Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,058,326 |
A→G |
T101A (ACC→GCC) |
yihL → |
putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,058,326 | 0 | A | G | 100.0%
| 595.5
/ NA
| 173 | T101A (ACC→GCC) | yihL | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/80); total (93/80) |
Only 100 of 179 total aligned reads displayed.
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG > NC_000913/4058236‑4058413
|
aCCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGcc > 1:4516720/1‑93 (MQ=255)
aCCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGcc > 1:4064303/1‑93 (MQ=255)
aCCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGAGCGAGAGCCTTCCTGGGGGCTTGcc > 1:6081361/1‑93 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga < 2:5059717/93‑1 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga > 2:1284336/1‑93 (MQ=255)
ccAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCga < 1:3259947/93‑1 (MQ=255)
cAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgag > 2:524924/1‑93 (MQ=255)
cAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgag > 2:3486909/1‑93 (MQ=255)
cAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgag > 2:1906588/1‑93 (MQ=255)
aGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCgaga > 1:900702/1‑93 (MQ=255)
gCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaa > 2:1024270/1‑93 (MQ=255)
gCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGaa > 1:4239584/1‑93 (MQ=255)
cgATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAc < 1:1955185/93‑1 (MQ=255)
gATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAcc > 2:761492/1‑93 (MQ=255)
gATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAAcc > 2:3538480/1‑93 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg < 2:280512/93‑1 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg < 1:2500567/93‑1 (MQ=255)
aTTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCg > 1:3600552/1‑93 (MQ=255)
aaTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAcc > 1:2769061/1‑93 (MQ=255)
aTTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCa < 1:1440233/93‑1 (MQ=255)
ttACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAg < 2:6244397/93‑1 (MQ=255)
tACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGc < 2:5636154/93‑1 (MQ=255)
tACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGc < 2:4776777/93‑1 (MQ=255)
aCAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCg < 2:4069188/93‑1 (MQ=255)
cAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGa < 2:1715285/93‑1 (MQ=255)
cAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGa > 2:4148945/1‑93 (MQ=255)
cAGTCCGCAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGa > 2:1393696/1‑93 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:5835272/93‑1 (MQ=255)
aGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGat < 2:615381/93‑1 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata < 2:5675190/93‑1 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata > 2:1987937/1‑93 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGata > 1:1374923/1‑93 (MQ=255)
gTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGGTTGCCGAGCAAAACCGTAACAGCGcta > 1:4428579/1‑93 (MQ=255)
tCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGatat > 1:2022647/1‑93 (MQ=255)
tCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGatat < 2:3954431/93‑1 (MQ=255)
ccGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAtt > 2:2846946/1‑93 (MQ=255)
ccGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAtt < 2:2100034/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 2:1346743/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 1:1008221/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc < 1:4838545/93‑1 (MQ=255)
ggAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTcc > 1:4900136/1‑93 (MQ=255)
aGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCg < 1:542530/93‑1 (MQ=255)
gCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCga < 2:1621227/93‑1 (MQ=255)
ggTCGGCGAGCTTTCAGCGGGCCTCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCgaga < 1:3110474/92‑1 (MQ=255)
gTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAc > 2:3708265/1‑93 (MQ=255)
tCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACg > 1:3363143/1‑93 (MQ=255)
cGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGc > 1:5118897/1‑93 (MQ=255)
ggCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCt > 1:1852574/1‑93 (MQ=255)
ggCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCt > 1:4770481/1‑93 (MQ=255)
ggCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCt > 1:4969284/1‑93 (MQ=255)
gCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTc > 1:5670217/1‑93 (MQ=255)
gCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTc < 1:3845120/93‑1 (MQ=255)
gCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTc < 2:1233460/93‑1 (MQ=255)
gAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc < 2:4417586/93‑1 (MQ=255)
gAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgc > 2:309236/1‑93 (MQ=255)
aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgcg > 2:365277/1‑93 (MQ=255)
aGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTcgcg > 1:5780248/1‑93 (MQ=255)
gCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCgcgc > 1:5295212/1‑93 (MQ=255)
cTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGcc > 1:1145581/1‑93 (MQ=255)
tttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCa > 2:6065761/1‑93 (MQ=255)
ttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAc < 1:2908458/93‑1 (MQ=255)
ttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAc > 1:940036/1‑93 (MQ=255)
ttCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAc < 1:6116595/93‑1 (MQ=255)
tCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACt < 2:2726893/93‑1 (MQ=255)
gCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAt > 1:3259857/1‑93 (MQ=255)
cGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGAGACGCTCGCGCCGCTGAtt < 1:137771/93‑1 (MQ=255)
ggCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGc > 2:5039484/1‑93 (MQ=255)
ggCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGc > 2:4465134/1‑93 (MQ=255)
ccGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAg < 2:3385182/93‑1 (MQ=255)
gCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTg < 2:5905798/93‑1 (MQ=255)
cAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGa > 1:5915500/1‑93 (MQ=255)
cAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGa < 1:4797937/93‑1 (MQ=255)
cAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGa > 1:3272386/1‑93 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGGCACTGATTGCAGGGAc > 1:2837583/1‑93 (MQ=255)
aaTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAc < 2:5472977/93‑1 (MQ=255)
aTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACg > 1:2980203/1‑93 (MQ=255)
aTTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACAAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACg > 1:448655/1‑93 (MQ=255)
tGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGcc < 2:1500130/93‑1 (MQ=255)
gCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATc > 2:4482673/1‑93 (MQ=255)
aaGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCaa > 2:5096716/1‑93 (MQ=255)
ggggCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc < 2:6344228/92‑1 (MQ=255)
aGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAc > 2:5716660/1‑93 (MQ=255)
ggCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTg < 1:2964519/93‑1 (MQ=255)
ggCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCACTGACGCCATCAACTg > 1:854873/1‑93 (MQ=255)
gCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGa > 2:4136830/1‑93 (MQ=255)
gCGAGAGCCTTCCTGGGAGTTTGCCAAGAAAATCCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGa < 1:6476347/93‑1 (MQ=255)
gagaGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAc < 1:5665028/93‑1 (MQ=255)
gagaGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAc > 2:4459895/1‑93 (MQ=255)
agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct > 2:1073916/1‑93 (MQ=255)
agagCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAct > 2:282459/1‑93 (MQ=255)
ccTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTAt > 2:4585286/1‑93 (MQ=255)
cTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATc > 2:2481728/1‑93 (MQ=255)
tCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGc < 1:1644956/93‑1 (MQ=255)
ccTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCa > 1:101250/1‑93 (MQ=255)
tGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATc > 1:1204420/1‑93 (MQ=255)
gggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCa > 2:20292/1‑93 (MQ=255)
ggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAc < 1:717504/93‑1 (MQ=255)
ggggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAc < 1:2240868/93‑1 (MQ=255)
gggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCAcc < 2:1771642/93‑1 (MQ=255)
ggTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCg > 2:1829255/1‑93 (MQ=255)
|
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG > NC_000913/4058236‑4058413
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG > NC_000913/4058234‑4058419
|
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGC > SRR4302534.3047642/1‑94 (MQ=60)
TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGC < SRR4302534.5771549/94‑1 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC > SRR4302534.4173343/1‑94 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC < SRR4302534.70654/94‑1 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC > SRR4302534.4639062/1‑94 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCC > SRR4302534.4402103/1‑94 (MQ=60)
GACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGAGCGAGAGCCTTCCTGGGGGCTTGCC > SRR4302534.6246754/1‑94 (MQ=60)
ACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCG < SRR4302534.1025550/94‑1 (MQ=60)
CCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAG < SRR4302534.3346752/94‑1 (MQ=60)
CAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGA > SRR4302534.923537/1‑94 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA < SRR4302534.885862/94‑1 (MQ=60)
AGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAA > SRR4302534.4353891/1‑94 (MQ=60)
CCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAA > SRR4302534.75111/1‑94 (MQ=60)
CCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAA < SRR4302534.5503818/94‑1 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC < SRR4302534.4937432/94‑1 (MQ=60)
CGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACC < SRR4302534.2006359/94‑1 (MQ=60)
GATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCG > SRR4302534.3697385/1‑94 (MQ=60)
ATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGT < SRR4302534.2566961/94‑1 (MQ=60)
TTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTAC < SRR4302534.1807062/94‑1 (MQ=60)
TAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACC > SRR4302534.2841943/1‑94 (MQ=60)
TAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGCCGAGAGCCCTCCTGGGGGATGGCCGAGAAAAAGCGTACC > SRR4302534.2134823/1‑94 (MQ=60)
AATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCA < SRR4302534.3679811/94‑1 (MQ=60)
ATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAG < SRR4302534.1478144/94‑1 (MQ=60)
ATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAG > SRR4302534.4254093/1‑94 (MQ=60)
AGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATA > SRR4302534.1411147/1‑94 (MQ=60)
AGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGGTTGCCGAGCAAAACCGTAACAGCGCTA > SRR4302534.4548166/1‑94 (MQ=60)
GTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAT > SRR4302534.2075558/1‑94 (MQ=60)
GTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATAT < SRR4302534.2866455/94‑1 (MQ=60)
CGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCC > SRR4302534.5032989/1‑94 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302534.3047006/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302534.1034114/94‑1 (MQ=60)
GGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCC < SRR4302534.4969793/94‑1 (MQ=60)
GAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCG < SRR4302534.1904495/94‑1 (MQ=60)
AGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGA < SRR4302534.555942/94‑1 (MQ=60)
GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAG < SRR4302534.4920912/94‑1 (MQ=60)
GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAG < SRR4302534.3192400/94‑1 (MQ=60)
GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAG < SRR4302534.7143/94‑1 (MQ=60)
GCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTGCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGAG > SRR4302534.3356645/1‑94 (MQ=60)
TGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAC < SRR4302534.2772527/94‑1 (MQ=60)
TGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAC > SRR4302534.5114859/1‑94 (MQ=60)
GGTCGGCGAGCTTTCAGCGGGCCTCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGAC < SRR4302534.3192269/94‑1 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG > SRR4302534.3453221/1‑94 (MQ=60)
GTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGGTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACG > SRR4302534.6046083/1‑94 (MQ=60)
TCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGC > SRR4302534.5257098/1‑94 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT > SRR4302534.5103826/1‑94 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT < SRR4302534.1097780/94‑1 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT > SRR4302534.1900771/1‑94 (MQ=60)
CGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCT > SRR4302534.4900006/1‑94 (MQ=60)
GGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTC > SRR4302534.5823739/1‑94 (MQ=60)
GCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCG < SRR4302534.3948387/94‑1 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATCTTCCCGAGACGCTCGCC > SRR4302534.5756869/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCG > SRR4302534.5937038/1‑94 (MQ=60)
GAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGACTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCTAGACGCTtcag > SRR4302534.5320300/1‑90 (MQ=60)
AGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGC < SRR4302534.1214476/94‑1 (MQ=60)
AGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGC > SRR4302534.5438130/1‑94 (MQ=60)
AGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGC > SRR4302534.1310570/1‑94 (MQ=60)
GCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCC > SRR4302534.1175588/1‑94 (MQ=60)
TTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCAC > SRR4302534.963948/1‑94 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT < SRR4302534.6282984/94‑1 (MQ=60)
TTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACT < SRR4302534.2984804/94‑1 (MQ=60)
CAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGA > SRR4302534.6082305/1‑94 (MQ=60)
AGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGAT > SRR4302534.3346662/1‑94 (MQ=60)
GCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATT < SRR4302534.5367823/94‑1 (MQ=60)
CGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGAGACGCTCGCGCCGCTGATTG < SRR4302534.141373/94‑1 (MQ=60)
CCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGT < SRR4302534.1554195/94‑1 (MQ=60)
GCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGA > SRR4302534.6076130/1‑94 (MQ=60)
GCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGA < SRR4302534.3952663/94‑1 (MQ=60)
GCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGA > SRR4302534.3359581/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGGCACTGATTGCAGGGAC > SRR4302534.2912146/1‑94 (MQ=60)
CAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGAC < SRR4302534.4928209/94‑1 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302534.2992977/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302534.2148622/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302534.3058189/1‑94 (MQ=60)
AATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACAAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACG > SRR4302534.460025/1‑94 (MQ=60)
TTGAGCAAGGGCGAGTGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCC < SRR4302534.5855807/94‑1 (MQ=60)
AAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAC > SRR4302534.3420199/1‑94 (MQ=60)
AAGGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAAC > SRR4302534.458001/1‑94 (MQ=60)
GGGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCACTGACGCCATCAACTG > SRR4302534.876444/1‑94 (MQ=60)
GGCGAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGA < SRR4302534.3042159/94‑1 (MQ=60)
GCGAGAGCCTTCCTGGGAGTTTGCCAAGAAAATCCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAA < SRR4302534.6650840/94‑1 (MQ=60)
CGAGAGCCATCCTCGGGCTTGTCCGAGAAAATCCTTCCCAGCGATACTCCCGATACACTCGCGCCACTGATTGCAGTGACGCCATCAACTGAAC < SRR4302534.1302475/94‑1 (MQ=38)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAACCCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT < SRR4302534.5818399/94‑1 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302534.2369019/1‑94 (MQ=60)
GAGAGCCTTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACT > SRR4302534.4743184/1‑94 (MQ=60)
TTCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGC > SRR4302534.1475895/1‑94 (MQ=60)
TCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCA < SRR4302534.1687836/94‑1 (MQ=60)
TCCTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCA > SRR4302534.103950/1‑94 (MQ=60)
CTGGGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATC > SRR4302534.1236107/1‑94 (MQ=60)
GGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACC < SRR4302534.2300259/94‑1 (MQ=60)
GGGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACC < SRR4302534.735194/94‑1 (MQ=60)
GGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCG > SRR4302534.496657/1‑94 (MQ=60)
GGGTTTGCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGAATCACCG > SRR4302534.3147241/1‑94 (MQ=60)
TTTGCAGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCT < SRR4302534.6647841/94‑1 (MQ=60)
GCCGAGAAAACCCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG < SRR4302534.3979437/94‑1 (MQ=60)
GCCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG < SRR4302534.3493005/94‑1 (MQ=60)
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TGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGG > NC_000913/4058234‑4058419
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
