Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F394 I0 R1	1342	215.0	7134094	96.2%	6862998	147.9

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  CP009273/3098754‑3099051

TAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGC                                                                                                                                                      >  SRR19973066.1377902/1‑150 (MQ=60)

TAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTACATTAACCGCCCCTGACGATGCTCAGGGC                                                                                                                                                      >  SRR19973066.3079759/1‑150 (MQ=60)

   CACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAA                                                                                                                                                  <  SRR19973066.3155524/150‑1 (MQ=60)

    ACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAA                                                                                                                                                  >  SRR19973066.2499356/1‑150 (MQ=60)

    ACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAA                                                                                                                                                  >  SRR19973066.886343/1‑150 (MQ=60)

    ACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAA                                                                                                                                                 >  SRR19973066.478830/1‑150 (MQ=60)

          ACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTT                                                                                                                                            <  SRR19973066.2307490/150‑1 (MQ=60)

           tagtgactggagttcagacgtgtgctcttccgatctATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTAT                                                                                                                                          <  SRR19973066.1422307/114‑1 (MQ=60)

           CGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTAT                                                                                                                                          >  SRR19973066.1661559/1‑150 (MQ=60)

           CGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTAT                                                                                                                                          >  SRR19973066.1661537/1‑150 (MQ=60)

              CGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCA                                                                                                                                       <  SRR19973066.1427543/150‑1 (MQ=60)

              CGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCA                                                                                                                                       <  SRR19973066.2493062/150‑1 (MQ=60)

                   GATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGCTGCTCA‑GGGCCAAAATGTTATCCACATCA                                                                                                                                  >  SRR19973066.2466079/1‑150 (MQ=60)

                   GATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATC                                                                                                                                   >  SRR19973066.2619242/1‑150 (MQ=60)

                   GATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATTTTATCCACATCA                                                                                                                                  >  SRR19973066.665954/1‑150 (MQ=60)

                    ATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCA                                                                                                                                  >  SRR19973066.3289248/1‑150 (MQ=60)

                    ATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCA                                                                                                                                  >  SRR19973066.2817757/1‑150 (MQ=60)

                        TTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATT                                                                                                                             <  SRR19973066.622100/150‑1 (MQ=60)

                           TCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCG                                                                                                                          <  SRR19973066.318276/150‑1 (MQ=60)

                             AGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTT                                                                                                                        <  SRR19973066.3167431/150‑1 (MQ=60)

                               ACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTT                                                                                                                      <  SRR19973066.813027/150‑1 (MQ=60)

                                  CTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCA                                                                                                                   >  SRR19973066.2535546/1‑150 (MQ=60)

                                   TGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCA                                                                                                                   <  SRR19973066.3423862/150‑1 (MQ=60)

                                   TGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCA                                                                                                                   >  SRR19973066.116888/1‑150 (MQ=60)

                                    GACGACCCGCCATCCCTCTGCGGAATCTCGCCGTGATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAA                                                                                                                  >  SRR19973066.2823367/1‑150 (MQ=60)

                                      CGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGTCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATT                                                                                                               <  SRR19973066.1044278/150‑1 (MQ=60)

                                      CGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATT                                                                                                               <  SRR19973066.1046621/150‑1 (MQ=60)

                                       GACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTACATTAAACGCCCCAGACGATGCTCA‑GGGCAAAAATGTTATCCACAACACAATTTCGTTTTGCAAATTG                                                                                                              >  SRR19973066.933279/1‑150 (MQ=60)

                                         CCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGGTTTGCACATTGG                                                                                                             >  SRR19973066.3067846/1‑150 (MQ=60)

                                            GCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAA                                                                                                          <  SRR19973066.667984/150‑1 (MQ=60)

                                            GCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAA                                                                                                          <  SRR19973066.666968/150‑1 (MQ=60)

                                              CATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATG                                                                                                        <  SRR19973066.438287/150‑1 (MQ=60)

                                              CATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGT                                                                                                       <  SRR19973066.3005429/150‑1 (MQ=60)

                                               ATCCCTCTGCGGAATCTCGCCGTTATCTTTATAATGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTT                                                                                                      <  SRR19973066.1635685/150‑1 (MQ=60)

                                               ATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGT                                                                                                       >  SRR19973066.770991/1‑150 (MQ=60)

                                                TCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTT                                                                                                     >  SRR19973066.2341858/1‑150 (MQ=60)

                                                 CCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTCCCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAAGGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTG                                                                                                    <  SRR19973066.1929168/150‑1 (MQ=60)

                                                           AATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAACTGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTG                                                                                          <  SRR19973066.1853942/150‑1 (MQ=60)

                                                            ATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTG                                                                                          <  SRR19973066.415158/150‑1 (MQ=60)

                                                            ATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTG                                                                                          <  SRR19973066.415113/150‑1 (MQ=60)

                                                             TCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCC                                                                                        <  SRR19973066.2469001/150‑1 (MQ=60)

                                                                CGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACA                                                                                     <  SRR19973066.2752348/150‑1 (MQ=60)

                                                                  CCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGG                                                                                   <  SRR19973066.1867258/150‑1 (MQ=60)

                                                                    GTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTA                                                                                 <  SRR19973066.7805/150‑1 (MQ=60)

                                                                    GTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTA                                                                                 >  SRR19973066.3215168/1‑150 (MQ=60)

                                                                     TTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAA                                                                                >  SRR19973066.3369171/1‑150 (MQ=60)

                                                                          TTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGACTGTTTGCAATTATTTGCCACAGGTAACAAAA                                                                           >  SRR19973066.2428807/1‑150 (MQ=60)

                                                                              TAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAAC                                                                        <  SRR19973066.3048974/150‑1 (MQ=60)

                                                                              TAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAAC                                                                        <  SRR19973066.1259516/150‑1 (MQ=60)

                                                                               AAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCA                                                                      <  SRR19973066.3416014/150‑1 (MQ=60)

                                                                                AAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAG                                                                     >  SRR19973066.259811/1‑150 (MQ=60)

                                                                                  GTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTC                                                                   <  SRR19973066.2848696/150‑1 (MQ=60)

                                                                                  GTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTC                                                                   <  SRR19973066.2848646/150‑1 (MQ=60)

                                                                                   TGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATTTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCC                                                                  >  SRR19973066.3282047/1‑150 (MQ=60)

                                                                                     AATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGC                                                                >  SRR19973066.181412/1‑150 (MQ=60)

                                                                                     AATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGC                                                                >  SRR19973066.181319/1‑150 (MQ=60)

                                                                                          CGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGT                                                           >  SRR19973066.673144/1‑150 (MQ=60)

                                                                                               AAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATA                                                      <  SRR19973066.2004044/150‑1 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATA                                                      >  SRR19973066.1264442/1‑150 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATA                                                      >  SRR19973066.3048025/1‑150 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAGAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAG                                                     <  SRR19973066.478751/150‑1 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAGAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAG                                                     <  SRR19973066.478832/150‑1 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAG                                                     >  SRR19973066.3115767/1‑150 (MQ=60)

                                                                                                AAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATATTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAG                                                     <  SRR19973066.1062731/150‑1 (MQ=60)

                                                                                                  AATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAA                                                   >  SRR19973066.3437237/1‑150 (MQ=60)

                                                                                                   ATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAAT                                                  >  SRR19973066.1564495/1‑150 (MQ=60)

                                                                                                     CCTACCGCCGCCGATAAGTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCC                                                <  SRR19973066.2021580/150‑1 (MQ=60)

                                                                                                         CCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCAT                                             >  SRR19973066.3072697/1‑150 (MQ=60)

                                                                                                         CCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATC                                            <  SRR19973066.1961038/150‑1 (MQ=60)

                                                                                                         CCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATC                                            <  SRR19973066.272908/150‑1 (MQ=60)

                                                                                                         CCGCCCCCGATAATTCCATTAACCGCCCCTGACGAGGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATC                                            <  SRR19973066.1864114/150‑1 (MQ=60)

                                                                                                           GCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCAT                                          <  SRR19973066.1210369/150‑1 (MQ=60)

                                                                                                             CGCCTATATTTCAATTAACCGCCCCTGACGATGCTCA‑GGTCAAAAATGTTATCCACATCACAATTTCTTTTTGCAAATTGGGAATGTTTGCAATTTTTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCT                                        <  SRR19973066.1826547/150‑1 (MQ=60)

                                                                                                             CGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCT                                        <  SRR19973066.2301593/150‑1 (MQ=60)

                                                                                                             CGCCGATAATTCCATTAACCGCCCCTGACGATGCTCA‑GGGAAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCT                                        <  SRR19973066.1826469/150‑1 (MQ=60)

                                                                                                               CCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTC                                       <  SRR19973066.2344081/150‑1 (MQ=60)

                                                                                                                  ATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCA                                    >  SRR19973066.2417255/1‑150 (MQ=60)

                                                                                                                     ATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGG                                 >  SRR19973066.627604/1‑150 (MQ=60)

                                                                                                                         CATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAA                            >  SRR19973066.698931/1‑150 (MQ=60)

                                                                                                                         CATTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAA                            >  SRR19973066.698930/1‑150 (MQ=60)

                                                                                                                          ATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAA                            >  SRR19973066.1506522/1‑150 (MQ=60)

                                                                                                                          ATTAACCGCCCCTCACGATGCTCA‑GGGAAAAAATTTTATCACAATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAAT                           <  SRR19973066.674996/150‑1 (MQ=60)

                                                                                                                           TTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAAT                           <  SRR19973066.1294728/150‑1 (MQ=60)

                                                                                                                           TTAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATG                          <  SRR19973066.1438675/150‑1 (MQ=60)

                                                                                                                            TAACCGCCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGT                         >  SRR19973066.2639973/1‑150 (MQ=60)

                                                                                                                                  CCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTT                    <  SRR19973066.1931395/150‑1 (MQ=60)

                                                                                                                                  CCCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTT                   >  SRR19973066.2343101/1‑150 (MQ=60)

                                                                                                                                   CCCTGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTT                  >  SRR19973066.1449668/1‑150 (MQ=60)

                                                                                                                                    CCTGACGATGCTCA‑GGGCAAAAATGTTATCCAAATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGAACGGTCAAATGTGCTTTTTC                 >  SRR19973066.496955/1‑150 (MQ=60)

                                                                                                                                      TGACGATGCTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAA               >  SRR19973066.3156903/1‑150 (MQ=60)

                                                                                                                                      TGACGATGCTCA‑GGACAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAA               >  SRR19973066.1273556/1‑150 (MQ=60)

                                                                                                                                            TGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACT          <  SRR19973066.141476/150‑1 (MQ=60)

                                                                                                                                            TGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACT          <  SRR19973066.139861/150‑1 (MQ=60)

                                                                                                                                            TGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACT          <  SRR19973066.139863/150‑1 (MQ=60)

                                                                                                                                              CTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCAT       <  SRR19973066.2660711/150‑1 (MQ=60)

                                                                                                                                              CTCA‑GGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCAT       <  SRR19973066.2929149/150‑1 (MQ=60)

                                                                                                                                                 AGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCC     >  SRR19973066.635138/1‑150 (MQ=60)

                                                                                                                                                    GGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  SRR19973066.1997246/1‑150 (MQ=60)

                                                                                                                                                    GGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  SRR19973066.1997189/1‑150 (MQ=60)

                                                                                                                                                    GGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  SRR19973066.1997251/1‑150 (MQ=60)

                                                                                                                                                    GGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  SRR19973066.1687597/1‑150 (MQ=60)

TAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAATTCCATTAACCGCCCCTGACGATGCTCAGGGGCAAAAATGTTATCCACATCACAATTTCGTTTTGCAAATTGGGAATGTTTGCAATTATTTGCCACAGGTAACAAAAAACCAGTCCGCGAAGTTGATAGAATCCCATCATCTCGCACGGTCAAATGTGCTTTTTCAAACACTCATCCGCA  >  CP009273/3098754‑3099051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`