Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,935,895 |
A→G |
T15A (ACC→GCC) |
rbsR → |
RbsR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,935,895 | 0 | A | G | 99.2%
| 828.4
/ ‑3.3
| 238 | T15A (ACC→GCC) | rbsR | RbsR |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (129/107); total (131/107) |
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
Only 100 of 245 total aligned reads displayed.
CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT > NC_000913/3935805‑3935984
|
ccGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGcc > 1:1890189/1‑93 (MQ=255)
gTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTc > 2:4587824/1‑93 (MQ=255)
gTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTc > 2:4868169/1‑93 (MQ=255)
gTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTc < 1:4680936/93‑1 (MQ=255)
gggCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCa < 1:4393155/92‑1 (MQ=255)
ggCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCaa > 1:4586648/1‑93 (MQ=255)
gCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAAc > 2:4082132/1‑93 (MQ=255)
gCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAAc < 1:6151103/93‑1 (MQ=255)
cGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACa < 1:515927/93‑1 (MQ=255)
gTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGTCTCAACAg > 2:617562/1‑93 (MQ=255)
gTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAg < 2:6080664/93‑1 (MQ=255)
gTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGGTTCTGCCTCAAccg > 2:5418726/1‑91 (MQ=255)
tGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGt < 2:3520653/93‑1 (MQ=255)
aaGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGttt > 2:2041569/1‑93 (MQ=255)
agagATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTtc > 2:3925276/1‑93 (MQ=255)
gagaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTtct > 1:983261/1‑93 (MQ=255)
agaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTtctc < 1:2575502/93‑1 (MQ=255)
gaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCa < 2:452497/93‑1 (MQ=255)
gaTCGACGCATTTTGAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCa < 2:3181500/93‑1 (MQ=255)
aTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAc > 1:3510046/1‑93 (MQ=255)
tCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACg > 1:5613303/1‑93 (MQ=255)
cGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGt < 2:710244/93‑1 (MQ=255)
cGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGt < 1:5098102/93‑1 (MQ=255)
gACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGtt < 2:2309483/93‑1 (MQ=255)
aCGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTa < 2:2761277/93‑1 (MQ=255)
aCGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTa > 2:6253240/1‑93 (MQ=255)
gCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATc > 1:3092611/1‑93 (MQ=255)
cATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCa > 1:3120043/1‑93 (MQ=255)
aTTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCaa > 2:1294627/1‑93 (MQ=255)
tttttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAAt > 2:2453339/1‑93 (MQ=255)
ttttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATa < 1:2915409/93‑1 (MQ=255)
ttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCCCGTTATCAATaaa < 1:6356850/93‑1 (MQ=255)
ttAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATaaa < 2:2752519/93‑1 (MQ=255)
aGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGa > 2:2926436/1‑93 (MQ=255)
aGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGa < 1:5740004/93‑1 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt < 1:3345009/93‑1 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt > 2:4965492/1‑93 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt > 2:5712542/1‑93 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt > 1:2412669/1‑93 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt < 1:5628053/93‑1 (MQ=255)
gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAt < 2:3143500/93‑1 (MQ=255)
aGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGc < 1:1634002/93‑1 (MQ=255)
ggCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCt < 2:5533423/93‑1 (MQ=255)
ggCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCt < 2:4563716/93‑1 (MQ=255)
gCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCtt > 2:3852784/1‑93 (MQ=255)
gagGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGt > 1:4071246/1‑93 (MQ=255)
agGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc < 1:1705185/93‑1 (MQ=255)
agGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc > 1:1905574/1‑93 (MQ=255)
agGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc < 2:4268797/93‑1 (MQ=255)
agGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc < 2:3726827/93‑1 (MQ=255)
agGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc < 1:711597/93‑1 (MQ=255)
ggTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCa < 1:2291199/93‑1 (MQ=255)
tGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGt < 2:395664/93‑1 (MQ=255)
gACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTg < 2:5007498/93‑1 (MQ=255)
aCGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGa > 1:2890428/1‑93 (MQ=255)
cGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGaa > 1:3851115/1‑93 (MQ=255)
cGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGaa > 1:3601365/1‑93 (MQ=255)
cGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGaa < 2:2483880/93‑1 (MQ=255)
gCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAg > 1:4286879/1‑93 (MQ=255)
gCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAg < 1:1434714/93‑1 (MQ=255)
ttGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCg > 2:5615454/1‑93 (MQ=255)
ggCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAt < 2:5170253/93‑1 (MQ=255)
cTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTa < 1:4418618/93‑1 (MQ=255)
tACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAc > 1:3047211/1‑93 (MQ=255)
aCAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAcc < 1:5802389/93‑1 (MQ=255)
aCAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAcc > 1:1101221/1‑93 (MQ=255)
aaTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGc > 2:1078768/1‑93 (MQ=255)
aTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGcc > 1:1280793/1‑93 (MQ=255)
aTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGcc > 1:5245678/1‑93 (MQ=255)
aTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGcc > 1:2242585/1‑93 (MQ=255)
aTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGcc < 1:2072064/93‑1 (MQ=255)
gAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCaa < 2:1959150/93‑1 (MQ=255)
aaaGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCaaa < 1:4968054/93‑1 (MQ=255)
aaGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAg > 2:1368627/1‑93 (MQ=255)
aaGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAg > 1:941548/1‑93 (MQ=255)
aaGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAg < 1:696991/93‑1 (MQ=255)
gATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGtt > 2:1870539/1‑93 (MQ=255)
gATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGtt > 1:4000706/1‑93 (MQ=255)
tGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGa < 1:1321422/93‑1 (MQ=255)
gTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGaa < 2:1240106/93‑1 (MQ=255)
tGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgc > 2:533634/1‑93 (MQ=255)
ccGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcggc < 1:6029894/93‑1 (MQ=255)
cGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcggcg > 2:1609246/1‑93 (MQ=255)
gCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGa > 2:3641025/1‑93 (MQ=255)
gCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGa > 2:6257368/1‑93 (MQ=255)
gCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGa > 2:792764/1‑93 (MQ=255)
ccTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAt > 1:3694317/1‑93 (MQ=255)
cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt > 1:5456091/1‑93 (MQ=255)
cTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAtt < 2:5796436/93‑1 (MQ=255)
ggcgggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaa > 2:4827562/1‑93 (MQ=255)
cgggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAATGTTGAAGCGGCGATTAAAg < 1:6319058/93‑1 (MQ=255)
cgggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGGTGAAGCGGCGATTAAAg > 1:4172280/1‑93 (MQ=255)
gggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGa < 1:532916/93‑1 (MQ=255)
ggcgTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGaa > 2:2228054/1‑93 (MQ=255)
gTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACta > 1:3764211/1‑92 (MQ=255)
gTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTc > 1:742354/1‑93 (MQ=255)
gTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAGTAAAGAACTc > 1:5873766/1‑93 (MQ=255)
ttCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa > 2:1551886/1‑93 (MQ=255)
tCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAt < 1:4550988/93‑1 (MQ=255)
tCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAt > 1:1587379/1‑93 (MQ=255)
|
CCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT > NC_000913/3935805‑3935984
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG > NC_000913/3935802‑3935988
|
GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTG > SRR4302534.6074024/1‑94 (MQ=60)
GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTG > SRR4302534.1270269/1‑94 (MQ=60)
ACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCC > SRR4302534.1939486/1‑94 (MQ=60)
CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGGAGAGGAGACGCTTGGCTACAATGAAAGTTGTTGCCCGCCTGGCGGGCGTTTCTGCCTC > SRR4302534.1722305/1‑94 (MQ=60)
CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACTCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTC < SRR4302534.5288740/94‑1 (MQ=60)
CGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTC < SRR4302534.249420/94‑1 (MQ=60)
GTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCA < SRR4302534.4808032/94‑1 (MQ=60)
GTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCA < SRR4302534.5897786/94‑1 (MQ=60)
GTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCA > SRR4302534.3545889/1‑94 (MQ=60)
TGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAA > SRR4302534.4711108/1‑94 (MQ=60)
GGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAA < SRR4302534.4511636/94‑1 (MQ=60)
GCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACA < SRR4302534.6318452/94‑1 (MQ=60)
GCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACA < SRR4302534.2765088/94‑1 (MQ=60)
GCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGCCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACA > SRR4302534.5105589/1‑94 (MQ=60)
CGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAG < SRR4302534.528760/94‑1 (MQ=60)
GTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGT < SRR4302534.4360645/94‑1 (MQ=60)
TGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTT < SRR4302534.3189148/94‑1 (MQ=60)
TGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTT < SRR4302534.6187559/94‑1 (MQ=60)
GAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTT < SRR4302534.4227262/94‑1 (MQ=60)
AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAGTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTC > SRR4302534.6463814/1‑94 (MQ=60)
AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTC < SRR4302534.1325070/94‑1 (MQ=60)
AAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTC > SRR4302534.2300084/1‑94 (MQ=60)
AGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCT > SRR4302534.1008366/1‑94 (MQ=60)
AGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCT < SRR4302534.6383773/94‑1 (MQ=60)
AGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCA > SRR4302534.3610424/1‑94 (MQ=60)
AGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCA < SRR4302534.2643726/94‑1 (MQ=60)
GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC > SRR4302534.3604474/1‑94 (MQ=60)
GATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCAC > SRR4302534.6029816/1‑94 (MQ=60)
ATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACG > SRR4302534.3958052/1‑94 (MQ=60)
ATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACG > SRR4302534.5765171/1‑94 (MQ=60)
TCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGT < SRR4302534.4869315/94‑1 (MQ=60)
TCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGT < SRR4302534.1283211/94‑1 (MQ=60)
CGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTT < SRR4302534.5235700/94‑1 (MQ=60)
CGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTT < SRR4302534.5235699/94‑1 (MQ=60)
gatcgattttgagaatGGCAGAGGTGGTGCTGGGCTACAATGAAAGATGTTGCTCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA < SRR4302534.4662493/78‑1 (MQ=60)
GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA > SRR4302534.4705920/1‑94 (MQ=60)
GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA < SRR4302534.5366177/94‑1 (MQ=60)
GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA < SRR4302534.4513050/94‑1 (MQ=60)
GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTA > SRR4302534.1662151/1‑94 (MQ=60)
ACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTAT < SRR4302534.6213084/94‑1 (MQ=60)
CGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATC > SRR4302534.1814640/1‑94 (MQ=60)
CGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATC < SRR4302534.5464669/94‑1 (MQ=60)
CGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATC > SRR4302534.2364354/1‑94 (MQ=60)
CGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATC > SRR4302534.3173952/1‑94 (MQ=60)
GCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCTCCTGGCGGGCGTTTCTTCCTCCACAGCTTCTCACGTTATAA > SRR4302534.381001/1‑94 (MQ=60)
GCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCA > SRR4302534.5515995/1‑94 (MQ=60)
GCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCA < SRR4302534.4444306/94‑1 (MQ=60)
GCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCA > SRR4302534.3202084/1‑94 (MQ=60)
TTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATA < SRR4302534.3813294/94‑1 (MQ=60)
TTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATA > SRR4302534.369811/1‑94 (MQ=60)
TTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAA < SRR4302534.2991928/94‑1 (MQ=60)
TTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCCCGTTATCAATAAAG < SRR4302534.6528525/94‑1 (MQ=60)
TTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAG > SRR4302534.721448/1‑94 (MQ=60)
AGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAT < SRR4302534.5895582/94‑1 (MQ=60)
AGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGAT > SRR4302534.2476831/1‑94 (MQ=60)
GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATC < SRR4302534.3434542/94‑1 (MQ=60)
GACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATC < SRR4302534.5780363/94‑1 (MQ=60)
AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAATAGTTTCTCACGTTATCAATAAAGATCGCT > SRR4302534.6525231/1‑94 (MQ=60)
AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT > SRR4302534.1488562/1‑94 (MQ=60)
AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT < SRR4302534.1676597/94‑1 (MQ=60)
AGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCT > SRR4302534.1017169/1‑94 (MQ=60)
GCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC > SRR4302534.4131452/1‑94 (MQ=60)
CAGAGGTGACGCTGGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTCCTCACGTTATCAATAAAGATCGCTTCG < SRR4302534.560392/94‑1 (MQ=60)
AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCTCTTCGT > SRR4302534.2320920/1‑94 (MQ=60)
AGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGT > SRR4302534.4180494/1‑94 (MQ=60)
GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC > SRR4302534.1955286/1‑94 (MQ=60)
GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC > SRR4302534.3200755/1‑94 (MQ=60)
GAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTC > SRR4302534.400691/1‑94 (MQ=60)
AGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCA < SRR4302534.729092/94‑1 (MQ=60)
AGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCA < SRR4302534.1749490/94‑1 (MQ=60)
GGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAG > SRR4302534.663838/1‑94 (MQ=60)
GGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAG < SRR4302534.2352014/94‑1 (MQ=60)
TGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTG < SRR4302534.6618374/94‑1 (MQ=60)
GACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGA > SRR4302534.3268697/1‑94 (MQ=60)
GACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGA > SRR4302534.2966270/1‑94 (MQ=60)
ACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA > SRR4302534.3954529/1‑94 (MQ=60)
ACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA > SRR4302534.3698213/1‑94 (MQ=60)
CGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAG > SRR4302534.4403013/1‑94 (MQ=60)
GCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGC < SRR4302534.1472463/94‑1 (MQ=60)
TGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAT > SRR4302534.1008954/1‑94 (MQ=60)
TGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGAT > SRR4302534.194370/1‑94 (MQ=60)
GCTACAATAAAAGATGTTGCCCGCCTGGGGGGCGTTTCTGCCGCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTA < SRR4302534.4544370/94‑1 (MQ=60)
CTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAC > SRR4302534.3127148/1‑94 (MQ=60)
CTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTAC < SRR4302534.4537908/94‑1 (MQ=60)
TACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACC > SRR4302534.1129912/1‑94 (MQ=60)
ACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCG < SRR4302534.5959852/94‑1 (MQ=60)
CAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGC < SRR4302534.5853280/94‑1 (MQ=60)
AATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCC > SRR4302534.5387368/1‑94 (MQ=60)
AATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCC > SRR4302534.2302010/1‑94 (MQ=60)
AATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCC > SRR4302534.1314504/1‑94 (MQ=60)
ATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCA > SRR4302534.2069097/1‑94 (MQ=60)
ATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCA < SRR4302534.2126275/94‑1 (MQ=60)
TGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAA > SRR4302534.6181677/1‑94 (MQ=60)
AAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG > SRR4302534.4760632/1‑94 (MQ=60)
AAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG < SRR4302534.5102564/94‑1 (MQ=60)
AAAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAG > SRR4302534.965494/1‑94 (MQ=60)
AAGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGT < SRR4302534.714061/94‑1 (MQ=60)
AGATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTT > SRR4302534.4107805/1‑94 (MQ=60)
GATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTG < SRR4302534.1447174/94‑1 (MQ=60)
ATGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGA > SRR4302534.3153190/1‑94 (MQ=60)
TGTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAA < SRR4302534.1356265/94‑1 (MQ=60)
GTTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAG < SRR4302534.2451458/94‑1 (MQ=60)
CTTGCCCGCCTGTCGCGCGTTCCTTCATCAACAGTTTCTCCAGTTATCAATAAAAATCGCTTCGTCAGTGAGGCGATTACCGCCAAAGTTGAAG < SRR4302534.602067/94‑1 (MQ=50)
TTGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGC > SRR4302534.2058292/1‑94 (MQ=60)
TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG > SRR4302534.1845770/1‑94 (MQ=60)
TGCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCG < SRR4302534.901077/94‑1 (MQ=60)
GCCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGG > SRR4302534.4691330/1‑94 (MQ=60)
CCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGC < SRR4302534.5056454/94‑1 (MQ=60)
CCCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGC < SRR4302534.3061010/94‑1 (MQ=60)
CCGCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCG < SRR4302534.6193749/94‑1 (MQ=60)
GCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAT > SRR4302534.731204/1‑94 (MQ=60)
GCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAT > SRR4302534.3793649/1‑94 (MQ=60)
GCCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAT < SRR4302534.5452451/94‑1 (MQ=60)
CCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATT < SRR4302534.3897183/94‑1 (MQ=60)
CCTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATT > SRR4302534.5603116/1‑94 (MQ=60)
CTGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTA < SRR4302534.4477773/94‑1 (MQ=60)
TGGCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAA > SRR4302534.2957504/1‑94 (MQ=60)
GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAG < SRR4302534.1367773/94‑1 (MQ=60)
GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAG < SRR4302534.165877/94‑1 (MQ=60)
GCGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGGTGAAGCGGCGATTAAAG > SRR4302534.4284981/1‑94 (MQ=60)
CGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAATGTTGAAGCGGCGATTAAAGA < SRR4302534.6489828/94‑1 (MQ=60)
CGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGA < SRR4302534.5767292/94‑1 (MQ=60)
CGGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGA > SRR4302534.2970121/1‑94 (MQ=60)
GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA > SRR4302534.998429/1‑94 (MQ=60)
GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA < SRR4302534.546146/94‑1 (MQ=60)
GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA > SRR4302534.3030489/1‑94 (MQ=60)
GGGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAA > SRR4302534.589836/1‑94 (MQ=60)
GGCGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGATGAAGCGGCGAGTAAAGAAC > SRR4302534.3502610/1‑94 (MQ=60)
CGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTC > SRR4302534.760746/1‑94 (MQ=60)
CGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTC > SRR4302534.4229756/1‑94 (MQ=60)
CGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTA > SRR4302534.3865270/1‑94 (MQ=60)
CGTTTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAGTAAAGAACTC > SRR4302534.6033239/1‑94 (MQ=60)
CGTTTCTGCATCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTCCCGCCAAAGTTGAAGCGGCGATTAAAGAACTC < SRR4302534.5662280/94‑1 (MQ=60)
TTCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAT > SRR4302534.1628896/1‑94 (MQ=60)
TCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATT > SRR4302534.1488058/1‑94 (MQ=60)
TCTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATT < SRR4302534.4674351/94‑1 (MQ=60)
CTGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTA < SRR4302534.6285420/94‑1 (MQ=60)
TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC > SRR4302534.5095044/1‑94 (MQ=60)
TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC < SRR4302534.4957517/94‑1 (MQ=60)
TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC > SRR4302534.5067600/1‑94 (MQ=60)
TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC > SRR4302534.1615136/1‑94 (MQ=60)
TGCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAC > SRR4302534.6116056/1‑94 (MQ=60)
GCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG < SRR4302534.4043999/94‑1 (MQ=60)
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GTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACG > NC_000913/3935802‑3935988
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
