Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F534 I1 R1	1235	230.2	7611948	95.1%	7238962	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,720,180	C→A	intergenic (‑3/‑100)	ydhL ← / → nemR	DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,720,180	0	C	A	99.6%	806.5 / NA	242	intergenic (‑3/‑100)	ydhL/nemR	DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated
Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (110/131); minor base T (0/1); total (110/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 242 total aligned reads displayed.

CTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGA  >  CP009273/1720033‑1720325

ctTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGc                                                                                                                                                 >  2:658295/1‑150 (MQ=255)

   gTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcct                                                                                                                                              <  2:1379360/150‑1 (MQ=255)

    tttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctc                                                                                                                                             <  2:1746626/150‑1 (MQ=255)

    tttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctc                                                                                                                                             <  1:2159187/150‑1 (MQ=255)

     ttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctcc                                                                                                                                            >  2:3187790/1‑150 (MQ=255)

         cGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAg                                                                                                                                        <  1:2524803/150‑1 (MQ=255)

           ccATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGAt                                                                                                                                      >  2:487514/1‑150 (MQ=255)

            cATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATa                                                                                                                                     >  1:2807789/1‑150 (MQ=255)

             aTCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATaa                                                                                                                                    >  2:3512988/1‑150 (MQ=255)

             aTCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATaa                                                                                                                                    >  1:2682539/1‑150 (MQ=255)

              tCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAg                                                                                                                                   <  1:3343682/150‑1 (MQ=255)

                gCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGag                                                                                                                                 >  2:3567269/1‑149 (MQ=255)

                 cTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGatt                                                                                                                                <  1:10075/150‑1 (MQ=255)

                  tCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGatta                                                                                                                               <  2:514265/150‑1 (MQ=255)

                   cATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGattat                                                                                                                              >  2:295511/1‑150 (MQ=255)

                    aTTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGattatt                                                                                                                             <  1:2823082/150‑1 (MQ=255)

                     ttttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGAttatta                                                                                                                            >  2:334191/1‑150 (MQ=255)

                     ttttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGAttatta                                                                                                                            >  2:1988242/1‑150 (MQ=255)

                      tttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTAc                                                                                                                           <  2:1659986/150‑1 (MQ=255)

                        tATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCa                                                                                                                         >  2:3696530/1‑150 (MQ=255)

                        tATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCa                                                                                                                         <  1:2194765/150‑1 (MQ=255)

                         aTTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCat                                                                                                                        <  2:1608900/150‑1 (MQ=255)

                          ttCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCatt                                                                                                                       <  1:84742/150‑1 (MQ=255)

                              aGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTg                                                                                                                   >  1:3670738/1‑150 (MQ=255)

                                ttAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGaa                                                                                                                 <  2:2516152/150‑1 (MQ=255)

                                  aaaaCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGc                                                                                                               >  1:1902688/1‑150 (MQ=255)

                                    aaCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTg                                                                                                             <  2:419588/150‑1 (MQ=255)

                                     aCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGt                                                                                                            <  2:2628840/150‑1 (MQ=255)

                                       gCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTa                                                                                                          <  2:1777120/150‑1 (MQ=255)

                                        cTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTaa                                                                                                         <  1:1653968/150‑1 (MQ=255)

                                          catcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATg                                                                                                       <  2:1286878/150‑1 (MQ=255)

                                           atcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGt                                                                                                      <  1:294411/150‑1 (MQ=255)

                                            tcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTc                                                                                                     >  1:3116413/1‑150 (MQ=255)

                                               cGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCaa                                                                                                  >  2:462962/1‑150 (MQ=255)

                                                  cTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTATTTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGt                                                                                               <  1:3634762/150‑1 (MQ=255)

                                                   tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa                                                                                              <  2:3029545/150‑1 (MQ=255)

                                                   tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa                                                                                              <  2:2346962/150‑1 (MQ=255)

                                                   tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa                                                                                              <  2:1238308/150‑1 (MQ=255)

                                                    aCGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAg                                                                                             <  2:2214354/150‑1 (MQ=255)

                                                    aCGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAg                                                                                             <  2:1204426/150‑1 (MQ=255)

                                                     cGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGc                                                                                            <  1:3019973/150‑1 (MQ=255)

                                                      gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa                                                                                           <  2:73139/150‑1 (MQ=255)

                                                      gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa                                                                                           <  2:1516183/150‑1 (MQ=255)

                                                      gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa                                                                                           >  2:1066354/1‑150 (MQ=255)

                                                      gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa                                                                                           <  2:2855156/150‑1 (MQ=255)

                                                       aaaaCAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCaa                                                                                          >  1:1343137/1‑150 (MQ=255)

                                                            aGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttg                                                                                     >  2:3745221/1‑150 (MQ=255)

                                                            aGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttg                                                                                     >  1:1774433/1‑150 (MQ=255)

                                                               cgcgACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttgctt                                                                                  <  2:2923274/150‑1 (MQ=255)

                                                               cgcgACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttgctt                                                                                  <  2:3130109/150‑1 (MQ=255)

                                                               cgcgACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACAGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCACAGTAGCAACTttgctt                                                                                  <  2:1141491/150‑1 (MQ=255)

                                                                     aaaaCCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTa                                                                            <  1:574480/150‑1 (MQ=255)

                                                                        aCCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAc                                                                         >  2:1721281/1‑150 (MQ=255)

                                                                         cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc                                                                        <  2:1808870/150‑1 (MQ=255)

                                                                         cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc                                                                        >  1:462879/1‑150 (MQ=255)

                                                                         cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc                                                                        <  1:807192/150‑1 (MQ=255)

                                                                                          ggCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACt                                                       <  2:1895593/150‑1 (MQ=255)

                                                                                           gCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTc                                                      <  1:3750544/150‑1 (MQ=255)

                                                                                               aTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAc                                                  <  2:3677119/150‑1 (MQ=255)

                                                                                               aTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAc                                                  <  2:87022/150‑1 (MQ=255)

                                                                                                   cccGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCAt                                              >  1:988126/1‑150 (MQ=255)

                                                                                                    ccGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATg                                             >  1:1549039/1‑150 (MQ=255)

                                                                                                          cGGGCTCTGGACGGGAAAGAACTCTAAGTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaa                                       <  1:3382177/150‑1 (MQ=255)

                                                                                                           gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac                                      >  2:2551364/1‑150 (MQ=255)

                                                                                                           gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac                                      >  2:313847/1‑150 (MQ=255)

                                                                                                           gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac                                      >  2:2440604/1‑150 (MQ=255)

                                                                                                           gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac                                      >  2:2352152/1‑150 (MQ=255)

                                                                                                             gCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacac                                    >  1:1705648/1‑150 (MQ=255)

                                                                                                              ctctGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacaca                                   >  1:2348793/1‑150 (MQ=255)

                                                                                                              ctctGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacaca                                   <  1:2564418/150‑1 (MQ=255)

                                                                                                                 tGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACNg                                <  1:2960099/150‑1 (MQ=255)

                                                                                                                    aCGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAAc                             <  2:930109/150‑1 (MQ=255)

                                                                                                                    aCGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAAc                             >  1:229172/1‑150 (MQ=255)

                                                                                                                     cGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACa                            >  2:2083299/1‑150 (MQ=255)

                                                                                                                        gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa                         <  2:2334263/150‑1 (MQ=255)

                                                                                                                        gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa                         >  2:2161309/1‑150 (MQ=255)

                                                                                                                        gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa                         >  2:565409/1‑150 (MQ=255)

                                                                                                                         aaaGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGAt                        <  2:2053178/150‑1 (MQ=255)

                                                                                                                          aaGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATa                       <  1:1066354/150‑1 (MQ=255)

                                                                                                                           aGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAc                      <  1:2576770/150‑1 (MQ=255)

                                                                                                                           aGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAc                      >  1:480479/1‑150 (MQ=255)

                                                                                                                             aaCTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTc                    >  2:2820843/1‑150 (MQ=255)

                                                                                                                                 ctAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGa                >  1:3333468/1‑150 (MQ=255)

                                                                                                                                 atAATTGCTCCGCCACTTAGACCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTATACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGa                <  2:1359826/149‑1 (MQ=255)

                                                                                                                                     ttGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAt            >  1:3459172/1‑150 (MQ=255)

                                                                                                                                      tGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtc           <  1:885473/150‑1 (MQ=255)

                                                                                                                                        cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTCGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc         >  1:2724110/1‑150 (MQ=255)

                                                                                                                                        cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc         <  2:2375557/150‑1 (MQ=255)

                                                                                                                                        cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc         >  1:2489356/1‑150 (MQ=255)

                                                                                                                                         tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc        <  1:3696530/150‑1 (MQ=255)

                                                                                                                                         tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc        >  1:2327195/1‑150 (MQ=255)

                                                                                                                                         tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc        <  1:1852784/150‑1 (MQ=255)

                                                                                                                                         tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc        >  2:476450/1‑150 (MQ=255)

                                                                                                                                           cGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTg      <  2:2682539/150‑1 (MQ=255)

                                                                                                                                            gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg     >  2:2383790/1‑150 (MQ=255)

                                                                                                                                            gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg     >  2:3107321/1‑150 (MQ=255)

                                                                                                                                            gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg     <  1:1129983/150‑1 (MQ=255)

                                                                                                                                              cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg   >  2:3214605/1‑150 (MQ=255)

                                                                                                                                              cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg   >  2:1763752/1‑150 (MQ=255)

                                                                                                                                              cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg   <  1:1988242/150‑1 (MQ=255)

CTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGA  >  CP009273/1720033‑1720325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACG  >  CP009273/1720031‑1720327

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTA                                                                                                                                                     <  SRR19973061.2169681/150‑1 (MQ=60)

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTA                                                                                                                                                     >  SRR19973061.1843590/1‑150 (MQ=60)

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTA                                                                                                                                                     <  SRR19973061.2169712/150‑1 (MQ=60)

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTA                                                                                                                                                     >  SRR19973061.1207450/1‑150 (MQ=60)

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTA                                                                                                                                                     >  SRR19973061.2219916/1‑150 (MQ=60)

 TCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAG                                                                                                                                                    >  SRR19973061.2416107/1‑150 (MQ=60)

  CTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGACCTCTAATTGCTCCGCCACTTAGC                                                                                                                                                   >  SRR19973061.708201/1‑150 (MQ=60)

      TTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTC                                                                                                                                               <  SRR19973061.2164610/150‑1 (MQ=60)

           CGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAG                                                                                                                                          <  SRR19973061.2531231/150‑1 (MQ=60)

           CGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAG                                                                                                                                          <  SRR19973061.317473/150‑1 (MQ=60)

              CATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATA                                                                                                                                       >  SRR19973061.3686519/1‑150 (MQ=60)

              CATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATA                                                                                                                                       >  SRR19973061.2815000/1‑150 (MQ=60)

              CATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATA                                                                                                                                       >  SRR19973061.983132/1‑150 (MQ=60)

               ATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAA                                                                                                                                      >  SRR19973061.2689445/1‑150 (MQ=60)

                TCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAG                                                                                                                                     <  SRR19973061.3352289/150‑1 (MQ=60)

                TCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAG                                                                                                                                     <  SRR19973061.2335140/150‑1 (MQ=60)

                 CGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGA                                                                                                                                    <  SRR19973061.2550647/150‑1 (MQ=60)

                  GCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGAT                                                                                                                                   >  SRR19973061.1859458/1‑150 (MQ=60)

                   CTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATT                                                                                                                                  <  SRR19973061.2660671/150‑1 (MQ=60)

                   CTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATT                                                                                                                                  >  SRR19973061.2058344/1‑150 (MQ=60)

                   CTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATT                                                                                                                                  <  SRR19973061.10114/150‑1 (MQ=60)

                    TCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTA                                                                                                                                 <  SRR19973061.2468720/150‑1 (MQ=60)

                      ATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATT                                                                                                                               <  SRR19973061.2830317/150‑1 (MQ=60)

                      ATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATT                                                                                                                               <  SRR19973061.2829953/150‑1 (MQ=60)

                          TATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCA                                                                                                                           <  SRR19973061.2200280/150‑1 (MQ=60)

                           ATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCAT                                                                                                                          >  SRR19973061.48876/1‑150 (MQ=60)

                           ATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCAT                                                                                                                          >  SRR19973061.1966042/1‑150 (MQ=60)

                            TTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATT                                                                                                                         <  SRR19973061.85039/150‑1 (MQ=60)

                            TTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATT                                                                                                                         <  SRR19973061.84837/150‑1 (MQ=60)

                            TTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATT                                                                                                                         <  SRR19973061.3657875/150‑1 (MQ=60)

                               CAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATT                                                                                                                      <  SRR19973061.305751/150‑1 (MQ=60)

                               CAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATT                                                                                                                      <  SRR19973061.2575030/150‑1 (MQ=60)

                               CAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATT                                                                                                                      <  SRR19973061.663500/150‑1 (MQ=60)

                                AGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTG                                                                                                                     >  SRR19973061.1702755/1‑150 (MQ=60)

                                AGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTG                                                                                                                     >  SRR19973061.3680123/1‑150 (MQ=60)

                                 GTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGA                                                                                                                    >  SRR19973061.860212/1‑150 (MQ=60)

                                 GTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGA                                                                                                                    >  SRR19973061.860317/1‑150 (MQ=60)

                                    AAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGC                                                                                                                 >  SRR19973061.1907402/1‑150 (MQ=60)

                                     AAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCT                                                                                                                <  SRR19973061.289499/150‑1 (MQ=60)

                                      AACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTG                                                                                                               <  SRR19973061.2622257/150‑1 (MQ=60)

                                        CGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTT                                                                                                             >  SRR19973061.3115263/1‑150 (MQ=60)

                                          CTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAA                                                                                                           >  SRR19973061.1919242/1‑150 (MQ=60)

                                          CTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAA                                                                                                           <  SRR19973061.1658105/150‑1 (MQ=60)

                                          CTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAA                                                                                                           <  SRR19973061.1658121/150‑1 (MQ=60)

                                          CTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAA                                                                                                           >  SRR19973061.2502498/1‑150 (MQ=60)

                                            CATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATG                                                                                                         >  SRR19973061.2170092/1‑150 (MQ=60)

                                             ATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGT                                                                                                        <  SRR19973061.295199/150‑1 (MQ=60)

                                              TCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTC                                                                                                       >  SRR19973061.3124444/1‑150 (MQ=60)

                                                    CTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTATTTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGT                                                                                                 <  SRR19973061.3644054/150‑1 (MQ=60)

                                                     TACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTA                                                                                                >  SRR19973061.111110/1‑150 (MQ=60)

                                                       TGAAAACAGCCGAGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATAACCATAATTGAAGCTATTAATTTCCAAAGTAGC                                                                                              >  SRR19973061.1364647/1‑150 (MQ=60)

                                                       CGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGC                                                                                              <  SRR19973061.3027770/150‑1 (MQ=60)

                                                        GAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGAAGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCA                                                                                             <  SRR19973061.274552/150‑1 (MQ=60)

                                                         AAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAA                                                                                            >  SRR19973061.2788772/1‑150 (MQ=60)

                                                         AAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAA                                                                                            >  SRR19973061.1346513/1‑150 (MQ=60)

                                                            ACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTT                                                                                         <  SRR19973061.1823667/150‑1 (MQ=60)

                                                            ACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTT                                                                                         <  SRR19973061.298681/150‑1 (MQ=60)

                                                              AGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTG                                                                                       >  SRR19973061.1778778/1‑150 (MQ=60)

                                                              AGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTG                                                                                       >  SRR19973061.1778877/1‑150 (MQ=60)

                                                                   CGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTACTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGC                                                                                  <  SRR19973061.271228/150‑1 (MQ=60)

                                                                   CGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTACTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGC                                                                                  <  SRR19973061.2185896/150‑1 (MQ=60)

                                                                    GACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCA                                                                                 <  SRR19973061.101220/150‑1 (MQ=60)

                                                                       AAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTA                                                                              <  SRR19973061.575977/150‑1 (MQ=60)

                                                                           CCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACC                                                                          >  SRR19973061.464138/1‑150 (MQ=60)

                                                                           CCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACC                                                                          <  SRR19973061.809306/150‑1 (MQ=60)

                                                                                GTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTG                                                                     >  SRR19973061.2241472/1‑150 (MQ=60)

                                                                                    GTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCT                                                                 <  SRR19973061.296302/150‑1 (MQ=60)

                                                                                    GTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCT                                                                 >  SRR19973061.3375948/1‑150 (MQ=60)

                                                                                       AGATTGGAAAATTCCGCTGCACGGGTTCTTGACGGGAAAGAAATCTAATTGCTCCGCCACTTTGTCCTCCTAAGATAAGATTATTAACATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACT                                                              <  SRR19973061.462642/150‑1 (MQ=60)

                                                                                          CTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACA                                                           >  SRR19973061.2911659/1‑150 (MQ=60)

                                                                                             GCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTC                                                        <  SRR19973061.3760142/150‑1 (MQ=60)

                                                                                                 ATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTTTTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAC                                                    <  SRR19973061.1653703/150‑1 (MQ=60)

                                                                                                 ATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAC                                                    <  SRR19973061.3729914/150‑1 (MQ=60)

                                                                                                 AGTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAC                                                    <  SRR19973061.3553187/150‑1 (MQ=60)

                                                                                                     CCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCAT                                                >  SRR19973061.990647/1‑150 (MQ=60)

                                                                                                     CCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCAT                                                >  SRR19973061.990654/1‑150 (MQ=60)

                                                                                                      CCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATG                                               >  SRR19973061.1552888/1‑150 (MQ=60)

                                                                                                            CGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAA                                         >  SRR19973061.116359/1‑150 (MQ=60)

                                                                                                            CGGGCTCTGGACGGGAAAGAACTCTAAGTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAA                                         <  SRR19973061.3390868/150‑1 (MQ=60)

                                                                                                            CGGGCTCGGGACGGGAAAGAACTCTAAGTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTAGTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAA                                         <  SRR19973061.3390905/150‑1 (MQ=60)

                                                                                                               GCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACAC                                      >  SRR19973061.1709928/1‑150 (MQ=60)

                                                                                                                CTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACA                                     >  SRR19973061.2353960/1‑150 (MQ=60)

                                                                                                                CTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACA                                     >  SRR19973061.2354757/1‑150 (MQ=60)

                                                                                                                CTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACA                                     <  SRR19973061.2570968/150‑1 (MQ=60)

                                                                                                                   TGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACNG                                  <  SRR19973061.2967738/150‑1 (MQ=60)

                                                                                                                    GGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGA                                 <  SRR19973061.335070/150‑1 (MQ=60)

                                                                                                                      ACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAAC                               >  SRR19973061.229842/1‑150 (MQ=60)

                                                                                                                           AAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGAT                          <  SRR19973061.131221/150‑1 (MQ=60)

                                                                                                                           AAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGAT                          >  SRR19973061.445698/1‑150 (MQ=60)

                                                                                                                            AAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATA                         <  SRR19973061.1069093/150‑1 (MQ=60)

                                                                                                                             AGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAC                        <  SRR19973061.2509638/150‑1 (MQ=60)

                                                                                                                             AGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAC                        <  SRR19973061.1789862/150‑1 (MQ=60)

                                                                                                                             AGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAC                        <  SRR19973061.3690163/150‑1 (MQ=60)

                                                                                                                             AGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAC                        <  SRR19973061.2583367/150‑1 (MQ=60)

                                                                                                                             AGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAC                        >  SRR19973061.481770/1‑150 (MQ=60)

                                                                                                                                   CTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGA                  >  SRR19973061.3342067/1‑150 (MQ=60)

                                                                                                                                   CTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGA                  >  SRR19973061.3342056/1‑150 (MQ=60)

                                                                                                                                    TAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAA                 >  SRR19973061.2317342/1‑150 (MQ=60)

                                                                                                                                      ATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACA               <  SRR19973061.3417975/150‑1 (MQ=60)

                                                                                                                                       TTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAT              >  SRR19973061.3468041/1‑150 (MQ=60)

                                                                                                                                        TGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATC             <  SRR19973061.887767/150‑1 (MQ=60)

                                                                                                                                         GCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCT            <  SRR19973061.464221/150‑1 (MQ=60)

                                                                                                                                          CTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTCGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTC           >  SRR19973061.2731118/1‑150 (MQ=60)

                                                                                                                                          CTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTC           >  SRR19973061.2495697/1‑150 (MQ=60)

                                                                                                                                           TCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCC          >  SRR19973061.2333099/1‑150 (MQ=60)

                                                                                                                                           TCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCC          <  SRR19973061.1857420/150‑1 (MQ=60)

                                                                                                                                           TCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCC          <  SRR19973061.3705977/150‑1 (MQ=60)

                                                                                                                                              GCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGG       <  SRR19973061.1132865/150‑1 (MQ=60)

                                                                                                                                                CACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCG     <  SRR19973061.1993221/150‑1 (MQ=60)

                                                                                                                                                   TTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACG  <  SRR19973061.3576410/150‑1 (MQ=60)

                                                                                                                                                   TTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACG  >  SRR19973061.399031/1‑150 (MQ=60)

                                                                                                                                                   TTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACG  <  SRR19973061.3152600/150‑1 (MQ=60)

CTCTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACG  >  CP009273/1720031‑1720327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`