.1854109/1‑94 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     <  SRR4302541.3625539/94‑1 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTG                                     <  SRR4302541.3793735/94‑1 (MQ=60)
                                                       CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGAGATTACCCTCAGCGAAGGATGCAGCTGCAACACGaaggggg                                     >  SRR4302541.1963681/1‑87 (MQ=60)
                                                        TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGG                                    <  SRR4302541.2620579/94‑1 (MQ=60)
                                                          ATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAA                                  <  SRR4302541.8740850/94‑1 (MQ=60)
                                                           TTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAAC                                 >  SRR4302541.1872379/1‑94 (MQ=60)
                                                            TTCTTAAGCTTAACCGAGTGCTAATTCTGAGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACA                                >  SRR4302541.2659340/1‑94 (MQ=60)
                                                             TCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACAT                               <  SRR4302541.528482/94‑1 (MQ=60)
                                                              CTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATC                              >  SRR4302541.4656903/1‑94 (MQ=60)
                                                              CTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATC                              >  SRR4302541.4656904/1‑94 (MQ=60)
                                                               TTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCT                             >  SRR4302541.1646444/1‑94 (MQ=60)
                                                                TAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCACCACGGAAGCTGGAACATTTT                            >  SRR4302541.2605641/1‑94 (MQ=60)
                                                                TAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAACATCAGCGAAGGATGCAGCTGCAACACGGATGTTGGAACATATT                            >  SRR4302541.2164113/1‑94 (MQ=60)
                                                                TAAGCGTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTT                            <  SRR4302541.8454491/94‑1 (MQ=60)
                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                           >  SRR4302541.3735339/1‑94 (MQ=60)
                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                           >  SRR4302541.6677382/1‑94 (MQ=60)
                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                           >  SRR4302541.4023949/1‑94 (MQ=60)
                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                           >  SRR4302541.2780184/1‑94 (MQ=60)
                                                                 AAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCCGCAACACGGAAGCTGGAACATCTTC                           <  SRR4302541.6971631/94‑1 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          >  SRR4302541.2463565/1‑94 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          <  SRR4302541.2469251/94‑1 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          <  SRR4302541.1120240/94‑1 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          <  SRR4302541.2331262/94‑1 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          >  SRR4302541.3830849/1‑94 (MQ=60)
                                                                  AGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCG                          <  SRR4302541.5338002/94‑1 (MQ=60)
                                                                   GCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGG                         >  SRR4302541.5693740/1‑94 (MQ=60)
                                                                    GTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCACGGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                        <  SRR4302541.2569233/94‑1 (MQ=60)
                                                                    CTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                        <  SRR4302541.2569234/94‑1 (MQ=60)
                                                                    CTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGT                        <  SRR4302541.1724756/94‑1 (MQ=60)
                                                                      TAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACATCTTCGGTAA                      <  SRR4302541.1994747/94‑1 (MQ=60)
                                                                       AACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAC                     <  SRR4302541.2058541/94‑1 (MQ=60)
                                                                       AACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAC                     <  SRR4302541.7570883/94‑1 (MQ=60)
                                                                       AACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAC                     >  SRR4302541.5131999/1‑94 (MQ=60)
                                                                       AACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAAC                     >  SRR4302541.182021/1‑94 (MQ=60)
                                                                        ACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACC                    >  SRR4302541.6694510/1‑94 (MQ=60)
                                                                        ACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACC                    <  SRR4302541.4358912/94‑1 (MQ=60)
                                                                        ACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACC                    >  SRR4302541.4365560/1‑94 (MQ=60)
                                                                         CCGAGCGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTCACCG                   >  SRR4302541.6162800/1‑94 (MQ=60)
                                                                          CGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGG                  <  SRR4302541.2329462/94‑1 (MQ=60)
                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                 >  SRR4302541.4932042/1‑94 (MQ=60)
                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                 <  SRR4302541.3102077/94‑1 (MQ=60)
                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGA                 >  SRR4302541.2249569/1‑94 (MQ=60)
                                                                           GAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGACTACCATCCGCGAGGGATGCAGTCACAACACGGAAGCTGGAACATCTTCAGTAACCGGA                 >  SRR4302541.4662750/1‑94 (MQ=57)
                                                                            AGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAC                >  SRR4302541.2021267/1‑94 (MQ=60)
                                                                            AGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAC                >  SRR4302541.8829130/1‑94 (MQ=60)
                                                                            AGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGAC                >  SRR4302541.3817705/1‑94 (MQ=60)
                                                                             GTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACC               >  SRR4302541.6478353/1‑94 (MQ=60)
                                                                             GTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACC               >  SRR4302541.2618687/1‑94 (MQ=60)
                                                                             GTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACC               >  SRR4302541.8371314/1‑94 (MQ=60)
                                                                              TGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCT              <  SRR4302541.990527/94‑1 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT             <  SRR4302541.314333/94‑1 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT             <  SRR4302541.953406/94‑1 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT             <  SRR4302541.5495689/94‑1 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT             <  SRR4302541.4560281/94‑1 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTT             >  SRR4302541.8368517/1‑94 (MQ=60)
                                                                               GCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGATGCAACACGGAAGATGGAACATCTTCGGTAACCGGACCTT             >  SRR4302541.3874318/1‑94 (MQ=60)
                                                                                CTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTG            >  SRR4302541.8783631/1‑94 (MQ=60)
                                                                                 TAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGC           >  SRR4302541.6849184/1‑94 (MQ=60)
                                                                                 TAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGC           >  SRR4302541.5111410/1‑94 (MQ=60)
                                                                                 TAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAACTGGAACATCTTCGGTAACCGGACCTTGC           >  SRR4302541.384928/1‑94 (MQ=60)
                                                                                  AATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCA          <  SRR4302541.5275272/94‑1 (MQ=60)
                                                                                      CTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAAC      <  SRR4302541.3511770/94‑1 (MQ=60)
                                                                                       TGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA     <  SRR4302541.1502660/94‑1 (MQ=60)
                                                                                       TGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACA     >  SRR4302541.2488572/1‑94 (MQ=60)
                                                                                        GCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT    >  SRR4302541.8521756/1‑94 (MQ=60)
                                                                                        GCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACAT    <  SRR4302541.5790645/94‑1 (MQ=60)
                                                                                        GCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGAAACTTCTTCGTTAACCGGACGTTGCAGAACAT    >  SRR4302541.8293282/1‑94 (MQ=60)
                                                                                         CGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATT   <  SRR4302541.3345534/94‑1 (MQ=60)
                                                                                          GGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT  >  SRR4302541.8299356/1‑94 (MQ=60)
                                                                                             |                                                                                          
TTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCA‑CGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTT  >  NC_000913/3896231‑3896413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑