Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,899,440 T→C T137A (ACC→GCC)  yieC ← putative receptor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,899,4400TC99.7% 1040.1 / ‑5.8 318T137A (ACC→GCC) yieCputative receptor protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (151/165);  total (152/166)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 334 total aligned reads displayed.

TTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAAT  >  NC_000913/3899350‑3899529
                                                                                          |                                                                                         
 tAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGcccc                                                                                        >  2:827690/1‑93 (MQ=255)
 tAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGcccc                                                                                        <  2:2567719/93‑1 (MQ=255)
  aaCTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCcccc                                                                                       <  2:7394595/93‑1 (MQ=255)
  aaCTGCAAATCAAACCAGCCGGAGTATACGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCcccc                                                                                       >  1:6345581/1‑93 (MQ=255)
     tGCAAATCAACCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCaa                                                                                    <  2:7088118/93‑1 (MQ=255)
     tGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCaa                                                                                    >  2:5895158/1‑93 (MQ=255)
     tGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCaa                                                                                    >  2:4089861/1‑93 (MQ=255)
         aaTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAg                                                                                >  2:6844067/1‑93 (MQ=255)
          aTCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGa                                                                               <  1:1959269/93‑1 (MQ=255)
           tCAACCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGAGTTAGGTGACCCATGAGAGGCGGCCCCCCAACCAGaa                                                                              <  2:1019234/93‑1 (MQ=255)
           tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGaa                                                                              <  2:44810/93‑1 (MQ=255)
           tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGaa                                                                              >  2:1602258/1‑93 (MQ=255)
           tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGaa                                                                              <  2:2811853/93‑1 (MQ=255)
           tCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCAAACCAGaa                                                                              <  1:8362805/93‑1 (MQ=255)
            cAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAAc                                                                             <  2:1936104/93‑1 (MQ=255)
            cAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAAc                                                                             >  1:508338/1‑93 (MQ=255)
              aaCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACgg                                                                           >  2:3243782/1‑93 (MQ=255)
               aCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGt                                                                          <  2:3606777/93‑1 (MQ=255)
                 cAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTaa                                                                        <  2:6784038/93‑1 (MQ=255)
                 cAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTaa                                                                        <  1:917212/93‑1 (MQ=255)
                  aGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAt                                                                       >  1:324963/1‑93 (MQ=255)
                  aGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAt                                                                       >  2:4183215/1‑93 (MQ=255)
                   gCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATa                                                                      <  1:278297/93‑1 (MQ=255)
                   gCCGGAGTATTCGTGACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATa                                                                      <  1:7770563/93‑1 (MQ=255)
                    ccGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAg                                                                     <  1:7739201/93‑1 (MQ=255)
                     cGGAGGATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGGAATAGc                                                                    <  1:4028839/93‑1 (MQ=255)
                      ggAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGcc                                                                   >  1:7083757/1‑93 (MQ=255)
                       gAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGCACGGTAATAGCCg                                                                  >  2:4381202/1‑93 (MQ=255)
                       gAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCg                                                                  >  1:2880509/1‑93 (MQ=255)
                        aGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGt                                                                 <  1:4673692/93‑1 (MQ=255)
                         gTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGtt                                                                <  2:3936168/93‑1 (MQ=255)
                          tATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACTATGAGAGGCGGCACCCCAACCAGAACGGCAATAGCCGTTg                                                               >  1:6011521/1‑93 (MQ=255)
                          tATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTg                                                               <  2:866208/93‑1 (MQ=255)
                          tATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTg                                                               <  2:3994560/93‑1 (MQ=255)
                          tATTCGCTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTg                                                               >  2:6260796/1‑93 (MQ=255)
                            ttCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTa                                                             >  1:2423211/1‑93 (MQ=255)
                            ttCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTa                                                             >  1:1775342/1‑93 (MQ=255)
                               gTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACt                                                          >  2:5811636/1‑93 (MQ=255)
                               gTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGCTGTaaat                                                          >  2:2100260/1‑91 (MQ=255)
                                 tACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaa                                                        <  2:8155309/93‑1 (MQ=255)
                                 tACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaa                                                        >  1:827723/1‑93 (MQ=255)
                                 tACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGAAATAGCCGTTGTAACTaa                                                        >  1:2847241/1‑93 (MQ=255)
                                  aCCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaaa                                                       <  2:5553588/93‑1 (MQ=255)
                                  aCCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTaaa                                                       >  1:2205910/1‑93 (MQ=255)
                                   ccAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAg                                                      <  2:7880918/93‑1 (MQ=255)
                                   ccAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAg                                                      <  1:3982848/93‑1 (MQ=255)
                                   ccAAAGCGGCCCAGAGAACCAATAGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAg                                                      <  2:4814332/93‑1 (MQ=255)
                                    cAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGTCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGc                                                     <  1:433770/93‑1 (MQ=255)
                                     aaaGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGcc                                                    >  2:1791765/1‑93 (MQ=255)
                                     aaaGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGcc                                                    >  1:1039818/1‑93 (MQ=255)
                                       aGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCaa                                                  <  2:8130939/93‑1 (MQ=255)
                                           gCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTc                                              >  1:5533816/1‑93 (MQ=255)
                                            cccAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCa                                             >  1:3723766/1‑93 (MQ=255)
                                             ccAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAt                                            >  1:7171981/1‑93 (MQ=255)
                                             ccAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAt                                            >  2:5052616/1‑93 (MQ=255)
                                              cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                           >  1:1115538/1‑93 (MQ=255)
                                              cAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATc                                           >  1:4176039/1‑93 (MQ=255)
                                               agagAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCt                                          <  2:1282016/93‑1 (MQ=255)
                                               agagAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCt                                          >  2:8502638/1‑93 (MQ=255)
                                               agagAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCt                                          <  1:6071095/93‑1 (MQ=255)
                                                gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCACAAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATGtt                                         >  1:6253244/1‑93 (MQ=255)
                                                gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCtt                                         <  1:1482410/93‑1 (MQ=255)
                                                gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCtt                                         >  2:7682288/1‑93 (MQ=255)
                                                gagaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCtt                                         <  2:7004388/93‑1 (MQ=255)
                                                 agaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCttt                                        >  2:2448234/1‑93 (MQ=255)
                                                 aaaaCCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCttt                                        >  2:2014055/3‑93 (MQ=255)
                                                  gaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTc                                       >  2:2205786/1‑93 (MQ=255)
                                                  gaACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTc                                       >  2:4934598/1‑93 (MQ=255)
                                                   aaCCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTca                                      <  2:8783551/93‑1 (MQ=255)
                                                   aaCCAATCGCCCATGATTTAGGTGAACCATGAGAGCCGGCCCCCCAACCAGAACGGTAATAACCGTTGTAACTAAAGCCAATTTCATCttgcc                                      >  1:6729604/1‑90 (MQ=255)
                                                    aCCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTcac                                     >  1:3115295/1‑93 (MQ=255)
                                                        aTCTCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAt                                 <  1:4991547/93‑1 (MQ=255)
                                                        aTCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAt                                 >  1:6414144/1‑93 (MQ=255)
                                                        aTCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAt                                 >  1:585119/1‑93 (MQ=255)
                                                         tCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAtt                                >  1:2168202/1‑93 (MQ=255)
                                                           gCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTa                              >  1:8664242/1‑93 (MQ=255)
                                                            cccATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAc                             >  2:4581861/1‑93 (MQ=255)
                                                            cccATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAc                             <  1:2591124/93‑1 (MQ=255)
                                                             ccATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACt                            <  2:6391172/93‑1 (MQ=255)
                                                              cATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTTACAAATTTACTg                           >  1:4772864/1‑93 (MQ=255)
                                                              cATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTg                           >  2:539117/1‑93 (MQ=255)
                                                                tGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGaa                         <  1:129542/93‑1 (MQ=255)
                                                                 gATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGaaa                        <  2:8448177/93‑1 (MQ=255)
                                                                   tttAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATc                      >  2:308801/1‑93 (MQ=255)
                                                                      aGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCttt                   <  1:5625531/93‑1 (MQ=255)
                                                                      aGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCttt                   >  2:524721/1‑93 (MQ=255)
                                                                      aGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCttt                   <  1:7299879/93‑1 (MQ=255)
                                                                       ggTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTc                  <  2:3358114/93‑1 (MQ=255)
                                                                        gTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCa                 >  1:6601153/1‑93 (MQ=255)
                                                                         ggAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCag                <  1:6775790/92‑1 (MQ=255)
                                                                          gAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCaga               <  1:5298142/93‑1 (MQ=255)
                                                                           aaCCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTGGTAACTAAAGCCAATTTCATCTTTCACAAATTGGCTGAAAGCTTTCagag              <  2:4295611/93‑1 (MQ=255)
                                                                              cATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCa           >  1:2251446/1‑93 (MQ=255)
                                                                              cATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCa           <  1:1948883/93‑1 (MQ=255)
                                                                               aTGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAt          <  2:8607423/93‑1 (MQ=255)
                                                                               aTGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAt          >  2:5755110/1‑93 (MQ=255)
                                                                               aTGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAt          >  2:2716816/1‑93 (MQ=255)
                                                                                tGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATg         <  1:4923322/93‑1 (MQ=255)
                                                                                   gagGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGgaa      >  1:762231/1‑93 (MQ=255)
                                                                                       cGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAAt  <  1:80274/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAAT  >  NC_000913/3899350‑3899529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  NC_000913/3899348‑3899533
                                                                                            |                                                                                             
TTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCC                                                                                              <  SRR4302541.3334922/94‑1 (MQ=60)
TTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCC                                                                                              <  SRR4302541.2442377/94‑1 (MQ=60)
 TTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCC                                                                                             <  SRR4302541.3748924/94‑1 (MQ=60)
  TTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCC                                                                                            >  SRR4302541.4290870/1‑94 (MQ=60)
  TTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCC                                                                                            <  SRR4302541.2999525/94‑1 (MQ=60)
   TAACTGCAAATCAAACCAGCCGGAGTATACGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCC                                                                                           >  SRR4302541.6410454/1‑94 (MQ=60)
     ACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCA                                                                                         >  SRR4302541.6221435/1‑94 (MQ=60)
     ACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCA                                                                                         <  SRR4302541.6877182/94‑1 (MQ=60)
     ACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCA                                                                                         >  SRR4302541.3883005/1‑94 (MQ=60)
       TGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCACC                                                                                       >  SRR4302541.6486653/1‑94 (MQ=60)
        GCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACC                                                                                      >  SRR4302541.7411924/1‑94 (MQ=60)
        GCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACC                                                                                      >  SRR4302541.2889328/1‑94 (MQ=60)
          AAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAG                                                                                    <  SRR4302541.7722156/94‑1 (MQ=60)
          AAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAAACAG                                                                                    >  SRR4302541.2281180/1‑94 (MQ=60)
            ATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAA                                                                                  <  SRR4302541.1978157/94‑1 (MQ=60)
             acaacCCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAGCCATGAGAGGCGGCCCCCCAACCAGAAC                                                                                 <  SRR4302541.7829846/89‑1 (MQ=60)
             TCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAAC                                                                                 >  SRR4302541.513097/1‑94 (MQ=60)
             TCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCAAACCAGAAC                                                                                 <  SRR4302541.8453501/94‑1 (MQ=60)
             ACAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAAC                                                                                 <  SRR4302541.2573666/94‑1 (MQ=60)
              CAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACG                                                                                <  SRR4302541.6078491/94‑1 (MQ=60)
              CAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACG                                                                                >  SRR4302541.6459108/1‑94 (MQ=60)
              CAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACG                                                                                <  SRR4302541.1729316/94‑1 (MQ=60)
               AAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGG                                                                               >  SRR4302541.4027973/1‑94 (MQ=60)
               AAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGG                                                                               >  SRR4302541.2271882/1‑94 (MQ=60)
                AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGT                                                                              <  SRR4302541.5347308/94‑1 (MQ=60)
                AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGT                                                                              <  SRR4302541.3904783/94‑1 (MQ=60)
                AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGT                                                                              <  SRR4302541.6262217/94‑1 (MQ=60)
                AACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGA                                                                              >  SRR4302541.4038793/1‑94 (MQ=60)
                 ACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTA                                                                             >  SRR4302541.7247983/1‑94 (MQ=60)
                  CCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAA                                                                            >  SRR4302541.6651695/1‑94 (MQ=60)
                   CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAT                                                                           <  SRR4302541.925790/94‑1 (MQ=60)
                   CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAT                                                                           <  SRR4302541.8411142/94‑1 (MQ=60)
                   CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAT                                                                           <  SRR4302541.925791/94‑1 (MQ=60)
                   CAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAAT                                                                           >  SRR4302541.327864/1‑94 (MQ=60)
                     GCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAG                                                                         <  SRR4302541.280647/94‑1 (MQ=60)
                     GCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAG                                                                         <  SRR4302541.1871977/94‑1 (MQ=60)
                     GCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAG                                                                         <  SRR4302541.419962/94‑1 (MQ=60)
                     GCCGGAGTATTCGTGACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAG                                                                         <  SRR4302541.7853224/94‑1 (MQ=60)
                      CCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGCTTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGC                                                                        >  SRR4302541.8044746/1‑94 (MQ=60)
                      CCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGC                                                                        <  SRR4302541.7821541/94‑1 (MQ=60)
                       CGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCC                                                                       >  SRR4302541.2828189/1‑94 (MQ=60)
                       CGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCC                                                                       >  SRR4302541.7159104/1‑94 (MQ=60)
                       CGGAGGATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGGAATAGCC                                                                       <  SRR4302541.4068644/94‑1 (MQ=60)
                        GGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCG                                                                      >  SRR4302541.133296/1‑94 (MQ=60)
                        GGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCG                                                                      >  SRR4302541.2909419/1‑94 (MQ=60)
                        GGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGAAATAGCCG                                                                      >  SRR4302541.6561554/1‑94 (MQ=60)
                        GGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGACCCCCAACCAGAACGGTAATAGCCG                                                                      >  SRR4302541.1564177/1‑94 (MQ=60)
                         GAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGT                                                                     <  SRR4302541.2894848/94‑1 (MQ=60)
                          AGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTT                                                                    <  SRR4302541.4721284/94‑1 (MQ=60)
                          AGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTT                                                                    <  SRR4302541.4940783/94‑1 (MQ=60)
                           GTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACTATGAGAGGCGGCACCCCAACCAGAACGGCAATAGCCGTTG                                                                   >  SRR4302541.6073116/1‑94 (MQ=60)
                           GTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTT                                                                   >  SRR4302541.4206502/1‑94 (MQ=60)
                            TATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGT                                                                  >  SRR4302541.2938797/1‑94 (MQ=60)
                            TATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGT                                                                  >  SRR4302541.5658741/1‑94 (MQ=60)
                            TATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGT                                                                  <  SRR4302541.797067/94‑1 (MQ=60)
                            TATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGT                                                                  >  SRR4302541.3260945/1‑94 (MQ=60)
                            TATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCAGTTGA                                                                  >  SRR4302541.2938796/1‑94 (MQ=60)
                             ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTA                                                                 <  SRR4302541.8203003/94‑1 (MQ=60)
                             ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTA                                                                 >  SRR4302541.2447138/1‑94 (MQ=60)
                             ATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTA                                                                 >  SRR4302541.1792588/1‑94 (MQ=60)
                                CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACT                                                              >  SRR4302541.5394143/1‑94 (MQ=60)
                                CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACT                                                              >  SRR4302541.4818353/1‑94 (MQ=60)
                                CGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACT                                                              <  SRR4302541.4903003/94‑1 (MQ=60)
                                  TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAA                                                            <  SRR4302541.4305856/94‑1 (MQ=60)
                                  TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAA                                                            <  SRR4302541.4274310/94‑1 (MQ=60)
                                  TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAA                                                            <  SRR4302541.2689714/94‑1 (MQ=60)
                                  TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAA                                                            >  SRR4302541.835247/1‑94 (MQ=60)
                                  TTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGAAATAGCCGTTGTAACTAA                                                            >  SRR4302541.2875873/1‑94 (MQ=60)
                                   TACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAA                                                           >  SRR4302541.503593/1‑94 (MQ=60)
                                   TACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAA                                                           >  SRR4302541.2227282/1‑94 (MQ=60)
                                    TCCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCAAGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAG                                                          <  SRR4302541.5242973/94‑1 (MQ=60)
                                    ACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAG                                                          <  SRR4302541.719801/94‑1 (MQ=60)
                                    ACCAAAGCGGCCCAGAGAACCAAGCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAG                                                          <  SRR4302541.4408480/94‑1 (MQ=60)
                                     CCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGC                                                         <  SRR4302541.4022323/94‑1 (MQ=60)
                                     CCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGC                                                         <  SRR4302541.1938487/94‑1 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGTCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCC                                                        <  SRR4302541.437853/94‑1 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCC                                                        >  SRR4302541.1049455/1‑94 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCC                                                        <  SRR4302541.3225939/94‑1 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCC                                                        >  SRR4302541.7846944/1‑94 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCC                                                        >  SRR4302541.2732328/1‑94 (MQ=60)
                                      CAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCA                                                        >  SRR4302541.6866058/1‑94 (MQ=60)
                                        AAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAA                                                      <  SRR4302541.4547947/94‑1 (MQ=60)
                                        AAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAA                                                      >  SRR4302541.7556388/1‑94 (MQ=60)
                                         AGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAT                                                     <  SRR4302541.251666/94‑1 (MQ=60)
                                         AGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAT                                                     <  SRR4302541.5835988/94‑1 (MQ=60)
                                         AGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAAT                                                     <  SRR4302541.2648579/94‑1 (MQ=60)
                                            GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTC                                                  <  SRR4302541.1467262/94‑1 (MQ=60)
                                            GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTC                                                  >  SRR4302541.5590464/1‑94 (MQ=60)
                                            GGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTC                                                  >  SRR4302541.6378400/1‑94 (MQ=60)
                                             GCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCA                                                 >  SRR4302541.3761287/1‑94 (MQ=60)
                                              CCCAGAGAACTAATCGCCCATGATTTAGGTGAACGATGAGAGGCGGCCCCCCAACCAGAACGGTATTAGCCGTTGTAACTAAAGCCAATTTCAT                                                <  SRR4302541.1968498/94‑1 (MQ=60)
                                              CCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAT                                                >  SRR4302541.7248446/1‑94 (MQ=60)
                                              CCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAT                                                >  SRR4302541.5821359/1‑94 (MQ=60)
                                              CCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAT                                                <  SRR4302541.1968497/94‑1 (MQ=60)
                                              CCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCAT                                                >  SRR4302541.1073410/1‑94 (MQ=60)
                                               CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATT                                               >  SRR4302541.2221651/1‑94 (MQ=60)
                                               CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATC                                               >  SRR4302541.4217456/1‑94 (MQ=60)
                                               CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATC                                               <  SRR4302541.8873998/94‑1 (MQ=60)
                                               CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATC                                               >  SRR4302541.1126021/1‑94 (MQ=60)
                                               CCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATC                                               >  SRR4302541.5013788/1‑94 (MQ=60)
                                                CAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCT                                              >  SRR4302541.6918886/1‑94 (MQ=60)
                                                 AGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCCACAAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATGTT                                             >  SRR4302541.6317118/1‑94 (MQ=60)
                                                 AGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTT                                             <  SRR4302541.6133084/94‑1 (MQ=60)
                                                 AGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTT                                             >  SRR4302541.6818249/1‑94 (MQ=60)
                                                  GAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTT                                            <  SRR4302541.1496979/94‑1 (MQ=60)
                                                   AGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTC                                           >  SRR4302541.6012689/1‑94 (MQ=60)
                                                   AGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTC                                           <  SRR4302541.5070410/94‑1 (MQ=60)
                                                    GAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCA                                          <  SRR4302541.7788223/94‑1 (MQ=60)
                                                    GAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCA                                          <  SRR4302541.5352284/94‑1 (MQ=60)
                                                    GAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCA                                          >  SRR4302541.6801427/1‑94 (MQ=60)
                                                    GAACCAATCGCCCATGATTTAGGTGAACCATGAGAGCCGGCCCCCCAACCAGAACGGTAATAACCGTTGTAACTAAAGCCAATTTCATCTTgcc                                          >  SRR4302541.6801429/1‑91 (MQ=60)
                                                     AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCTCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCAC                                         <  SRR4302541.8170645/94‑1 (MQ=60)
                                                     AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302541.8461047/1‑94 (MQ=60)
                                                     AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCAC                                         >  SRR4302541.3146829/1‑94 (MQ=60)
                                                     AACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCAC                                         <  SRR4302541.2090022/94‑1 (MQ=60)
                                                      ACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACA                                        >  SRR4302541.6080539/1‑94 (MQ=60)
                                                      ACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACA                                        >  SRR4302541.3393698/1‑94 (MQ=60)
                                                       CCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAA                                       >  SRR4302541.6439876/1‑94 (MQ=60)
                                                         AATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     <  SRR4302541.6811492/94‑1 (MQ=60)
                                                         AATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     >  SRR4302541.1379976/1‑94 (MQ=60)
                                                         AATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     >  SRR4302541.590633/1‑94 (MQ=60)
                                                         AATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAT                                     >  SRR4302541.6479558/1‑94 (MQ=60)
                                                          ATCTCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302541.5042791/94‑1 (MQ=60)
                                                          ATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302541.1124015/94‑1 (MQ=60)
                                                          ATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    >  SRR4302541.2189165/1‑94 (MQ=60)
                                                          ATCGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATT                                    <  SRR4302541.5516126/94‑1 (MQ=60)
                                                            CGCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTA                                  >  SRR4302541.8756973/1‑94 (MQ=60)
                                                             GCCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTAC                                 <  SRR4302541.1235283/94‑1 (MQ=60)
                                                              CCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTTCT                                <  SRR4302541.8771881/94‑1 (MQ=60)
                                                              CCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302541.4816046/94‑1 (MQ=60)
                                                              CCCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACT                                <  SRR4302541.2617089/94‑1 (MQ=60)
                                                               CCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTTACAAATTTACTG                               >  SRR4302541.4821601/1‑94 (MQ=60)
                                                               CCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               <  SRR4302541.2871417/94‑1 (MQ=60)
                                                               CCATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTGGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTG                               <  SRR4302541.2415240/94‑1 (MQ=60)
                                                                 ATGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAA                             <  SRR4302541.2038832/94‑1 (MQ=60)
                                                                  TGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAA                            <  SRR4302541.130563/94‑1 (MQ=60)
                                                                  TGATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAAATTACTGAAA                            >  SRR4302541.6252964/1‑94 (MQ=60)
                                                                   GATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAAT                           <  SRR4302541.59357/94‑1 (MQ=60)
                                                                    ATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATC                          <  SRR4302541.8425696/94‑1 (MQ=60)
                                                                    ATTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAAAACGGAAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATT                          >  SRR4302541.7102422/1‑94 (MQ=60)
                                                                     TTTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCT                         <  SRR4302541.8590909/94‑1 (MQ=60)
                                                                     ATTAGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCT                         <  SRR4302541.6701167/94‑1 (MQ=60)
                                                                       TAGGTGAACCATGAGAGGCGGCCCCCCAACCAGCACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTT                       <  SRR4302541.8564882/94‑1 (MQ=60)
                                                                        AGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302541.7377793/94‑1 (MQ=60)
                                                                        AGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302541.5683084/94‑1 (MQ=60)
                                                                        AGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302541.8081702/94‑1 (MQ=60)
                                                                        AGGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTC                      <  SRR4302541.2235920/94‑1 (MQ=60)
                                                                         GGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     >  SRR4302541.6668764/1‑94 (MQ=60)
                                                                         GGTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCA                     <  SRR4302541.561254/94‑1 (MQ=60)
                                                                          GTGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAG                    <  SRR4302541.7462416/94‑1 (MQ=60)
                                                                           GGAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGA                   <  SRR4302541.6848259/94‑1 (MQ=60)
                                                                            GAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAG                  <  SRR4302541.507640/94‑1 (MQ=60)
                                                                            GAACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAG                  <  SRR4302541.5352672/94‑1 (MQ=60)
                                                                             AACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGT                 <  SRR4302541.3764722/94‑1 (MQ=60)
                                                                              ACCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTC                <  SRR4302541.2190608/94‑1 (MQ=60)
                                                                               CCATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCA               >  SRR4302541.2273197/1‑94 (MQ=60)
                                                                                CATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAT              <  SRR4302541.1967666/94‑1 (MQ=60)
                                                                                CATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCAT              >  SRR4302541.2259668/1‑94 (MQ=60)
                                                                                 ATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTATCTTAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATG             <  SRR4302541.7355910/94‑1 (MQ=60)
                                                                                 ATGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATG             <  SRR4302541.5829309/94‑1 (MQ=60)
                                                                                  TGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302541.931419/94‑1 (MQ=60)
                                                                                  TGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302541.4973556/94‑1 (MQ=60)
                                                                                  TGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302541.4884657/94‑1 (MQ=60)
                                                                                  AGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302541.3559064/94‑1 (MQ=60)
                                                                                  AGAGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGG            <  SRR4302541.931420/94‑1 (MQ=60)
                                                                                    AGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          >  SRR4302541.769386/1‑94 (MQ=60)
                                                                                    AGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          >  SRR4302541.1191645/1‑94 (MQ=60)
                                                                                    AGAGGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGCAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          <  SRR4302541.6409185/94‑1 (MQ=60)
                                                                                    AGAGACGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAATCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAA          <  SRR4302541.1976008/94‑1 (MQ=60)
                                                                                       GGCGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAA       >  SRR4302541.7312299/1‑94 (MQ=60)
                                                                                         CGGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATA     <  SRR4302541.80962/94‑1 (MQ=60)
                                                                                          GGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAA    >  SRR4302541.4169058/1‑94 (MQ=60)
                                                                                          GGCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAA    >  SRR4302541.3105026/1‑94 (MQ=60)
                                                                                           GCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAA   <  SRR4302541.3283234/94‑1 (MQ=60)
                                                                                           GCCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAA   >  SRR4302541.1635868/1‑94 (MQ=60)
                                                                                            CCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  SRR4302541.1211482/1‑94 (MQ=60)
                                                                                            |                                                                                             
TTTTAACTGCAAATCAAACCAGCCGGAGTATTCGTTACCAAAGCGGCCCAGAGAACCAATCGCCCATGATTTAGGTGAACCATGAGAGGCGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAAT  >  NC_000913/3899348‑3899533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑