Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,896,435 |
G→A |
A196V (GCG→GTG) |
b3718 ← |
putative isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,896,435 | 0 | G | A | 100.0%
| 809.1
/ NA
| 211 | A196V (GCG→GTG) | b3718 | putative isomerase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (118/93); total (118/93) |
Only 100 of 224 total aligned reads displayed.
ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG > NC_000913/3896345‑3896524
|
aTCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCcacg > 2:3163538/1‑93 (MQ=255)
tCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCacgc > 2:875982/1‑93 (MQ=255)
cAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAcgcc < 2:1946671/93‑1 (MQ=255)
aGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAcgccg > 2:3294608/1‑93 (MQ=255)
gCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTTCCCAcgccgc < 1:1655285/93‑1 (MQ=255)
gAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTg > 2:4765752/1‑93 (MQ=255)
aaGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGa < 1:3540223/93‑1 (MQ=255)
aGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAc > 2:5781234/1‑93 (MQ=255)
aGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAc > 2:6137764/1‑93 (MQ=255)
aGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAc > 1:2393831/1‑93 (MQ=255)
ggATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACa > 2:3691945/1‑93 (MQ=255)
cAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTAt > 1:4805128/1‑93 (MQ=255)
aGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATc < 1:1596066/93‑1 (MQ=255)
aGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATc < 1:327255/93‑1 (MQ=255)
gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCa > 2:5118290/1‑93 (MQ=255)
gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCa > 2:594163/1‑93 (MQ=255)
gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCa > 2:3579807/1‑93 (MQ=255)
gCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCa > 2:1426603/1‑93 (MQ=255)
cTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAg < 2:591589/93‑1 (MQ=255)
gCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCa > 1:2850019/1‑93 (MQ=255)
cAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCaa < 2:4387377/93‑1 (MQ=255)
acacGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGt < 1:4970837/93‑1 (MQ=255)
cacGGAAGCTGGAACATCTTCGGTAACCGGACATTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGtt < 1:1410035/93‑1 (MQ=255)
acGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttt < 2:1954845/93‑1 (MQ=255)
acGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttt < 1:2491121/93‑1 (MQ=255)
acGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttt < 1:2101691/93‑1 (MQ=255)
ggAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttttt > 1:5647417/1‑93 (MQ=255)
ggAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGttttt < 1:4853873/93‑1 (MQ=255)
gAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTc < 2:3349387/93‑1 (MQ=255)
gAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTc > 2:5876258/1‑93 (MQ=255)
aaGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcg < 1:812746/93‑1 (MQ=255)
aGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgc > 1:1099547/1‑93 (MQ=255)
gCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgcc < 2:4263163/93‑1 (MQ=255)
cTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgccg > 2:4615627/1‑93 (MQ=255)
cTGGAACATCTTCGGCAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgccc > 1:6350024/1‑92 (MQ=255)
tGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCGTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTcgccgc > 2:1513436/1‑93 (MQ=255)
ggAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcc < 1:4368059/93‑1 (MQ=255)
ggAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcc > 1:1833575/1‑93 (MQ=255)
ggAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcc > 1:509615/1‑93 (MQ=255)
ggAACATCGTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCgccgcc > 1:6293141/1‑93 (MQ=255)
gAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCa > 1:5276446/1‑93 (MQ=255)
cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatga > 1:5664743/1‑93 (MQ=255)
cATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatga < 2:3002280/93‑1 (MQ=255)
tCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCatgatg > 2:2449007/1‑93 (MQ=255)
ttCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCt < 2:2098779/93‑1 (MQ=255)
tCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtt < 1:406819/93‑1 (MQ=255)
tCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtt < 1:3689059/93‑1 (MQ=255)
cGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCttt < 1:59525/93‑1 (MQ=255)
cGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCttt < 2:1278484/93‑1 (MQ=255)
ggTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtttt > 2:558769/1‑93 (MQ=255)
ggTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtttt < 1:5762113/93‑1 (MQ=255)
ggTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCtttt > 1:3178287/1‑93 (MQ=255)
gTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTc > 2:6385032/1‑93 (MQ=255)
gTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTc < 2:1752697/93‑1 (MQ=255)
tAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCg > 2:25276/1‑93 (MQ=255)
aCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGc < 1:5813487/93‑1 (MQ=255)
aCCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGc > 1:6024633/1‑93 (MQ=255)
ccGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcc > 2:673289/1‑93 (MQ=255)
ccGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcc < 1:2773911/93‑1 (MQ=255)
cGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGccc > 1:5446706/1‑93 (MQ=255)
cGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGccc > 2:2141957/1‑93 (MQ=255)
ggACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcccc < 2:505711/93‑1 (MQ=255)
ggACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGcccc > 1:3954367/1‑93 (MQ=255)
ggACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGCTTTTCGCCGCCATGATGCTTTTCCGcccc > 2:4149793/1‑93 (MQ=255)
gACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCa < 1:923176/93‑1 (MQ=255)
aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt > 1:2349879/1‑93 (MQ=255)
aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt > 2:4071139/1‑93 (MQ=255)
aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt < 1:3729827/93‑1 (MQ=255)
aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt > 1:1541640/1‑93 (MQ=255)
aCCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAt < 1:5884876/93‑1 (MQ=255)
ttGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGt < 2:3851888/93‑1 (MQ=255)
ttGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGt > 1:4317401/1‑93 (MQ=255)
cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc < 1:6392756/93‑1 (MQ=255)
cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc > 2:2727642/1‑93 (MQ=255)
cAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCAc < 1:1377226/93‑1 (MQ=255)
aGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg < 2:3891980/93‑1 (MQ=255)
aGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACg > 1:6181285/1‑93 (MQ=255)
gAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGt > 2:2396619/1‑93 (MQ=255)
gAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGt < 1:3709442/93‑1 (MQ=255)
aaCATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTa < 2:145762/93‑1 (MQ=255)
aCATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAg > 1:4604004/1‑93 (MQ=255)
cATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTGTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGc < 2:6033918/93‑1 (MQ=255)
tttCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTc < 2:6431677/93‑1 (MQ=255)
tttCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTATc < 2:5251616/93‑1 (MQ=255)
tCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAg < 1:2472267/93‑1 (MQ=255)
gTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCa < 1:3039367/93‑1 (MQ=255)
gTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCa < 1:2224830/93‑1 (MQ=255)
gTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCa > 2:2888923/1‑93 (MQ=255)
gCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACt < 1:4020662/93‑1 (MQ=255)
gCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACt > 2:1484257/1‑93 (MQ=255)
gCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACt > 1:1916471/1‑93 (MQ=255)
tGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAAc < 1:4456791/93‑1 (MQ=255)
gcgcTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACg < 2:227140/93‑1 (MQ=255)
gcTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGaa > 1:4738649/1‑93 (MQ=255)
ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg < 2:512291/93‑1 (MQ=255)
ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg > 2:5428443/1‑93 (MQ=255)
ttACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAg > 2:2115927/1‑93 (MQ=255)
tACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGt > 1:1327272/1‑93 (MQ=255)
aCCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTc < 1:673289/93‑1 (MQ=255)
aCCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTc > 1:4702373/1‑93 (MQ=255)
|
ATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG > NC_000913/3896345‑3896524
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGC > NC_000913/3896343‑3896528
|
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAC < SRR4302534.664881/94‑1 (MQ=60)
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAC < SRR4302534.265473/94‑1 (MQ=60)
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAC > SRR4302534.2746877/1‑94 (MQ=60)
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCAC > SRR4302534.6247729/1‑94 (MQ=60)
CAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCG < SRR4302534.4980482/94‑1 (MQ=60)
CAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCG > SRR4302534.6518918/1‑94 (MQ=60)
GCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTTCCCACGCCGCT < SRR4302534.1698423/94‑1 (MQ=60)
GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA > SRR4302534.6127323/1‑94 (MQ=60)
GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA > SRR4302534.1745736/1‑94 (MQ=60)
GAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGA > SRR4302534.3778387/1‑94 (MQ=60)
AAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAC > SRR4302534.1446061/1‑94 (MQ=60)
AAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAC > SRR4302534.2457439/1‑94 (MQ=60)
AAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGAC < SRR4302534.3635455/94‑1 (MQ=60)
ATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATT > SRR4302534.3499012/1‑94 (MQ=60)
ATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATT < SRR4302534.5611004/94‑1 (MQ=60)
TGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTA < SRR4302534.1519478/94‑1 (MQ=60)
GCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTAT > SRR4302534.4935595/1‑94 (MQ=60)
CAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATC > SRR4302534.4942939/1‑94 (MQ=60)
CAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATC > SRR4302534.2529342/1‑94 (MQ=60)
AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA < SRR4302534.1637772/94‑1 (MQ=60)
AGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCA < SRR4302534.335671/94‑1 (MQ=60)
GCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAG < SRR4302534.6100868/94‑1 (MQ=60)
TGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCA > SRR4302534.3813297/1‑94 (MQ=60)
TGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCA > SRR4302534.2924880/1‑94 (MQ=60)
CAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAG > SRR4302534.4733538/1‑94 (MQ=60)
ACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTT < SRR4302534.5105413/94‑1 (MQ=60)
ACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTT < SRR4302534.6199721/94‑1 (MQ=60)
CACGGAAGCTGGAACATCTTCGGTAACCGGACATTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTT < SRR4302534.1447127/94‑1 (MQ=60)
ACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTT < SRR4302534.2156860/94‑1 (MQ=60)
ACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTT < SRR4302534.6581380/94‑1 (MQ=60)
ACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTT < SRR4302534.2557302/94‑1 (MQ=60)
CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT > SRR4302534.290547/1‑94 (MQ=60)
CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTT > SRR4302534.5800295/1‑94 (MQ=60)
CGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTACCTGCGCTTTACCCACGCCGCTGACAATTAGCAGCAAGTTTTT < SRR4302534.2135465/94‑1 (MQ=60)
GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC < SRR4302534.2970860/94‑1 (MQ=60)
GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC < SRR4302534.4985564/94‑1 (MQ=60)
GGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTC > SRR4302534.1637225/1‑94 (MQ=60)
GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCG < SRR4302534.2553090/94‑1 (MQ=60)
GAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCG > SRR4302534.1355659/1‑94 (MQ=60)
AAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACGCACGCCGCTGACAATTATCAGCAAGTTTTTCGC > SRR4302534.1619671/1‑94 (MQ=60)
AAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGC > SRR4302534.1128191/1‑94 (MQ=60)
AAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGC < SRR4302534.833168/94‑1 (MQ=60)
AGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCC > SRR4302534.5532412/1‑94 (MQ=60)
AGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCC < SRR4302534.1387394/94‑1 (MQ=60)
GCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCG < SRR4302534.5937714/94‑1 (MQ=60)
GCTGGAACATCTTCGGCAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCC > SRR4302534.6521510/1‑94 (MQ=60)
TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC > SRR4302534.1881250/1‑94 (MQ=60)
TGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC > SRR4302534.522302/1‑94 (MQ=60)
TGGAACATCGTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCC > SRR4302534.6463386/1‑94 (MQ=60)
GGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCA < SRR4302534.4485779/94‑1 (MQ=60)
GGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCA > SRR4302534.5418923/1‑94 (MQ=60)
ACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGA > SRR4302534.5818103/1‑94 (MQ=60)
CATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGAT > SRR4302534.3153711/1‑94 (MQ=60)
ATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATG < SRR4302534.5217502/94‑1 (MQ=60)
CTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCT < SRR4302534.2179059/94‑1 (MQ=60)
TCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTT < SRR4302534.3788254/94‑1 (MQ=60)
TCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTT < SRR4302534.679062/94‑1 (MQ=60)
TCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTT < SRR4302534.417218/94‑1 (MQ=60)
CGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTT < SRR4302534.61139/94‑1 (MQ=60)
CGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTT > SRR4302534.3262227/1‑94 (MQ=60)
GGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTC < SRR4302534.2133705/94‑1 (MQ=60)
GGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTC < SRR4302534.594101/94‑1 (MQ=60)
GGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTC < SRR4302534.4902564/94‑1 (MQ=60)
GGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTC < SRR4302534.5918424/94‑1 (MQ=60)
GGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTC > SRR4302534.774646/1‑94 (MQ=60)
AACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGC > SRR4302534.6188358/1‑94 (MQ=60)
ACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCC < SRR4302534.5971270/94‑1 (MQ=60)
CCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCC < SRR4302534.2846901/94‑1 (MQ=60)
CCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCC > SRR4302534.5593455/1‑94 (MQ=60)
CCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCC > SRR4302534.3311438/1‑94 (MQ=60)
CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCC > SRR4302534.4060226/1‑94 (MQ=60)
CGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCC > SRR4302534.6267968/1‑94 (MQ=60)
GGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCA > SRR4302534.3799327/1‑94 (MQ=60)
GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT > SRR4302534.1582055/1‑94 (MQ=60)
GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT > SRR4302534.3674015/1‑94 (MQ=60)
GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT < SRR4302534.946688/94‑1 (MQ=60)
GACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCAT > SRR4302534.2412241/1‑94 (MQ=60)
ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC < SRR4302534.6044658/94‑1 (MQ=60)
ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC < SRR4302534.3830052/94‑1 (MQ=60)
ACCTTGCAGAACATTTTTCAGTGCCTGCGCTTGACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATC < SRR4302534.5916035/94‑1 (MQ=60)
CCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCG > SRR4302534.544402/1‑94 (MQ=60)
CCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCG > SRR4302534.4099226/1‑94 (MQ=60)
GTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGC > SRR4302534.4999049/1‑94 (MQ=60)
CTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGT > SRR4302534.4434304/1‑94 (MQ=60)
TTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTC > SRR4302534.3898752/1‑94 (MQ=60)
CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG < SRR4302534.1413511/94‑1 (MQ=60)
CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG < SRR4302534.6565413/94‑1 (MQ=60)
CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG > SRR4302534.6349521/1‑94 (MQ=60)
CAGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACG > SRR4302534.2458087/1‑94 (MQ=60)
AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT > SRR4302534.888809/1‑94 (MQ=60)
AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT < SRR4302534.1496888/94‑1 (MQ=60)
AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT > SRR4302534.2947184/1‑94 (MQ=60)
AGAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGT > SRR4302534.4475220/1‑94 (MQ=60)
GAACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTA < SRR4302534.3809163/94‑1 (MQ=60)
AAACATTTTTCAGTGCCTGCTCTTTACCCTCGCCGGTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTA < SRR4302534.2381253/94‑1 (MQ=60)
AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG > SRR4302534.4728946/1‑94 (MQ=60)
AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG < SRR4302534.4582529/94‑1 (MQ=60)
AACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAG > SRR4302534.6026225/1‑94 (MQ=60)
ACATTTTTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGC > SRR4302534.9946/1‑94 (MQ=60)
TTCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAG < SRR4302534.5811133/94‑1 (MQ=60)
TCAGTGCTTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGG < SRR4302534.4101706/94‑1 (MQ=60)
TCAGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGG < SRR4302534.2537969/94‑1 (MQ=60)
AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCA > SRR4302534.6527004/1‑94 (MQ=60)
AGTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCA > SRR4302534.4546890/1‑94 (MQ=60)
GTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCAC < SRR4302534.3119067/94‑1 (MQ=60)
GTGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCAC < SRR4302534.2283748/94‑1 (MQ=60)
TGCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACT > SRR4302534.1966519/1‑94 (MQ=60)
GCCTGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTA < SRR4302534.4128449/94‑1 (MQ=60)
TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG > SRR4302534.5287515/1‑94 (MQ=60)
TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG < SRR4302534.4577271/94‑1 (MQ=60)
TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG > SRR4302534.245542/1‑94 (MQ=60)
TGCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACG > SRR4302534.6406911/1‑94 (MQ=60)
GCGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGA < SRR4302534.4164000/94‑1 (MQ=60)
CGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGTCGCCATGATGCTTTTCGGCTCCATCGTCACGTAGCTGTCCGGCACTAAAGAA > SRR4302534.434387/1‑94 (MQ=60)
CGCTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAA > SRR4302534.4867300/1‑94 (MQ=60)
CTTTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAA > SRR4302534.1895060/1‑94 (MQ=60)
TTACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGT > SRR4302534.1362260/1‑94 (MQ=60)
TACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTC > SRR4302534.2582087/1‑94 (MQ=60)
TACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTC > SRR4302534.4830030/1‑94 (MQ=60)
ACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG > SRR4302534.4613658/1‑94 (MQ=60)
ACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG < SRR4302534.1642868/94‑1 (MQ=60)
ACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG < SRR4302534.689711/94‑1 (MQ=60)
ACCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCG < SRR4302534.4842052/94‑1 (MQ=60)
CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCTGCCTCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGC > SRR4302534.6644888/1‑94 (MQ=60)
CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAATGAAAAGTCGC > SRR4302534.1069656/1‑94 (MQ=60)
CCCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGC > SRR4302534.4340043/1‑94 (MQ=60)
CCACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCC > SRR4302534.6461693/1‑94 (MQ=60)
CACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCAATCGTCACGTAGCTGGCAGGCACTAACGAAAAGTCGCCG > SRR4302534.4691922/1‑94 (MQ=60)
ACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGC > SRR4302534.990907/1‑94 (MQ=60)
ACGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGC > SRR4302534.4596185/1‑94 (MQ=60)
|
CCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGC > NC_000913/3896343‑3896528
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
