Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F218 I0 R1
|
1506 |
278.7 |
9275112 |
94.5% |
8764980 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,046,473 |
G→T |
46.2% |
N135K (AAC→AAA) |
ubiH ← |
2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,046,473 | 0 | G | T | 46.2%
| 226.1
/ inf
| 294 | N135K (AAC→AAA) | ubiH | 2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base G (73/85); new base T (53/83); total (126/168) |
| Fisher's exact test for biased strand distribution p-value = 2.38e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 299 total aligned reads displayed.
CAGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGACAAATCCAGCGTG > CP009273/3046326‑3046622
|
cAGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACttt > 1:4099995/1‑150 (MQ=255)
cAGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGtt > 2:3606103/1‑150 (MQ=255)
cAGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGtt > 2:3606164/1‑150 (MQ=255)
aGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTa < 2:4358206/150‑1 (MQ=255)
aGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTa < 2:1741466/150‑1 (MQ=255)
aGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTa > 2:3009999/1‑150 (MQ=255)
tgttCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCCGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGcc > 1:2408092/1‑150 (MQ=255)
tgttCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGcc > 1:1064639/1‑150 (MQ=255)
ttCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCAc > 2:2120076/1‑150 (MQ=255)
gTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCAcgcg > 1:2293110/1‑150 (MQ=255)
aaGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGAt > 1:4623736/1‑150 (MQ=255)
aGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATc < 1:520112/150‑1 (MQ=255)
gCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAg < 1:1671333/150‑1 (MQ=255)
cTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAgg > 1:1659673/1‑150 (MQ=255)
cTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAgg > 1:2816729/1‑150 (MQ=255)
tCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAggg < 1:2002716/150‑1 (MQ=255)
ccTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGc < 1:588739/150‑1 (MQ=255)
tgctgcCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCaa < 1:1236005/150‑1 (MQ=255)
gcCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCa > 1:842546/1‑150 (MQ=255)
gcCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCa < 1:1568502/150‑1 (MQ=255)
cAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGc < 2:3368810/150‑1 (MQ=255)
aGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCg < 1:2017862/150‑1 (MQ=255)
tCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGtt < 2:3487820/150‑1 (MQ=255)
tCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGtt < 1:2872884/150‑1 (MQ=255)
tCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGtt < 2:402063/150‑1 (MQ=255)
aaCGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGTAGCGTTAc > 1:4195988/1‑150 (MQ=255)
aaCGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTAc < 2:1064221/150‑1 (MQ=255)
aCGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACg < 2:2719451/150‑1 (MQ=255)
gccgcACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGcc > 1:892711/1‑150 (MQ=255)
gccgcACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGcc > 1:1428132/1‑150 (MQ=255)
gcACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAgg > 1:3122320/1‑150 (MQ=255)
gcACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAgg < 1:4236743/150‑1 (MQ=255)
cACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGt > 2:237638/1‑150 (MQ=255)
cACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGGTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGt > 2:3761730/1‑150 (MQ=255)
aCGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTg > 1:2361691/1‑150 (MQ=255)
cgGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCtt < 2:2508133/150‑1 (MQ=255)
tGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTAc < 1:781695/150‑1 (MQ=255)
tGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTAc < 1:2994896/150‑1 (MQ=255)
ggCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACg < 2:226969/150‑1 (MQ=255)
tAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACgcag < 2:355588/150‑1 (MQ=255)
tAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACgcag < 2:160484/150‑1 (MQ=255)
tGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGc < 1:2724993/150‑1 (MQ=255)
ggTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAg < 2:186669/150‑1 (MQ=255)
tGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGcc < 1:1390076/150‑1 (MQ=255)
gCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCg < 2:4299481/150‑1 (MQ=255)
aTCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTg < 1:4569185/150‑1 (MQ=255)
aTCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTg > 2:2282891/1‑150 (MQ=255)
aTCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGACACTACAACGTGACACTGAGGACGGGCAACGTAAGCCACGCGATCAGGGCAATGCAGCGTTACGCAAGGTGCTTTACGCAGCAATGCAAACAGCCGTTg > 1:3323024/1‑150 (MQ=255)
tCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGc < 2:539142/150‑1 (MQ=255)
tgctACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGAc > 2:3105093/1‑150 (MQ=255)
gctACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACa < 2:470236/150‑1 (MQ=255)
ctACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTTCGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACAt < 1:260107/150‑1 (MQ=255)
ctACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACAt < 1:696759/150‑1 (MQ=255)
cAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATtgtg > 1:4394633/1‑150 (MQ=255)
ctcgcgGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGACGTTGCCCGACATGGTGCaa < 2:3857846/148‑1 (MQ=255)
cACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCaa > 1:1010370/1‑150 (MQ=255)
cgcgGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAAtt < 2:493392/150‑1 (MQ=255)
gcgGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTc < 2:4485326/150‑1 (MQ=255)
gCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGAc < 1:1162178/150‑1 (MQ=255)
ccGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACaa < 2:3286944/150‑1 (MQ=255)
cGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAAc > 2:985016/1‑150 (MQ=255)
cGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAAc < 1:3264248/150‑1 (MQ=255)
cGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAAc > 1:1898982/1‑150 (MQ=255)
gTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAAcc > 2:2595897/1‑150 (MQ=255)
cAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTg > 1:3285394/1‑150 (MQ=255)
cAGCGTCTCGCCACTATCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTg > 2:1759768/1‑150 (MQ=255)
aGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGt < 1:1706299/150‑1 (MQ=255)
aGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGt < 1:64076/150‑1 (MQ=255)
gTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTccc > 1:3912008/1‑150 (MQ=255)
tctcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCa < 2:4504853/150‑1 (MQ=255)
tctcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCa > 2:1488715/1‑150 (MQ=255)
ctcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAg < 2:1228156/150‑1 (MQ=255)
ctcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAg > 2:2650411/1‑150 (MQ=255)
ctcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAg > 2:803839/1‑150 (MQ=255)
tcGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAgc > 1:964964/1‑150 (MQ=255)
cGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAgcg < 2:3091142/150‑1 (MQ=255)
tctcCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCa < 2:1385014/150‑1 (MQ=255)
cAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTg < 2:3259167/150‑1 (MQ=255)
cAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTg < 1:48125/150‑1 (MQ=255)
cAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTg < 2:502832/150‑1 (MQ=255)
cGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACTCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTa > 1:1966416/1‑150 (MQ=255)
cGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTa > 1:4290717/1‑150 (MQ=255)
tCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAAt > 2:3511851/1‑150 (MQ=255)
tCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAAt > 2:3923839/1‑150 (MQ=255)
cACTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAAtc > 1:3176624/1‑150 (MQ=255)
aCTTCAACGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAAtct < 2:2785235/150‑1 (MQ=255)
cAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTg < 1:2466317/150‑1 (MQ=255)
ccGTGACTCTGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACAGTGTGCAAGTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTgcg < 2:2408092/149‑1 (MQ=255)
gTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTgcggc < 2:2912946/150‑1 (MQ=255)
gACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGa < 2:623458/150‑1 (MQ=255)
ctctGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAgg < 2:1118201/150‑1 (MQ=255)
ctGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGt > 2:2415127/1‑150 (MQ=255)
tGAGTACGGGCAACTTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTg < 2:221255/150‑1 (MQ=255)
aGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGAc > 1:3793573/1‑150 (MQ=255)
aGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGAc < 1:2094215/150‑1 (MQ=255)
aGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGAc > 1:105046/1‑150 (MQ=255)
aCGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGACaaa < 2:701692/150‑1 (MQ=255)
ggCAACTTTAGCCACGCGTTCAGGGCAATGCAGCGTTACGCCAGGTGCTATACGCAGCAATGCAAACAGCCGTTGACCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGAGGCGAGGGTGACAAAtac > 2:1238597/1‑148 (MQ=255)
ggCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGACAAATcc < 2:1706286/150‑1 (MQ=255)
gTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGACAAATCCAGCGTg > 1:3029791/1‑150 (MQ=255)
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CAGTTGTTCGTAAGGCTCCTGCTGCCAGTCAACGCCGCACGCGGTGGCTAACGCTGAATGGGTGCCATCAGCTGCTACCAGCACGCGGCCCGTCAGCGTCTCGCCACTCTCCAGCGTCACTTCAACGTGACTCTGAGTACGGGCAACGTTAGCCACGCGATCAGGGCAATGCAGCGTTACGCCAGGTGCTTTACGCAGCAATGCAAACAGCCGTTGCCCGACATTGTGCAATTCGACAACCTGTCCCAGCGCCGCCAGTTGGTAATCTTCTGCGGCGAGGGTGACAAATCCAGCGTG > CP009273/3046326‑3046622
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
