Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,476,524 T→A 100% N99Y (AAT→TAT)  emrK ← EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,476,5240TA97.4% 601.3 / 2.6 192N99Y (AAT→TAT) emrKEmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component
Reads supporting (aligned to +/- strand):  ref base T (2/5);  new base A (98/87);  total (100/92)
Fisher's exact test for biased strand distribution p-value = 2.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 200 total aligned reads displayed.

AACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGT  >  CP009273/2476378‑2476668
                                                                                                                                                  |                                                                                                                                                
aaCCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTAttt                                                                                                                                                 >  2:1360738/1‑148 (MQ=255)
 aCCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTAtatt                                                                                                                                                >  1:1261579/1‑148 (MQ=255)
  cccccTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTAtattt                                                                                                                                               <  2:1247036/148‑1 (MQ=255)
     ccTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCGAGAGTATAGTTAGc                                                                                                                                            >  1:2102449/1‑148 (MQ=255)
     ccTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGc                                                                                                                                            >  2:433218/1‑148 (MQ=255)
        gCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCttt                                                                                                                                         <  1:1234868/148‑1 (MQ=255)
        gCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCttt                                                                                                                                         <  2:329654/148‑1 (MQ=255)
        gCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCttt                                                                                                                                         <  1:2984150/148‑1 (MQ=255)
        gCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCttt                                                                                                                                         <  1:2616699/148‑1 (MQ=255)
         cTTCTCTAACGGGACTCGAAGGTTATAATCTTCTAAAGATTGTTGATCCTGAATAAGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTa                                                                                                                                        <  1:663558/148‑1 (MQ=255)
          ttCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTAt                                                                                                                                       <  2:1048304/148‑1 (MQ=255)
              cTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAg                                                                                                                                   >  1:85390/1‑148 (MQ=255)
              cTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAg                                                                                                                                   <  1:3053829/148‑1 (MQ=255)
               tAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCCGATTATATTTAGCTTTATTGAGt                                                                                                                                  >  2:1193192/1‑148 (MQ=255)
               tAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGt                                                                                                                                  >  2:17/1‑148 (MQ=255)
                  cGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCg                                                                                                                               <  1:1371910/148‑1 (MQ=255)
                   ggCACTCGACGGTTATAATCTTCTACAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGa                                                                                                                              <  2:1330206/148‑1 (MQ=255)
                   ggCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGa                                                                                                                              <  1:1005827/148‑1 (MQ=255)
                   ggCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGa                                                                                                                              <  2:719585/148‑1 (MQ=255)
                    gCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGAt                                                                                                                             <  1:3144401/148‑1 (MQ=255)
                     cACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTAGTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATa                                                                                                                            >  1:1877909/1‑148 (MQ=255)
                       cTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGt                                                                                                                          >  1:1332407/1‑148 (MQ=255)
                         cGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTgg                                                                                                                        >  1:2279350/1‑148 (MQ=255)
                         cGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTgg                                                                                                                        >  2:349815/1‑148 (MQ=255)
                         cGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTgg                                                                                                                        >  1:813825/1‑148 (MQ=255)
                          gACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGc                                                                                                                       <  1:3509052/148‑1 (MQ=255)
                            cGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCAt                                                                                                                     >  2:2016821/1‑148 (MQ=255)
                                 ataATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGtt                                                                                                                >  2:3418429/1‑148 (MQ=255)
                                  taATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGttt                                                                                                               >  2:1208701/1‑148 (MQ=255)
                                    aTCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTa                                                                                                             >  1:2555253/1‑148 (MQ=255)
                                       ttctAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATcc                                                                                                          <  2:2775684/148‑1 (MQ=255)
                                        tctAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCa                                                                                                         <  1:3095267/148‑1 (MQ=255)
                                          tAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGt                                                                                                       >  1:674888/1‑148 (MQ=255)
                                           aaaGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTg                                                                                                      >  2:477772/1‑148 (MQ=255)
                                             aGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGaa                                                                                                    <  2:188178/148‑1 (MQ=255)
                                              gATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCTTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGaaa                                                                                                   >  1:745314/1‑148 (MQ=255)
                                               aTTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAAc                                                                                                  >  2:1851486/1‑148 (MQ=255)
                                                 tgttgATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTa                                                                                                <  2:3059944/148‑1 (MQ=255)
                                                 tgttgATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTa                                                                                                <  2:2037711/148‑1 (MQ=255)
                                                  gttgATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTaa                                                                                               <  2:1973070/148‑1 (MQ=255)
                                                   ttgATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTaaa                                                                                              >  2:1575227/1‑148 (MQ=255)
                                                    tgATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTaaaa                                                                                             <  2:2713321/148‑1 (MQ=255)
                                                     gATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAAt                                                                                            >  1:166920/1‑148 (MQ=255)
                                                       tACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGt                                                                                          >  1:1962082/1‑148 (MQ=255)
                                                       tACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGt                                                                                          <  1:1852268/148‑1 (MQ=255)
                                                        aCTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTc                                                                                         <  1:2842363/148‑1 (MQ=255)
                                                         cTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCa                                                                                        <  2:1964386/148‑1 (MQ=255)
                                                          tGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAc                                                                                       >  1:2125090/1‑148 (MQ=255)
                                                           gAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAcc                                                                                      >  1:1842925/1‑148 (MQ=255)
                                                           gAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAcc                                                                                      >  1:978130/1‑148 (MQ=255)
                                                           gAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAcc                                                                                      <  1:1744798/148‑1 (MQ=255)
                                                            aaTACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCt                                                                                     <  1:2931906/148‑1 (MQ=255)
                                                              tACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTg                                                                                   <  1:50774/148‑1 (MQ=255)
                                                               aCGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGt                                                                                  <  1:389913/148‑1 (MQ=255)
                                                                 gTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCg                                                                                >  1:745705/1‑148 (MQ=255)
                                                                 gTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCg                                                                                >  1:2506706/1‑148 (MQ=255)
                                                                 gTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCg                                                                                >  1:2506593/1‑148 (MQ=255)
                                                                  tGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGa                                                                               >  1:3187632/1‑148 (MQ=255)
                                                                  tGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGa                                                                               >  1:1185864/1‑148 (MQ=255)
                                                                   gCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGaa                                                                              <  1:712660/148‑1 (MQ=255)
                                                                       aaGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTa                                                                          >  2:1102767/1‑148 (MQ=255)
                                                                        aGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAg                                                                         >  2:1895668/1‑148 (MQ=255)
                                                                        aGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAg                                                                         >  2:613235/1‑148 (MQ=255)
                                                                         gCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGt                                                                        <  2:2033866/148‑1 (MQ=255)
                                                                          cGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGtt                                                                       <  2:1079651/148‑1 (MQ=255)
                                                                           gACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTGTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTc                                                                      <  2:1674259/148‑1 (MQ=255)
                                                                             cTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGt                                                                    <  1:687242/148‑1 (MQ=255)
                                                                               tCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTAt                                                                  <  1:2371559/148‑1 (MQ=255)
                                                                                cGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATc                                                                 <  1:624121/148‑1 (MQ=255)
                                                                                   cACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCttt                                                              >  1:3383911/1‑148 (MQ=255)
                                                                                   cACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCttt                                                              >  2:3187067/1‑148 (MQ=255)
                                                                                     cTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTAt                                                            >  2:2461154/1‑148 (MQ=255)
                                                                                          ttGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTa                                                       <  2:977136/148‑1 (MQ=255)
                                                                                              ttATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGa                                                   <  1:3418429/148‑1 (MQ=255)
                                                                                                    tGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGa                                             >  2:3114790/1‑148 (MQ=255)
                                                                                                     gTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGac                                            >  1:1512791/1‑148 (MQ=255)
                                                                                                       atgTATAGTTTATTCGTTTGCCGAACACTATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGacac                                          <  2:1419171/146‑1 (MQ=255)
                                                                                                       aaGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGacac                                          >  2:909738/1‑148 (MQ=255)
                                                                                                         gTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTa                                        >  2:1746211/1‑148 (MQ=255)
                                                                                                          tataGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTAc                                       >  2:1036384/1‑148 (MQ=255)
                                                                                                            taGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTCAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCt                                     <  2:3237377/148‑1 (MQ=255)
                                                                                                             aGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTg                                    <  2:1261579/148‑1 (MQ=255)
                                                                                                             aGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATATTTATGATTAACGACAGTGACACTACCTg                                    <  1:226404/148‑1 (MQ=255)
                                                                                                               tttATTCGTGTGCCGAAAAATATTGGCCATATTATATTTAGCTTTATTGAGTGCGATAGTGCCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACTTAGTTCTTATCTTTATGATTAACGACAGTGACACTACCTgag                                  <  1:332059/148‑1 (MQ=255)
                                                                                                                ttATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTgaga                                 >  1:2684091/1‑148 (MQ=255)
                                                                                                                 tATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGATTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTCAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGAc                                <  1:694405/148‑1 (MQ=255)
                                                                                                                  aTTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACt                               >  2:2223943/1‑148 (MQ=255)
                                                                                                                   ttCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACtt                              >  1:3443269/1‑148 (MQ=255)
                                                                                                                    tCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTtg                             >  1:2897324/1‑148 (MQ=255)
                                                                                                                      gTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTtgtg                           <  1:2629387/148‑1 (MQ=255)
                                                                                                                      gTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTtgtg                           <  2:268845/148‑1 (MQ=255)
                                                                                                                          gCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGa                       >  2:2918339/1‑148 (MQ=255)
                                                                                                                          gCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGa                       <  2:566167/148‑1 (MQ=255)
                                                                                                                          gCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGa                       >  1:103060/1‑148 (MQ=255)
                                                                                                                           ccGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGaa                      <  2:2379608/148‑1 (MQ=255)
                                                                                                                               aCAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTg                  >  1:661610/1‑148 (MQ=255)
                                                                                                                                  atatTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGAt               <  2:83103/148‑1 (MQ=255)
                                                                                                                                      ttGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACCCTACCTGAGACTTGTGCAGAAATTGGATCTGc           >  2:1259135/1‑148 (MQ=255)
                                                                                                                                       tGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCa          <  1:1102767/148‑1 (MQ=255)
                                                                                                                                               tataTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGt  >  1:3076829/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
AACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGT  >  CP009273/2476378‑2476668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACAT  >  CP009273/2476375‑2476673
                                                                                                                                                     |                                                                                                                                                     
AATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGTTTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATA                                                                                                                                                       <  SRR19973065.477699/150‑1 (MQ=60)
AATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATA                                                                                                                                                       >  SRR19973065.2046911/1‑150 (MQ=60)
AATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATA                                                                                                                                                       >  SRR19973065.2184020/1‑150 (MQ=60)
  TAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATT                                                                                                                                                     <  SRR19973065.224353/150‑1 (MQ=60)
  TAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATT                                                                                                                                                     >  SRR19973065.1269892/1‑150 (MQ=60)
  TAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATT                                                                                                                                                     >  SRR19973065.1269683/1‑150 (MQ=60)
   AACCCCCTGCTTCGCTAACGGCACTCGACTGTTATAATCTTCTAAATATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTT                                                                                                                                                    <  SRR19973065.2040889/150‑1 (MQ=60)
     CCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAG                                                                                                                                                  <  SRR19973065.3062325/150‑1 (MQ=60)
       CCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCT                                                                                                                                                <  SRR19973065.1690024/150‑1 (MQ=60)
        CCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTT                                                                                                                                               <  SRR19973065.3461123/150‑1 (MQ=60)
           GCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTAT                                                                                                                                            <  SRR19973065.2632910/150‑1 (MQ=60)
           GCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTAT                                                                                                                                            <  SRR19973065.1242957/150‑1 (MQ=60)
           GCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTAT                                                                                                                                            <  SRR19973065.3002420/150‑1 (MQ=60)
            CTTCTCTAACGGGACTCGAAGGTTATAATCTTCTAAAGATTGTTGATCCTGAATAAGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATT                                                                                                                                           <  SRR19973065.667960/150‑1 (MQ=60)
            CTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATT                                                                                                                                           <  SRR19973065.667964/150‑1 (MQ=60)
            CTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATT                                                                                                                                           <  SRR19973065.179402/150‑1 (MQ=60)
            CTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATT                                                                                                                                           <  SRR19973065.667864/150‑1 (MQ=60)
             TTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTG                                                                                                                                          <  SRR19973065.1669932/150‑1 (MQ=60)
             GTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTG                                                                                                                                          <  SRR19973065.3418804/150‑1 (MQ=60)
              TCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGA                                                                                                                                         <  SRR19973065.2125440/150‑1 (MQ=60)
               CGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAG                                                                                                                                        >  SRR19973065.86221/1‑150 (MQ=60)
                 CTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTG                                                                                                                                      <  SRR19973065.3072501/150‑1 (MQ=60)
                     CGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGAT                                                                                                                                  <  SRR19973065.1380966/150‑1 (MQ=60)
                      GGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATA                                                                                                                                 <  SRR19973065.1012505/150‑1 (MQ=60)
                      GGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTAGTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATA                                                                                                                                 >  SRR19973065.1890273/1‑150 (MQ=60)
                       GCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAG                                                                                                                                <  SRR19973065.3163501/150‑1 (MQ=60)
                        CACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGT                                                                                                                               >  SRR19973065.1341814/1‑150 (MQ=60)
                        CACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGT                                                                                                                               >  SRR19973065.1341221/1‑150 (MQ=60)
                          CTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGG                                                                                                                             >  SRR19973065.819191/1‑150 (MQ=60)
                          CTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGG                                                                                                                             >  SRR19973065.2293728/1‑150 (MQ=60)
                             GACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCAT                                                                                                                          <  SRR19973065.3530344/150‑1 (MQ=60)
                                GGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAG                                                                                                                       <  SRR19973065.3334001/150‑1 (MQ=60)
                                    ATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTT                                                                                                                   <  SRR19973065.188446/150‑1 (MQ=60)
                                     TAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTA                                                                                                                  >  SRR19973065.2571240/1‑150 (MQ=60)
                                     TAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTA                                                                                                                  >  SRR19973065.801991/1‑150 (MQ=60)
                                           TCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGT                                                                                                            <  SRR19973065.3114168/150‑1 (MQ=60)
                                           TCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGT                                                                                                            >  SRR19973065.679388/1‑150 (MQ=60)
                                              AAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAA                                                                                                         >  SRR19973065.1032574/1‑150 (MQ=60)
                                               AAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCTTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAA                                                                                                        >  SRR19973065.750302/1‑150 (MQ=60)
                                               AAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTACATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAA                                                                                                        >  SRR19973065.750304/1‑150 (MQ=60)
                                                      TTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAAT                                                                                                 >  SRR19973065.1953817/1‑150 (MQ=60)
                                                      TTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAAT                                                                                                 >  SRR19973065.168280/1‑150 (MQ=60)
                                                        GATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGT                                                                                               >  SRR19973065.1974895/1‑150 (MQ=60)
                                                        GATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGT                                                                                               >  SRR19973065.639302/1‑150 (MQ=60)
                                                          TACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCA                                                                                             <  SRR19973065.1864469/150‑1 (MQ=60)
                                                          TACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCA                                                                                             >  SRR19973065.2285445/1‑150 (MQ=60)
                                                           ACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAC                                                                                            >  SRR19973065.3140009/1‑150 (MQ=60)
                                                           ACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAC                                                                                            >  SRR19973065.2138770/1‑150 (MQ=60)
                                                           ACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCAC                                                                                            <  SRR19973065.2859862/150‑1 (MQ=60)
                                                            CTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACC                                                                                           >  SRR19973065.984622/1‑150 (MQ=60)
                                                            CTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACC                                                                                           >  SRR19973065.1855081/1‑150 (MQ=60)
                                                             TGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCT                                                                                          >  SRR19973065.2880816/1‑150 (MQ=60)
                                                              GAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTT                                                                                         <  SRR19973065.841247/150‑1 (MQ=60)
                                                              GAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTT                                                                                         <  SRR19973065.1756306/150‑1 (MQ=60)
                                                               AATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTG                                                                                        <  SRR19973065.2949695/150‑1 (MQ=60)
                                                                 TACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTC                                                                                      <  SRR19973065.51341/150‑1 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     <  SRR19973065.392636/150‑1 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     >  SRR19973065.2522361/1‑150 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     >  SRR19973065.2522343/1‑150 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     >  SRR19973065.750696/1‑150 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     <  SRR19973065.3387417/150‑1 (MQ=60)
                                                                  ACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCG                                                                                     >  SRR19973065.2522457/1‑150 (MQ=60)
                                                                   CGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGA                                                                                    >  SRR19973065.3206869/1‑150 (MQ=60)
                                                                   CGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGA                                                                                    >  SRR19973065.1193365/1‑150 (MQ=60)
                                                                      GCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACG                                                                                 <  SRR19973065.717428/150‑1 (MQ=60)
                                                                      GCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACG                                                                                 <  SRR19973065.2942648/150‑1 (MQ=60)
                                                                          AAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGT                                                                             >  SRR19973065.724061/1‑150 (MQ=60)
                                                                              GACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGT                                                                         >  SRR19973065.254716/1‑150 (MQ=60)
                                                                              GACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGT                                                                         >  SRR19973065.1324987/1‑150 (MQ=60)
                                                                                CTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTAT                                                                       <  SRR19973065.691814/150‑1 (MQ=60)
                                                                                  TCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCT                                                                     <  SRR19973065.2386353/150‑1 (MQ=60)
                                                                                   CGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTT                                                                    <  SRR19973065.628161/150‑1 (MQ=60)
                                                                                    GGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTT                                                                   >  SRR19973065.3404603/1‑150 (MQ=60)
                                                                                    GGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTT                                                                   <  SRR19973065.2679852/150‑1 (MQ=60)
                                                                                                 TTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACA                                                      <  SRR19973065.3439314/150‑1 (MQ=60)
                                                                                                 TTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACA                                                      <  SRR19973065.1863684/150‑1 (MQ=60)
                                                                                                      CTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC                                                 >  SRR19973065.1522661/1‑150 (MQ=60)
                                                                                                      CTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGAC                                                 >  SRR19973065.3073118/1‑150 (MQ=60)
                                                                                                           AGTATTGTTTTTTGGTTTGCCGAACAATTTTTGCCATATTATTTTTAGCTTTATTGAGTGGTATTGTGGCATAAGTTTTATCCAGTTAAACTAAAATGTCACCTTGTCGAAGTTAGTTCTTATCTTTATGATTAACGACAGTGACACTAC                                            <  SRR19973065.1213653/150‑1 (MQ=60)
                                                                                                           AGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTAC                                            >  SRR19973065.2420814/1‑150 (MQ=60)
                                                                                                           AGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTAC                                            >  SRR19973065.1056017/1‑150 (MQ=60)
                                                                                                              ATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTTTTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTG                                         <  SRR19973065.2820635/150‑1 (MQ=60)
                                                                                                                ATTTTATTCTTTTGCCGAAAAATATTTGCCTTATTATATTTTGCTTTTTTGAGTGCGATTGTGGAATCATTTTTATCCAGTTAAAATAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTTTGATTAACGACAGTGACACTACCTGAG                                       <  SRR19973065.356478/150‑1 (MQ=60)
                                                                                                                AGTTTATTCGTTTGCCGAACAATATTTGCCATATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAG                                       <  SRR19973065.2012997/150‑1 (MQ=60)
                                                                                                                AGTTTATTCGTTTGCCGAACAATATTTGCCATATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATATTTATGATTAACGACAGTGACACTACCTGAG                                       <  SRR19973065.228066/150‑1 (MQ=60)
                                                                                                                 GTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGA                                      >  SRR19973065.2700735/1‑150 (MQ=60)
                                                                                                                 GTTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGA                                      >  SRR19973065.2384094/1‑150 (MQ=60)
                                                                                                                  TTTATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGAC                                     >  SRR19973065.545956/1‑150 (MQ=60)
                                                                                                                  TTTATTCGTGTGCCGAAAAATATTGGCCATATTATATTTAGCTTTATTGAGTGCGATAGTGCCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACTTAGTTCTTATCTTTATGATTAACGACAGTGACACTACCTGAGAC                                     <  SRR19973065.334382/150‑1 (MQ=60)
                                                                                                                    TATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTT                                   >  SRR19973065.3465254/1‑150 (MQ=60)
                                                                                                                    TATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTT                                   >  SRR19973065.3464266/1‑150 (MQ=60)
                                                                                                                    TATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACATTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTT                                   <  SRR19973065.699043/150‑1 (MQ=60)
                                                                                                                    TATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGATTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTCAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTT                                   <  SRR19973065.699029/150‑1 (MQ=60)
                                                                                                                    TATTCGTTTGCCGAAAAATATTTGCCATATTATTTTTAGATTTTTTGAGTGCGATAGTGGCATCATTTTTATCCAGTGAAACTAAAATGTCACCTTGTCTAACGTAGTTCTTATCTTTATGATTAACGACAGTGACACTACCTGAGACTT                                   <  SRR19973065.698682/150‑1 (MQ=60)
                                                                                                                     ATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTG                                  >  SRR19973065.2915010/1‑150 (MQ=60)
                                                                                                                     ATTCGTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTG                                  >  SRR19973065.2583596/1‑150 (MQ=60)
                                                                                                                         GTTTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCA                              <  SRR19973065.2645648/150‑1 (MQ=60)
                                                                                                                           TTGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGA                            >  SRR19973065.104011/1‑150 (MQ=60)
                                                                                                                            TGCCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCTTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAA                           >  SRR19973065.3048732/1‑150 (MQ=60)
                                                                                                                              CCGAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAAT                         >  SRR19973065.2159392/1‑150 (MQ=60)
                                                                                                                                GAACAATATTTGCCATATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTTTGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTG                       <  SRR19973065.685228/150‑1 (MQ=60)
                                                                                                                                GAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTG                       >  SRR19973065.665990/1‑150 (MQ=60)
                                                                                                                                GAACAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTG                       <  SRR19973065.2633950/150‑1 (MQ=60)
                                                                                                                                 AACAATTTTTCCCATATTATTTTTAGCTTTATTGAGTGCTATAGTGGCATCAGTTTTATCCAGTCAAAATAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGG                      <  SRR19973065.913052/150‑1 (MQ=60)
                                                                                                                                   CAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGAT                    >  SRR19973065.1415521/1‑150 (MQ=60)
                                                                                                                                   CAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGAT                    >  SRR19973065.3171898/1‑150 (MQ=60)
                                                                                                                                   CAATATTTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGAT                    >  SRR19973065.3102156/1‑150 (MQ=60)
                                                                                                                                         TTGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCAT              <  SRR19973065.117908/150‑1 (MQ=60)
                                                                                                                                          TGCCAGATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATT             <  SRR19973065.1110009/150‑1 (MQ=60)
                                                                                                                                               GATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACATTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCG        >  SRR19973065.484247/1‑150 (MQ=60)
                                                                                                                                                ATTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGT       >  SRR19973065.3095623/1‑150 (MQ=60)
                                                                                                                                                 TTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTG      >  SRR19973065.1497609/1‑150 (MQ=60)
                                                                                                                                                 TTATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTG      >  SRR19973065.1497540/1‑150 (MQ=60)
                                                                                                                                                  TATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGA     >  SRR19973065.2828855/1‑150 (MQ=60)
                                                                                                                                                   ATATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGAC    >  SRR19973065.2806219/1‑150 (MQ=60)
                                                                                                                                                    TATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACA   <  SRR19973065.1104981/150‑1 (MQ=60)
                                                                                                                                                     ATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACAT  >  SRR19973065.1862662/1‑150 (MQ=60)
                                                                                                                                                     ATTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACAT  >  SRR19973065.1862672/1‑150 (MQ=60)
                                                                                                                                                     |                                                                                                                                                     
AATAACCCCCTGCTTCGCTAACGGCACTCGACGGTTATAATCTTCTAAAGATTGTTGATACTGAATACGTGCTGAAGCGACTTCGGCACTGTATTGTTTATCCTGTAAGTATAGTTTATTCGTTTGCCGAACAATATTTGCCAGATTATTTTTAGCTTTATTGAGTGCGATAGTGGCATCAGTTTTATCCAGTGAAACTAAAATGTCACCTTGTCGAACGTAGTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACAT  >  CP009273/2476375‑2476673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: