Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,987,822 2 bp→CG coding (578‑579/963 nt) hemC ← porphobilinogen deaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,987,8220GC100.0% 1940.4 / NA 564G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (275/289);  total (275/289)
*NC_0009133,987,8230CG99.8% 1934.0 / NA 561G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (271/289);  total (271/290)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 583 total aligned reads displayed.

CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909
                                                                                        ||                                                                                      
cagcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgc                                                                                    <  1:6914188/93‑1 (MQ=255)
cagcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgc                                                                                    <  1:2336102/93‑1 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  <  1:8238509/93‑1 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  >  1:3574590/1‑93 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  <  1:5577305/93‑1 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  >  2:4988751/1‑93 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  <  1:1515411/93‑1 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGgcgc                                                                                  <  1:1080804/93‑1 (MQ=255)
   cTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGcgcg                                                                                 <  2:6733215/93‑1 (MQ=255)
    tCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGa                                                                                >  2:7023477/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGCAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATAc                                                                            >  1:5878834/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATAc                                                                            >  2:5422934/1‑93 (MQ=255)
         aGTGCGTGAATCATCAAGGCGGCATTCAATAGCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGAGGCAACGAGGCGCGCATACg                                                                           >  2:1364173/1‑93 (MQ=255)
         aGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACg                                                                           >  1:4548213/1‑93 (MQ=255)
            gCGTGAATCATCAAGGCGGCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGa                                                                        <  1:3253253/93‑1 (MQ=255)
             cGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGAc                                                                       <  1:8072271/93‑1 (MQ=255)
               tGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTc                                                                     >  2:914625/1‑93 (MQ=255)
                gAATCATCAAGGCGGCATTCGATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTcc                                                                    >  1:3120569/1‑93 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   <  1:3951458/93‑1 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   >  2:6819509/1‑93 (MQ=255)
                     atcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGAcc                                                               >  1:7144102/1‑93 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              >  1:6045887/1‑93 (MQ=255)
                        aaGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaa                                                            >  1:4729485/1‑93 (MQ=255)
                        aaGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaa                                                            <  2:4038977/93‑1 (MQ=255)
                         aGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaaa                                                           <  2:7158849/93‑1 (MQ=255)
                          ggcggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAc                                                          <  1:6108631/93‑1 (MQ=255)
                           gcggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACg                                                         >  1:6817139/1‑93 (MQ=255)
                            cggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGt                                                        <  1:6539762/93‑1 (MQ=255)
                             ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                                       <  2:1758014/93‑1 (MQ=255)
                             ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                                       <  1:2816974/93‑1 (MQ=255)
                               cATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtttt                                                     <  1:1001666/93‑1 (MQ=255)
                                atgcAACACCCACCGCCCCCTGTCCTACGGCCGGAAGAGAAATCTC‑GAGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTa                                                    <  2:3498685/90‑1 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   >  1:2001964/1‑93 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   >  1:7439409/1‑93 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 >  1:1876543/1‑93 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  2:5812656/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  2:6071435/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  2:8091292/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  1:958548/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 >  1:8357304/1‑93 (MQ=255)
                                     aTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCg                                               <  2:4709174/93‑1 (MQ=255)
                                        cccACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                                            >  2:2321425/1‑93 (MQ=255)
                                        cccACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                                            <  2:1194963/93‑1 (MQ=255)
                                         ccACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTa                                           <  2:854032/93‑1 (MQ=255)
                                         ccACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTa                                           <  1:8717730/93‑1 (MQ=255)
                                          cACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAc                                          <  1:4209344/93‑1 (MQ=255)
                                          cACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAc                                          <  2:5140625/93‑1 (MQ=255)
                                           aCCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACg                                         >  1:5085457/1‑93 (MQ=255)
                                            ccGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACgg                                        >  2:659194/1‑93 (MQ=255)
                                            ccGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACgg                                        >  1:7260093/1‑93 (MQ=255)
                                             cGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGc                                       <  2:737696/93‑1 (MQ=255)
                                              gCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                                      >  2:7745608/1‑93 (MQ=255)
                                              gCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                                      >  1:5965393/1‑93 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     >  2:8721915/1‑93 (MQ=255)
                                                aCCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                                    >  1:6235370/1‑93 (MQ=255)
                                                 ccTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACATGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                                   >  1:2664577/1‑93 (MQ=255)
                                                  cTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGaa                                  <  1:4337537/93‑1 (MQ=255)
                                                    tGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGTAAGAatg                                >  2:6212852/1‑93 (MQ=255)
                                                    tGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatg                                <  1:7684728/93‑1 (MQ=255)
                                                    tGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatg                                <  2:6410967/93‑1 (MQ=255)
                                                    tGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatg                                >  2:8240380/1‑93 (MQ=255)
                                                     gTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatga                               >  1:5460417/1‑93 (MQ=255)
                                                     gTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatga                               <  2:4524813/93‑1 (MQ=255)
                                                      tCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgat                              <  2:1097960/93‑1 (MQ=255)
                                                      tCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgat                              <  2:314559/93‑1 (MQ=255)
                                                       ccTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgatg                             <  2:2825745/93‑1 (MQ=255)
                                                        cTACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATgg                            <  2:2471247/93‑1 (MQ=255)
                                                         tACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           <  2:3860064/93‑1 (MQ=255)
                                                         tACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:1866423/1‑93 (MQ=255)
                                                         tACCGCCGGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:4817285/1‑93 (MQ=255)
                                                            cgccgGAAGAGAAATCTC‑GGGTGGCAACGTGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATc                        <  1:1396204/93‑1 (MQ=255)
                                                            cgccgGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATc                        >  2:8367515/1‑93 (MQ=255)
                                                             gccgGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCg                       <  2:8003445/93‑1 (MQ=255)
                                                              ccgGAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGt                      >  2:6887411/1‑93 (MQ=255)
                                                                ggAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  1:3812115/93‑1 (MQ=255)
                                                                ggAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  1:6598637/93‑1 (MQ=255)
                                                                ggAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    >  1:4973927/1‑93 (MQ=255)
                                                                ggAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  2:2996422/93‑1 (MQ=255)
                                                                ggAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  2:1987074/93‑1 (MQ=255)
                                                                 gAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   <  1:2215180/93‑1 (MQ=255)
                                                                 gAAGAGAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   <  1:1181578/93‑1 (MQ=255)
                                                                   agagAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg                 >  2:5991116/1‑93 (MQ=255)
                                                                   agagAAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg                 >  1:84303/1‑93 (MQ=255)
                                                                    gagaAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  2:4326823/1‑93 (MQ=255)
                                                                    aagaAATCTCGGGGTGGCAAGCGGCCCCGATTCCGTG‑CTCCCAACCTAAACGTTTTTGGTCGGGTTCCGCCAGAATGATGGCATCGTATTctc                <  2:4222011/92‑3 (MQ=255)
                                                                      gaAATCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              >  1:259629/1‑93 (MQ=255)
                                                                       aaaTCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGt             <  1:2976357/93‑1 (MQ=255)
                                                                         aTCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAACCGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           <  2:1616134/93‑1 (MQ=255)
                                                                         aTCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           <  2:2678831/93‑1 (MQ=255)
                                                                         aTCTC‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           >  2:3382133/1‑93 (MQ=255)
                                                                           ctc‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATc         <  2:7552935/93‑1 (MQ=255)
                                                                           ctc‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATc         <  2:6330651/93‑1 (MQ=255)
                                                                            tc‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATTGCATCGTATTCGCCGTTATcc        <  2:5539346/93‑1 (MQ=255)
                                                                            tc‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATcc        >  1:538120/1‑93 (MQ=255)
                                                                             tggggTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATcc        <  1:7972730/91‑1 (MQ=255)
                                                                             c‑GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCa       <  2:2135120/93‑1 (MQ=255)
                                                                               gggTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAg      >  1:635929/1‑93 (MQ=255)
                                                                                ggTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGt     >  1:5810347/1‑93 (MQ=255)
                                                                                 gTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGtt    <  2:3652450/93‑1 (MQ=255)
                                                                                   ggCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTg  >  1:1816667/1‑93 (MQ=255)
                                                                                        ||                                                                                      
CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTC‑GGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 307 total aligned reads displayed.
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGC  >  NC_000913/3987729‑3987910
                                                                                             |                                                                                        
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                          >  SRR4302541.3845950/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                          >  SRR4302541.7177790/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                          >  SRR4302541.6460754/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                          <  SRR4302541.4043580/94‑1 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAC                                                                                          >  SRR4302541.3119257/1‑94 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                     <  SRR4302541.157625/94‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                     <  SRR4302541.3141416/94‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                     <  SRR4302541.3990932/94‑1 (MQ=60)
     ACAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGC                                                                                     <  SRR4302541.2987787/94‑1 (MQ=60)
      CAGGTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCG                                                                                    <  SRR4302541.2429037/94‑1 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCG                                                                                    <  SRR4302541.6987978/94‑1 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGC                                                                                   >  SRR4302541.4313348/1‑94 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGC                                                                                   >  SRR4302541.3610806/1‑94 (MQ=60)
        GCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCG                                                                                  <  SRR4302541.1090882/94‑1 (MQ=60)
        GCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCG                                                                                  >  SRR4302541.5131538/1‑94 (MQ=60)
        GCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCG                                                                                  <  SRR4302541.8328299/94‑1 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAAT                                                                               <  SRR4302541.5521908/94‑1 (MQ=60)
            GCGAGTGCGTGAATCATCAAGGCGGCATTCAATGCCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATA                                                                              <  SRR4302541.908894/94‑1 (MQ=60)
            GCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATA                                                                              >  SRR4302541.5692387/1‑94 (MQ=60)
            GCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATA                                                                              >  SRR4302541.2346106/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGCAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                             >  SRR4302541.5938664/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                             >  SRR4302541.7903250/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATAC                                                                             >  SRR4302541.5404852/1‑94 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACG                                                                            >  SRR4302541.1077673/1‑94 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACG                                                                            <  SRR4302541.5474161/94‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACG                                                                            >  SRR4302541.598942/1‑94 (MQ=60)
              GAGTGCGGGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACT                                                                            >  SRR4302541.4594225/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                           >  SRR4302541.8873034/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                           >  SRR4302541.7042594/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                           >  SRR4302541.1477633/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGCGGCAACGCGGCGCGAATACGT                                                                           >  SRR4302541.7423553/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                          >  SRR4302541.7887341/1‑94 (MQ=60)
                 TGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGA                                                                         >  SRR4302541.6166010/1‑94 (MQ=60)
                 TGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGA                                                                         >  SRR4302541.2729659/1‑94 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                        <  SRR4302541.3286095/94‑1 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                        <  SRR4302541.6392752/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                       <  SRR4302541.8160882/94‑1 (MQ=60)
                    GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                                      >  SRR4302541.4599695/1‑94 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                     >  SRR4302541.8290476/1‑94 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                   <  SRR4302541.300720/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                   >  SRR4302541.6652266/1‑94 (MQ=60)
                        ATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGA                                                                  <  SRR4302541.3197324/94‑1 (MQ=60)
                        ATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGA                                                                  <  SRR4302541.6155091/94‑1 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                 <  SRR4302541.1374523/94‑1 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                >  SRR4302541.7220236/1‑94 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                >  SRR4302541.5535999/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                               >  SRR4302541.6309452/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                               >  SRR4302541.5914665/1‑94 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                              >  SRR4302541.3162548/1‑94 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                             >  SRR4302541.8135962/1‑94 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                             >  SRR4302541.6114604/1‑94 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCAAGACCTAA                                                             >  SRR4302541.1273147/1‑94 (MQ=60)
                              AAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAA                                                            >  SRR4302541.5338689/1‑94 (MQ=60)
                              AAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCAAGACCTAAA                                                            >  SRR4302541.4788495/1‑94 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                           <  SRR4302541.2665402/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                           <  SRR4302541.3465090/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                           <  SRR4302541.8378023/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                           <  SRR4302541.6369782/94‑1 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                          <  SRR4302541.6171004/94‑1 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                          >  SRR4302541.6890090/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                          <  SRR4302541.6171003/94‑1 (MQ=60)
                                GGCGCCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                          <  SRR4302541.8463830/94‑1 (MQ=60)
                                 GCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGT                                                         <  SRR4302541.8407562/94‑1 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCTCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                                        <  SRR4302541.8557289/94‑1 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAGGTT                                                        >  SRR4302541.8398125/1‑94 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                                        <  SRR4302541.4699074/94‑1 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                                        <  SRR4302541.6606545/94‑1 (MQ=60)
                                   GGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTT                                                       <  SRR4302541.2845417/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                     <  SRR4302541.7496257/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                     <  SRR4302541.1010974/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                     <  SRR4302541.3796730/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGGAGAGACATCTCGCGTGGCAACGCGGCGCGAATCCGCGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.5046336/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    <  SRR4302541.604244/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.7192428/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    <  SRR4302541.178192/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.7518912/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    <  SRR4302541.7705926/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.3474300/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    <  SRR4302541.1035382/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    <  SRR4302541.5493017/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.6092610/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                    >  SRR4302541.2021353/1‑94 (MQ=60)
                                        TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                  >  SRR4302541.1522677/1‑94 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTTACTCCAGACCTAAACGTTTTAGTCC                                                 <  SRR4302541.8019571/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                 >  SRR4302541.1057349/1‑94 (MQ=60)
                                          AATACCCACCGCACCTTGACCTGCCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGTCTCCAGACCTAAACGTTTTAGTCCG                                                <  SRR4302541.8491289/94‑1 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                               <  SRR4302541.7431785/94‑1 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                               <  SRR4302541.2916614/94‑1 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                               >  SRR4302541.316476/1‑94 (MQ=60)
                                            TACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGC                                              >  SRR4302541.884817/1‑94 (MQ=60)
                                            TACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGC                                              >  SRR4302541.4331716/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                             >  SRR4302541.2566998/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                             <  SRR4302541.1883342/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                             <  SRR4302541.6960270/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                             <  SRR4302541.510031/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCA                                             >  SRR4302541.1905985/1‑94 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                            >  SRR4302541.7242934/1‑94 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                            >  SRR4302541.5887052/1‑94 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                            >  SRR4302541.4942475/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                           <  SRR4302541.8810969/94‑1 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                           <  SRR4302541.3699669/94‑1 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                           <  SRR4302541.8619371/94‑1 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                           <  SRR4302541.3206642/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                          <  SRR4302541.4251205/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                          >  SRR4302541.5137702/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGATGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                          <  SRR4302541.1296250/94‑1 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                         >  SRR4302541.7337544/1‑94 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                         >  SRR4302541.2329560/1‑94 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                         <  SRR4302541.3924158/94‑1 (MQ=60)
                                                  CCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGC                                        >  SRR4302541.1155030/1‑94 (MQ=60)
                                                  CCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGC                                        >  SRR4302541.3948495/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                       >  SRR4302541.6026202/1‑94 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                      >  SRR4302541.5609533/1‑94 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                      <  SRR4302541.1003411/94‑1 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                     <  SRR4302541.7318654/94‑1 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                     >  SRR4302541.6299081/1‑94 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                     >  SRR4302541.4653678/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                    >  SRR4302541.1964159/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACATGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                    >  SRR4302541.2691070/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                   >  SRR4302541.2775485/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                   >  SRR4302541.8545247/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                  <  SRR4302541.4247786/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                  <  SRR4302541.4380842/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                  >  SRR4302541.7332236/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                  >  SRR4302541.1106231/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                  >  SRR4302541.2286021/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAG                                  >  SRR4302541.1600441/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                 <  SRR4302541.1748258/94‑1 (MQ=60)
                                                          TGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGA                                <  SRR4302541.7766432/94‑1 (MQ=60)
                                                           TTCCTACAGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTCTTAGTCCGGCTACGGCAAGAATGAT                               <  SRR4302541.4006557/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                               <  SRR4302541.3762377/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                               <  SRR4302541.5445075/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                               <  SRR4302541.8147705/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGCTTTAGTCCGGCTACGGCAAGAATGAT                               >  SRR4302541.1924942/1‑94 (MQ=60)
                                                             CCTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                             >  SRR4302541.8494628/1‑94 (MQ=60)
                                                             CCTACCGACGGAAGAGAAATCTCGTGGAGCAACGCGGCGCCAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAAGG                             <  SRR4302541.2473346/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                            >  SRR4302541.5512434/1‑94 (MQ=60)
                                                              CTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                            <  SRR4302541.2841815/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATAGC                            >  SRR4302541.2901176/1‑94 (MQ=60)
                                                               TACCGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                           <  SRR4302541.5996282/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGTGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                        <  SRR4302541.1409871/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                        >  SRR4302541.4832493/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                        >  SRR4302541.2686408/1‑94 (MQ=60)
                                                                   GCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                       >  SRR4302541.651334/1‑94 (MQ=60)
                                                                   GCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                       <  SRR4302541.6270139/94‑1 (MQ=60)
                                                                   GCCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                       <  SRR4302541.6106421/94‑1 (MQ=60)
                                                                    CCGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                      <  SRR4302541.4523936/94‑1 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATGGTAT                     >  SRR4302541.6968053/1‑94 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                     >  SRR4302541.217393/1‑94 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                     >  SRR4302541.6944232/1‑94 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                     >  SRR4302541.5024899/1‑94 (MQ=60)
                                                                     CGGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                     <  SRR4302541.3885512/94‑1 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                    >  SRR4302541.6629424/1‑94 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                    <  SRR4302541.6666212/94‑1 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                    <  SRR4302541.2644879/94‑1 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                    >  SRR4302541.5963700/1‑94 (MQ=60)
                                                                      GGAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                    >  SRR4302541.5725150/1‑94 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                   <  SRR4302541.4803570/94‑1 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                   <  SRR4302541.1192997/94‑1 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                   >  SRR4302541.5520165/1‑94 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                   <  SRR4302541.2236660/94‑1 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                   <  SRR4302541.1192998/94‑1 (MQ=60)
                                                                       GAAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGCCCGGCTACGGCAAGAATGATGGCATCGTATTC                   <  SRR4302541.4563956/94‑1 (MQ=60)
                                                                        AAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                  <  SRR4302541.52805/94‑1 (MQ=60)
                                                                        AAGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                  <  SRR4302541.577558/94‑1 (MQ=60)
                                                                        AAGAGAAATCTCGGGGGGCAACGCGGCGCGAATACGTGAATCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGTACCGGATTCG                  >  SRR4302541.763665/1‑94 (MQ=60)
                                                                         AGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                 >  SRR4302541.293677/1‑94 (MQ=60)
                                                                         AGAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                 >  SRR4302541.6673293/1‑94 (MQ=60)
                                                                         AGAGAAATCTCGGGTGGAAACCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                 <  SRR4302541.6773282/94‑1 (MQ=60)
                                                                         AGAGAAATCGCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                 <  SRR4302541.4030681/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                <  SRR4302541.4591302/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                <  SRR4302541.1894006/94‑1 (MQ=60)
                                                                          GAGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                >  SRR4302541.826040/1‑94 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG               >  SRR4302541.261740/1‑94 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG               <  SRR4302541.3591120/94‑1 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG               >  SRR4302541.8453567/1‑94 (MQ=60)
                                                                           AGAAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG               >  SRR4302541.1512156/1‑94 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT             >  SRR4302541.8129543/1‑94 (MQ=60)
                                                                             AAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT             <  SRR4302541.3006359/94‑1 (MQ=60)
                                                                             AAATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT             >  SRR4302541.7121240/1‑94 (MQ=60)
                                                                              AATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA            <  SRR4302541.4372981/94‑1 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT           >  SRR4302541.8182539/1‑94 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC         <  SRR4302541.3138843/94‑1 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC         >  SRR4302541.543170/1‑94 (MQ=60)
                                                                                  TGGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA        <  SRR4302541.8060579/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAT       >  SRR4302541.7575105/1‑94 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG       <  SRR4302541.5874809/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG       >  SRR4302541.641907/1‑94 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG       >  SRR4302541.6615348/1‑94 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG       <  SRR4302541.6712786/94‑1 (MQ=60)
                                                                                    GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGT      >  SRR4302541.2087006/1‑94 (MQ=60)
                                                                                    GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGT      >  SRR4302541.5869378/1‑94 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT    <  SRR4302541.3321991/94‑1 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT    <  SRR4302541.2208591/94‑1 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT    <  SRR4302541.6276532/94‑1 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG   >  SRR4302541.1855047/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG   >  SRR4302541.1834323/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG   <  SRR4302541.2527657/94‑1 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCAGTTATCCAGTTTG   <  SRR4302541.7495189/94‑1 (MQ=60)
                                                                                        GGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGC  <  SRR4302541.6555865/94‑1 (MQ=60)
                                                                                             |                                                                                        
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGC  >  NC_000913/3987729‑3987910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑