Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,247,622 A→G T164A (ACG→GCG)  malM → MalM

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,247,6220AG98.1% 1066.8 / 3.4 322T164A (ACG→GCG) malMMalM
Reads supporting (aligned to +/- strand):  ref base A (4/2);  new base G (163/153);  total (167/155)
Fisher's exact test for biased strand distribution p-value = 6.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 334 total aligned reads displayed.

CCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCC  >  NC_000913/4247532‑4247711
                                                                                          |                                                                                         
   ggCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGaa                                                                                      >  1:1043723/1‑93 (MQ=255)
   ggCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGaa                                                                                      >  1:4318110/1‑93 (MQ=255)
   ggCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGaa                                                                                      >  1:1710985/1‑93 (MQ=255)
   ggCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTAACGCGGaa                                                                                      >  2:2418011/1‑93 (MQ=255)
     cGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGaaaa                                                                                    <  1:4885456/93‑1 (MQ=255)
      gTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGaaaaa                                                                                   >  2:4383287/1‑93 (MQ=255)
       tgatgaGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAg                                                                                  <  1:3578400/93‑1 (MQ=255)
        gatgaGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGa                                                                                 <  1:5849056/93‑1 (MQ=255)
          tgaGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAtc                                                                               >  2:2594413/1‑93 (MQ=255)
          tgaGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAtc                                                                               >  2:7300387/1‑93 (MQ=255)
          tgaGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGAAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAtc                                                                               <  1:3300780/93‑1 (MQ=255)
            aGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAtctc                                                                             <  1:2595643/93‑1 (MQ=255)
             gTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGGTGGGGCAGCAAAAACTTTATGTTCTGGCCTTTACCGCGGAAAAAGAACTcc                                                                            >  2:6125879/1‑93 (MQ=255)
              tGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCATAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCca                                                                           <  1:3150800/93‑1 (MQ=255)
              tGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCca                                                                           <  2:2052250/93‑1 (MQ=255)
              tGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCca                                                                           <  2:1646412/93‑1 (MQ=255)
               gCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcag                                                                          <  2:2784083/93‑1 (MQ=255)
               gCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcag                                                                          >  1:8583271/1‑93 (MQ=255)
               gCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcac                                                                          >  2:8439133/1‑92 (MQ=255)
                cAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcagc                                                                         <  2:1002819/93‑1 (MQ=255)
                 aGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcagca                                                                        <  2:137004/93‑1 (MQ=255)
                 aGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcagca                                                                        >  1:460699/1‑93 (MQ=255)
                  gATCGGCTGGAAGGCGTTATGCGCCTGACACCGGGGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCaagcgg                                                                       >  1:1528553/1‑91 (MQ=255)
                  gATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCcagcag                                                                       >  2:7019112/1‑93 (MQ=255)
                   aTCGGCTGTAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAga                                                                      <  2:1499464/93‑1 (MQ=255)
                   aTCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAga                                                                      <  2:6644518/93‑1 (MQ=255)
                   aTCGACTGGAAGGCCTTATGCCCGTGACACCGGCGTTGGGGCAGCAAAATTTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAga                                                                      <  1:6359490/93‑1 (MQ=255)
                      ggCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAgacga                                                                   <  1:5146656/93‑1 (MQ=255)
                       gCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAgacgac                                                                  >  2:4935641/1‑93 (MQ=255)
                       gCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAAATTTATGTTCTGGTCTTTACCGCGGAACAAGATCTCCCGCAgacgac                                                                  >  2:4497179/1‑93 (MQ=255)
                        cTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGAcc                                                                 <  1:7996730/93‑1 (MQ=255)
                           gAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCaa                                                              >  1:67289/1‑93 (MQ=255)
                            aaGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAAc                                                             <  1:7732989/93‑1 (MQ=255)
                             aGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACt                                                            >  2:3847131/1‑93 (MQ=255)
                             aGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACt                                                            >  1:6139203/1‑93 (MQ=255)
                             aGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACt                                                            >  1:1957172/1‑93 (MQ=255)
                              ggCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTg                                                           >  1:5025711/1‑93 (MQ=255)
                              ggCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTg                                                           >  2:6352667/1‑93 (MQ=255)
                                  ttATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCg                                                       >  1:4770949/1‑93 (MQ=255)
                                   tATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGa                                                      >  2:3384358/1‑93 (MQ=255)
                                   tATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGa                                                      <  1:3517841/93‑1 (MQ=255)
                                        gcCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCgg                                                 >  2:8812155/1‑93 (MQ=255)
                                         ccTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGc                                                <  2:4002712/93‑1 (MQ=255)
                                         ccTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGc                                                <  2:5533008/93‑1 (MQ=255)
                                          cTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGca                                               >  2:2885858/1‑92 (MQ=255)
                                            gACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTaa                                             >  2:8083809/1‑93 (MQ=255)
                                             gcacCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTaaa                                            <  1:2234090/92‑1 (MQ=255)
                                              cacCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAg                                           >  2:3219086/1‑93 (MQ=255)
                                                ccGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGcc                                         <  2:8674336/93‑1 (MQ=255)
                                                ccGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGcc                                         >  1:6010903/1‑93 (MQ=255)
                                                  ggCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTa                                       >  1:7286561/1‑93 (MQ=255)
                                                  ggCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTa                                       <  2:7503909/93‑1 (MQ=255)
                                                  ggCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTa                                       <  1:8289102/93‑1 (MQ=255)
                                                  ggCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCATa                                       >  2:1851497/1‑93 (MQ=255)
                                                   gCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGACtct                                      >  1:3257109/1‑91 (MQ=255)
                                                    cGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATg                                     >  2:3529662/1‑93 (MQ=255)
                                                         gggCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAg                                >  2:5646935/1‑93 (MQ=255)
                                                         gggCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAg                                <  1:2055597/93‑1 (MQ=255)
                                                           gcagcaAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAggg                              <  1:7043481/93‑1 (MQ=255)
                                                           gcagcaAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAggg                              <  1:1321929/93‑1 (MQ=255)
                                                            cagcaAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGc                             <  2:6023857/93‑1 (MQ=255)
                                                             agcaAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCg                            <  2:5327901/93‑1 (MQ=255)
                                                                aaaaaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCg                         <  2:3072882/93‑1 (MQ=255)
                                                                 aaaaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCgg                        <  1:6607928/93‑1 (MQ=255)
                                                                 aaaaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCgg                        <  2:3742021/93‑1 (MQ=255)
                                                                  aaaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGt                       <  2:5079845/93‑1 (MQ=255)
                                                                  aaaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACACGGCTAAAGCCTATGCCAAGGGAGTCGGt                       >  1:7960509/1‑93 (MQ=255)
                                                                   aaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTa                      <  2:6488305/93‑1 (MQ=255)
                                                                   aaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTa                      <  1:5352377/93‑1 (MQ=255)
                                                                   aaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTa                      >  1:2410855/1‑93 (MQ=255)
                                                                   aaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTa                      <  1:3094480/93‑1 (MQ=255)
                                                                   aaCTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTa                      <  1:882174/93‑1 (MQ=255)
                                                                     cTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAAc                    <  2:5453412/93‑1 (MQ=255)
                                                                      tttATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACt                   >  2:2248125/1‑93 (MQ=255)
                                                                       ttATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTc                  >  1:8393777/1‑93 (MQ=255)
                                                                        tATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCg                 <  2:4161321/93‑1 (MQ=255)
                                                                          tGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGAt               >  1:1478309/1‑93 (MQ=255)
                                                                           gTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATc              >  2:5241493/1‑93 (MQ=255)
                                                                            ttCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATcc             <  1:379520/93‑1 (MQ=255)
                                                                             tCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATccc            <  2:7409629/93‑1 (MQ=255)
                                                                              cTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCg           <  1:8672457/93‑1 (MQ=255)
                                                                              cTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCg           >  1:5964423/1‑93 (MQ=255)
                                                                               tGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCgg          <  2:7138715/93‑1 (MQ=255)
                                                                               tGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCgg          >  1:1180017/1‑93 (MQ=255)
                                                                                ggTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGa         <  1:8421627/93‑1 (MQ=255)
                                                                                gcccTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGa         <  2:3684207/90‑1 (MQ=255)
                                                                                 ggcTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGat        <  1:2195810/91‑1 (MQ=255)
                                                                                 gTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGat        >  1:3962794/1‑93 (MQ=255)
                                                                                 gTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGat        >  1:2882070/1‑93 (MQ=255)
                                                                                 gTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGat        >  1:2666862/1‑93 (MQ=255)
                                                                                  tCTTTACCGCGGAAAAAGATTTCAAGCAGACGACCCAACTGCTCGACCCGGCAAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGata       <  2:2917067/93‑1 (MQ=255)
                                                                                  tCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGata       >  2:577411/1‑93 (MQ=255)
                                                                                  tCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGata       <  1:878856/93‑1 (MQ=255)
                                                                                  tCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGata       >  1:125984/1‑93 (MQ=255)
                                                                                   cTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGatat      >  2:4645560/1‑93 (MQ=255)
                                                                                   cTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGatat      >  1:3891356/1‑93 (MQ=255)
                                                                                   cTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGatat      <  1:2708922/93‑1 (MQ=255)
                                                                                   cTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGatat      >  1:1615443/1‑93 (MQ=255)
                                                                                     ttACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATcc    >  2:6726069/1‑93 (MQ=255)
                                                                                     ttACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATcc    >  2:8282592/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCC  >  NC_000913/4247532‑4247711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGATC  >  NC_000913/4247529‑4247715
                                                                                             |                                                                                             
GAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCG                                                                                               <  SRR4302541.5472262/94‑1 (MQ=60)
GAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCG                                                                                               <  SRR4302541.2570913/94‑1 (MQ=60)
GAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCG                                                                                               <  SRR4302541.6464037/94‑1 (MQ=60)
 AACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGC                                                                                              >  SRR4302541.8621403/1‑94 (MQ=60)
 AACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGC                                                                                              >  SRR4302541.5950700/1‑94 (MQ=60)
 AACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGC                                                                                              >  SRR4302541.8621402/1‑94 (MQ=60)
  ACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCG                                                                                             <  SRR4302541.7790747/94‑1 (MQ=60)
  ACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCG                                                                                             <  SRR4302541.2918561/94‑1 (MQ=60)
  ACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCG                                                                                             <  SRR4302541.6650591/94‑1 (MQ=60)
  ACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCG                                                                                             >  SRR4302541.2147913/1‑94 (MQ=60)
  ACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCG                                                                                             <  SRR4302541.6060334/94‑1 (MQ=60)
   CCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGG                                                                                            >  SRR4302541.4808943/1‑94 (MQ=60)
    CAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGA                                                                                           >  SRR4302541.4634255/1‑94 (MQ=60)
     AGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAA                                                                                          >  SRR4302541.2639417/1‑94 (MQ=60)
     AGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAA                                                                                          >  SRR4302541.1727734/1‑94 (MQ=60)
     AGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAA                                                                                          >  SRR4302541.1053397/1‑94 (MQ=60)
     AGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAA                                                                                          >  SRR4302541.4361224/1‑94 (MQ=60)
     AGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAA                                                                                          >  SRR4302541.6250316/1‑94 (MQ=60)
      GGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAA                                                                                         >  SRR4302541.6197000/1‑94 (MQ=60)
        CGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAA                                                                                       <  SRR4302541.4935311/94‑1 (MQ=60)
         GTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAG                                                                                      <  SRR4302541.945112/94‑1 (MQ=60)
         GTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAG                                                                                      <  SRR4302541.787648/94‑1 (MQ=60)
          TGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGA                                                                                     <  SRR4302541.3614661/94‑1 (MQ=60)
           GATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAT                                                                                    <  SRR4302541.2390757/94‑1 (MQ=60)
           GATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAT                                                                                    <  SRR4302541.5908533/94‑1 (MQ=60)
            ATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATC                                                                                   <  SRR4302541.2822281/94‑1 (MQ=60)
            ATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATC                                                                                   <  SRR4302541.5835312/94‑1 (MQ=60)
             TGAGTGCAGATCGTCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCT                                                                                  <  SRR4302541.8369597/94‑1 (MQ=60)
             TGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCT                                                                                  <  SRR4302541.2987224/94‑1 (MQ=60)
             TGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGAAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCT                                                                                  <  SRR4302541.3333962/94‑1 (MQ=60)
              GAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTC                                                                                 <  SRR4302541.5021695/94‑1 (MQ=60)
               AGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCC                                                                                <  SRR4302541.2621650/94‑1 (MQ=60)
               AGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCC                                                                                <  SRR4302541.2333074/94‑1 (MQ=60)
                 TGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCATAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAG                                                                              <  SRR4302541.3182601/94‑1 (MQ=60)
                 TGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAG                                                                              >  SRR4302541.8675409/1‑94 (MQ=60)
                 TGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAG                                                                              <  SRR4302541.606850/94‑1 (MQ=60)
                 TGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAG                                                                              >  SRR4302541.8675408/1‑94 (MQ=60)
                  GCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGC                                                                             <  SRR4302541.4579942/94‑1 (MQ=60)
                  GCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGC                                                                             <  SRR4302541.3581139/94‑1 (MQ=60)
                   CAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCA                                                                            <  SRR4302541.1613928/94‑1 (MQ=60)
                   CAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCA                                                                            <  SRR4302541.1299534/94‑1 (MQ=60)
                   CAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCA                                                                            >  SRR4302541.465083/1‑94 (MQ=60)
                   CAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCA                                                                            <  SRR4302541.3134963/94‑1 (MQ=60)
                   CAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCA                                                                            >  SRR4302541.7635886/1‑94 (MQ=60)
                    AGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGGGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCAAGCGG                                                                           >  SRR4302541.1543848/1‑94 (MQ=60)
                    AGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAG                                                                           >  SRR4302541.1290314/1‑94 (MQ=60)
                     GATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGA                                                                          <  SRR4302541.6015989/94‑1 (MQ=60)
                     GATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGA                                                                          >  SRR4302541.8908278/1‑94 (MQ=60)
                      ATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGAC                                                                         <  SRR4302541.5047387/94‑1 (MQ=60)
                      ATCGACTGGAAGGCCTTATGCCCGTGACACCGGCGTTGGGGCAGCAAAATTTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGAC                                                                         <  SRR4302541.6424516/94‑1 (MQ=60)
                       TCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACG                                                                        <  SRR4302541.3797961/94‑1 (MQ=60)
                         GGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGAC                                                                      <  SRR4302541.5199598/94‑1 (MQ=60)
                          GCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACC                                                                     <  SRR4302541.2064602/94‑1 (MQ=60)
                          GCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGCGCAGCAAAAACTTTATGTTCTGGTCTTTACAGCGGAAAAAGATCTCTAGCACACGACC                                                                     >  SRR4302541.170496/1‑94 (MQ=60)
                           CTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCC                                                                    >  SRR4302541.3869877/1‑94 (MQ=60)
                           CTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCC                                                                    >  SRR4302541.3579569/1‑94 (MQ=60)
                           CTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCC                                                                    <  SRR4302541.8084741/94‑1 (MQ=60)
                           CTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCA                                                                    >  SRR4302541.7363536/1‑94 (MQ=60)
                             GGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAA                                                                  >  SRR4302541.67845/1‑94 (MQ=60)
                              GAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAAC                                                                 >  SRR4302541.2693074/1‑94 (MQ=60)
                               AAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACT                                                                <  SRR4302541.1505632/94‑1 (MQ=60)
                               AAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACT                                                                <  SRR4302541.7815266/94‑1 (MQ=60)
                               AAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACT                                                                >  SRR4302541.2002517/1‑94 (MQ=60)
                               AAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACT                                                                >  SRR4302541.6201900/1‑94 (MQ=60)
                               AAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACT                                                                >  SRR4302541.1976042/1‑94 (MQ=60)
                                AGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTG                                                               <  SRR4302541.5174301/94‑1 (MQ=60)
                                AGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTG                                                               >  SRR4302541.5077390/1‑94 (MQ=60)
                                 GGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACTGCGGAAAAAGATCTCCAGCAGACGACCCAACTGC                                                              <  SRR4302541.1207392/94‑1 (MQ=60)
                                  GCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCT                                                             <  SRR4302541.3930437/94‑1 (MQ=60)
                                   CGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTC                                                            <  SRR4302541.8050545/94‑1 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.6696641/1‑94 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.8631824/1‑94 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.4819662/1‑94 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.8499562/1‑94 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           <  SRR4302541.277920/94‑1 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           <  SRR4302541.5076772/94‑1 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.8889114/1‑94 (MQ=60)
                                    GTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCG                                                           >  SRR4302541.6004950/1‑94 (MQ=60)
                                      TATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGCC                                                         >  SRR4302541.2198320/1‑94 (MQ=60)
                                      TATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGAC                                                         <  SRR4302541.3553227/94‑1 (MQ=60)
                                       ATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACC                                                        >  SRR4302541.5209208/1‑94 (MQ=60)
                                       ATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGAAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACC                                                        <  SRR4302541.20136/94‑1 (MQ=60)
                                         GCGGCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCG                                                      <  SRR4302541.2698631/94‑1 (MQ=60)
                                          CGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGG                                                     >  SRR4302541.224591/1‑94 (MQ=60)
                                            CCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCT                                                   >  SRR4302541.4848650/1‑94 (MQ=60)
                                              TGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAA                                                 <  SRR4302541.3547934/94‑1 (MQ=60)
                                              TGACACCAGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGTCCCAACTGCTCGACCCGGCTAA                                                 <  SRR4302541.7177074/94‑1 (MQ=60)
                                                GCACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAG                                               <  SRR4302541.2255726/94‑1 (MQ=60)
                                                ACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAG                                               <  SRR4302541.8449648/94‑1 (MQ=60)
                                                 CACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGC                                              <  SRR4302541.5256099/94‑1 (MQ=60)
                                                  ACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCC                                             >  SRR4302541.6072491/1‑94 (MQ=60)
                                                   CCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCT                                            <  SRR4302541.5674040/94‑1 (MQ=60)
                                                   CCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCT                                            <  SRR4302541.6724798/94‑1 (MQ=60)
                                                   CCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCT                                            >  SRR4302541.8332894/1‑94 (MQ=60)
                                                   CCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCT                                            <  SRR4302541.1844488/94‑1 (MQ=60)
                                                    CGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTA                                           >  SRR4302541.7364318/1‑94 (MQ=60)
                                                    CGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTA                                           >  SRR4302541.8104954/1‑94 (MQ=60)
                                                     GGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGactct                                          >  SRR4302541.3289994/1‑89 (MQ=60)
                                                     GGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTAT                                          >  SRR4302541.2234865/1‑94 (MQ=60)
                                                     GGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTAT                                          <  SRR4302541.8379254/94‑1 (MQ=60)
                                                     GGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTAT                                          >  SRR4302541.4349541/1‑94 (MQ=60)
                                                     GGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTAC                                          >  SRR4302541.1500006/1‑94 (MQ=60)
                                                      GCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATG                                         >  SRR4302541.6031671/1‑94 (MQ=60)
                                                       CGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGC                                        >  SRR4302541.7563234/1‑94 (MQ=60)
                                                        GTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCC                                       >  SRR4302541.5165619/1‑94 (MQ=60)
                                                        GTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCC                                       <  SRR4302541.4078566/94‑1 (MQ=60)
                                                        GTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGAGCTCCAGCAGACGTCCCAACGGCTCGGCCCGGCTAAAGCCTATGCC                                       <  SRR4302541.3031609/94‑1 (MQ=60)
                                                         TTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCA                                      <  SRR4302541.8807186/94‑1 (MQ=60)
                                                          TGGGGCAGCAAAAAGTTTATGTTCTGGTCATTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAA                                     <  SRR4302541.68681/94‑1 (MQ=60)
                                                           TGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAG                                    <  SRR4302541.2708248/94‑1 (MQ=60)
                                                           TGGGCAGCAAAAACTTTATGCTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAG                                    <  SRR4302541.3317051/94‑1 (MQ=60)
                                                            GGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGG                                   <  SRR4302541.2075442/94‑1 (MQ=60)
                                                            GGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGG                                   <  SRR4302541.6430629/94‑1 (MQ=60)
                                                            GGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGG                                   <  SRR4302541.6854089/94‑1 (MQ=60)
                                                            GGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGG                                   >  SRR4302541.1653902/1‑94 (MQ=60)
                                                            GGGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGG                                   <  SRR4302541.4934498/94‑1 (MQ=60)
                                                             GGCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGG                                  <  SRR4302541.849220/94‑1 (MQ=60)
                                                              GCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGC                                 <  SRR4302541.7118374/94‑1 (MQ=60)
                                                              GCAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGC                                 <  SRR4302541.1334932/94‑1 (MQ=60)
                                                               CAGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCG                                >  SRR4302541.1365858/1‑94 (MQ=60)
                                                                CGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGT                               <  SRR4302541.2700187/94‑1 (MQ=60)
                                                                AGCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGT                               <  SRR4302541.318287/94‑1 (MQ=60)
                                                                 GCAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTC                              <  SRR4302541.6622203/94‑1 (MQ=60)
                                                                  CAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCG                             >  SRR4302541.8852965/1‑94 (MQ=60)
                                                                  CAAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCG                             >  SRR4302541.1975046/1‑94 (MQ=60)
                                                                   AAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGG                            >  SRR4302541.3307331/1‑94 (MQ=60)
                                                                   AAAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGG                            <  SRR4302541.397771/94‑1 (MQ=60)
                                                                    AAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGT                           <  SRR4302541.6675638/94‑1 (MQ=60)
                                                                    AAAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACACGGCTAAAGCCTATGCCAAGGGAGTCGGT                           >  SRR4302541.8048235/1‑94 (MQ=60)
                                                                     AAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTA                          >  SRR4302541.2434564/1‑94 (MQ=60)
                                                                     AAACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTA                          >  SRR4302541.6691017/1‑94 (MQ=60)
                                                                      AACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAA                         <  SRR4302541.890244/94‑1 (MQ=60)
                                                                      AACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAA                         <  SRR4302541.346127/94‑1 (MQ=60)
                                                                      AACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAA                         <  SRR4302541.3125858/94‑1 (MQ=60)
                                                                      AACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAA                         <  SRR4302541.5407375/94‑1 (MQ=60)
                                                                       AGTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAAC                        <  SRR4302541.1679958/94‑1 (MQ=60)
                                                                       ACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAAC                        <  SRR4302541.3630737/94‑1 (MQ=60)
                                                                       ACTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAAC                        >  SRR4302541.6279249/1‑94 (MQ=60)
                                                                        CTTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACT                       <  SRR4302541.3849773/94‑1 (MQ=60)
                                                                         TTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTC                      >  SRR4302541.8484634/1‑94 (MQ=60)
                                                                         TTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTC                      >  SRR4302541.983595/1‑94 (MQ=60)
                                                                         TTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTC                      >  SRR4302541.6094177/1‑94 (MQ=60)
                                                                         TTTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTC                      <  SRR4302541.3020605/94‑1 (MQ=60)
                                                                          TTATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCG                     <  SRR4302541.3483010/94‑1 (MQ=60)
                                                                           TATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGA                    >  SRR4302541.8543131/1‑94 (MQ=60)
                                                                           TATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGATAAAGCCTATGCCAAGGGCGTCGGTAACTCGA                    >  SRR4302541.236513/1‑94 (MQ=60)
                                                                            ATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGAT                   >  SRR4302541.1142835/1‑94 (MQ=60)
                                                                            ATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGAT                   >  SRR4302541.1492818/1‑94 (MQ=60)
                                                                            ATGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGAT                   <  SRR4302541.1564744/94‑1 (MQ=60)
                                                                             TGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATC                  <  SRR4302541.4403922/94‑1 (MQ=60)
                                                                             TGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATC                  <  SRR4302541.2564149/94‑1 (MQ=60)
                                                                             TGTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATC                  >  SRR4302541.3138184/1‑94 (MQ=60)
                                                                              TTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCC                 <  SRR4302541.1592780/94‑1 (MQ=60)
                                                                              GTTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCC                 >  SRR4302541.1194032/1‑94 (MQ=60)
                                                                               TTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCC                <  SRR4302541.383016/94‑1 (MQ=60)
                                                                               TTCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCC                <  SRR4302541.3239149/94‑1 (MQ=60)
                                                                               TTCTGATCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCC                <  SRR4302541.383017/94‑1 (MQ=60)
                                                                                TCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCG               >  SRR4302541.6025220/1‑94 (MQ=60)
                                                                                TCTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCG               >  SRR4302541.8066556/1‑94 (MQ=60)
                                                                                 CTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGG              <  SRR4302541.8765266/94‑1 (MQ=60)
                                                                                 CTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGG              >  SRR4302541.1191423/1‑94 (MQ=60)
                                                                                 CTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGG              <  SRR4302541.3164355/94‑1 (MQ=60)
                                                                                 CTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGG              >  SRR4302541.5477239/1‑94 (MQ=60)
                                                                                 CTGGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGG              <  SRR4302541.4679686/94‑1 (MQ=60)
                                                                                   GGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGAT            >  SRR4302541.2911000/1‑94 (MQ=60)
                                                                                   GGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGAT            >  SRR4302541.7408322/1‑94 (MQ=60)
                                                                                   GGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGAT            >  SRR4302541.4002150/1‑94 (MQ=60)
                                                                                   GGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGAT            <  SRR4302541.8512664/94‑1 (MQ=60)
                                                                                   GGTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGAT            >  SRR4302541.2693374/1‑94 (MQ=60)
                                                                                    GTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATA           >  SRR4302541.7952742/1‑94 (MQ=60)
                                                                                    GTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATA           >  SRR4302541.126979/1‑94 (MQ=60)
                                                                                    GTCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATA           >  SRR4302541.1282896/1‑94 (MQ=60)
                                                                                    GGCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATA           <  SRR4302541.2217058/94‑1 (MQ=60)
                                                                                     TCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATAT          >  SRR4302541.3930359/1‑94 (MQ=60)
                                                                                     TCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATAT          >  SRR4302541.1631481/1‑94 (MQ=60)
                                                                                     TCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATAT          <  SRR4302541.886886/94‑1 (MQ=60)
                                                                                     GCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATAT          <  SRR4302541.1127606/94‑1 (MQ=60)
                                                                                     GCTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATAT          <  SRR4302541.2620950/94‑1 (MQ=60)
                                                                                      CTTTACCGCGGAAAAAGATCTCCAGCAGCCGCCCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATC         <  SRR4302541.8716766/94‑1 (MQ=60)
                                                                                      CTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATC         <  SRR4302541.8716767/94‑1 (MQ=60)
                                                                                      CTTTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATC         <  SRR4302541.2735887/94‑1 (MQ=60)
                                                                                        TTACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCC       <  SRR4302541.6038829/94‑1 (MQ=60)
                                                                                         TACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCC      >  SRR4302541.8780491/1‑94 (MQ=60)
                                                                                         TACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCC      <  SRR4302541.1350078/94‑1 (MQ=60)
                                                                                         TACCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCC      <  SRR4302541.8460606/94‑1 (MQ=60)
                                                                                           CCGCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGA    >  SRR4302541.6264615/1‑94 (MQ=60)
                                                                                             GCGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGATC  <  SRR4302541.3080825/94‑1 (MQ=60)
                                                                                             |                                                                                             
GAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGATC  >  NC_000913/4247529‑4247715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑