Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,058,326 |
A→G |
T101A (ACC→GCC) |
yihL → |
putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,058,326 | 0 | A | G | 99.5%
| 695.1
/ NA
| 204 | T101A (ACC→GCC) | yihL | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (106/97); minor base T (0/1); total (106/98) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGC > NC_000913/4058237‑4058415
|
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg < 1:6724868/93‑1 (MQ=255)
cccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCg < 1:2437883/93‑1 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga > 2:412604/1‑93 (MQ=255)
aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga < 1:811051/93‑1 (MQ=255)
aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga > 1:5721081/1‑93 (MQ=255)
aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga < 2:2323014/93‑1 (MQ=255)
cgcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaa < 1:8005944/93‑1 (MQ=255)
cgcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaa > 2:552675/1‑93 (MQ=255)
gcgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa > 1:907479/1‑93 (MQ=255)
cccaTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaaaaa < 1:7098585/90‑1 (MQ=255)
cgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAc < 2:3706221/93‑1 (MQ=255)
gATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAcc > 1:3905485/1‑93 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg > 2:803338/1‑93 (MQ=255)
tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGATAAAAACCGt > 2:6680636/1‑93 (MQ=255)
tttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGt < 1:3087976/93‑1 (MQ=255)
ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTa < 2:1450520/93‑1 (MQ=255)
ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTa < 1:2482734/93‑1 (MQ=255)
ttAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGCGGGTTTGCCGAGAAAAACCGTa < 2:5860879/93‑1 (MQ=255)
tAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAc < 2:4844930/93‑1 (MQ=255)
aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc < 2:911509/93‑1 (MQ=255)
aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc < 2:7193734/93‑1 (MQ=255)
tACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGc > 1:1298977/1‑93 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:1075028/93‑1 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:2114134/93‑1 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat > 1:4927049/1‑93 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata < 2:8639917/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc > 2:1134543/1‑93 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc > 2:76144/1‑93 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc > 1:2135211/1‑93 (MQ=255)
ggAGCTGTCGGAGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 2:2781784/93‑1 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGTGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 1:5130128/1‑93 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 2:5319297/1‑93 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc < 2:7347836/93‑1 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc < 2:2158333/93‑1 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 2:7299648/1‑93 (MQ=255)
gAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTccc > 1:3263464/1‑93 (MQ=255)
aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg > 2:3619774/1‑93 (MQ=255)
aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg > 2:3931658/1‑93 (MQ=255)
aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCg > 2:5930788/1‑93 (MQ=255)
gCTGTCGGCGAGCTTTCAGCGGGCCGTAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga > 2:4113395/1‑93 (MQ=255)
gCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga > 1:7950803/1‑93 (MQ=255)
tGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga < 1:3374922/93‑1 (MQ=255)
gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc < 1:6250120/93‑1 (MQ=255)
gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc > 2:7900554/1‑93 (MQ=255)
gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc < 1:4055706/93‑1 (MQ=255)
gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc < 1:7595097/93‑1 (MQ=255)
cGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGc < 1:6029908/93‑1 (MQ=255)
cGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGc > 1:1568909/1‑93 (MQ=255)
gCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTc < 1:1255432/93‑1 (MQ=255)
gAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc > 2:1341011/1‑93 (MQ=255)
cggCTTTCAGCGGGCCGCAATTGAGCAAGCGCGAGAGCCTTCCTGGGGGTTTGCGGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc < 1:2272665/91‑1 (MQ=255)
aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAGCAGCGATATTCCCGAGACGCTcgag > 2:527678/1‑91 (MQ=255)
gCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCgcgc > 1:1390225/1‑93 (MQ=255)
tttCAGCGGGCGGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa > 1:8669064/1‑93 (MQ=255)
tttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa > 1:4186151/1‑93 (MQ=255)
tttCAGCGGGCCGCAATTGACCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa < 1:3411730/93‑1 (MQ=255)
ttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAc < 1:1714856/93‑1 (MQ=255)
tCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACt > 1:2335439/1‑93 (MQ=255)
aGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGa < 1:4477332/93‑1 (MQ=255)
gCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAt > 1:8463281/1‑93 (MQ=255)
gCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAt < 1:2764555/93‑1 (MQ=255)
ggCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGc > 1:1831935/1‑93 (MQ=255)
gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCGGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa < 1:7526038/93‑1 (MQ=255)
gCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCa < 2:4362844/93‑1 (MQ=255)
cGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAGGCTCGCGCCACTGGTTGCAGt > 2:8299330/1‑93 (MQ=255)
gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg < 2:1984897/93‑1 (MQ=255)
gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg > 2:2462537/1‑93 (MQ=255)
gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg > 1:1651926/1‑93 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTTAc > 1:5408079/1‑93 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc < 1:5661767/93‑1 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc < 1:151928/93‑1 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAATGCAGTGAc > 2:8727733/1‑93 (MQ=255)
ttGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGc > 1:820470/1‑93 (MQ=255)
tGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGcc < 2:4684077/93‑1 (MQ=255)
tGAGCAACGGCGAGAGCCTTCTTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGcc < 1:1105727/93‑1 (MQ=255)
gAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCa < 2:166574/93‑1 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 2:1852669/1‑93 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 2:7510141/1‑93 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 1:264649/1‑93 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 1:6391414/1‑93 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 2:8199070/1‑93 (MQ=255)
aaGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCaa > 1:691188/1‑93 (MQ=255)
aGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc < 2:8752231/93‑1 (MQ=255)
ggCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTg < 1:3820758/93‑1 (MQ=255)
cGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCTCCACTGATTGCAGTGACGCCATCAACTGaa < 1:5419756/93‑1 (MQ=255)
agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct < 2:697515/93‑1 (MQ=255)
gagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActc > 1:963725/1‑93 (MQ=255)
agCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAActct < 1:5061379/93‑1 (MQ=255)
gCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTa > 1:2542256/1‑93 (MQ=255)
ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt < 1:7346505/93‑1 (MQ=255)
ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt < 2:3062073/93‑1 (MQ=255)
ttCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCg > 1:8554565/1‑93 (MQ=255)
ccTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCa > 1:428452/1‑93 (MQ=255)
cTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAt > 2:2911048/1‑93 (MQ=255)
tGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc < 1:2103488/93‑1 (MQ=255)
tGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc > 1:5914170/1‑93 (MQ=255)
ggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAc > 2:5624564/1‑93 (MQ=255)
gggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAcc < 1:5377075/93‑1 (MQ=255)
ggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCg > 1:854541/1‑93 (MQ=255)
tttGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGc < 2:643051/93‑1 (MQ=255)
|
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGC > NC_000913/4058237‑4058415
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG > NC_000913/4058233‑4058419
|
GTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTG < SRR4302541.1086590/94‑1 (MQ=60)
CTGACTCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTG < SRR4302541.7261670/94‑1 (MQ=60)
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGC > SRR4302541.4900997/1‑94 (MQ=60)
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGA < SRR4302541.6796631/94‑1 (MQ=60)
CCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGA < SRR4302541.2462044/94‑1 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAG < SRR4302541.2141176/94‑1 (MQ=60)
CAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGA > SRR4302541.5779399/1‑94 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA < SRR4302541.8463812/94‑1 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA < SRR4302541.818473/94‑1 (MQ=60)
GCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAA > SRR4302541.6002388/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA > SRR4302541.915917/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA > SRR4302541.8109592/1‑94 (MQ=60)
CGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAA < SRR4302541.8094010/94‑1 (MQ=60)
cccATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAC < SRR4302541.7174116/91‑1 (MQ=60)
GGATTTAATTACAGTCCGGAGCGTTCTGCGAGCTTTCAGCGGGCCGCAATTGATCAAGTGCGAGAGCCTTCCTGGGGGTTTTCCGAGAAAAACC < SRR4302541.3094152/94‑1 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACG > SRR4302541.5698495/1‑94 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC > SRR4302541.3944529/1‑94 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC > SRR4302541.4512603/1‑94 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC < SRR4302541.150803/94‑1 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG < SRR4302541.93275/94‑1 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG > SRR4302541.2673367/1‑94 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG < SRR4302541.1387053/94‑1 (MQ=60)
ATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGT < SRR4302541.4065507/94‑1 (MQ=60)
TTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTA < SRR4302541.3119304/94‑1 (MQ=60)
TTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAC < SRR4302541.2507668/94‑1 (MQ=60)
TTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAC < SRR4302541.1850350/94‑1 (MQ=60)
AATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCA < SRR4302541.2435901/94‑1 (MQ=60)
AATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCA < SRR4302541.2510249/94‑1 (MQ=60)
ATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAG > SRR4302541.5468451/1‑94 (MQ=60)
TTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGC < SRR4302541.1712369/94‑1 (MQ=60)
TTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGC > SRR4302541.1311785/1‑94 (MQ=60)
ACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGA < SRR4302541.6157592/94‑1 (MQ=60)
CAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGAT < SRR4302541.2635796/94‑1 (MQ=60)
CAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGAT > SRR4302541.4977317/1‑94 (MQ=60)
AGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATA < SRR4302541.5101405/94‑1 (MQ=60)
GTCCGGAGGTGGCGGCGAGCTTGCAGCGGGCCGCAAGTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAT < SRR4302541.5666681/94‑1 (MQ=60)
CCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTC < SRR4302541.2355267/94‑1 (MQ=60)
CGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCC > SRR4302541.2155863/1‑94 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGTGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC > SRR4302541.5182871/1‑94 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC > SRR4302541.3296391/1‑94 (MQ=60)
AGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGA > SRR4302541.8038403/1‑94 (MQ=60)
TGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAC < SRR4302541.3408572/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG < SRR4302541.6313970/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG < SRR4302541.4095723/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG < SRR4302541.1582361/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG < SRR4302541.7676239/94‑1 (MQ=60)
TCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGC > SRR4302541.1584616/1‑94 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT < SRR4302541.6091675/94‑1 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT < SRR4302541.4131142/94‑1 (MQ=60)
GGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTC > SRR4302541.3439606/1‑94 (MQ=60)
GGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTC > SRR4302541.2491551/1‑94 (MQ=60)
GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCG > SRR4302541.7541750/1‑94 (MQ=60)
GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCG < SRR4302541.1267893/94‑1 (MQ=60)
CGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGC < SRR4302541.2771163/94‑1 (MQ=60)
cgGCTTTCAGCGGGCCGCAATTGAGCAAGCGCGAGAGCCTTCCTGGGGGTTTGCGGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG < SRR4302541.2294640/92‑1 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG > SRR4302541.6322418/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCC > SRR4302541.3346562/1‑94 (MQ=60)
AGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGC > SRR4302541.1403855/1‑94 (MQ=60)
AGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGC > SRR4302541.4850092/1‑94 (MQ=60)
CTTTCAGCGGGCGGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCA > SRR4302541.8761845/1‑94 (MQ=60)
CTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCcccc > SRR4302541.1145438/1‑90 (MQ=60)
CTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCA > SRR4302541.4227690/1‑94 (MQ=60)
TTTCAGCGGGCCGCAATTGACCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAC < SRR4302541.3445790/94‑1 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT > SRR4302541.2358118/1‑94 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT < SRR4302541.1731636/94‑1 (MQ=60)
TCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTG > SRR4302541.2182697/1‑94 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT < SRR4302541.4522449/94‑1 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT > SRR4302541.8554570/1‑94 (MQ=60)
GCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATT < SRR4302541.2792377/94‑1 (MQ=60)
CGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTG < SRR4302541.5445073/94‑1 (MQ=60)
GGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGC > SRR4302541.1849697/1‑94 (MQ=60)
GCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCGGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAG < SRR4302541.7606460/94‑1 (MQ=60)
CGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTG > SRR4302541.1668242/1‑94 (MQ=60)
CGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTG > SRR4302541.8917842/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTTAC > SRR4302541.5463557/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAC > SRR4302541.1887999/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG < SRR4302541.153073/94‑1 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG < SRR4302541.5719586/94‑1 (MQ=60)
ATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGC > SRR4302541.827944/1‑94 (MQ=60)
ATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGC > SRR4302541.8707021/1‑94 (MQ=60)
TGAGCAACGGCGAGAGCCTTCTTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCA < SRR4302541.1116095/94‑1 (MQ=60)
AGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATC > SRR4302541.5938523/1‑94 (MQ=60)
AGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATC > SRR4302541.6456659/1‑94 (MQ=60)
AGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATC > SRR4302541.266820/1‑94 (MQ=60)
CAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAA > SRR4302541.8519885/1‑94 (MQ=60)
CAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAA > SRR4302541.697698/1‑94 (MQ=60)
CAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAA < SRR4302541.7657857/94‑1 (MQ=60)
AGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACT > SRR4302541.1304694/1‑94 (MQ=60)
GGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTG > SRR4302541.7259166/1‑94 (MQ=60)
GGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTG > SRR4302541.1667890/1‑94 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA > SRR4302541.4245994/1‑94 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA < SRR4302541.3859246/94‑1 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA < SRR4302541.3859245/94‑1 (MQ=60)
GCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAA < SRR4302541.6521288/94‑1 (MQ=60)
CGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCTCCACTGATTGCAGTGACGCCATCAACTGAAC < SRR4302541.5475349/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302541.8570722/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302541.5344837/94‑1 (MQ=60)
AGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTC > SRR4302541.972792/1‑94 (MQ=60)
AGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTC > SRR4302541.6928442/1‑94 (MQ=60)
AGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTA > SRR4302541.2567767/1‑94 (MQ=60)
AGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTA < SRR4302541.5113431/94‑1 (MQ=60)
GCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAT < SRR4302541.1825884/94‑1 (MQ=60)
GCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAT > SRR4302541.3169709/1‑94 (MQ=60)
CCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATC < SRR4302541.7424971/94‑1 (MQ=60)
CTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG > SRR4302541.4179600/1‑94 (MQ=60)
CTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG > SRR4302541.7088890/1‑94 (MQ=60)
CTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG > SRR4302541.8646491/1‑94 (MQ=60)
CTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCG < SRR4302541.8245449/94‑1 (MQ=60)
TCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCA > SRR4302541.432451/1‑94 (MQ=60)
CCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCAT > SRR4302541.5133869/1‑94 (MQ=60)
CTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATC > SRR4302541.5974376/1‑94 (MQ=60)
TGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTTAATACAGTGACGCCATCAACTGAACTCTATCGCATCA > SRR4302541.8091195/1‑94 (MQ=60)
TGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCA < SRR4302541.2123876/94‑1 (MQ=60)
GGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACAGAACTCTATCGCATCAC > SRR4302541.7931994/1‑94 (MQ=60)
GGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACC > SRR4302541.5738095/1‑94 (MQ=60)
GGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG < SRR4302541.5432265/94‑1 (MQ=60)
GGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG > SRR4302541.862310/1‑94 (MQ=60)
GGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG > SRR4302541.862311/1‑94 (MQ=60)
GGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGG > SRR4302541.7102403/1‑94 (MQ=60)
TTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCT < SRR4302541.3466169/94‑1 (MQ=60)
GCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATTGCATCACCGGCTGGG > SRR4302541.2376499/1‑94 (MQ=60)
GCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG < SRR4302541.4859264/94‑1 (MQ=60)
GCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGCCTGCG > SRR4302541.5781181/1‑94 (MQ=60)
|
GTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG > NC_000913/4058233‑4058419
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
