Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,935,895	A→G	T15A (ACC→GCC)	rbsR →	RbsR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,935,895	0	A	G	99.1%	1092.6 / ‑3.5	319	T15A (ACC→GCC)	rbsR	RbsR
Reads supporting (aligned to +/- strand): ref base A (0/2); major base G (149/165); minor base T (3/0); total (152/167)
Fisher's exact test for biased strand distribution p-value = 1.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.45e-01

Only 100 of 333 total aligned reads displayed.

CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT  >  NC_000913/3935805‑3935984

ccGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGcc                                                                                         <  1:4842620/93‑1 (MQ=255)

ccGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGGGACGCTTGGCTAAAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGcc                                                                                         >  2:7531709/1‑93 (MQ=255)

 cGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCACCTGGCGGGCGTTTCTGCCt                                                                                        >  2:2587504/1‑93 (MQ=255)

  gTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTc                                                                                       <  2:8017547/93‑1 (MQ=255)

  gTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTc                                                                                       <  2:3222269/93‑1 (MQ=255)

   tGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCa                                                                                      >  1:948681/1‑93 (MQ=255)

   tGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCa                                                                                      >  2:5136320/1‑93 (MQ=255)

    ggCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCaa                                                                                     <  2:6805202/93‑1 (MQ=255)

    ggCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCaa                                                                                     <  2:4304858/93‑1 (MQ=255)

      cGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACa                                                                                   <  2:4820921/93‑1 (MQ=255)

      cGTGAAGAGATCGACGCATGTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACa                                                                                   <  1:6527904/93‑1 (MQ=255)

        tGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGt                                                                                 >  1:6992409/1‑93 (MQ=255)

        tGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGt                                                                                 <  2:6721098/93‑1 (MQ=255)

        tGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGt                                                                                 >  2:28570/1‑93 (MQ=255)

         gAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGtt                                                                                <  1:4483733/93‑1 (MQ=255)

          aaGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGttt                                                                               <  1:5147256/93‑1 (MQ=255)

           agagATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCATCAACAGtttt                                                                              >  1:7719336/1‑92 (MQ=255)

              gaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACCGTTTCTCa                                                                           >  2:746128/1‑93 (MQ=255)

              gaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCa                                                                           >  1:7898703/1‑93 (MQ=255)

               aTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAc                                                                          >  1:8550054/1‑93 (MQ=255)

               aTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCACGCATGGCGGGCGTTTCTGCCTCAACAGTTTCTCag                                                                          >  1:4313701/1‑92 (MQ=255)

                tCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACg                                                                         >  2:7909494/1‑93 (MQ=255)

                tCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACg                                                                         <  1:504435/93‑1 (MQ=255)

                 cGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGt                                                                        >  1:4107003/1‑93 (MQ=255)

                  gACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGtt                                                                       >  1:6113894/1‑93 (MQ=255)

                   aCGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTa                                                                      >  2:3862876/1‑93 (MQ=255)

                    cGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTAt                                                                     <  2:6036038/93‑1 (MQ=255)

                    cGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTAt                                                                     <  2:2041577/93‑1 (MQ=255)

                    cGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTAt                                                                     >  2:2237531/1‑93 (MQ=255)

                    cGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTAt                                                                     >  2:3407082/1‑93 (MQ=255)

                     gCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATc                                                                    >  2:5734484/1‑93 (MQ=255)

                      taTTTTTAGACAGGCAGTGGTGACGCTTGGCTACAATGAAAGATGGTGCCCGCCTGGCGGGCGTTTCTGCCTCTACAGTTGCTCACTTTATCa                                                                   >  2:7809420/2‑93 (MQ=255)

                      cATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCa                                                                   >  1:983498/1‑93 (MQ=255)

                         ttttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATa                                                                <  2:1083805/93‑1 (MQ=255)

                          tttAGACAGGGAGGGGTTAGTCTTGACTACAATGAAAGATGTGGCCGGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATaa                                                               <  1:1795121/93‑1 (MQ=255)

                          tgtAGACAGACAGAGGTGATGCTTGGATACAATGAAAGTTGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACATTTTCTCACGTTATCAATaa                                                               <  2:6157443/91‑1 (MQ=255)

                           ttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATaaa                                                              >  2:854724/1‑93 (MQ=255)

                            tAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAg                                                             <  1:4790968/93‑1 (MQ=255)

                            tAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAg                                                             >  2:7757617/1‑93 (MQ=255)

                            tAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAg                                                             <  2:621356/93‑1 (MQ=255)

                             aGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGa                                                            <  2:813466/93‑1 (MQ=255)

                              gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGAt                                                           <  1:6891054/93‑1 (MQ=255)

                               aCAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATc                                                          >  1:2603061/1‑93 (MQ=255)

                                 aGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGc                                                        <  1:4022734/93‑1 (MQ=255)

                                  ggCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCt                                                       >  2:8290736/1‑93 (MQ=255)

                                    cAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTc                                                     <  2:4893992/93‑1 (MQ=255)

                                    cAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTc                                                     <  1:2474128/93‑1 (MQ=255)

                                     agagGTGACGCTTGTCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCg                                                    <  1:1221765/93‑1 (MQ=255)

                                      gagGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGt                                                   >  2:7629872/1‑93 (MQ=255)

                                      gagGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGt                                                   >  1:632710/1‑93 (MQ=255)

                                      gagGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGt                                                   >  1:3004736/1‑93 (MQ=255)

                                        ggTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCa                                                 >  1:1272011/1‑93 (MQ=255)

                                        ggTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTATCACGTTATCAATAAAGATCGCTTCGTCa                                                 <  1:8330748/93‑1 (MQ=255)

                                          tGACGCTTAGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGt                                               <  1:7384209/93‑1 (MQ=255)

                                           gACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTg                                              <  1:2241414/93‑1 (MQ=255)

                                             cGCTTGCCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGaa                                            <  2:5515627/93‑1 (MQ=255)

                                              gCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAg                                           >  1:704296/1‑93 (MQ=255)

                                              gCTTGGCTACAATGAAAGATGTTGCCCGCCTGCCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAg                                           <  2:4430734/93‑1 (MQ=255)

                                              ccTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCCCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAg                                           <  1:543520/92‑1 (MQ=255)

                                               cTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATCAAGATCGCTTCGTCAGTGAAGc                                          >  2:4091021/1‑93 (MQ=255)

                                               cTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGc                                          <  2:1818673/93‑1 (MQ=255)

                                               cTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGc                                          <  1:6416434/93‑1 (MQ=255)

                                               cTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGc                                          <  1:1588319/93‑1 (MQ=255)

                                                ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCg                                         <  2:3004816/93‑1 (MQ=255)

                                                ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCg                                         >  1:6199594/1‑93 (MQ=255)

                                                ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCg                                         >  2:1272788/1‑93 (MQ=255)

                                                ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCg                                         >  1:5585238/1‑93 (MQ=255)

                                                 tGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGa                                        >  1:3269204/1‑93 (MQ=255)

                                                 tGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGa                                        <  1:3893847/93‑1 (MQ=255)

                                                  ggCTACAATGAAAGATGTTGCCCGACTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAt                                       <  1:1011800/93‑1 (MQ=255)

                                                   gCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAtt                                      >  2:5036447/1‑93 (MQ=255)

                                                      aCAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAcc                                   <  1:2388053/93‑1 (MQ=255)

                                                      aCAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAcc                                   >  1:5775743/1‑93 (MQ=255)

                                                       cAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCg                                  >  2:1767206/1‑93 (MQ=255)

                                                          tGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACTTTATCAATAAAGAACGCTTCGTCAGTGAACCGATTAccacca                               >  1:1118737/1‑93 (MQ=255)

                                                          tGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCa                               >  2:648340/1‑93 (MQ=255)

                                                          tGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCa                               >  2:2690653/1‑93 (MQ=255)

                                                                   ttGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAg                      <  2:643399/93‑1 (MQ=255)

                                                                    tGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgc                     <  1:4657280/93‑1 (MQ=255)

                                                                    tGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgc                     <  1:3719091/93‑1 (MQ=255)

                                                                    tGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgc                     >  2:8375464/1‑93 (MQ=255)

                                                                      cccGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcgg                   >  1:6765602/1‑93 (MQ=255)

                                                                        cGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcggcg                 >  1:8178330/1‑93 (MQ=255)

                                                                         gCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGa                >  2:6411618/1‑93 (MQ=255)

                                                                         gCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGa                >  2:7264082/1‑93 (MQ=255)

                                                                         gCCTGGCGCTCGTTTCTGCCGTAACAGTGTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTGCCGCCAAAGTTGAAGCGGCGa                <  2:5240888/93‑1 (MQ=255)

                                                                           cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt              >  2:1355528/1‑93 (MQ=255)

                                                                           cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt              >  2:235975/1‑93 (MQ=255)

                                                                           cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt              >  2:2168142/1‑93 (MQ=255)

                                                                           cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt              >  1:72900/1‑93 (MQ=255)

                                                                             ggcgggcgTTTCTTCCTCAACAGTTTATCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaa            >  2:7388532/1‑93 (MQ=255)

                                                                             ggcgggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaa            >  2:8641425/1‑93 (MQ=255)

                                                                              gcgggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaaa           <  2:6956071/93‑1 (MQ=255)

                                                                                 ggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGaa        <  2:1952870/93‑1 (MQ=255)

                                                                                 ggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGaa        >  1:3485030/1‑93 (MQ=255)

                                                                                 ggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGaa        >  2:8462888/1‑93 (MQ=255)

                                                                                  gcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAAc       <  2:1489987/93‑1 (MQ=255)

                                                                                    gTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTc     <  1:7102068/93‑1 (MQ=255)

                                                                                      ttCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa   <  1:866606/93‑1 (MQ=255)

                                                                                       tCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAt  <  1:1457703/93‑1 (MQ=255)

CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT  >  NC_000913/3935805‑3935984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  >  NC_000913/3935802‑3935988

GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTG                                                                                               >  SRR4302541.3676671/1‑94 (MQ=60)

GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTG                                                                                               >  SRR4302541.5754065/1‑94 (MQ=60)

GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTG                                                                                               <  SRR4302541.6634695/94‑1 (MQ=60)

   CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCT                                                                                            <  SRR4302541.4891987/94‑1 (MQ=60)

   CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCT                                                                                            <  SRR4302541.7407701/94‑1 (MQ=60)

   CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCT                                                                                            <  SRR4302541.6942849/94‑1 (MQ=60)

    CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTC                                                                                           >  SRR4302541.8635624/1‑94 (MQ=60)

    CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTC                                                                                           <  SRR4302541.5185564/94‑1 (MQ=60)

    CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTC                                                                                           >  SRR4302541.6377177/1‑94 (MQ=60)

     GTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCA                                                                                          >  SRR4302541.957687/1‑94 (MQ=60)

      TGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAA                                                                                         >  SRR4302541.4066573/1‑94 (MQ=60)

       GGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAAC                                                                                        >  SRR4302541.3375074/1‑94 (MQ=60)

         CGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGCTTCTGCCTCCACAG                                                                                      >  SRR4302541.2074927/1‑94 (MQ=60)

         CGTGAAGAGATCGACGCATGTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAG                                                                                      <  SRR4302541.6594535/94‑1 (MQ=60)

          GTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGT                                                                                     >  SRR4302541.7066855/1‑94 (MQ=60)

           TGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTT                                                                                    >  SRR4302541.4376240/1‑94 (MQ=60)

           TGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTT                                                                                    >  SRR4302541.4063098/1‑94 (MQ=60)

           TGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTT                                                                                    >  SRR4302541.5323691/1‑94 (MQ=60)

            GAAGAGATCGACGCATTTTTAGACAGGCAGAGTTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTT                                                                                   >  SRR4302541.3620104/1‑94 (MQ=60)

            GAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTT                                                                                   <  SRR4302541.4528925/94‑1 (MQ=60)

             AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTC                                                                                  <  SRR4302541.5200206/94‑1 (MQ=60)

             AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTC                                                                                  <  SRR4302541.3943807/94‑1 (MQ=60)

             AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCATCAACAGTTTT                                                                                  >  SRR4302541.7801442/1‑94 (MQ=60)

               GAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTC                                                                                <  SRR4302541.2539269/94‑1 (MQ=60)

                AGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCA                                                                               >  SRR4302541.7985578/1‑94 (MQ=60)

                AGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCA                                                                               >  SRR4302541.7527040/1‑94 (MQ=60)

                AGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCA                                                                               >  SRR4302541.4516545/1‑94 (MQ=60)

                 GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC                                                                              >  SRR4302541.4356783/1‑94 (MQ=60)

                 GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC                                                                              <  SRR4302541.3787312/94‑1 (MQ=60)

                 GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC                                                                              >  SRR4302541.8641952/1‑94 (MQ=60)

                 GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC                                                                              <  SRR4302541.6543082/94‑1 (MQ=60)

                 GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCACGCATGGCGGGCGTTTCTGCCTCAACAGTTTCTCAG                                                                              >  SRR4302541.4356782/1‑94 (MQ=60)

                  ATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACG                                                                             <  SRR4302541.4966143/94‑1 (MQ=60)

                  ATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACG                                                                             <  SRR4302541.5750757/94‑1 (MQ=60)

                  ATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACG                                                                             <  SRR4302541.4352336/94‑1 (MQ=60)

                   TCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGT                                                                            <  SRR4302541.509173/94‑1 (MQ=60)

                   TCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGT                                                                            >  SRR4302541.4147564/1‑94 (MQ=60)

                    CGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTT                                                                           >  SRR4302541.6176329/1‑94 (MQ=60)

                    CGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTT                                                                           >  SRR4302541.7055208/1‑94 (MQ=60)

                    CGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGCTTCTGCCTCAACAGTTTCTCACGTT                                                                           >  SRR4302541.6176330/1‑94 (MQ=60)

                     GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTT                                                                          >  SRR4302541.6428889/1‑94 (MQ=60)

                     GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA                                                                          <  SRR4302541.4842241/94‑1 (MQ=60)

                       CGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATC                                                                        <  SRR4302541.1703418/94‑1 (MQ=60)

                        GCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCA                                                                       >  SRR4302541.992683/1‑94 (MQ=60)

                          ATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAAT                                                                     <  SRR4302541.7123376/94‑1 (MQ=60)

                          ATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAAT                                                                     <  SRR4302541.8130589/94‑1 (MQ=60)

                             TTTAGACAGGGAGGGGTTAGTCTTGACTACAATGAAAGATGTGGCCGGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAA                                                                  <  SRR4302541.1812546/94‑1 (MQ=60)

                              TTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAG                                                                 >  SRR4302541.1617647/1‑94 (MQ=60)

                              TTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAG                                                                 <  SRR4302541.6383986/94‑1 (MQ=60)

                              TTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAG                                                                 <  SRR4302541.8368875/94‑1 (MQ=60)

                               TAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGA                                                                <  SRR4302541.4839851/94‑1 (MQ=60)

                                 GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATC                                                              >  SRR4302541.3506781/1‑94 (MQ=60)

                                 GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATC                                                              >  SRR4302541.2629113/1‑94 (MQ=60)

                                 GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATC                                                              <  SRR4302541.4041008/94‑1 (MQ=60)

                                 GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATC                                                              <  SRR4302541.6964600/94‑1 (MQ=60)

                                  ACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCG                                                             >  SRR4302541.4891854/1‑94 (MQ=60)

                                  ACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCG                                                             <  SRR4302541.2698508/94‑1 (MQ=60)

                                   CAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGC                                                            >  SRR4302541.7765788/1‑94 (MQ=60)

                                    AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT                                                           <  SRR4302541.4879503/94‑1 (MQ=60)

                                    AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT                                                           <  SRR4302541.4062485/94‑1 (MQ=60)

                                    AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT                                                           >  SRR4302541.7235227/1‑94 (MQ=60)

                                     GGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTT                                                          <  SRR4302541.7370094/94‑1 (MQ=60)

                                     GGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTT                                                          >  SRR4302541.8177255/1‑94 (MQ=60)

                                      GCAGAGGTGANGCTTGGCTACAANGAAATATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC                                                         <  SRR4302541.7863859/94‑1 (MQ=60)

                                      GCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC                                                         <  SRR4302541.8917983/94‑1 (MQ=60)

                                      GCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC                                                         <  SRR4302541.7117099/94‑1 (MQ=60)

                                      GCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC                                                         <  SRR4302541.3710185/94‑1 (MQ=60)

                                       CAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCG                                                        >  SRR4302541.2437983/1‑94 (MQ=60)

                                       CAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCG                                                        >  SRR4302541.2437984/1‑94 (MQ=60)

                                       CAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCG                                                        <  SRR4302541.2498906/94‑1 (MQ=60)

                                        AGAGGTGACGCTTGTCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       <  SRR4302541.1233722/94‑1 (MQ=60)

                                        AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       >  SRR4302541.638666/1‑94 (MQ=60)

                                        AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       >  SRR4302541.3035069/1‑94 (MQ=60)

                                        AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       >  SRR4302541.5933434/1‑94 (MQ=60)

                                        AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       >  SRR4302541.5432619/1‑94 (MQ=60)

                                        AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT                                                       >  SRR4302541.3040186/1‑94 (MQ=60)

                                         GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC                                                      <  SRR4302541.3837197/94‑1 (MQ=60)

                                         GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC                                                      >  SRR4302541.1444697/1‑94 (MQ=60)

                                         GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC                                                      >  SRR4302541.8715804/1‑94 (MQ=60)

                                          AGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCA                                                     >  SRR4302541.6092025/1‑94 (MQ=60)

                                          AGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCA                                                     <  SRR4302541.1285359/94‑1 (MQ=60)

                                          AGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCA                                                     >  SRR4302541.1284658/1‑94 (MQ=60)

                                           GGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCGTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAG                                                    <  SRR4302541.5164741/94‑1 (MQ=60)

                                           GGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCCACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAG                                                    >  SRR4302541.981328/1‑94 (MQ=60)

                                           GGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTATCACGTTATCAATAAAGATCGCTTCGTCAG                                                    <  SRR4302541.8421235/94‑1 (MQ=60)

                                            GTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGT                                                   <  SRR4302541.4591705/94‑1 (MQ=60)

                                             TGACGCTTAGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTG                                                  <  SRR4302541.7463155/94‑1 (MQ=60)

                                              GACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGA                                                 <  SRR4302541.2263119/94‑1 (MQ=60)

                                               ACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA                                                <  SRR4302541.531312/94‑1 (MQ=60)

                                                CGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAG                                               >  SRR4302541.710919/1‑94 (MQ=60)

                                                 GCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGC                                              <  SRR4302541.2246334/94‑1 (MQ=60)

                                                 CCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCCCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGC                                              <  SRR4302541.548644/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGTCTGTCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.2229525/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             >  SRR4302541.6452706/1‑94 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             >  SRR4302541.6262942/1‑94 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.1251314/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.6481865/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             >  SRR4302541.3997729/1‑94 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             >  SRR4302541.5642412/1‑94 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.7229660/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.146938/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.1604146/94‑1 (MQ=60)

                                                  CTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCG                                             <  SRR4302541.6877805/94‑1 (MQ=60)

                                                   TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGA                                            >  SRR4302541.3302188/1‑94 (MQ=60)

                                                   TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGA                                            <  SRR4302541.7691800/94‑1 (MQ=60)

                                                   TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGA                                            <  SRR4302541.474257/94‑1 (MQ=60)

                                                    TGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAT                                           <  SRR4302541.3932856/94‑1 (MQ=60)

                                                     GGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATT                                          >  SRR4302541.1183219/1‑94 (MQ=60)

                                                     GGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATT                                          <  SRR4302541.7149983/94‑1 (MQ=60)

                                                     GGCTACAATGAAAGATGTTGCCCGACTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATT                                          <  SRR4302541.1021163/94‑1 (MQ=60)

                                                       CTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAC                                        <  SRR4302541.7163082/94‑1 (MQ=60)

                                                        TACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACC                                       >  SRR4302541.5834484/1‑94 (MQ=60)

                                                        TACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACC                                       <  SRR4302541.8277525/94‑1 (MQ=60)

                                                        TACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACC                                       <  SRR4302541.8306297/94‑1 (MQ=60)

                                                         ACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCG                                      <  SRR4302541.2411411/94‑1 (MQ=60)

                                                            ATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACTTTATCAATAAAGAACGCTTCGTCAGTGAACCGATTACCACCA                                   >  SRR4302541.1129256/1‑94 (MQ=60)

                                                              TAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAA                                 <  SRR4302541.2346831/94‑1 (MQ=60)

                                                              GAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAA                                 >  SRR4302541.6219620/1‑94 (MQ=60)

                                                               GAAGATGTTGGCCGCCTGGCGGGTGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG                                <  SRR4302541.8704169/94‑1 (MQ=60)

                                                               AAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG                                <  SRR4302541.8866657/94‑1 (MQ=60)

                                                               AAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG                                >  SRR4302541.6818380/1‑94 (MQ=60)

                                                                  GATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTG                             <  SRR4302541.3207300/94‑1 (MQ=60)

                                                                   ATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGA                            >  SRR4302541.649940/1‑94 (MQ=60)

                                                                   ATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGA                            <  SRR4302541.556375/94‑1 (MQ=60)

                                                                    TGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAA                           <  SRR4302541.4252321/94‑1 (MQ=60)

                                                                    TGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAA                           >  SRR4302541.1403230/1‑94 (MQ=60)

                                                                    TGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAA                           >  SRR4302541.7860625/1‑94 (MQ=60)

                                                                       TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG                        <  SRR4302541.4704700/94‑1 (MQ=60)

                                                                       TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG                        <  SRR4302541.108860/94‑1 (MQ=60)

                                                                       TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG                        <  SRR4302541.5039173/94‑1 (MQ=60)

                                                                       TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG                        <  SRR4302541.3756583/94‑1 (MQ=60)

                                                                        TCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGG                       <  SRR4302541.7108592/94‑1 (MQ=60)

                                                                        GCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGG                       >  SRR4302541.6837954/1‑94 (MQ=60)

                                                                         CCCGCCTGGCGGTCGTTTCTGCCTCAACAATTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAACTTGAAGCGGC                      <  SRR4302541.5591470/94‑1 (MQ=60)

                                                                         CCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGC                      <  SRR4302541.454084/94‑1 (MQ=60)

                                                                         CCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGC                      >  SRR4302541.7050776/1‑94 (MQ=60)

                                                                          CCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCG                     >  SRR4302541.8267622/1‑94 (MQ=60)

                                                                          CCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCG                     <  SRR4302541.1074198/94‑1 (MQ=60)

                                                                            GCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAT                   >  SRR4302541.991305/1‑94 (MQ=60)

                                                                             CCTGGCGGGCGTTTCTGCTTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATT                  <  SRR4302541.4806076/94‑1 (MQ=60)

                                                                             CCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGCTT                  >  SRR4302541.8573148/1‑94 (MQ=60)

                                                                             CCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATT                  <  SRR4302541.565395/94‑1 (MQ=60)

                                                                             CCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATT                  >  SRR4302541.73512/1‑94 (MQ=60)

                                                                              CTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTA                 >  SRR4302541.2789553/1‑94 (MQ=60)

                                                                                GGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAA               >  SRR4302541.64483/1‑94 (MQ=60)

                                                                                 GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAG              >  SRR4302541.8851260/1‑94 (MQ=60)

                                                                                 GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAG              <  SRR4302541.2310049/94‑1 (MQ=60)

                                                                                 GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAG              >  SRR4302541.2553876/1‑94 (MQ=60)

                                                                                  CGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGA             >  SRR4302541.5898263/1‑94 (MQ=60)

                                                                                   GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCCAAGTTGAAGCGGCGATTAAAGAA            >  SRR4302541.3519915/1‑94 (MQ=60)

                                                                                   GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA            >  SRR4302541.1579749/1‑94 (MQ=60)

                                                                                   GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA            >  SRR4302541.3519916/1‑94 (MQ=60)

                                                                                     GCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACT          <  SRR4302541.125973/94‑1 (MQ=60)

                                                                                       GTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCA        <  SRR4302541.6886898/94‑1 (MQ=60)

                                                                                       GTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCA        >  SRR4302541.2608207/1‑94 (MQ=60)

                                                                                       GTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCA        <  SRR4302541.7177655/94‑1 (MQ=60)

                                                                                        TTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAA       >  SRR4302541.6733762/1‑94 (MQ=60)

                                                                                        TTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAA       >  SRR4302541.1182037/1‑94 (MQ=60)

                                                                                         TTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT      <  SRR4302541.874485/94‑1 (MQ=60)

                                                                                          TCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATT     <  SRR4302541.1471936/94‑1 (MQ=60)

                                                                                           CTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTA    <  SRR4302541.5238043/94‑1 (MQ=60)

                                                                                            TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC   <  SRR4302541.221876/94‑1 (MQ=60)

                                                                                            TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC   >  SRR4302541.295612/1‑94 (MQ=60)

                                                                                            TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC   <  SRR4302541.21360/94‑1 (MQ=60)

                                                                                            TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC   >  SRR4302541.1784465/1‑94 (MQ=60)

                                                                                            TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC   <  SRR4302541.6235489/94‑1 (MQ=60)

                                                                                             GCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  <  SRR4302541.4933139/94‑1 (MQ=60)

                                                                                             GCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  >  SRR4302541.365148/1‑94 (MQ=60)

                                                                                             GCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  >  SRR4302541.1827715/1‑94 (MQ=60)

                                                                                             GCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGAGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  <  SRR4302541.4481732/94‑1 (MQ=60)

GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG  >  NC_000913/3935802‑3935988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`