Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,228,096	A→G	N55S (AAC→AGC)	yjbC →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,228,096	0	A	G	99.7%	1134.7 / NA	327	N55S (AAC→AGC)	yjbC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (146/180); minor base T (1/0); total (147/180)
Fisher's exact test for biased strand distribution p-value = 4.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 333 total aligned reads displayed.

ATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG  >  NC_000913/4228006‑4228185

aTCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCg                                                                                         >  1:7453203/1‑93 (MQ=255)

aTCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCg                                                                                         <  1:7141070/93‑1 (MQ=255)

 tCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCgg                                                                                        <  1:2718819/93‑1 (MQ=255)

  cGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGt                                                                                       <  2:7669158/93‑1 (MQ=255)

   gCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTc                                                                                      <  1:6672384/93‑1 (MQ=255)

    cTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCa                                                                                     <  1:2168819/93‑1 (MQ=255)

    cTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCa                                                                                     <  1:4392466/93‑1 (MQ=255)

    cTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGGGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCa                                                                                     >  2:6718130/1‑93 (MQ=255)

     tataTCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAg                                                                                    >  1:8424892/1‑93 (MQ=255)

      atatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGt                                                                                   >  1:1113660/1‑93 (MQ=255)

      atatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGt                                                                                   >  1:7071571/1‑93 (MQ=255)

       tatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGtt                                                                                  >  2:4871425/1‑93 (MQ=255)

       tatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGtt                                                                                  >  2:6458898/1‑93 (MQ=255)

       tatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGtt                                                                                  <  1:909917/93‑1 (MQ=255)

       tatCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGtt                                                                                  <  1:5638049/93‑1 (MQ=255)

        atCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttg                                                                                 >  1:4838546/1‑93 (MQ=255)

         tCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttga                                                                                >  1:5511211/1‑93 (MQ=255)

          cGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgat                                                                               >  2:4829291/1‑93 (MQ=255)

          cGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgat                                                                               <  1:4702485/93‑1 (MQ=255)

           gAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgatt                                                                              <  2:5117428/93‑1 (MQ=255)

           gAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgatt                                                                              <  2:3036252/93‑1 (MQ=255)

           gAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgatt                                                                              >  2:2931651/1‑93 (MQ=255)

            aGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgattg                                                                             >  1:6274776/1‑93 (MQ=255)

            aGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgatta                                                                             >  1:5398427/1‑92 (MQ=255)

             gCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGttgattga                                                                            >  2:772211/1‑93 (MQ=255)

               aaGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAAc                                                                          >  2:3816813/1‑93 (MQ=255)

                 ggCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAACCCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCt                                                                        <  1:7920142/93‑1 (MQ=255)

                 ggCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCt                                                                        <  1:3597190/93‑1 (MQ=255)

                  gCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTc                                                                       <  2:6865192/93‑1 (MQ=255)

                  gCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTc                                                                       <  1:256660/93‑1 (MQ=255)

                  gCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTc                                                                       <  1:3225401/93‑1 (MQ=255)

                   cAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCg                                                                      >  2:2143730/1‑93 (MQ=255)

                   cAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCg                                                                      <  2:7214235/93‑1 (MQ=255)

                    aaTGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCgg                                                                     >  2:5895433/1‑93 (MQ=255)

                      tgtgtgCCTTATGGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGa                                                                   <  1:7270861/93‑1 (MQ=255)

                       ttgtTCTTTAATGCCAACCGAGCCACCATTGGCGATCAGGTGAAACCCGGCAACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGaa                                                                  <  2:5273116/92‑1 (MQ=255)

                       gtgtTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGaa                                                                  <  2:4051282/93‑1 (MQ=255)

                       gtgtTCATTAATGACAGGGGAGCAACCATTGGCAATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCgggga                                                                  <  1:7788211/93‑3 (MQ=255)

                        tgtTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAg                                                                 >  2:8601952/1‑93 (MQ=255)

                         tttCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGc                                                                <  1:3252300/92‑1 (MQ=255)

                         gtTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGc                                                                >  1:7885627/1‑93 (MQ=255)

                          ttCCTTAATGGCAAGCGAGCCACCATTGGAGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGcc                                                               <  1:383319/93‑1 (MQ=255)

                             cTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGaa                                                            <  1:1444540/93‑1 (MQ=255)

                             cTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGaa                                                            <  2:2701011/93‑1 (MQ=255)

                             cTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGaa                                                            <  2:7555593/93‑1 (MQ=255)

                              ttAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAg                                                           >  1:6380986/1‑93 (MQ=255)

                               tAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAgt                                                          >  2:6208871/1‑92 (MQ=255)

                               tAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGa                                                          <  1:8102479/93‑1 (MQ=255)

                                 aTGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGAtt                                                        <  1:8764494/93‑1 (MQ=255)

                                   ggCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTg                                                      <  2:7131635/93‑1 (MQ=255)

                                      aaGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTa                                                   >  1:6973654/1‑93 (MQ=255)

                                        gCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACt                                                 <  1:5823807/93‑1 (MQ=255)

                                         cGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACtt                                                >  2:6381381/1‑93 (MQ=255)

                                          gAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTa                                               >  1:6823581/1‑93 (MQ=255)

                                          gAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTa                                               <  1:6524162/93‑1 (MQ=255)

                                            gCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATc                                             <  2:1758116/93‑1 (MQ=255)

                                            gCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATc                                             <  1:2342438/93‑1 (MQ=255)

                                            gCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATc                                             >  2:2451854/1‑93 (MQ=255)

                                              caccaTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGc                                           >  2:2792403/1‑93 (MQ=255)

                                              caccaTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGc                                           >  2:3127129/1‑93 (MQ=255)

                                               accaTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGcc                                          >  1:3520223/1‑93 (MQ=255)

                                                ccaTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGccc                                         <  2:4974318/93‑1 (MQ=255)

                                                 caTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCt                                        <  1:1816252/93‑1 (MQ=255)

                                                  aTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTg                                       >  2:5316476/1‑93 (MQ=255)

                                                  aTTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTg                                       >  1:8560024/1‑93 (MQ=255)

                                                   ttGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGa                                      <  2:413022/93‑1 (MQ=255)

                                                   ttGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGa                                      <  2:4334061/93‑1 (MQ=255)

                                                   ttGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGa                                      <  2:1449512/93‑1 (MQ=255)

                                                       cGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACaa                                  >  1:3907033/1‑93 (MQ=255)

                                                       cGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACaa                                  <  2:6288359/93‑1 (MQ=255)

                                                       cGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACaa                                  <  2:5660671/93‑1 (MQ=255)

                                                        gATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAg                                 <  1:340307/93‑1 (MQ=255)

                                                        gATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAg                                 >  1:6092653/1‑93 (MQ=255)

                                                        gATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAg                                 >  1:8081324/1‑93 (MQ=255)

                                                        gATCAGGTGAAACCCGGCGACGTTGGGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAg                                 >  1:6396283/1‑93 (MQ=255)

                                                         aTCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGCAGATTAGGTACTTATCGCCCTGAACAAGc                                >  2:6010479/1‑93 (MQ=255)

                                                          tCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGcc                               >  1:1301361/1‑93 (MQ=255)

                                                             ggTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTATTATTCGCCTTGAACAGGCCCGt                            >  2:3518479/1‑93 (MQ=255)

                                                             ggTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGt                            >  1:7600954/1‑93 (MQ=255)

                                                              gTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGtt                           >  2:3355277/1‑93 (MQ=255)

                                                               tGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTg                          >  2:6825865/1‑93 (MQ=255)

                                                                gAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTgg                         <  2:904227/93‑1 (MQ=255)

                                                                gAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTgg                         <  2:7295142/93‑1 (MQ=255)

                                                                   aCCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTAt                      <  2:1976262/93‑1 (MQ=255)

                                                                      cGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGt                   >  1:1883314/1‑93 (MQ=255)

                                                                        gCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTaa                 <  2:7444210/93‑1 (MQ=255)

                                                                        gCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTaa                 >  1:8273232/1‑93 (MQ=255)

                                                                         cGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGGCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAg                <  2:1301831/93‑1 (MQ=255)

                                                                             gTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCTGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGcacc            <  2:4722292/93‑1 (MQ=255)

                                                                             gTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGcacc            <  1:5799792/93‑1 (MQ=255)

                                                                             gTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGcacc            >  2:8195558/1‑93 (MQ=255)

                                                                              ttGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGcacca           <  2:8000401/93‑1 (MQ=255)

                                                                               tgtgAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGcaccac          >  1:5163667/1‑93 (MQ=255)

                                                                                  gAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGa       <  1:4579749/93‑1 (MQ=255)

                                                                                  gAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGa       >  1:1352103/1‑93 (MQ=255)

                                                                                  gAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGa       >  2:8664017/1‑93 (MQ=255)

                                                                                   aaaGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGaa      >  1:4247096/1‑93 (MQ=255)

                                                                                     aGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGa    <  2:2284248/93‑1 (MQ=255)

                                                                                      gTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGAt   >  1:6100570/1‑93 (MQ=255)

                                                                                      gTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGAt   <  1:1024472/93‑1 (MQ=255)

ATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG  >  NC_000913/4228006‑4228185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCG  >  NC_000913/4228003‑4228188

CGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAG                                                                                              <  SRR4302541.802020/94‑1 (MQ=60)

CGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAG                                                                                              <  SRR4302541.6126104/94‑1 (MQ=60)

CGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGCGAAAGTAAG                                                                                              <  SRR4302541.7735782/94‑1 (MQ=60)

 GGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGC                                                                                             <  SRR4302541.5100397/94‑1 (MQ=60)

 GGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGC                                                                                             >  SRR4302541.7441494/1‑94 (MQ=60)

 GGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGC                                                                                             >  SRR4302541.6070125/1‑94 (MQ=60)

  GATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCG                                                                                            >  SRR4302541.7532804/1‑94 (MQ=60)

  GATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCG                                                                                            >  SRR4302541.8613055/1‑94 (MQ=60)

  GATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCG                                                                                            >  SRR4302541.615368/1‑94 (MQ=60)

  GATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCG                                                                                            <  SRR4302541.1661531/94‑1 (MQ=60)

   ATCGGGATATCGAGCAAGGCAATGTGTCCCTTAATGGCAAGGGAGACACCAGCGGCGATCAGGTAAAACACGGCGACGTTGTGAAAGTAAGCGG                                                                                           <  SRR4302541.2501860/94‑1 (MQ=53)

   ATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGG                                                                                           >  SRR4302541.3723254/1‑94 (MQ=60)

   ATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGG                                                                                           <  SRR4302541.7217169/94‑1 (MQ=60)

    TCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGT                                                                                          <  SRR4302541.2745947/94‑1 (MQ=60)

    TCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGT                                                                                          >  SRR4302541.8861615/1‑94 (MQ=60)

      GCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCA                                                                                        <  SRR4302541.6741075/94‑1 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       <  SRR4302541.4436401/94‑1 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       >  SRR4302541.5379352/1‑94 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       >  SRR4302541.8515949/1‑94 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       <  SRR4302541.6461063/94‑1 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       <  SRR4302541.2189790/94‑1 (MQ=60)

       CTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       <  SRR4302541.1899551/94‑1 (MQ=60)

       CTAGATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAACCCCGGCGACGTTGTGAAAGTAAGCGGTCAG                                                                                       <  SRR4302541.1899550/94‑1 (MQ=60)

        TATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGT                                                                                      <  SRR4302541.2091255/94‑1 (MQ=60)

        TATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGT                                                                                      >  SRR4302541.7146773/1‑94 (MQ=60)

        TATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGT                                                                                      >  SRR4302541.1124121/1‑94 (MQ=60)

        TATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGT                                                                                      <  SRR4302541.7740819/94‑1 (MQ=60)

         ATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTT                                                                                     <  SRR4302541.4142877/94‑1 (MQ=60)

         ATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTT                                                                                     <  SRR4302541.7398572/94‑1 (MQ=60)

          TATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTG                                                                                    <  SRR4302541.348730/94‑1 (MQ=60)

          TATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTG                                                                                    >  SRR4302541.4887866/1‑94 (MQ=60)

          TATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTG                                                                                    <  SRR4302541.1743998/94‑1 (MQ=60)

          TATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTG                                                                                    <  SRR4302541.5695696/94‑1 (MQ=60)

          TATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTG                                                                                    <  SRR4302541.918391/94‑1 (MQ=60)

           ATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGA                                                                                   >  SRR4302541.6429705/1‑94 (MQ=60)

           ATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGA                                                                                   >  SRR4302541.5567645/1‑94 (MQ=60)

            TCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGAT                                                                                  <  SRR4302541.6604544/94‑1 (MQ=60)

             CGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATT                                                                                 <  SRR4302541.7569183/94‑1 (MQ=60)

             CGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATT                                                                                 <  SRR4302541.4750426/94‑1 (MQ=60)

              GAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTG                                                                                >  SRR4302541.8900111/1‑94 (MQ=60)

              GAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTG                                                                                >  SRR4302541.6338842/1‑94 (MQ=60)

              GAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTG                                                                                <  SRR4302541.71892/94‑1 (MQ=60)

              GAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTA                                                                                >  SRR4302541.5453823/1‑94 (MQ=60)

                GCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAA                                                                              >  SRR4302541.4036218/1‑94 (MQ=60)

                  AAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACC                                                                            >  SRR4302541.3909912/1‑94 (MQ=60)

                  AAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACC                                                                            <  SRR4302541.4789821/94‑1 (MQ=60)

                  AAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACC                                                                            >  SRR4302541.1432092/1‑94 (MQ=60)

                    GGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAACCCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTC                                                                          <  SRR4302541.8007306/94‑1 (MQ=60)

                    GGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTC                                                                          <  SRR4302541.5833831/94‑1 (MQ=60)

                    GGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTC                                                                          <  SRR4302541.3633670/94‑1 (MQ=60)

                    GGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTC                                                                          >  SRR4302541.4754734/1‑94 (MQ=60)

                    GGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTC                                                                          <  SRR4302541.1978048/94‑1 (MQ=60)

                     GCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCG                                                                         <  SRR4302541.3257975/94‑1 (MQ=60)

                     GCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCG                                                                         <  SRR4302541.258743/94‑1 (MQ=60)

                      CAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGG                                                                        <  SRR4302541.4321593/94‑1 (MQ=60)

                      CAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGG                                                                        >  SRR4302541.6178172/1‑94 (MQ=60)

                       AATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGG                                                                       >  SRR4302541.7703714/1‑94 (MQ=60)

                       AATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGG                                                                       >  SRR4302541.6541396/1‑94 (MQ=60)

                         TGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAA                                                                     <  SRR4302541.7348423/94‑1 (MQ=60)

                         TGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGCTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGCA                                                                     >  SRR4302541.6177050/1‑94 (MQ=60)

                         TGTGTGCCTTATGGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAA                                                                     <  SRR4302541.7348429/94‑1 (MQ=60)

                          GTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAG                                                                    <  SRR4302541.814141/94‑1 (MQ=60)

                          GTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAG                                                                    <  SRR4302541.4850941/94‑1 (MQ=60)

                          GTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAG                                                                    >  SRR4302541.7400053/1‑94 (MQ=60)

                          GTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAG                                                                    <  SRR4302541.1459877/94‑1 (MQ=60)

                          GTGTTCATTAATGACAGGGGAGCAACCATTGGCAATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGGAG                                                                    <  SRR4302541.7871465/94‑1 (MQ=60)

                           TGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGC                                                                   >  SRR4302541.7972317/1‑94 (MQ=60)

                            TTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCC                                                                  <  SRR4302541.3285129/94‑1 (MQ=60)

                             TTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCG                                                                 <  SRR4302541.3409590/94‑1 (MQ=60)

                             TTCCTTAATGGCAAGCGAGCCACCATTGGAGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCG                                                                 <  SRR4302541.386855/94‑1 (MQ=60)

                              TCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGA                                                                >  SRR4302541.95694/1‑94 (MQ=60)

                              TCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGA                                                                <  SRR4302541.1389642/94‑1 (MQ=60)

                                CTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAG                                                              <  SRR4302541.1305104/94‑1 (MQ=60)

                                CTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAG                                                              >  SRR4302541.6446165/1‑94 (MQ=60)

                                CTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAG                                                              >  SRR4302541.7563/1‑94 (MQ=60)

                                CTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAG                                                              <  SRR4302541.1458601/94‑1 (MQ=60)

                                 TTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGA                                                             <  SRR4302541.8374961/94‑1 (MQ=60)

                                 TTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGA                                                             <  SRR4302541.6152474/94‑1 (MQ=60)

                                  TAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGAT                                                            <  SRR4302541.8191293/94‑1 (MQ=60)

                                  TAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGAT                                                            <  SRR4302541.8015868/94‑1 (MQ=60)

                                  TAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGAT                                                            <  SRR4302541.5547788/94‑1 (MQ=60)

                                   AGTGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATT                                                           <  SRR4302541.7086330/94‑1 (MQ=60)

                                    ATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTT                                                          <  SRR4302541.7166309/94‑1 (MQ=60)

                                    ATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTT                                                          >  SRR4302541.5614527/1‑94 (MQ=60)

                                    ATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTT                                                          <  SRR4302541.8858224/94‑1 (MQ=60)

                                     TGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTG                                                         <  SRR4302541.2433453/94‑1 (MQ=60)

                                       GCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCTACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGT                                                       >  SRR4302541.8467110/1‑94 (MQ=60)

                                        CAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTA                                                      >  SRR4302541.7047964/1‑94 (MQ=60)

                                        CAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTA                                                      <  SRR4302541.2337678/94‑1 (MQ=60)

                                        CAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTA                                                      <  SRR4302541.2337679/94‑1 (MQ=60)

                                         AAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTAC                                                     >  SRR4302541.7019408/1‑94 (MQ=60)

                                           GCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTT                                                   >  SRR4302541.1342515/1‑94 (MQ=60)

                                           GCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTT                                                   <  SRR4302541.8188617/94‑1 (MQ=60)

                                           GCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTT                                                   <  SRR4302541.5883014/94‑1 (MQ=60)

                                           GCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTT                                                   <  SRR4302541.5883015/94‑1 (MQ=60)

                                            CGAGCCACCATTGGCGATCAGGTGAAGCCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGACCCTCGGGAAGCCGAAGATTTGGTACTTA                                                  <  SRR4302541.5660849/94‑1 (MQ=60)

                                            CGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTA                                                  >  SRR4302541.6896607/1‑94 (MQ=60)

                                             GAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTAT                                                 <  SRR4302541.6590745/94‑1 (MQ=60)

                                              AGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATC                                                <  SRR4302541.4578466/94‑1 (MQ=60)

                                              AGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATC                                                >  SRR4302541.8700220/1‑94 (MQ=60)

                                               GCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCG                                               <  SRR4302541.2365194/94‑1 (MQ=60)

                                                CCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATAGC                                              >  SRR4302541.1329654/1‑94 (MQ=60)

                                                 CACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCC                                             >  SRR4302541.3555636/1‑94 (MQ=60)

                                                 CACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATGTGGGACTTATCGCC                                             >  SRR4302541.3568679/1‑94 (MQ=60)

                                                 CACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAACCGAAGATTTGGTACTTATCGCC                                             >  SRR4302541.649600/1‑94 (MQ=60)

                                                  ACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCC                                            >  SRR4302541.7957066/1‑94 (MQ=60)

                                                   CCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCT                                           >  SRR4302541.332818/1‑94 (MQ=60)

                                                    CATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTG                                          >  SRR4302541.8651997/1‑94 (MQ=60)

                                                    CATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTG                                          <  SRR4302541.1833904/94‑1 (MQ=60)

                                                    CATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTG                                          <  SRR4302541.548023/94‑1 (MQ=60)

                                                       TGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAAC                                       <  SRR4302541.7280997/94‑1 (MQ=60)

                                                       TGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAAC                                       >  SRR4302541.8270201/1‑94 (MQ=60)

                                                        GGCGATCAGGTGAAAGCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACA                                      <  SRR4302541.4455273/94‑1 (MQ=60)

                                                        GGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACA                                      <  SRR4302541.6852366/94‑1 (MQ=60)

                                                        GGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACA                                      <  SRR4302541.6852368/94‑1 (MQ=60)

                                                         GCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAA                                     >  SRR4302541.3946083/1‑94 (MQ=60)

                                                          GGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAG                                    <  SRR4302541.4403672/94‑1 (MQ=60)

                                                          CGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAG                                    >  SRR4302541.8169961/1‑94 (MQ=60)

                                                          CGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAG                                    >  SRR4302541.6154839/1‑94 (MQ=60)

                                                          CGATCAGGTGAAACCCGGCGACGTTGGGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAG                                    >  SRR4302541.6461571/1‑94 (MQ=60)

                                                           GATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGC                                   <  SRR4302541.343364/94‑1 (MQ=60)

                                                            ATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACACGCC                                  >  SRR4302541.3718350/1‑94 (MQ=60)

                                                            ATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCC                                  >  SRR4302541.1314191/1‑94 (MQ=60)

                                                             TCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCC                                 <  SRR4302541.8130071/94‑1 (MQ=60)

                                                             TCAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCC                                 <  SRR4302541.4646975/94‑1 (MQ=60)

                                                              CAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCG                                <  SRR4302541.1095586/94‑1 (MQ=60)

                                                              CAGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCG                                >  SRR4302541.4308041/1‑94 (MQ=60)

                                                               AGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGT                               >  SRR4302541.7682173/1‑94 (MQ=60)

                                                               AGGTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGT                               >  SRR4302541.2013699/1‑94 (MQ=60)

                                                                 GTGAAGCCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTG                             <  SRR4302541.8271543/94‑1 (MQ=60)

                                                                 GTGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTG                             >  SRR4302541.3451497/1‑94 (MQ=60)

                                                                  TGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGG                            <  SRR4302541.7336331/94‑1 (MQ=60)

                                                                  GGAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGG                            <  SRR4302541.2439052/94‑1 (MQ=60)

                                                                   GAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGT                           <  SRR4302541.5875015/94‑1 (MQ=60)

                                                                   GAAACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGT                           >  SRR4302541.3214352/1‑94 (MQ=60)

                                                                     AACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTTATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTAT                         >  SRR4302541.7144786/1‑94 (MQ=60)

                                                                     AACCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTAT                         <  SRR4302541.3267162/94‑1 (MQ=60)

                                                                       CCCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTG                       >  SRR4302541.6903261/1‑94 (MQ=60)

                                                                        CCGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGT                      >  SRR4302541.1901404/1‑94 (MQ=60)

                                                                        CCGGCGACGTTGTGAAAGAAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGT                      >  SRR4302541.2708823/1‑94 (MQ=60)

                                                                         CGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTA                     >  SRR4302541.1109395/1‑94 (MQ=60)

                                                                         CGGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTA                     <  SRR4302541.4746758/94‑1 (MQ=60)

                                                                          GGCTACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCTCCCTGAACAAGCCCGTTGGTATTGTAA                    <  SRR4302541.1286501/94‑1 (MQ=60)

                                                                          GGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAA                    <  SRR4302541.3277058/94‑1 (MQ=60)

                                                                          GGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAA                    <  SRR4302541.7702300/94‑1 (MQ=60)

                                                                          GGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAA                    >  SRR4302541.8363255/1‑94 (MQ=60)

                                                                          GGCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAA                    >  SRR4302541.8676103/1‑94 (MQ=60)

                                                                           GCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAG                   <  SRR4302541.3832646/94‑1 (MQ=60)

                                                                           GCGACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAG                   <  SRR4302541.7998613/94‑1 (MQ=60)

                                                                             GACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAGGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCA                 <  SRR4302541.6494209/94‑1 (MQ=60)

                                                                              ACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCAC                <  SRR4302541.6180772/94‑1 (MQ=60)

                                                                              ACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCAC                >  SRR4302541.3892003/1‑94 (MQ=60)

                                                                              ACGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCAC                >  SRR4302541.6160161/1‑94 (MQ=60)

                                                                               CGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACC               >  SRR4302541.5104469/1‑94 (MQ=60)

                                                                               CGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACC               <  SRR4302541.3560245/94‑1 (MQ=60)

                                                                               CGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACC               >  SRR4302541.8566196/1‑94 (MQ=60)

                                                                               CGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACC               >  SRR4302541.5073957/1‑94 (MQ=60)

                                                                               CGTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACC               <  SRR4302541.5416913/94‑1 (MQ=60)

                                                                                GTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCA              >  SRR4302541.1413001/1‑94 (MQ=60)

                                                                                GTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCA              >  SRR4302541.2611810/1‑94 (MQ=60)

                                                                                GTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCA              <  SRR4302541.5858700/94‑1 (MQ=60)

                                                                                GTTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGAACCA              >  SRR4302541.3039300/1‑94 (MQ=60)

                                                                                 TTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCAC             >  SRR4302541.8911198/1‑94 (MQ=60)

                                                                                 TTGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCAC             >  SRR4302541.5216796/1‑94 (MQ=60)

                                                                                  TGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACC            <  SRR4302541.7943813/94‑1 (MQ=60)

                                                                                  TGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACC            <  SRR4302541.5800340/94‑1 (MQ=60)

                                                                                  TGTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACC            <  SRR4302541.8178932/94‑1 (MQ=60)

                                                                                   GTGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCG           >  SRR4302541.337212/1‑94 (MQ=60)

                                                                                    TGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGA          >  SRR4302541.1365465/1‑94 (MQ=60)

                                                                                    TGAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGA          >  SRR4302541.690154/1‑94 (MQ=60)

                                                                                     GAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAA         >  SRR4302541.4289519/1‑94 (MQ=60)

                                                                                     GAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAA         <  SRR4302541.4626146/94‑1 (MQ=60)

                                                                                     GAAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAA         >  SRR4302541.6448018/1‑94 (MQ=60)

                                                                                      AAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAG        <  SRR4302541.797958/94‑1 (MQ=60)

                                                                                      AAAGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAG        <  SRR4302541.5860454/94‑1 (MQ=60)

                                                                                        AGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGAT      >  SRR4302541.2632740/1‑94 (MQ=60)

                                                                                        AGTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGAT      >  SRR4302541.6162854/1‑94 (MQ=60)

                                                                                         GTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG     <  SRR4302541.6650028/94‑1 (MQ=60)

                                                                                         GTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG     <  SRR4302541.5877593/94‑1 (MQ=60)

                                                                                         GTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG     <  SRR4302541.6371557/94‑1 (MQ=60)

                                                                                         GTAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATG     <  SRR4302541.1033930/94‑1 (MQ=60)

                                                                                          TAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGG    <  SRR4302541.8502907/94‑1 (MQ=60)

                                                                                          TAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGG    <  SRR4302541.5497701/94‑1 (MQ=60)

                                                                                          TAAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGG    <  SRR4302541.645782/94‑1 (MQ=60)

                                                                                           AAGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTGAGCACCACCGAAGATGGC   >  SRR4302541.5896184/1‑94 (MQ=60)

                                                                                            AGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCG  <  SRR4302541.4554417/94‑1 (MQ=60)

                                                                                            AGCGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCG  <  SRR4302541.868643/94‑1 (MQ=60)

CGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCG  >  NC_000913/4228003‑4228188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`