Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,130,398 |
A→G |
D68G (GAC→GGC) |
metF → |
5,10‑methylenetetrahydrofolate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,130,398 | 0 | A | G | 100.0%
| 836.8
/ NA
| 240 | D68G (GAC→GGC) | metF | 5,10‑methylenetetrahydrofolate reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (126/114); total (126/114) |
Only 100 of 246 total aligned reads displayed.
AGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACG > NC_000913/4130308‑4130487
|
gCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCg > 2:1533908/1‑93 (MQ=255)
aGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTa < 2:6159472/93‑1 (MQ=255)
gACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTAc > 2:4026131/1‑93 (MQ=255)
gACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTAc > 1:6060053/1‑93 (MQ=255)
cccTGTGGAACTCCATCGATCGCCTTAGCAGCCTGACACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGc < 2:2879686/93‑1 (MQ=255)
ccTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGca < 1:323936/93‑1 (MQ=255)
cTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGcac < 2:887680/93‑1 (MQ=255)
cTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGcac < 1:5054785/93‑1 (MQ=255)
tgGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGc < 1:5679014/93‑1 (MQ=255)
tgGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGc < 2:377445/93‑1 (MQ=255)
ggAACTCCATCGATCTCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCa < 1:4729761/93‑1 (MQ=255)
ggAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCa > 1:5960088/1‑93 (MQ=255)
ggAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCa < 2:3131992/93‑1 (MQ=255)
ggAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCa > 1:4109180/1‑93 (MQ=255)
gaccTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTTACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCat < 1:1810864/90‑1 (MQ=255)
gAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCat < 1:3877133/93‑1 (MQ=255)
aaCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCatt < 1:4893041/93‑1 (MQ=255)
aCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCatta > 1:2430813/1‑93 (MQ=255)
cTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCattat < 2:2130513/93‑1 (MQ=255)
tCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCattatt > 2:4617930/1‑93 (MQ=255)
ccATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCAttatta > 2:1850328/1‑93 (MQ=255)
cATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTaa < 1:3391084/93‑1 (MQ=255)
cATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTaa > 2:4559089/1‑93 (MQ=255)
atcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTaaa < 2:4702368/93‑1 (MQ=255)
tcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAg > 1:378245/1‑93 (MQ=255)
tcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAg < 2:2180009/93‑1 (MQ=255)
tcgatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAg > 1:2225012/1‑93 (MQ=255)
gatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGc > 1:1783514/1‑93 (MQ=255)
gatcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGc < 2:4444040/93‑1 (MQ=255)
atcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCa > 2:2546841/1‑93 (MQ=255)
atcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCa > 1:4646410/1‑93 (MQ=255)
tcgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCAt < 1:5199929/93‑1 (MQ=255)
cgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCAtt < 1:5431535/93‑1 (MQ=255)
cgCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCAtt > 1:2571834/1‑93 (MQ=255)
cTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTaaa > 2:1976694/1‑93 (MQ=255)
ttAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAg > 2:1928827/1‑93 (MQ=255)
ttAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAg > 1:582567/1‑93 (MQ=255)
ttAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAg > 2:1330990/1‑93 (MQ=255)
tAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGa < 1:4397062/93‑1 (MQ=255)
gcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATc < 2:3997631/93‑1 (MQ=255)
gcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATc < 2:2450505/93‑1 (MQ=255)
gcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATc < 1:3091395/93‑1 (MQ=255)
gcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATc > 1:1171949/1‑93 (MQ=255)
gcagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATc > 1:6192474/1‑93 (MQ=255)
cagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCg < 1:2519288/93‑1 (MQ=255)
cagcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCg > 2:4087600/1‑93 (MQ=255)
agcCTGAAGCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTCCGCACAGCATTATTAAAGGCATTAAAGATCGc < 2:5207827/93‑1 (MQ=255)
agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGc > 1:975710/1‑93 (MQ=255)
agcCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGc > 2:4804380/1‑93 (MQ=255)
cTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACt > 1:6077137/1‑93 (MQ=255)
aaaCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGt < 1:4226360/93‑1 (MQ=255)
aaaCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGt > 2:6362375/1‑93 (MQ=255)
aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCt > 2:3717426/1‑93 (MQ=255)
aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCt > 2:49084/1‑93 (MQ=255)
aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCt < 1:6300699/93‑1 (MQ=255)
aCCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCt < 1:292439/93‑1 (MQ=255)
ccGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGAGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTg > 1:1066316/1‑93 (MQ=255)
gAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa < 2:3594961/93‑1 (MQ=255)
gAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGa > 2:5319460/1‑93 (MQ=255)
aaGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGaa > 2:5952593/1‑93 (MQ=255)
aaGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGaa > 2:3415601/1‑93 (MQ=255)
aGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAg > 2:5912165/1‑93 (MQ=255)
aGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAg > 2:4254223/1‑93 (MQ=255)
gTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGc > 2:5467504/1‑93 (MQ=255)
tttGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCg < 2:1896952/93‑1 (MQ=255)
tttGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCg < 1:2832768/93‑1 (MQ=255)
tGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGc < 1:4085028/93‑1 (MQ=255)
tGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGc > 1:1364978/1‑93 (MQ=255)
tATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAc < 1:4576571/93‑1 (MQ=255)
tATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAc < 2:2744164/93‑1 (MQ=255)
aTCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc > 2:5136066/1‑93 (MQ=255)
aTCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAcc < 2:363999/93‑1 (MQ=255)
tCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCg > 2:3525517/1‑93 (MQ=255)
tCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCg < 1:553271/93‑1 (MQ=255)
tCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCg < 2:5273534/93‑1 (MQ=255)
gTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCAt > 2:5986714/1‑93 (MQ=255)
gACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCt > 2:1702115/1‑93 (MQ=255)
ccTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTa > 1:917540/1‑93 (MQ=255)
tATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt < 1:4347994/93‑1 (MQ=255)
tATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt > 2:4334436/1‑93 (MQ=255)
tATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACt < 1:170938/93‑1 (MQ=255)
aTGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACtt > 2:5771682/1‑93 (MQ=255)
ggCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGc > 2:3291492/1‑93 (MQ=255)
gcgAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCAtt > 2:6134169/1‑93 (MQ=255)
gAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGa < 2:1312206/93‑1 (MQ=255)
gAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGa < 1:3647962/93‑1 (MQ=255)
aaCTCCGGCGAGCTCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACGGCATCTTACTTGCATTGAt > 2:929779/1‑93 (MQ=255)
aaCTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTACAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt < 1:2182508/93‑1 (MQ=255)
aaCTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt < 1:3579006/93‑1 (MQ=255)
aaCTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt > 1:3431872/1‑93 (MQ=255)
aaCTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAt < 1:1957596/93‑1 (MQ=255)
aaCTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGCCTGGAAGCGGCACCGCATCTTACTTGCATTGAt < 2:2268398/93‑1 (MQ=255)
cTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGc < 1:5859723/93‑1 (MQ=255)
tCCGGCGAGCGCGGCCGTACGCATAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCg < 2:753152/93‑1 (MQ=255)
tCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCg > 2:2967626/1‑93 (MQ=255)
ggCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGCTCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACg < 1:6377624/93‑1 (MQ=255)
gCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGc < 1:691770/93‑1 (MQ=255)
cGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGcc < 1:5898586/93‑1 (MQ=255)
cgcgGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCcgac > 1:1998537/1‑93 (MQ=255)
gcgGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCcgacg > 1:101890/1‑93 (MQ=255)
|
AGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACG > NC_000913/4130308‑4130487
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCT > NC_000913/4130305‑4130491
|
TGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGG < SRR4302534.1600837/94‑1 (MQ=60)
TGGACCATACCCTGCGGAACTCCATCGATCGCCCTAGCAGCCTGAAACCGAAGTTTGTATTGGTGACCTATGGCGCGAACTCCGGCGAGCGCGG > SRR4302534.2179292/1‑94 (MQ=60)
GGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGC < SRR4302534.95218/94‑1 (MQ=60)
GAGCAGACCCTGTGGACCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.3545483/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.5897858/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.4288951/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.555339/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.264019/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.2240535/94‑1 (MQ=60)
GAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGACTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCC < SRR4302534.220148/94‑1 (MQ=60)
AGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCG > SRR4302534.5149886/1‑94 (MQ=60)
AGCAGACCCTGGGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGCCCTATGGCGCGAACTCCGGCGAGCGCGGCCG < SRR4302534.5569534/94‑1 (MQ=60)
GCAGACCCTGTGGACTTCCATAGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTCACCTATGGCGCGAACTCCGGCGAGCGCGGCCGT < SRR4302534.4134173/94‑1 (MQ=60)
CAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTA > SRR4302534.5578546/1‑94 (MQ=60)
AGACCCTGTGGCACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTAC < SRR4302534.4437433/94‑1 (MQ=60)
AGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTAC > SRR4302534.6224839/1‑94 (MQ=60)
GACCCTCTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGACCTCCGGCGACCGCGGCCGTACG < SRR4302534.4393115/94‑1 (MQ=60)
ACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGC > SRR4302534.5713834/1‑94 (MQ=60)
ACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGC > SRR4302534.4828383/1‑94 (MQ=60)
CCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCAC < SRR4302534.332262/94‑1 (MQ=60)
CCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCAC < SRR4302534.3770139/94‑1 (MQ=60)
CTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACA < SRR4302534.5191301/94‑1 (MQ=60)
TGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAG < SRR4302534.2371580/94‑1 (MQ=60)
TGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCA > SRR4302534.4219712/1‑94 (MQ=60)
TGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCA > SRR4302534.2264719/1‑94 (MQ=60)
TGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCA < SRR4302534.5832771/94‑1 (MQ=60)
TGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCA > SRR4302534.3294656/1‑94 (MQ=60)
TGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCA > SRR4302534.6121910/1‑94 (MQ=60)
GGAACTCCATCGATCTCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCAT < SRR4302534.4858197/94‑1 (MQ=60)
GGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCAT < SRR4302534.6172844/94‑1 (MQ=60)
GACCTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTTACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATT < SRR4302534.1857890/94‑1 (MQ=60)
GAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATT < SRR4302534.3981230/94‑1 (MQ=60)
GAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATT < SRR4302534.2965759/94‑1 (MQ=60)
AACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTA > SRR4302534.2495432/1‑94 (MQ=60)
AACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTA < SRR4302534.5025706/94‑1 (MQ=60)
CTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATT < SRR4302534.14829/94‑1 (MQ=60)
CTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATT > SRR4302534.6241135/1‑94 (MQ=60)
TCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTA > SRR4302534.4652635/1‑94 (MQ=60)
TCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTA > SRR4302534.1774880/1‑94 (MQ=60)
CCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAA > SRR4302534.6062528/1‑94 (MQ=60)
CATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAA < SRR4302534.3482039/94‑1 (MQ=60)
ATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAG > SRR4302534.387915/1‑94 (MQ=60)
ATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAG > SRR4302534.2283940/1‑94 (MQ=60)
ATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAG > SRR4302534.2153475/1‑94 (MQ=60)
CGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGC > SRR4302534.4907403/1‑94 (MQ=60)
CGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGC > SRR4302534.1072969/1‑94 (MQ=60)
CGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGC > SRR4302534.1829829/1‑94 (MQ=60)
CGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGC > SRR4302534.1235369/1‑94 (MQ=60)
GATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCA > SRR4302534.4772536/1‑94 (MQ=60)
GATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCA < SRR4302534.516588/94‑1 (MQ=60)
ATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCAT > SRR4302534.2325781/1‑94 (MQ=60)
ATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCAT > SRR4302534.6000237/1‑94 (MQ=60)
TCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATT > SRR4302534.2639984/1‑94 (MQ=60)
TCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATT < SRR4302534.5340203/94‑1 (MQ=60)
CGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTA < SRR4302534.2518930/94‑1 (MQ=60)
CGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTA < SRR4302534.5577755/94‑1 (MQ=60)
GACTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAA < SRR4302534.2599648/94‑1 (MQ=60)
CCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAA > SRR4302534.128031/1‑94 (MQ=60)
CCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAA > SRR4302534.3740819/1‑94 (MQ=60)
CTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAG > SRR4302534.6491238/1‑94 (MQ=60)
CTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAG > SRR4302534.596826/1‑94 (MQ=60)
TTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGA < SRR4302534.3395482/94‑1 (MQ=60)
TAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGAT < SRR4302534.4515689/94‑1 (MQ=60)
TAGCAGCCTGAAACCGAAGTATGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGAT > SRR4302534.6441520/1‑94 (MQ=60)
AGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATC > SRR4302534.652459/1‑94 (MQ=60)
AGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATC > SRR4302534.6360967/1‑94 (MQ=60)
AGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATC > SRR4302534.1202754/1‑94 (MQ=60)
AGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATC < SRR4302534.2772488/94‑1 (MQ=60)
GCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCG < SRR4302534.3172691/94‑1 (MQ=60)
CAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGC > SRR4302534.4826768/1‑94 (MQ=60)
CAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGC > SRR4302534.1000595/1‑94 (MQ=60)
CAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGC < SRR4302534.2586174/94‑1 (MQ=60)
AGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCA > SRR4302534.5799217/1‑94 (MQ=60)
GCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCAC < SRR4302534.1904336/94‑1 (MQ=60)
CCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACT < SRR4302534.6043350/94‑1 (MQ=60)
CCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACT > SRR4302534.6242397/1‑94 (MQ=60)
AAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTC > SRR4302534.4338668/1‑94 (MQ=60)
AAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTC < SRR4302534.4340269/94‑1 (MQ=60)
ACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTG > SRR4302534.978960/1‑94 (MQ=60)
ACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTG < SRR4302534.300003/94‑1 (MQ=60)
ACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTG < SRR4302534.6471088/94‑1 (MQ=60)
ACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTG < SRR4302534.4714286/94‑1 (MQ=60)
ACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGAGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTG > SRR4302534.1093959/1‑94 (MQ=60)
CCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGG > SRR4302534.2106078/1‑94 (MQ=60)
GAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAA < SRR4302534.4171163/94‑1 (MQ=60)
GAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAA > SRR4302534.6307411/1‑94 (MQ=60)
AGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGC > SRR4302534.5543143/1‑94 (MQ=60)
GTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCG < SRR4302534.4538489/94‑1 (MQ=60)
GTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCG < SRR4302534.3518910/94‑1 (MQ=60)
TTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGG < SRR4302534.2907203/94‑1 (MQ=60)
TTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGC > SRR4302534.1400933/1‑94 (MQ=60)
TGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCA < SRR4302534.4194721/94‑1 (MQ=60)
TGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCA > SRR4302534.2694520/1‑94 (MQ=60)
GTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCAC > SRR4302534.6582492/1‑94 (MQ=60)
TATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACC < SRR4302534.4700688/94‑1 (MQ=60)
TCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGC < SRR4302534.566910/94‑1 (MQ=60)
TCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGC > SRR4302534.1811128/1‑94 (MQ=60)
TCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGC > SRR4302534.3769762/1‑94 (MQ=60)
CGGTGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCA > SRR4302534.188254/1‑94 (MQ=60)
TGACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCT > SRR4302534.5836863/1‑94 (MQ=60)
GACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTT < SRR4302534.3085875/94‑1 (MQ=60)
ACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTA > SRR4302534.940887/1‑94 (MQ=60)
ACCTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTA > SRR4302534.4134177/1‑94 (MQ=60)
CTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACT > SRR4302534.854108/1‑94 (MQ=60)
CTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACT > SRR4302534.4468239/1‑94 (MQ=60)
CTATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACT > SRR4302534.1202551/1‑94 (MQ=60)
TATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTT < SRR4302534.175450/94‑1 (MQ=60)
TATGGCGCGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTT < SRR4302534.4465391/94‑1 (MQ=60)
CGCGAACTCCGGCGAGCGCCGCCCTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTCGCCTGGTAGCCGCACCGCATCTTACCTGCACT > SRR4302534.6361454/1‑94 (MQ=60)
CGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGA < SRR4302534.3110762/94‑1 (MQ=60)
CGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGA > SRR4302534.1852913/1‑94 (MQ=60)
CGAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGA > SRR4302534.3649832/1‑94 (MQ=60)
GAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAT < SRR4302534.3745995/94‑1 (MQ=60)
GAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAT > SRR4302534.3524078/1‑94 (MQ=60)
GAACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGAT < SRR4302534.3673513/94‑1 (MQ=60)
AACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTACAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATG < SRR4302534.2240199/94‑1 (MQ=60)
AACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATG < SRR4302534.2008819/94‑1 (MQ=60)
AACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATG < SRR4302534.3675262/94‑1 (MQ=60)
ACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGC < SRR4302534.2041160/94‑1 (MQ=60)
ACTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGC > SRR4302534.4415717/1‑94 (MQ=60)
CTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCG < SRR4302534.6018822/94‑1 (MQ=60)
CTCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATAAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCG < SRR4302534.6346076/94‑1 (MQ=60)
TCCGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGA > SRR4302534.3886099/1‑94 (MQ=60)
TCCGGCGAGCGCGGCCGTACCCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGA < SRR4302534.5256122/94‑1 (MQ=60)
CGGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGAC < SRR4302534.419233/94‑1 (MQ=60)
CGGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACG < SRR4302534.6038445/94‑1 (MQ=60)
GGCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGCTCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGC < SRR4302534.6549884/94‑1 (MQ=60)
GCGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCC < SRR4302534.708706/94‑1 (MQ=60)
CGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCC > SRR4302534.734798/1‑94 (MQ=60)
CGAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCC < SRR4302534.6058745/94‑1 (MQ=60)
GAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCG > SRR4302534.3482002/1‑94 (MQ=60)
GAGCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCG < SRR4302534.6159262/94‑1 (MQ=60)
GCGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGAC > SRR4302534.2050868/1‑94 (MQ=60)
CGCGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACG > SRR4302534.104607/1‑94 (MQ=60)
CGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGTTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAG < SRR4302534.1711981/94‑1 (MQ=60)
CGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAG > SRR4302534.1765172/1‑94 (MQ=60)
CGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAG > SRR4302534.3600745/1‑94 (MQ=60)
CGGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAG > SRR4302534.4074182/1‑94 (MQ=60)
GGCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGC < SRR4302534.3048179/94‑1 (MQ=60)
GCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCT > SRR4302534.690033/1‑94 (MQ=60)
GCCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCT < SRR4302534.4979294/94‑1 (MQ=60)
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TGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCT > NC_000913/4130305‑4130491
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
