Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,896,435 G→A A196V (GCG→GTG)  b3718 ← putative isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,896,4350GA99.4% 1238.4 / ‑5.8 350A196V (GCG→GTG) b3718putative isomerase
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (205/143);  total (206/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 380 total aligned reads displayed.

ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG  >  NC_000913/3896345‑3896524
                                                                                          |                                                                                         
aTCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCcacg                                                                                         >  2:4269967/1‑93 (MQ=255)
aTCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCCTGCAGCACATTTTTCAGCGCCTGCGCTTTACCcacg                                                                                         >  1:4009906/1‑93 (MQ=255)
 tCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCacgc                                                                                        >  2:6606672/1‑93 (MQ=255)
 tCAGCGAAGGATGCAGCGGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCacgc                                                                                        <  1:5448748/93‑1 (MQ=255)
  cAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAcgcc                                                                                       <  2:8239172/93‑1 (MQ=255)
  cAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACACTTTTCAGTGCCTGCGCTTTACCCAcgcc                                                                                       >  2:7802900/1‑93 (MQ=255)
    gCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAcgccgc                                                                                     >  2:4209592/1‑93 (MQ=255)
    gCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAcgccgc                                                                                     >  1:1803066/1‑93 (MQ=255)
     cGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCt                                                                                    >  2:1874883/1‑93 (MQ=255)
      gAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTg                                                                                   >  1:8096164/1‑93 (MQ=255)
       aaGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGa                                                                                  >  2:8792333/1‑93 (MQ=255)
       aaGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGa                                                                                  <  2:5800784/93‑1 (MQ=255)
        aGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAc                                                                                 >  2:3136091/1‑93 (MQ=255)
         ggATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACa                                                                                >  2:263690/1‑93 (MQ=255)
            tGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAAtt                                                                             >  1:2855292/1‑93 (MQ=255)
             gCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACGTTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTa                                                                            <  2:1462817/93‑1 (MQ=255)
             gCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTa                                                                            <  1:2970957/93‑1 (MQ=255)
             gCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTa                                                                            >  1:791319/1‑93 (MQ=255)
               aGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATc                                                                          >  1:2433528/1‑93 (MQ=255)
                gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCa                                                                         >  1:7355004/1‑93 (MQ=255)
                 cTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAg                                                                        >  1:6747523/1‑93 (MQ=255)
                  tGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAga                                                                       >  1:2782453/1‑92 (MQ=255)
                  tGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAga                                                                       >  1:6275136/1‑92 (MQ=255)
                  tGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGc                                                                       >  2:1038704/1‑93 (MQ=255)
                   gCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCa                                                                      >  1:8191299/1‑93 (MQ=255)
                   gCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCa                                                                      >  2:5632209/1‑93 (MQ=255)
                   gCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCa                                                                      >  1:3420003/1‑93 (MQ=255)
                    cAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCaa                                                                     <  1:2597360/93‑1 (MQ=255)
                     aaCACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCGTTACCCACGCCGCTGCCAATTATCAGCAAg                                                                    >  1:4263058/1‑93 (MQ=255)
                     aaCACGGAAACTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAg                                                                    >  1:7257418/1‑93 (MQ=255)
                      acacGGAAGCTGGCACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGt                                                                   >  2:3473200/1‑93 (MQ=255)
                      acacGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGt                                                                   >  1:265752/1‑93 (MQ=255)
                      acacGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGt                                                                   >  2:2342908/1‑93 (MQ=255)
                       cacGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGtt                                                                  >  2:5459761/1‑93 (MQ=255)
                          ggAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttttt                                                               >  2:8682033/1‑93 (MQ=255)
                            aaGCTGGAACATCTTCGGTAACCGGACCTTGCAGAATATTTTTCAGTGCCTGCGCTATACCCACTCCGTTGACAATCATCAGCAATTTTTTcg                                                             >  2:8074619/1‑93 (MQ=255)
                             aGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgc                                                            >  1:924804/1‑93 (MQ=255)
                               cTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgccg                                                          <  1:7015989/93‑1 (MQ=255)
                                tGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgccgc                                                         >  1:6817638/1‑93 (MQ=255)
                                 ggAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcc                                                        >  2:374538/1‑93 (MQ=255)
                                  gAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcct                                                       >  1:7599287/1‑92 (MQ=255)
                                  gAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCa                                                       <  1:3235526/93‑1 (MQ=255)
                                  gAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCa                                                       <  2:6967159/93‑1 (MQ=255)
                                    aCATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatg                                                     <  1:6121872/93‑1 (MQ=255)
                                     cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGTCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatga                                                    <  1:3811827/93‑1 (MQ=255)
                                     cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatga                                                    <  1:4516683/93‑1 (MQ=255)
                                       tCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatgatg                                                  >  1:7858836/1‑93 (MQ=255)
                                       tCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatgatg                                                  >  1:1220282/1‑93 (MQ=255)
                                         ttCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCt                                                >  2:6745142/1‑93 (MQ=255)
                                         ttCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCt                                                <  1:4296158/93‑1 (MQ=255)
                                         ttCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCt                                                <  2:4560298/93‑1 (MQ=255)
                                          tCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtt                                               <  2:2396084/93‑1 (MQ=255)
                                           cGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCttt                                              <  2:6462407/93‑1 (MQ=255)
                                              tAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCg                                           <  1:1949193/93‑1 (MQ=255)
                                               aaCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCgg                                          <  2:6226913/93‑1 (MQ=255)
                                               aaCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCgg                                          >  1:8121702/1‑93 (MQ=255)
                                               aaCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCgg                                          >  2:8495179/1‑93 (MQ=255)
                                                aCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGc                                         >  2:6889803/1‑93 (MQ=255)
                                                 ccGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcc                                        <  1:8275735/93‑1 (MQ=255)
                                                  cGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGccc                                       <  1:3588932/93‑1 (MQ=255)
                                                   cgACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcccc                                      <  1:6477530/92‑1 (MQ=255)
                                                    gACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCa                                     >  2:1363952/1‑93 (MQ=255)
                                                    gACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCa                                     >  1:5035462/1‑93 (MQ=255)
                                                     aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt                                    <  1:8431601/93‑1 (MQ=255)
                                                     aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt                                    <  1:1727955/93‑1 (MQ=255)
                                                     aCCTTGCAGAACATTTTTCAGTGACTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt                                    <  1:1458311/93‑1 (MQ=255)
                                                      ccTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATc                                   >  1:6046941/1‑93 (MQ=255)
                                                       cTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCg                                  >  2:5071957/1‑93 (MQ=255)
                                                           cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCGGCCATGATGCTTTTCGGCCCCATCGTCAc                              >  2:2237349/1‑93 (MQ=255)
                                                           cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc                              <  1:10656/93‑1 (MQ=255)
                                                           cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc                              >  2:6366554/1‑93 (MQ=255)
                                                           cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc                              >  1:7120626/1‑93 (MQ=255)
                                                            aGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCTGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg                             >  2:1719445/1‑93 (MQ=255)
                                                            aGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg                             <  1:8709398/93‑1 (MQ=255)
                                                            aGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg                             >  2:1994980/1‑93 (MQ=255)
                                                             gAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGt                            <  2:6492511/93‑1 (MQ=255)
                                                             gAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGt                            >  2:1684519/1‑93 (MQ=255)
                                                               aCATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAg                          >  1:6921163/1‑93 (MQ=255)
                                                               aCATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAg                          >  1:8652327/1‑93 (MQ=255)
                                                               aCATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAg                          >  1:5928616/1‑93 (MQ=255)
                                                                 aTTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCt                        >  2:8310198/1‑93 (MQ=255)
                                                                   ttttCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGt                      >  2:7106762/1‑93 (MQ=255)
                                                                    tttCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTc                     <  1:8541007/93‑1 (MQ=255)
                                                                      tCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTCGCTGTCAg                   >  1:1113986/1‑93 (MQ=255)
                                                                      tCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAg                   <  1:4834501/93‑1 (MQ=255)
                                                                       cAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAgg                  <  2:3321824/93‑1 (MQ=255)
                                                                         gTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGcc                >  1:8766617/1‑92 (MQ=255)
                                                                          tGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCAc               <  2:1171648/93‑1 (MQ=255)
                                                                           gCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACt              >  1:6646066/1‑93 (MQ=255)
                                                                             cTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTaa            >  1:4083512/1‑93 (MQ=255)
                                                                              tGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAAc           >  2:4796649/1‑93 (MQ=255)
                                                                               gcgcTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACg          >  1:2243536/1‑93 (MQ=255)
                                                                                cgcTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGa         >  1:8551450/1‑93 (MQ=255)
                                                                                 gcTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGaa        >  2:2996210/1‑93 (MQ=255)
                                                                                  cTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGaaa       <  1:5240233/93‑1 (MQ=255)
                                                                                    ttACCCACGCCGCTGACAATTGTCAGCAAGTTTTTCGCCGCCATGCTGCTTTTCGGCCCCATCGTCACGTAGCTGTCAAGCACTAACGAAAAg     >  2:4683681/1‑93 (MQ=255)
                                                                                    ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCCTCGTCACGTAGCTGTCAGGCACTAACGAAAAg     <  2:7324963/93‑1 (MQ=255)
                                                                                    ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg     <  1:639516/93‑1 (MQ=255)
                                                                                    ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg     >  1:5363376/1‑93 (MQ=255)
                                                                                       cccACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGGcg  >  2:2536286/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG  >  NC_000913/3896345‑3896524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 227 total aligned reads displayed.
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCG  >  NC_000913/3896343‑3896527
                                                                                            |                                                                                            
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAC                                                                                             >  SRR4302541.6109419/1‑94 (MQ=60)
 CATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACG                                                                                            >  SRR4302541.88646/1‑94 (MQ=60)
 CATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACG                                                                                            <  SRR4302541.5755985/94‑1 (MQ=60)
 CATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACG                                                                                            <  SRR4302541.4734513/94‑1 (MQ=60)
 CATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCCTGCAGCACATTTTTCAGCGCCTGCGCTTTACCCACG                                                                                            >  SRR4302541.4049573/1‑94 (MQ=60)
  ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGC                                                                                           <  SRR4302541.6469249/94‑1 (MQ=60)
  ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGC                                                                                           >  SRR4302541.7765576/1‑94 (MQ=60)
   TCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCC                                                                                          <  SRR4302541.4219822/94‑1 (MQ=60)
   TCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCC                                                                                          <  SRR4302541.617021/94‑1 (MQ=60)
   TCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCC                                                                                          >  SRR4302541.8144831/1‑94 (MQ=60)
   TCAGCGAAGGATGCAGCGGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCC                                                                                          <  SRR4302541.5504658/94‑1 (MQ=60)
    CAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCG                                                                                         >  SRR4302541.6068899/1‑94 (MQ=60)
     AGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGC                                                                                        >  SRR4302541.1820578/1‑94 (MQ=60)
      GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCT                                                                                       >  SRR4302541.8724661/1‑94 (MQ=60)
      GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCT                                                                                       >  SRR4302541.8909613/1‑94 (MQ=60)
      GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCT                                                                                       <  SRR4302541.8789861/94‑1 (MQ=60)
      GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCT                                                                                       <  SRR4302541.6360096/94‑1 (MQ=60)
      GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCT                                                                                       <  SRR4302541.6843274/94‑1 (MQ=60)
       CGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTG                                                                                      >  SRR4302541.8184919/1‑94 (MQ=60)
       CGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTG                                                                                      >  SRR4302541.3613267/1‑94 (MQ=60)
       CGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTG                                                                                      >  SRR4302541.7322725/1‑94 (MQ=60)
       CGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTG                                                                                      <  SRR4302541.4152281/94‑1 (MQ=60)
       CGAAGGATGCAGCTGCAACACGGAAACTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTG                                                                                      >  SRR4302541.5026750/1‑94 (MQ=60)
        GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA                                                                                     >  SRR4302541.5453114/1‑94 (MQ=60)
        GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA                                                                                     >  SRR4302541.1878966/1‑94 (MQ=60)
        GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA                                                                                     <  SRR4302541.1806026/94‑1 (MQ=60)
        GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA                                                                                     >  SRR4302541.1354315/1‑94 (MQ=60)
          AGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACA                                                                                   <  SRR4302541.7185667/94‑1 (MQ=60)
             ATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATT                                                                                >  SRR4302541.2883996/1‑94 (MQ=60)
             ATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATT                                                                                <  SRR4302541.388667/94‑1 (MQ=60)
              TGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTA                                                                               >  SRR4302541.798637/1‑94 (MQ=60)
               GCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTAT                                                                              >  SRR4302541.4994695/1‑94 (MQ=60)
               GCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTAT                                                                              <  SRR4302541.3000897/94‑1 (MQ=60)
                CAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATC                                                                             <  SRR4302541.2678125/94‑1 (MQ=60)
                CAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATC                                                                             >  SRR4302541.1587163/1‑94 (MQ=60)
                CAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATC                                                                             <  SRR4302541.108193/94‑1 (MQ=60)
                 AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA                                                                            <  SRR4302541.2581162/94‑1 (MQ=60)
                 AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA                                                                            >  SRR4302541.8524842/1‑94 (MQ=60)
                 AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA                                                                            <  SRR4302541.3929225/94‑1 (MQ=60)
                 AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA                                                                            >  SRR4302541.7433578/1‑94 (MQ=60)
                  GCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAG                                                                           >  SRR4302541.6819651/1‑94 (MQ=60)
                   CTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGC                                                                          >  SRR4302541.2576239/1‑94 (MQ=60)
                   CTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGA                                                                          >  SRR4302541.6339207/1‑94 (MQ=60)
                   CTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGA                                                                          >  SRR4302541.2810506/1‑94 (MQ=60)
                    TGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCA                                                                         >  SRR4302541.8280704/1‑94 (MQ=60)
                    TGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCA                                                                         >  SRR4302541.3454147/1‑94 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGTCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       <  SRR4302541.8588510/94‑1 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       <  SRR4302541.8488803/94‑1 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       >  SRR4302541.4305667/1‑94 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       <  SRR4302541.2623377/94‑1 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       <  SRR4302541.8639607/94‑1 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       >  SRR4302541.7569358/1‑94 (MQ=60)
                      CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCGTTACCCACGCCGCTGCCAATTATCAGCAAG                                                                       >  SRR4302541.4305666/1‑94 (MQ=60)
                      CAACACGGAAACTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG                                                                       >  SRR4302541.7334833/1‑94 (MQ=60)
                       AACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGT                                                                      >  SRR4302541.6121343/1‑94 (MQ=60)
                       AACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGT                                                                      >  SRR4302541.267932/1‑94 (MQ=60)
                       AACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGT                                                                      >  SRR4302541.777388/1‑94 (MQ=60)
                       AACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGT                                                                      <  SRR4302541.6438129/94‑1 (MQ=60)
                           CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT                                                                  <  SRR4302541.8668504/94‑1 (MQ=60)
                           CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT                                                                  <  SRR4302541.3651779/94‑1 (MQ=60)
                           CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT                                                                  <  SRR4302541.5863515/94‑1 (MQ=60)
                           CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT                                                                  <  SRR4302541.8823265/94‑1 (MQ=60)
                           CGGAAGCTGGAACATCTTCGGTAACCGGAACTTGCAGAACATTTTTCAGTGCCTGAGCTTTACCCACGCCGCTGACAATTATCAGCAAGTATTT                                                                  >  SRR4302541.4320004/1‑94 (MQ=60)
                            GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC                                                                 >  SRR4302541.1452363/1‑94 (MQ=60)
                            GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC                                                                 <  SRR4302541.3419684/94‑1 (MQ=60)
                            GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC                                                                 <  SRR4302541.8278618/94‑1 (MQ=60)
                            GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC                                                                 >  SRR4302541.1145640/1‑94 (MQ=60)
                            GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC                                                                 >  SRR4302541.1787097/1‑94 (MQ=60)
                             GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCG                                                                <  SRR4302541.6802603/94‑1 (MQ=60)
                             GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCG                                                                <  SRR4302541.1078384/94‑1 (MQ=60)
                             GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCG                                                                <  SRR4302541.1170114/94‑1 (MQ=60)
                             GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCG                                                                <  SRR4302541.3188761/94‑1 (MQ=60)
                              AAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGC                                                               >  SRR4302541.933489/1‑94 (MQ=60)
                              AAACTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGC                                                               <  SRR4302541.8210589/94‑1 (MQ=60)
                               AGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCC                                                              <  SRR4302541.1683709/94‑1 (MQ=60)
                                 CTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGC                                                            >  SRR4302541.6890596/1‑94 (MQ=60)
                                 CTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGC                                                            >  SRR4302541.1901546/1‑94 (MQ=60)
                                 CTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGC                                                            <  SRR4302541.7090597/94‑1 (MQ=60)
                                 CTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGC                                                            >  SRR4302541.8762937/1‑94 (MQ=60)
                                 CTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGC                                                            >  SRR4302541.2811865/1‑94 (MQ=60)
                                  TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC                                                           >  SRR4302541.5908532/1‑94 (MQ=60)
                                  TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC                                                           >  SRR4302541.7050892/1‑94 (MQ=60)
                                  TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC                                                           <  SRR4302541.6537522/94‑1 (MQ=60)
                                  TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC                                                           >  SRR4302541.402793/1‑94 (MQ=60)
                                   GGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCT                                                          >  SRR4302541.7680482/1‑94 (MQ=60)
                                   GGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCA                                                          >  SRR4302541.1184295/1‑94 (MQ=60)
                                    GAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCAT                                                         <  SRR4302541.3268199/94‑1 (MQ=60)
                                     AACATCTTCGGTAACAGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCAACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATG                                                        >  SRR4302541.1569688/1‑94 (MQ=60)
                                      ACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGA                                                       >  SRR4302541.6892655/1‑94 (MQ=60)
                                      ACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGA                                                       >  SRR4302541.6892648/1‑94 (MQ=60)
                                      ACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGA                                                       >  SRR4302541.2944811/1‑94 (MQ=60)
                                      ACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGA                                                       <  SRR4302541.6184400/94‑1 (MQ=60)
                                       CATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGTCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT                                                      <  SRR4302541.3850216/94‑1 (MQ=60)
                                       CATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT                                                      <  SRR4302541.4562257/94‑1 (MQ=60)
                                       CATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT                                                      <  SRR4302541.8639218/94‑1 (MQ=60)
                                       CATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT                                                      >  SRR4302541.2749405/1‑94 (MQ=60)
                                       CATCTGCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT                                                      <  SRR4302541.7934145/94‑1 (MQ=60)
                                        ATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATG                                                     >  SRR4302541.7945147/1‑94 (MQ=60)
                                        ATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATG                                                     >  SRR4302541.1232218/1‑94 (MQ=60)
                                           TTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTT                                                  <  SRR4302541.4339071/94‑1 (MQ=60)
                                           TTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTT                                                  <  SRR4302541.2512633/94‑1 (MQ=60)
                                            TCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTT                                                 <  SRR4302541.2176622/94‑1 (MQ=60)
                                             CGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTT                                                >  SRR4302541.1316701/1‑94 (MQ=60)
                                                TAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGG                                             >  SRR4302541.4542705/1‑94 (MQ=60)
                                                TAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGG                                             >  SRR4302541.8210644/1‑94 (MQ=60)
                                                 AACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGC                                            >  SRR4302541.8327962/1‑94 (MQ=60)
                                                 AACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGC                                            >  SRR4302541.6553237/1‑94 (MQ=60)
                                                  ACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCC                                           >  SRR4302541.3431702/1‑94 (MQ=60)
                                                  ACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCC                                           >  SRR4302541.8215471/1‑94 (MQ=60)
                                                   CCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCC                                          <  SRR4302541.8365782/94‑1 (MQ=60)
                                                    CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCC                                         >  SRR4302541.2633984/1‑94 (MQ=60)
                                                    CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCC                                         >  SRR4302541.7418656/1‑94 (MQ=60)
                                                    CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCC                                         <  SRR4302541.3625317/94‑1 (MQ=60)
                                                    CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGC‑TTTCGGCCCCA                                        >  SRR4302541.4795054/1‑94 (MQ=60)
                                                     GGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCT                                        >  SRR4302541.2646689/1‑94 (MQ=60)
                                                     GGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCA                                        >  SRR4302541.5087265/1‑94 (MQ=60)
                                                     CGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCA                                        <  SRR4302541.6543540/94‑1 (MQ=60)
                                                      GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT                                       >  SRR4302541.6713133/1‑94 (MQ=60)
                                                      GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT                                       <  SRR4302541.3674367/94‑1 (MQ=60)
                                                      GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT                                       <  SRR4302541.7486187/94‑1 (MQ=60)
                                                      GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT                                       >  SRR4302541.5372903/1‑94 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      >  SRR4302541.6625989/1‑94 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      <  SRR4302541.8522696/94‑1 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      <  SRR4302541.1744831/94‑1 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      >  SRR4302541.6108788/1‑94 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      <  SRR4302541.8522697/94‑1 (MQ=60)
                                                       ACCTTGCAGAACATTTTTCAGTGACTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC                                      <  SRR4302541.1472560/94‑1 (MQ=60)
                                                        CCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCG                                     >  SRR4302541.2273938/1‑94 (MQ=60)
                                                         CTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGT                                    >  SRR4302541.8449093/1‑94 (MQ=60)
                                                         CTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGT                                    <  SRR4302541.6363405/94‑1 (MQ=60)
                                                          TTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTC                                   >  SRR4302541.7302938/1‑94 (MQ=60)
                                                           TGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCA                                  >  SRR4302541.7006192/1‑94 (MQ=60)
                                                           TGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCA                                  >  SRR4302541.715694/1‑94 (MQ=60)
                                                            GCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAC                                 >  SRR4302541.7196470/1‑94 (MQ=60)
                                                             CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG                                >  SRR4302541.4665506/1‑94 (MQ=60)
                                                             CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG                                >  SRR4302541.3529472/1‑94 (MQ=60)
                                                             CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG                                >  SRR4302541.4083093/1‑94 (MQ=60)
                                                             CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG                                <  SRR4302541.10725/94‑1 (MQ=60)
                                                              AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT                               <  SRR4302541.8802583/94‑1 (MQ=60)
                                                              AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT                               >  SRR4302541.729415/1‑94 (MQ=60)
                                                               GAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTA                              >  SRR4302541.8159960/1‑94 (MQ=60)
                                                               GAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTA                              >  SRR4302541.740959/1‑94 (MQ=60)
                                                                AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG                             >  SRR4302541.5988995/1‑94 (MQ=60)
                                                                AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG                             >  SRR4302541.8744971/1‑94 (MQ=60)
                                                                AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG                             >  SRR4302541.3019044/1‑94 (MQ=60)
                                                                 ACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGC                            >  SRR4302541.8354250/1‑94 (MQ=60)
                                                                  CATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCT                           >  SRR4302541.5262158/1‑94 (MQ=60)
                                                                  CATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCT                           >  SRR4302541.5262160/1‑94 (MQ=60)
                                                                  CATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCT                           >  SRR4302541.4162846/1‑94 (MQ=60)
                                                                    TTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGT                         <  SRR4302541.2380239/94‑1 (MQ=60)
                                                                     TTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTC                        >  SRR4302541.4921935/1‑94 (MQ=60)
                                                                      TTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCA                       >  SRR4302541.8042053/1‑94 (MQ=60)
                                                                      TTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCA                       <  SRR4302541.8632831/94‑1 (MQ=60)
                                                                      TTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCA                       <  SRR4302541.4110650/94‑1 (MQ=60)
                                                                       TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTCGCTGTCAG                      >  SRR4302541.1124449/1‑94 (MQ=60)
                                                                       TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAG                      >  SRR4302541.5884058/1‑94 (MQ=60)
                                                                       TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAG                      >  SRR4302541.2879001/1‑94 (MQ=60)
                                                                       TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAG                      >  SRR4302541.7027063/1‑94 (MQ=60)
                                                                       TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCAGCCCCATCGTCACGTAGCTGTCAG                      >  SRR4302541.8221154/1‑94 (MQ=60)
                                                                        TCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGG                     <  SRR4302541.4883783/94‑1 (MQ=60)
                                                                          AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCC                   >  SRR4302541.8860356/1‑94 (MQ=60)
                                                                          AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCA                   <  SRR4302541.6965375/94‑1 (MQ=60)
                                                                          AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCA                   >  SRR4302541.8860355/1‑94 (MQ=60)
                                                                          AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCA                   >  SRR4302541.6856727/1‑94 (MQ=60)
                                                                            TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACT                 >  SRR4302541.6714235/1‑94 (MQ=60)
                                                                            TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACT                 >  SRR4302541.1805173/1‑94 (MQ=60)
                                                                            TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACT                 >  SRR4302541.6181181/1‑94 (MQ=60)
                                                                            TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACT                 <  SRR4302541.5447717/94‑1 (MQ=60)
                                                                            TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGCAGCTGTCAGGCACT                 >  SRR4302541.5392549/1‑94 (MQ=60)
                                                                              CCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAC               >  SRR4302541.989220/1‑94 (MQ=60)
                                                                              CCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAA               >  SRR4302541.6338548/1‑94 (MQ=60)
                                                                              CCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAA               >  SRR4302541.8669315/1‑94 (MQ=60)
                                                                              CCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAA               >  SRR4302541.4123819/1‑94 (MQ=60)
                                                                                TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG             <  SRR4302541.4464111/94‑1 (MQ=60)
                                                                                TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG             >  SRR4302541.2265251/1‑94 (MQ=60)
                                                                                 GCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGA            >  SRR4302541.8643358/1‑94 (MQ=60)
                                                                                  CGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAA           >  SRR4302541.2426114/1‑94 (MQ=60)
                                                                                  CGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAA           <  SRR4302541.2002279/94‑1 (MQ=60)
                                                                                   GCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAA          >  SRR4302541.8860544/1‑94 (MQ=60)
                                                                                   GCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAA          >  SRR4302541.6075833/1‑94 (MQ=60)
                                                                                   GCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAA          >  SRR4302541.2998893/1‑94 (MQ=60)
                                                                                   GCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGACCCATCGTCACGTAGCTGTCAGGCACTAACGAAA          >  SRR4302541.6075834/1‑94 (MQ=60)
                                                                                    CTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCGTCGTCACGTAGCTGTCAGGCACTAACGAAAA         <  SRR4302541.2835730/94‑1 (MQ=60)
                                                                                    CTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAA         <  SRR4302541.5294223/94‑1 (MQ=60)
                                                                                     TTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAG        <  SRR4302541.3192020/94‑1 (MQ=60)
                                                                                     TTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAG        >  SRR4302541.5418457/1‑94 (MQ=60)
                                                                                     TTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAG        <  SRR4302541.6736218/94‑1 (MQ=60)
                                                                                     TTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAG        <  SRR4302541.7968515/94‑1 (MQ=60)
                                                                                      TTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGT       <  SRR4302541.7975482/94‑1 (MQ=60)
                                                                                      TTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGT       <  SRR4302541.645552/94‑1 (MQ=60)
                                                                                       TACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTC      <  SRR4302541.2064796/94‑1 (MQ=60)
                                                                                        ACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG     <  SRR4302541.8778617/94‑1 (MQ=60)
                                                                                         CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGCAAAGTCGC    >  SRR4302541.4820684/1‑94 (MQ=60)
                                                                                         CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGC    >  SRR4302541.8543207/1‑94 (MQ=60)
                                                                                         CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGC    >  SRR4302541.4820685/1‑94 (MQ=60)
                                                                                         CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGC    >  SRR4302541.8433515/1‑94 (MQ=60)
                                                                                          CCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCC   <  SRR4302541.4507213/94‑1 (MQ=60)
                                                                                          CCACGCCGCTGACAATTATCAGCAAGTTGTTCGCCGCCATGATGCTTTTCGGCCCCGTCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCC   <  SRR4302541.1822173/94‑1 (MQ=60)
                                                                                           CACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCTG  >  SRR4302541.7184635/1‑94 (MQ=60)
                                                                                           CACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCG  >  SRR4302541.3115465/1‑94 (MQ=60)
                                                                                            |                                                                                            
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCG  >  NC_000913/3896343‑3896527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑