Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F36 I0 R1
|
151 |
8012.5 |
7490824 |
98.1% |
7348498 |
134.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,951,538 |
C→A |
18.1% |
A44A (GCC→GCA) |
topA → |
type I DNA topoisomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,951,538 | 0 | C | A | 18.1%
| 231.4
/ 10.2
| 137 | A44A (GCC→GCA) | topA | type I DNA topoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (80/27); new base A (2/27); total (83/54) |
| Fisher's exact test for biased strand distribution p-value = 1.96e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 140 total aligned reads displayed.
GGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGA > NZ_CP022686/4951400‑4951675
|
ggTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCa > 7:635186/1‑140 (MQ=255)
tGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGAATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCa > 5:915616/1‑138 (MQ=255)
attatGGTTAATGCTATTGTCATCGTTGAGTCCCCGGCAAAAGCAAAAACGATCAACAATTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCaaaaa < 7:512168/138‑1 (MQ=255)
atGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAag > 5:184410/1‑138 (MQ=255)
ggTAACGCGCTTGTCAGCGTTGAGGCCCCGGAAAAAGCAAAAACTATCAACAAGTATCTGGGTAGTGAATCGGGGGTTAAATCCAGCGGCGGCCACATCCGCGATTTGCCGACCTGTGGCTAAACTGCAAAAAAGAGt < 6:279463/138‑1 (MQ=255)
gTAAAGCTGTTGTCATTGTTGATGCCCCTGCAAAACCAAAAACGATCAACAAGTTTCTTGGTAGTTAAAACGTGGTGAAATCCAGCGTGTGTCAAATCCGCTTTTTGCCGACCTGTGGCTCAACGGCAAAAATGAGTg < 2:667082/138‑1 (MQ=255)
gTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTg > 1:33964/1‑138 (MQ=255)
gTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTg > 3:883022/1‑138 (MQ=255)
gTAAAGCTCTTGTCATCGGGGAGGCCCCGGCAAAAGCCAAAACGCTCAACAAGTATCTGCGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGAATTGCCGCCCAGTGGCTCAACTGCCACAAAGAGTGcc > 7:460728/1‑140 (MQ=255)
tAAAGCTATTGTCATCGTTGCGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTCACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTGAACTGCCAAAAAGAGTGc > 1:124384/1‑138 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCTGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAATAAGAGTGcc > 2:482308/1‑138 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGcc > 4:762356/1‑138 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGcc > 3:633317/1‑138 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGcc > 2:508727/1‑138 (MQ=255)
aaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 8:816484/1‑140 (MQ=255)
gCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGCCTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 5:352595/1‑138 (MQ=255)
gCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 1:921118/1‑138 (MQ=255)
gCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 6:676511/1‑138 (MQ=255)
tctTGTCATAGTTGAGTCCCCGGCACAAGCCAAAACGATCAAGAAGTATCTGGGTAGTGACTCCGTGGAGAAATCCCGCGACGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCAAAAAAGAGTGCCGActc > 2:319372/1‑138 (MQ=255)
ttttCATCGTTGAGTCCCGGGCAAAAGCAAAACCGATAAACAAGTATGTGGGTCGTGACTCCGTGGTTAATTCCTGGGGCGGGCACATCGGCTATTTGCCGACCAGGGGCACAACTGCCAAAAAGAGTGCCGACTCTa < 2:349530/135‑1 (MQ=255)
gTCATCGTTGAGTCCCCGGCAAAAGCCAAAAAGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTc > 7:573826/1‑140 (MQ=255)
tCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGCCGCCTCTACCt > 2:49607/1‑138 (MQ=255)
cGTTGAGTCACCGGCTAAAGACAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGAGTCGGTCACATCCGCTATTTGCCTCCAAGTGGCTGAACTGACAAAAATAGTGCCGACTATACCTccacca > 7:792004/1‑140 (MQ=255)
ttGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTccacca > 5:788477/1‑138 (MQ=255)
ttGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTccacca > 1:34262/1‑138 (MQ=255)
ttGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTCGCTCAACTGCAAAAAAGAGTGCCGACTCTAccaccacca > 2:844636/1‑138 (MQ=255)
ttGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGAGAAATCCAGCGTCGGTCACAACCGCGAATTGCCGACCAGTGGCACAACTGCCAAAAAGAGTGCCGACTCTACCTccacga > 4:77843/1‑136 (MQ=255)
cGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCCCCAAGACGGCTa > 1:107326/1‑138 (MQ=255)
gccaaaaccaaaacCGACCAACAAGTATCGGGGTAGTGACTCCGTGGTGAAACCCAGCGTCGGAAACATCCGCGATTGCCCGACCATTGGCTCAACTGCCAAAAACTGTGCCGACTCTACCTCCACCAAGACGGCTaa < 3:752145/136‑1 (MQ=255)
cAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCATTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTaaaa > 3:137153/1‑138 (MQ=255)
cAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTaaaa > 3:633339/1‑138 (MQ=255)
aaaaaCGATCAACATGTTTGTGGGTTGTTAATCGGTGGTTAATTCCCGGGTCGTCCAATTCCGCTATTTGCCTACCTGTGGCTCAACTTCCAAAAAGCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTaaaa < 7:663731/139‑1 (MQ=255)
aacaaGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCTGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGaa > 6:344487/1‑138 (MQ=255)
caaGTATCTGGGTAGTGACTACGTGGTCAAATCCCGCGTCGGTCACAGCCGCGTTTTGCCGACAAGTGGCTCAACTGCAAAAAAGAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACg < 5:676511/138‑1 (MQ=255)
ttttCTGGGTAGTGACTACGTGGTGAAACCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCACAACTCCAAAAACGAGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTgg < 3:765536/135‑1 (MQ=255)
gtgtcggggTAGTGACTTCGGGGTTAATTCCTGGTTGGGTCACATCCGCTTTTTGCCGCCCAGTGTCTCAACTGCCAAAACGTGCGGCGACTCTACCTCGACCAAGACGGCTAAAATGCCTAAAAAGGATGAACGTgg < 6:378672/132‑1 (MQ=255)
aTCTGGGTTGTGACTACGTGGTTAAATCCCGCGGCGTTCACATCCGCTATTTGCCGACCAGTGGCTCAACTGCAAAAATGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGct < 8:554547/140‑1 (MQ=255)
tCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcgg > 4:464740/1‑137 (MQ=255)
tGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGctc > 1:302661/1‑138 (MQ=255)
tGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGctc > 3:378068/1‑138 (MQ=255)
tGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACCGCGAAAAAGCCTAAAAAGGATGACCGTGGCGctc > 3:738984/1‑138 (MQ=255)
ggaaGTGACTACGTGGTGAAATCCCGCGTCGGTCACATCAGCCATTTGCCGACCAGTGGCTCATCTCCCAAAAAGAGTTACGACTCTACAGCCACAAAGACGGCTAAAAACCGGAACAACGATGAACGTGTAGCtctctt > 8:147380/4‑138 (MQ=255)
ggTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt > 7:134621/1‑140 (MQ=255)
tAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGATTGCCGACTCTACCTCCGCCATGACTGCTTAAAAGCCTAAAAAGGATGATCGTGGGGCTCTCgg > 3:833671/1‑137 (MQ=255)
tgttaCTCCGTGTTAAATTCAAGCGGCGTTCACTTCCGCTATTTGCCGACCAGTGGCACAACTCCAAAAAAGATGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 2:897102/134‑1 (MQ=255)
tgTGACTAGGTGGTGAAATCCCGCGTGGGTCACATCCGGTATTTGCCGACCTGTGGCTCAACTGCAAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 2:34262/137‑1 (MQ=255)
tgTGACTACGTGGTTAAAACCAGCGGCGGTCACATCCGCTTTTTCCCGACCAGTGGCTCAACTGCCAAAAAGTGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 6:184410/137‑1 (MQ=255)
cgTGCCTACGTTGTTAAATCACGTGTCGGAAACATCCGTTATTTGCCGCCCAGTTGCTCAACTGCCAAAACTTTGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 8:559081/139‑1 (MQ=255)
gTGACTCCGGGGTGAAACCCAGCGGCGGCCACATCCGCGATTTGCCGACCTGTGGCTCAACTGCAAAAACGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCa < 5:331455/138‑1 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTACACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 7:699304/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 7:212560/1‑140 (MQ=255)
gACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 3:585629/1‑138 (MQ=255)
gACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 5:140214/1‑138 (MQ=255)
tcggtggttAATTCCTGCGTCGTTAACTTCCGCTATTAGGCCACCTGTGTCTCAAATCAAAAAACTCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt < 2:781849/135‑1 (MQ=255)
tACGTGTTGAAATCCAGCGTCGTAAACACCCGCTATTTGCCGACAAGTGGCTCAACTGCAAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt < 2:452207/138‑1 (MQ=255)
tACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCCCCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCCTAACCCGt > 2:561465/1‑138 (MQ=255)
tACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt > 4:690523/1‑138 (MQ=255)
tACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt > 1:90306/1‑138 (MQ=255)
tACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACAAGGGGCTCAACTGCCAAATAGAGTGACGCCTCGACCTCCAACAAGACGGCTAAAACTCCTAAAGAGGATGCACGGGGCGCTCTCGTCaccagg > 6:207951/1‑133 (MQ=255)
tACGTGGTGAAAACCAGCGTCGGTCACATCCGCTATTTGCCGACCAGGGGCTCAACTGCAAAAACGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt < 2:447826/138‑1 (MQ=255)
cccggtgtgAACTCCCGCGGCGGCCACAGCCGCTGTGTGCCCCCCCGTGGCTCAACTGCCAAAATGCGTCCCGACGCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGGCAACCGt < 6:163509/132‑1 (MQ=255)
ccGTGGTTAAAACCCGCGGCGGCCACACCCGCTATTTGCCCACCATGGTCTCAACTCCCAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg < 7:400174/139‑1 (MQ=255)
cGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAATGGAGGAACGTGGCGCTCTCGGCAACCGTAt > 6:838058/1‑138 (MQ=255)
cGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCGCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTTAAAAGGATGCACGTGGCGCTCTCGTCAACCGTATgg > 8:536820/1‑140 (MQ=255)
gtggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg > 4:472872/1‑138 (MQ=255)
gtggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg > 5:93876/1‑138 (MQ=255)
gtggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGGGGCGATCACGACAACCGTATg > 6:417307/1‑138 (MQ=255)
ctggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACAGCCAAAAAGAGTGCCGACACTACCTCCACCAAGACGGCTAAAAAGCCAAAAAAGGATGAACGTGGCGCTCTCGTCAACCGAATg > 4:468308/2‑138 (MQ=255)
tggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATgg > 2:587440/1‑138 (MQ=255)
gttaaaTCCCGCGTCGGTCACATCCGCTTTTTGCCGACAAGTGGCTCAACTGCCAAAAATAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATgggg < 3:492848/135‑1 (MQ=255)
gAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCAAAAAAGGATGAAAGTGGCGCTCTCGTCAACCGTATGGGGGt > 1:162840/1‑138 (MQ=255)
tCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGATAAAAAGCCTAAAAAGGATGAACGAGGCGCTCTCGTCAACCGTATGGCGGTTGAc > 1:461975/1‑138 (MQ=255)
cccgCGTCGGGCACATCCGCCATGTCCCCCCCCGGGGCTCAACTGCCAAACCGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGAcc < 5:243890/135‑1 (MQ=255)
cAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACATCCACCAAGAAGGCTAAAAAGCATAAAAAGGATGAACGTGGCGCTCTCGTCAACCTTATGGGGGGTGAccc > 6:826573/1‑138 (MQ=255)
cAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTAAACTGCCAAAAAGAGTGCAGACTCTACCTCCACCAAGACGGCTAAAAAGCCAAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGAccc > 1:473596/1‑138 (MQ=255)
cAGCGGCGGGCACATCCGCGATTGGCGCCCCAGTGGCCCAACTCCCAAAAAGCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGAccc < 1:88629/138‑1 (MQ=255)
gggTCGGTCACATCCGCTTTTTGCCGACCTTTGGCTAAACTGACAAAAAGCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGt < 5:292255/136‑1 (MQ=255)
gCGTCGCGCACACCCGCGATTGGCGCACCAGTGCGCAAACGGCAAAAAAGTGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGt < 3:819959/138‑1 (MQ=255)
cGTCGGTCACATCCGCGATTTGCCGACCAGGGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCGAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGCCCCGGGGc > 7:812928/1‑140 (MQ=255)
gtgggTCACTTCCGCTATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 1:136352/135‑1 (MQ=255)
ggcGGCCACACCCGCGATTTGCCGACCAGGGGCTCAACTGCCAAAAAGAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGca < 7:9663/138‑1 (MQ=255)
tCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGc > 2:520035/1‑138 (MQ=255)
gtccacaTCCGCGATTTCCCGACCAGTGCCTAAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGcac < 5:627774/135‑1 (MQ=255)
ccacaTCCGCTCTTTGCCGACCAGGGGCTCACCTCCAAAAAACAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACaa < 2:160378/137‑1 (MQ=255)
cacaTCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAt > 1:111435/1‑138 (MQ=255)
cgacttttCCCGACCTGCGGAGCAACTCCCAAACCGCGGGCCGACTCTACCTCCACCAAGCCGGCTAAAAAGCCTAAAAAGGATGAACGTGTCGCTCTAGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAg < 5:18163/133‑1 (MQ=255)
gctaTTTGCCGACCAGGGGCTCAACTCCAAAAAATAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAgg < 5:227845/135‑1 (MQ=255)
tgATTTGCCTACCTGGGGCCCAAATGCAAAAAAGAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgc < 2:111435/137‑1 (MQ=255)
taTTTGCCGACCAGTGGCTCAAGTGCCAAAAAGTGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCa < 8:466396/139‑1 (MQ=255)
taTTGGCCGACCAGTGGCTCAACTCCCAAAAAGAGAGCCGACTCTAGCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcg < 2:475751/137‑1 (MQ=255)
tGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCACGTCAACCGTATGGGGGTTGACCCGTGGCACAAATGGGAGGCGCACTAt > 8:331098/1‑140 (MQ=255)
tGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGACTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTAt > 8:67523/1‑140 (MQ=255)
gCCGACCCGTGGCACACCTGCCAAAAATTGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATTAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTa < 4:703871/138‑1 (MQ=255)
gCCGACCAGTGGCTCAACTCCAAAAAAGAGGGACGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAACGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTa < 3:122665/138‑1 (MQ=255)
aggggCACAACTGCAAAAAAGAGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGtt < 7:293856/137‑1 (MQ=255)
tGGCTCAACTGAAAAAACGTGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCTTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGtt < 6:405628/138‑1 (MQ=255)
gCTCAACTGCCAAAAAGAGTGCCGCCTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATAGGGAGGCGCAATATGAAGTGTTGc > 4:113312/1‑138 (MQ=255)
gCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGc > 6:629132/1‑138 (MQ=255)
gCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGCTGCCTGGTAAaga > 8:219945/1‑140 (MQ=255)
cAAAAAGAGTGCCGACTCGACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAaga > 6:850315/1‑138 (MQ=255)
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GGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGA > NZ_CP022686/4951400‑4951675
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
