Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,085,675	Δ1 bp	intergenic (+38/+13)	yiiG → / ← frvR	hypothetical protein/putative frv operon regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,085,675	0	G	.	99.6%	1189.4 / ‑2.4	262	intergenic (+38/+13)	yiiG/frvR	hypothetical protein/putative frv operon regulatory protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base . (163/96); minor base C (0/1); total (164/98)
Fisher's exact test for biased strand distribution p-value = 3.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 283 total aligned reads displayed.

GCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA  >  NC_000913/4085587‑4085762

 cATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa                                                                                   <  1:5261198/93‑1 (MQ=255)

 cATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa                                                                                   >  2:7134602/1‑93 (MQ=255)

  aTTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGac                                                                                  <  1:7629513/93‑1 (MQ=255)

  aTTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGac                                                                                  <  2:1908265/93‑1 (MQ=255)

   ttACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGaca                                                                                 >  1:593122/1‑93 (MQ=255)

   ttACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGaca                                                                                 >  1:4634889/1‑93 (MQ=255)

     aCGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGAcaca                                                                               <  1:2761226/93‑1 (MQ=255)

       gcgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGt                                                                             <  2:4550065/93‑1 (MQ=255)

       gcgAGTACAACGAAATGGTTGATGACTATAATAGCATGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGt                                                                             >  1:418802/1‑93 (MQ=255)

        cgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGTAGTGTCGGATGCGGCGC‑ATCCGACACAGtt                                                                            >  2:5242661/1‑93 (MQ=255)

        cgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGtt                                                                            <  1:3897237/93‑1 (MQ=255)

         gAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTc                                                                           >  2:4016959/1‑93 (MQ=255)

          aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCa                                                                          <  1:7876801/93‑1 (MQ=255)

           gTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACACTTCAc                                                                         >  1:1228796/1‑93 (MQ=255)

           gTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGCGTCGGATGCGGCGC‑ATCCGACACAGTTCAc                                                                         >  1:3798405/1‑93 (MQ=255)

              cAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCAcccc                                                                      <  1:8413266/93‑1 (MQ=255)

              aaaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCAcccc                                                                      <  1:7440748/92‑1 (MQ=255)

               aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCt                                                                     <  1:1446479/93‑1 (MQ=255)

               aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCt                                                                     >  2:4915993/1‑93 (MQ=255)

                aCGAAATGGTTGATGACTATAATAGCCTGCTTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCtt                                                                    <  1:4302130/93‑1 (MQ=255)

                aCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCtt                                                                    >  1:2156123/1‑93 (MQ=255)

                  gAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTtgt                                                                  >  2:7048370/1‑93 (MQ=255)

                  gAAATGGTGTATGACTATAATAGCCTCCGTTAAACGTTTTTGATGATAAATGCAGTTTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTtgt                                                                  <  1:1739364/93‑1 (MQ=255)

                   aaaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTtgtg                                                                 >  2:1936816/1‑93 (MQ=255)

                   aaaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTtgtg                                                                 >  1:8694600/1‑93 (MQ=255)

                    aaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGa                                                                >  1:3596040/1‑93 (MQ=255)

                       ggTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGt                                                             <  1:6678402/93‑1 (MQ=255)

                        gtctatgaATATAAGAGCCTCCGTTAAACGTTTTTGATAATAAATGCAGTGTCGGATGGGGC‑CCACCCGACACAGTTCACCCCTTGTGAAGTa                                                            <  2:7934874/89‑1 (MQ=255)

                        gTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGGGC‑ATCCGACACAGTTCACCCCTTGTGAAGTa                                                            >  1:4799377/1‑93 (MQ=255)

                        gTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTa                                                            >  2:1598197/1‑93 (MQ=255)

                          tgatgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAAc                                                          <  2:6786809/93‑1 (MQ=255)

                           gatgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACt                                                         >  1:1351634/1‑93 (MQ=255)

                            atgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTc                                                        >  2:6887879/1‑93 (MQ=255)

                             tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTcc                                                       >  2:453135/1‑93 (MQ=255)

                             tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTcc                                                       >  2:6026073/1‑93 (MQ=255)

                             tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTcc                                                       <  2:2119287/93‑1 (MQ=255)

                             tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTcc                                                       >  1:2887709/1‑93 (MQ=255)

                             tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTcc                                                       >  1:1979675/1‑93 (MQ=255)

                              gaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGTCACAGTTCACCCCCTGTGAAGTAACTCCa                                                      >  1:7126882/1‑93 (MQ=255)

                               aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCAt                                                     <  2:8564453/93‑1 (MQ=255)

                               aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGCGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCAt                                                     <  2:3798406/93‑1 (MQ=255)

                                cTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATa                                                    >  1:3231724/1‑93 (MQ=255)

                                  ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATaaa                                                  >  1:1167420/1‑93 (MQ=255)

                                  ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATaaa                                                  >  2:8191331/1‑93 (MQ=255)

                                  ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATaaa                                                  >  1:6892141/1‑93 (MQ=255)

                                   taataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAAt                                                 >  2:5944868/1‑93 (MQ=255)

                                    aataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCAGCCCTTGTGAAGTAACTCCATAAATg                                                >  2:837934/1‑93 (MQ=255)

                                     ataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGc                                               >  2:1244684/1‑93 (MQ=255)

                                      taGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc                                              >  1:4651263/1‑93 (MQ=255)

                                       ggCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCt                                             >  2:848324/2‑93 (MQ=255)

                                       aGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCt                                             <  2:3470902/93‑1 (MQ=255)

                                         ccTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCa                                           >  1:6824017/1‑93 (MQ=255)

                                          cTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat                                          >  1:2349134/1‑93 (MQ=255)

                                          cTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat                                          >  1:2420420/1‑93 (MQ=255)

                                          cTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGCTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat                                          >  1:219758/1‑93 (MQ=255)

                                          cTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ACCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat                                          <  1:6485745/93‑1 (MQ=255)

                                          cTGCCTTAAAAGTTTTTGATGATAAATGCAGTGTCGGATTCGGC‑ATACCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat                                          <  2:2554537/93‑1 (MQ=255)

                                           tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCata                                         >  1:1074669/1‑93 (MQ=255)

                                           tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCata                                         <  1:8489306/93‑1 (MQ=255)

                                           tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCata                                         >  1:2716013/1‑93 (MQ=255)

                                           tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCata                                         <  2:4416463/93‑1 (MQ=255)

                                             cGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATc                                       <  2:5546771/93‑1 (MQ=255)

                                              gTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATcc                                      <  1:5738077/93‑1 (MQ=255)

                                              gTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATcc                                      <  2:3634471/93‑1 (MQ=255)

                                               ttAAACGTTTTTGATGATAAATGCAGTGTCGGGTGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCt                                     >  2:2359063/1‑93 (MQ=255)

                                               ttAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCt                                     >  1:5359065/1‑93 (MQ=255)

                                                tAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTg                                    <  1:6359721/93‑1 (MQ=255)

                                                  aaCTTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt                                  <  1:5090292/93‑1 (MQ=255)

                                                  aaCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt                                  >  2:8232942/1‑93 (MQ=255)

                                                   aCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACACCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTa                                 >  2:6426006/1‑93 (MQ=255)

                                                    cGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTaa                                <  2:2875415/93‑1 (MQ=255)

                                                     ctttttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc                               <  2:3882327/92‑1 (MQ=255)

                                                      tttttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAcc                              >  1:8143500/1‑93 (MQ=255)

                                                       ttttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAccc                             >  2:66160/1‑93 (MQ=255)

                                                         ttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCgg                           >  2:1561651/1‑93 (MQ=255)

                                                           gatgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCa                         >  2:6402592/1‑93 (MQ=255)

                                                            atgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATCTCCTGTTAACCCGGCaa                        >  1:4862506/1‑93 (MQ=255)

                                                            atgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaa                        >  1:5640591/1‑93 (MQ=255)

                                                            atgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaa                        <  2:585552/93‑1 (MQ=255)

                                                             tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat                       >  2:783456/1‑93 (MQ=255)

                                                               atAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa                     <  2:5037780/93‑1 (MQ=255)

                                                               atAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa                     >  2:3050792/1‑93 (MQ=255)

                                                               atAAATCCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa                     <  1:1779695/93‑1 (MQ=255)

                                                                tAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataat                    >  2:3699781/1‑93 (MQ=255)

                                                                 aaaTGCAGTGTCGGATGCGGC‑CCATCCGATACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtc                   <  2:6545126/93‑1 (MQ=255)

                                                                  aaTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtct                  >  1:3406919/1‑93 (MQ=255)

                                                                      cAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccgc              <  2:8702837/93‑1 (MQ=255)

                                                                       aGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccgcc             <  2:5467286/93‑1 (MQ=255)

                                                                       aGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccgcc             >  2:5637195/1‑93 (MQ=255)

                                                                         tgtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCgg           <  2:2593408/93‑1 (MQ=255)

                                                                          gtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCAATAAATGCCTCATATCCTGTAAACCCGGCAATAAGCTCCGCCGGa          <  2:4180571/93‑1 (MQ=255)

                                                                           tCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAt         <  1:7042422/93‑1 (MQ=255)

                                                                           tCGGATGCGGCGC‑ATCCGACACAGTTCACCCATTGTGAAGTAACTCCATAAATGCCTCATATCGTGTTAACCCGGCAATAATCTCCGCCGGAt         <  2:1476889/93‑1 (MQ=255)

                                                                           tCGGATGCGGC‑CCATCCGCCACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAt         <  1:1617342/93‑1 (MQ=255)

                                                                             ggATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGc       >  1:5158833/1‑93 (MQ=255)

                                                                              gATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt      <  2:4714137/93‑1 (MQ=255)

                                                                              gATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt      >  2:7366185/1‑93 (MQ=255)

                                                                              gATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt      >  1:6625841/1‑93 (MQ=255)

                                                                                tGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGa    <  2:7645872/93‑1 (MQ=255)

                                                                                  cggcgC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGaca  >  1:7302651/1‑93 (MQ=255)

GCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA  >  NC_000913/4085587‑4085762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT  >  NC_000913/4085582‑4085768

CGAGAGCATTACGCGAGTACAACGAACTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCA                                                                                               <  SRR4302541.4728619/94‑1 (MQ=60)

  AGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATC                                                                                            >  SRR4302541.3351671/1‑94 (MQ=60)

  AGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATC                                                                                            <  SRR4302541.3914459/94‑1 (MQ=60)

  AGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATC                                                                                            >  SRR4302541.4069412/1‑94 (MQ=60)

  AGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATC                                                                                            >  SRR4302541.4069413/1‑94 (MQ=60)

   GAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCC                                                                                           <  SRR4302541.6449695/94‑1 (MQ=60)

    AGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCG                                                                                          >  SRR4302541.8579618/1‑94 (MQ=60)

    AGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCG                                                                                          <  SRR4302541.6828691/94‑1 (MQ=60)

      CATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGAC                                                                                        >  SRR4302541.3020209/1‑94 (MQ=60)

      CATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGAC                                                                                        <  SRR4302541.5315411/94‑1 (MQ=60)

       ATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACA                                                                                       >  SRR4302541.3398471/1‑94 (MQ=60)

       ATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACA                                                                                       <  SRR4302541.3585141/94‑1 (MQ=60)

       ATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACA                                                                                       <  SRR4302541.7710925/94‑1 (MQ=60)

       ATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACA                                                                                       >  SRR4302541.4682055/1‑94 (MQ=60)

       ATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACA                                                                                       >  SRR4302541.598714/1‑94 (MQ=60)

         TACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACA                                                                                     <  SRR4302541.5036277/94‑1 (MQ=60)

          ACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAG                                                                                    <  SRR4302541.2788989/94‑1 (MQ=60)

           CGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGT                                                                                   >  SRR4302541.7177866/1‑94 (MQ=60)

           CGCGAGTACAACGAAATGGTTGATGACTATAATAGCATGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGT                                                                                   >  SRR4302541.422691/1‑94 (MQ=60)

             CGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTC                                                                                 <  SRR4302541.3936257/94‑1 (MQ=60)

              GAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCA                                                                                >  SRR4302541.8201960/1‑94 (MQ=60)

              GAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCA                                                                                >  SRR4302541.7171340/1‑94 (MQ=60)

               AGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCAC                                                                               <  SRR4302541.7963361/94‑1 (MQ=60)

               AGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCAC                                                                               >  SRR4302541.4171211/1‑94 (MQ=60)

               AGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACACTTCAC                                                                               >  SRR4302541.1240876/1‑94 (MQ=60)

               AGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGCGTCGGATGCGGCGC‑ATCCGACACAGTTGAC                                                                               >  SRR4302541.3836633/1‑94 (MQ=60)

               AGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGCGTCGGATGCGGCGC‑ATCCGACACAGTTCAC                                                                               >  SRR4302541.3836632/1‑94 (MQ=60)

                 TACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCC                                                                             >  SRR4302541.4436605/1‑94 (MQ=60)

                  ACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCC                                                                            <  SRR4302541.1282826/94‑1 (MQ=60)

                   CAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCT                                                                           <  SRR4302541.8504243/94‑1 (MQ=60)

                   AAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCT                                                                           <  SRR4302541.7520264/94‑1 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          >  SRR4302541.2176979/1‑94 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          >  SRR4302541.2176980/1‑94 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          <  SRR4302541.140438/94‑1 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          <  SRR4302541.1460556/94‑1 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          <  SRR4302541.6179087/94‑1 (MQ=60)

                    AACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTT                                                                          >  SRR4302541.6935802/1‑94 (MQ=60)

                     ACGAAATGGTTGATGACTATAATAGCCTGCTTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTG                                                                         <  SRR4302541.4345094/94‑1 (MQ=60)

                      CGAAATGTTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGT                                                                        <  SRR4302541.4795856/94‑1 (MQ=60)

                      CGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGTGGCGC‑ATCCGACACAGTTCACCCCTTGT                                                                        >  SRR4302541.2616969/1‑94 (MQ=60)

                       GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTG                                                                       >  SRR4302541.8787665/1‑94 (MQ=60)

                       GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTG                                                                       <  SRR4302541.740157/94‑1 (MQ=60)

                       GAAATGGTGTATGACTATAATAGCCTCCGTTAAACGTTTTTGATGATAAATGCAGTTTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTG                                                                       <  SRR4302541.1756351/94‑1 (MQ=60)

                        AAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGA                                                                      >  SRR4302541.4294183/1‑94 (MQ=60)

                        AAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGA                                                                      >  SRR4302541.3632510/1‑94 (MQ=60)

                            GGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGGGC‑ATCCGACACAGTTCACCCCTTGTGAAGTA                                                                  >  SRR4302541.4848329/1‑94 (MQ=60)

                            GGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTA                                                                  <  SRR4302541.6747353/94‑1 (MQ=60)

                             GTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAA                                                                 >  SRR4302541.1774985/1‑94 (MQ=60)

                             GTTGATGACTATAATAGCCTGCGTTAAACGGTTTTGATGATACATGCAGTGTCGGCTGTCGCGC‑ATCCGCCCCAGTTCCCCCCTTGTGACGTAA                                                                 >  SRR4302541.1176770/1‑94 (MQ=44)

                               TGATGATTATAATATCCTCCTTTAAACGTTTTTGATGAAAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACT                                                               <  SRR4302541.8118845/94‑1 (MQ=60)

                               TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑CTCCGACACAGTTCACCCCTTGTGAAGTAACT                                                               >  SRR4302541.5733130/1‑94 (MQ=60)

                               TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACT                                                               >  SRR4302541.1364993/1‑94 (MQ=60)

                               TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACC                                                               >  SRR4302541.2434237/1‑94 (MQ=60)

                                GATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTC                                                              <  SRR4302541.5389504/94‑1 (MQ=60)

                                 ATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCC                                                             >  SRR4302541.2916711/1‑94 (MQ=60)

                                 ATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCC                                                             <  SRR4302541.8727324/94‑1 (MQ=60)

                                 ATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCC                                                             >  SRR4302541.1998800/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGTCACAGTTCACCCCCTGTGAAGTAACTCCA                                                            >  SRR4302541.7202802/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCA                                                            >  SRR4302541.547064/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCA                                                            >  SRR4302541.1596627/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCA                                                            <  SRR4302541.4979333/94‑1 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCA                                                            >  SRR4302541.5295634/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCA                                                            >  SRR4302541.5871123/1‑94 (MQ=60)

                                  TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTAAAGTAACTCCA                                                            >  SRR4302541.5871122/1‑94 (MQ=60)

                                   GACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCAT                                                           >  SRR4302541.5849691/1‑94 (MQ=60)

                                    ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATA                                                          >  SRR4302541.3264357/1‑94 (MQ=60)

                                    ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATA                                                          >  SRR4302541.2861904/1‑94 (MQ=60)

                                      TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAA                                                        >  SRR4302541.1178646/1‑94 (MQ=60)

                                      TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAA                                                        >  SRR4302541.6965697/1‑94 (MQ=60)

                                       ATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTACATAAAT                                                       >  SRR4302541.7514953/1‑94 (MQ=60)

                                         AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGC                                                     >  SRR4302541.5191601/1‑94 (MQ=60)

                                         AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGC                                                     >  SRR4302541.1548205/1‑94 (MQ=60)

                                         AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGC                                                     <  SRR4302541.4422925/94‑1 (MQ=60)

                                          ATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACTCCTTGAGAAGTAACTCCATAAATGCC                                                    >  SRR4302541.4698617/1‑94 (MQ=60)

                                          ATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCC                                                    >  SRR4302541.4698616/1‑94 (MQ=60)

                                            AGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTC                                                  >  SRR4302541.3680403/1‑94 (MQ=60)

                                            AGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTC                                                  <  SRR4302541.2699228/94‑1 (MQ=60)

                                             GCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCA                                                 >  SRR4302541.6897048/1‑94 (MQ=60)

                                              CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCAT                                                >  SRR4302541.2444293/1‑94 (MQ=60)

                                              CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCAT                                                <  SRR4302541.5291531/94‑1 (MQ=60)

                                              CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCAT                                                >  SRR4302541.6035476/1‑94 (MQ=60)

                                              CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCAT                                                >  SRR4302541.2371979/1‑94 (MQ=60)

                                              CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGCTCACCCCTTGTGAAGTAACTCCATAAATGCCTCAT                                                >  SRR4302541.221453/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATACATGCAGTGTCCGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATCAATGCCTCATA                                               >  SRR4302541.2743095/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               >  SRR4302541.2743094/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               >  SRR4302541.1084680/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               >  SRR4302541.5777544/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               >  SRR4302541.1233220/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               >  SRR4302541.66961/1‑94 (MQ=60)

                                               CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ACCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATA                                               <  SRR4302541.6551855/94‑1 (MQ=60)

                                                TGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATAT                                              <  SRR4302541.6791926/94‑1 (MQ=60)

                                                TGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATAT                                              <  SRR4302541.8580788/94‑1 (MQ=60)

                                                TGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATAT                                              >  SRR4302541.8588276/1‑94 (MQ=60)

                                                  CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCC                                            >  SRR4302541.891028/1‑94 (MQ=60)

                                                   GTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCT                                           <  SRR4302541.1830458/94‑1 (MQ=60)

                                                   GTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCT                                           <  SRR4302541.5796552/94‑1 (MQ=60)

                                                   GTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCT                                           >  SRR4302541.5414109/1‑94 (MQ=60)

                                                    TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                          >  SRR4302541.7283234/1‑94 (MQ=60)

                                                     TAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGT                                         <  SRR4302541.2239333/94‑1 (MQ=60)

                                                     TAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGT                                         <  SRR4302541.6424750/94‑1 (MQ=60)

                                                       AACTTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTA                                       <  SRR4302541.5142578/94‑1 (MQ=60)

                                                       AACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTA                                       >  SRR4302541.7042768/1‑94 (MQ=60)

                                                       AACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTA                                       <  SRR4302541.2008124/94‑1 (MQ=60)

                                                        ACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAA                                      <  SRR4302541.6934990/94‑1 (MQ=60)

                                                         CGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAACTAACTCCATAAACGCCTCATATCCTGTTAAC                                     >  SRR4302541.6835876/1‑94 (MQ=60)

                                                          GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACC                                    >  SRR4302541.7680322/1‑94 (MQ=60)

                                                          GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACC                                    >  SRR4302541.7680617/1‑94 (MQ=60)

                                                          GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACC                                    >  SRR4302541.8232576/1‑94 (MQ=60)

                                                           TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCC                                   >  SRR4302541.4726113/1‑94 (MQ=60)

                                                            TTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCG                                  >  SRR4302541.1657508/1‑94 (MQ=60)

                                                               TGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCA                               >  SRR4302541.780045/1‑94 (MQ=60)

                                                                GATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATCTCCTGTTAACCCGGCAA                              >  SRR4302541.4912105/1‑94 (MQ=60)

                                                                GATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAA                              >  SRR4302541.5698251/1‑94 (MQ=60)

                                                                GATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAA                              <  SRR4302541.8453929/94‑1 (MQ=60)

                                                                GATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAA                              >  SRR4302541.4912104/1‑94 (MQ=60)

                                                                 ATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAAT                             >  SRR4302541.4138676/1‑94 (MQ=60)

                                                                  TGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATA                            <  SRR4302541.6425323/94‑1 (MQ=60)

                                                                  TGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATA                            <  SRR4302541.4290996/94‑1 (MQ=60)

                                                                   GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                           >  SRR4302541.185069/1‑94 (MQ=60)

                                                                    ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                          >  SRR4302541.2210279/1‑94 (MQ=60)

                                                                    ATAAATCCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                          <  SRR4302541.1796971/94‑1 (MQ=60)

                                                                     TAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATC                         <  SRR4302541.5206215/94‑1 (MQ=60)

                                                                      AAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTACCCCGGCAATAATCT                        >  SRR4302541.301496/1‑94 (MQ=60)

                                                                      AAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCT                        >  SRR4302541.3440924/1‑94 (MQ=60)

                                                                      AAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCT                        >  SRR4302541.6678296/1‑94 (MQ=60)

                                                                       AATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTC                       >  SRR4302541.1790941/1‑94 (MQ=60)

                                                                        ATGCAGGGTCGAATGCGGCGC‑ATCGGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCC                      <  SRR4302541.3358575/94‑1 (MQ=60)

                                                                         TGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCG                     <  SRR4302541.669923/94‑1 (MQ=60)

                                                                         TGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCG                     >  SRR4302541.3900936/1‑94 (MQ=60)

                                                                          GCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGC                    >  SRR4302541.4898870/1‑94 (MQ=60)

                                                                           CAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCC                   >  SRR4302541.825827/1‑94 (MQ=60)

                                                                           CAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCC                   >  SRR4302541.7853625/1‑94 (MQ=60)

                                                                            AGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCG                  >  SRR4302541.7101927/1‑94 (MQ=60)

                                                                            AGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCG                  >  SRR4302541.280595/1‑94 (MQ=60)

                                                                             GTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGG                 >  SRR4302541.2121535/1‑94 (MQ=60)

                                                                             GTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGG                 >  SRR4302541.5484647/1‑94 (MQ=60)

                                                                               GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT               >  SRR4302541.1388338/1‑94 (MQ=60)

                                                                               GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT               <  SRR4302541.6502577/94‑1 (MQ=60)

                                                                                TCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG              <  SRR4302541.7117308/94‑1 (MQ=60)

                                                                                TCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG              >  SRR4302541.1254608/1‑94 (MQ=60)

                                                                                TCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG              >  SRR4302541.3736704/1‑94 (MQ=60)

                                                                                TCGGATGCGGC‑CCATCCGCCACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG              <  SRR4302541.1633390/94‑1 (MQ=60)

                                                                                 CGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGC             >  SRR4302541.5211905/1‑94 (MQ=60)

                                                                                 CGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGC             <  SRR4302541.1229246/94‑1 (MQ=60)

                                                                                  GGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCT            >  SRR4302541.6693763/1‑94 (MQ=60)

                                                                                  GGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCT            >  SRR4302541.2751176/1‑94 (MQ=60)

                                                                                   GATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTG           <  SRR4302541.221790/94‑1 (MQ=60)

                                                                                      GCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA        >  SRR4302541.7380607/1‑94 (MQ=60)

                                                                                       CGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACAC       >  SRR4302541.1853311/1‑94 (MQ=60)

                                                                                       CGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACAC       >  SRR4302541.891906/1‑94 (MQ=60)

                                                                                       CGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACAC       >  SRR4302541.8521994/1‑94 (MQ=60)

                                                                                       CGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACAC       <  SRR4302541.4694927/94‑1 (MQ=60)

                                                                                       CGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACAC       >  SRR4302541.544455/1‑94 (MQ=60)

                                                                                        GGCGC‑ATCTGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACA      >  SRR4302541.90304/1‑94 (MQ=60)

                                                                                        GGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATGCTGTTAACCCGGCAATAATCTACGCCGGATGCTGACACA      >  SRR4302541.8916510/1‑94 (MQ=60)

                                                                                        GGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACA      <  SRR4302541.1887424/94‑1 (MQ=60)

                                                                                         GCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTACCCCGGATGCTGACACAC     >  SRR4302541.4633124/1‑94 (MQ=60)

                                                                                             CATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT  <  SRR4302541.2587229/94‑1 (MQ=60)

                                                                                             CATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT  <  SRR4302541.6783970/94‑1 (MQ=60)

                                                                                             CATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT  <  SRR4302541.1270467/94‑1 (MQ=60)

CGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT  >  NC_000913/4085582‑4085768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`