Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F9 I0 R1 131 136.1 2723430 98.1% 2671684 229.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,708,709 T→C 10.3% R597R (CGT→CGC)  rsxC → SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,7090TC10.3% 232.0 / 3.4 106R597R (CGT→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base T (47/35);  new base C (10/3);  total (64/42)
Fisher's exact test for biased strand distribution p-value = 2.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

GTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAG  >  NC_000913/1708483‑1708947
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               
gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACCGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGATATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                     >  1:1341300/1‑239 (MQ=255)
gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGCTCCGCGCAAAGCAGCCGCCGAAGCCGCTATTGCCCGGGCCAAAgcccg                                                                                                                                                                                                                                      >  2:863998/1‑238 (MQ=255)
gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                     >  1:1171526/1‑239 (MQ=255)
 tGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCa                                                                                                                                                                                                                                    >  1:1042713/1‑239 (MQ=255)
  gCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                      <  1:125744/236‑1 (MQ=255)
  gCAATTATTGCAGCAAGGGAAGCCCGTAAAGCGCAAGCAAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                      <  1:1302752/236‑1 (MQ=255)
  gCAATTATGGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACAGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                      <  2:526389/236‑1 (MQ=255)
   cAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCaa                                                                                                                                                                                                                                   >  1:245222/1‑238 (MQ=255)
    aaTTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAg                                                                                                                                                                                                                                  >  2:82266/1‑238 (MQ=255)
        attGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGa                                                                                                                                                                                                                             >  1:1225708/1‑239 (MQ=255)
        attGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGa                                                                                                                                                                                                                             >  2:1285748/1‑239 (MQ=255)
           gcagccCGGGAAGCCGGTAAAGCGCAAGCCAGAGCGAAGCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGaa                                                                                                                                                                                                                            <  2:1192631/237‑1 (MQ=255)
           gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGGGCCAACGCGCGCACGCAGGacc                                                                                                                                                                                                                           >  2:398885/1‑236 (MQ=255)
                acagaaaGCCGGTAAAGCGAAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACAAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                      <  2:484977/233‑1 (MQ=255)
                aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                      <  1:746053/238‑1 (MQ=255)
                aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                      <  1:226591/238‑1 (MQ=255)
                aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                      <  1:1322518/238‑1 (MQ=255)
                aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAAc                                                                                                                                                                                                                     >  2:359257/1‑239 (MQ=255)
                 cGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACa                                                                                                                                                                                                                    <  1:1073588/239‑1 (MQ=255)
                 cGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAACCGCCGCCGAAGCCGCAATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACa                                                                                                                                                                                                                    >  2:69731/1‑239 (MQ=255)
                     aaGCCCGTAAAGCGCAAGCCGGCGCGAAGCGGGCAGAGCTGCAGCAAACTAACGCCGCAGCAACCGTTGCTAAGCCACGAAAAACTGCAGTGGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAGCAGGCTAATGCGGACCCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGc                                                                                                                                                                                                                 <  2:77735/238‑1 (MQ=18)
                     aaGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGc                                                                                                                                                                                                                 <  1:384824/238‑1 (MQ=255)
                           gTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGTGCCAACGCGCGCAAACTGGAACAGCAACAGGCTaaagag                                                                                                                                                                                                          >  2:260025/1‑235 (MQ=255)
                             aacgcgaaagaaagagCAAAACAGAACGAACAGAAGCAAACTAAAGACGCACAAACCCGTGCTGACCCACGAAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                        <  2:305049/227‑1 (MQ=17)
                              aaGCGCAAGCCAGAGCGAAACAGGCAGAACGGCAGCAAACTAACGACGCAGCAACCGTTGATGAACCACGTAAAACTGCCGTAGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                        <  1:437097/238‑1 (MQ=255)
                               aGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAc                                                                                                                                                                                                      <  1:1337101/239‑1 (MQ=255)
                                   cAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCGCGCCAGCTGGAACAGCAACAGGCTACTGCCGAGCCaga                                                                                                                                                                                                  >  2:287553/1‑239 (MQ=255)
                                   cAAACCAGATCGAAACAGGCAGAACTGCAGAAACCGAACGAAGCAGCAACCGTTGCTTACCCGCGAAAAACTGCCGTTTAAGCAGCTATCGGCCGCACCAAAGCGCGGAAGCTGGAGGAGCAACAGGCTAATGCGGAACCAGAACAAGAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                   <  2:1337701/238‑1 (MQ=18)
                                    aaGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaa                                                                                                                                                                                                 >  1:445210/1‑239 (MQ=255)
                                        cAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaaga                                                                                                                                                                                               <  1:948534/237‑1 (MQ=255)
                                        cAGAGCGAAACAGGCAGAACGGCAGCAACCGAAGGGCGCAGCAACCGGTGCTGACCCACGAAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAc                                                                                                                                                                                             <  2:382620/239‑1 (MQ=18)
                                           agCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCCACAGGCTAATGCGGACCAAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCCAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAg                                                                                                                                                                                           >  1:1099284/1‑238 (MQ=255)
                                            gCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAgg                                                                                                                                                                                          <  1:1246394/238‑1 (MQ=255)
                                                aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACCGGAACAGCAACAGGCTCATGCGGAGGCCGAAGACCAGATCgc                                                                                                                                                                                      >  2:13557/1‑237 (MQ=18)
                                                              cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgccg                                                                                                                                                                        >  2:1009401/1‑238 (MQ=255)
                                                              cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgccg                                                                                                                                                                        >  1:640536/1‑238 (MQ=255)
                                                               agcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATCCGCAGACAGACGAACAgccccctctgcgaaaagcagc                                                                                                                                                                       >  2:856185/1‑218 (MQ=18)
                                                                      tAACGCCGAAGAAACCGTGGCTGATCCTGCAAAAACGGCCGATGAAGCAGCTAGCGCCGGGCCAAAAGCGCGCAAGCAGGAACACCAACAGCCTAATGAGGAACCAGAACCACAGGCCGATCCACGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                              <  2:411275/239‑1 (MQ=14)
                                                                      aaacagcggccaaaCCGTAGAGGACCCACGCAAAACTGCCGTCGAAGACGCTCACGCCCGCGACAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAAGACCAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                              <  2:942367/227‑1 (MQ=11)
                                                                        cgcaccaagaaaCCATGGCTGAGCCACGCAAAACGGCCGTGAAAGCAGGTATTGCCCGCGACAAAGCGGGAAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGc                                                                                                                                                             <  2:445210/228‑1 (MQ=11)
                                                                        acgcggccgaaaccccggataacccACGAAAAACTGCCGTAGAGGAAGCCAGCACCGGCGCAAAAGGGCGCAAGCGGGAACAGCAGCAGCCAAATACGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                              <  2:179892/214‑1 (MQ=14)
                                                                            atcagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAAGTCGATCCCCGCAAAGCCGCCGCAGACGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCTGGACCAGCAACAGGCTAATGAGGAACAATAAGAACAGTTCGAGCCGAGCAAAgccccctcgacgacgcaca                                                                                                                                                         >  2:737188/3‑226 (MQ=17)
                                                                                gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGGGCAAAGCCGCCGTCGA‑AGcgcctcttg                                                                                                                                                     >  2:114907/1‑230 (MQ=255)
                                                                                gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAGAGCCGCCGTCGA‑CGCCGCTATTg                                                                                                                                                     >  1:948315/1‑238 (MQ=255)
                                                                                  aaCCGTTGTTAATCCACTTAAAACTGCCGTGGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc                                                                                                                                                    <  2:1230711/237‑1 (MQ=255)
                                                                                       ttGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTACTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAACGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTCCCCGTGc                                                                                                                                              >  2:514010/1‑238 (MQ=255)
                                                                                           tGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAg                                                                                                                                         <  1:1009401/239‑1 (MQ=255)
                                                                                             aTCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCTCGCAAAGCCGCCGTAGA‑AGCGGCTATTGCACGCGCCAAAGc                                                                                                                                        >  2:434187/1‑238 (MQ=17)
                                                                                               ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCAc                                                                                                                                      >  1:175598/1‑238 (MQ=255)
                                                                                               cagcGTAAAACTGCCGTAGAGGCAGCGATCGACGCCGCAAAAGCGCGCAAGCAGGAACAGCAACAGGCAAATGCGGAACCAGAACACCAGGCTGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACg                                                                                                                                     <  2:317099/236‑1 (MQ=14)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAGCCCGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGA‑CGCCGCTATTGCCCGTGcgacggccacgaa                                                                                                                                  >  2:275613/1‑227 (MQ=14)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCTTGCCAAAGCACGCaa                                                                                                                                  >  1:390349/1‑239 (MQ=255)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCa                                                                                                                                   >  1:486998/1‑238 (MQ=255)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTAGTCCCCGGGCCAAAGCCCGCaa                                                                                                                                  >  1:753870/1‑239 (MQ=255)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGAAAGCTGGCACAGCAACAGGCTAAAGCGGAGCCAGAAGAACAGGTCGACCCGGCCAAAGCCCCCG‑CGACAGCCGCCATTGcccagacccagcactcaaa                                                                                                                                  >  2:81694/1‑223 (MQ=14)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCACGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGCCGA‑AGCCGCTCTTGCCCGCGCCAAAACACGcca                                                                                                                                  >  2:154430/1‑237 (MQ=255)
                                                                                                  cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCaa                                                                                                                                  >  1:753016/1‑239 (MQ=255)
                                                                                                       aaCTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTCCCAAAGCACGCAAACTgg                                                                                                                             >  1:1136878/1‑239 (MQ=255)
                                                                                                         ctgctgcaggacaggcaaTCGCACGAGCAAAAGCGCGCAAACCGGAACAGCACCGGGCCAATACGGGGCCAGGAGAGCAGGTTTACCCGCTCAAAGCTGCCGTCGAAGCTGCTATTGCGCGAGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAGCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa                                                                                                                           <  2:940155/222‑1 (MQ=14)
                                                                                                         cTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa                                                                                                                           <  1:359257/239‑1 (MQ=255)
                                                                                                            ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCCGGCACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGGTCCGCGCAAAGCCGCCGTCGA‑CGCCGCCCTTGCCCCAGCCAAGGCCCGCAACCCGGcaca                                                                                                                         >  2:107715/1‑238 (MQ=11)
                                                                                                            ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCACAGCCCCCGACGA‑GCCCGCTACCACCAGTGCCAAAGCGTGAAAGCGGGACCa                                                                                                                         >  2:1127665/1‑238 (MQ=14)
                                                                                                             cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGAACGCAAGCCGGAACAGc                                                                                                                       >  1:919449/1‑239 (MQ=255)
                                                                                                             cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGTCGATACGCGCAAAGCCGACGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGc                                                                                                                       >  2:293912/1‑239 (MQ=255)
                                                                                                               tgaaagaagTTATCGCCAGCGCAAGACCGCCCAAGCGTGAACAGCACCAGGGTAATGCGGAACCAGAACAACAGATCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCaa                                                                                                                     <  2:919449/236‑1 (MQ=14)
                                                                                                                tGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                     <  1:686366/238‑1 (MQ=255)
                                                                                                                          aTCGCCCGCGCCAAAGCGCCCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                          <  1:72640/239‑1 (MQ=255)
                                                                                                                             accgcgacaaaaGCGGGCAAGCAGGAACAGCAAAAGGATAATGGAGACCCAGAACACCAGGCTGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATgtgga                                                                                                       <  2:1343126/230‑5 (MQ=11)
                                                                                                                                 gcgcCAAAGCGCGCAAGATGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                   <  1:1314181/239‑1 (MQ=255)
                                                                                                                                 gcgcCAAAACTCGGAAGCTGGAACAGCAACAGCCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                   <  1:287553/239‑1 (MQ=255)
                                                                                                                                  cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCCCGAAAGCCGGACCAGCAACAAGCCAATGCCggtccc                                                                                                   >  2:104674/1‑233 (MQ=14)
                                                                                                                                  cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCCGAGCCAg                                                                                                  >  1:504166/1‑239 (MQ=255)
                                                                                                                                                           cAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGCAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑CGCCGCCATTGCCCGCGCCAAAGCACGCAAGCTGGCACACAAACAGTCCAAAGCGGAGACATAACAACAgaccaagcagctcaaaa                                                                          >  2:811437/1‑222 (MQ=11)
                                                                                                                                                           cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGCACAGCAACAGGCTAATTCCGAGCCAGAAAAACAGGTCAATCCGCGCaaaa                                                                          >  1:521052/1‑237 (MQ=255)
                                                                                                                                                             aCAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAGCTCGCACAGCAACACGCTAATGCCGAACCAGAACAACAGGTCAAACCGCGCAAAGCCGCCGTCGC‑ATCTGCTATTGCCCGCGCCAACGCGCGCAAGGCGCAACAGCAAAACGCTACCGCCGCACACGAACAAGAGGTCGAACCGCCCAACgcg                                                                        >  2:659619/1‑237 (MQ=11)
                                                                                                                                                                    aagggggAACCAGAACAGCAGTTCGATCCGCCTAAAGCGGCCGTGGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa                                                                <  2:486998/234‑1 (MQ=14)
                                                                                                                                                                     aagaggAAACAGAAAAAAAGGACGACCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCGTGCCAAAGCCCGACCGCTGGCACCGACCCAGGCTCCTGCAGAACCAGCACAAAAGGCCGATCCGCGCAAAGCCGCAGTCGa                                                                >  1:738655/5‑238 (MQ=14)
                                                                                                                                                                     aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCTGCGGTAGA‑CGCCGCGATGGCCCGGGCCCAAGCCCGAAAGCCGGCACAGCAGACGGATGAAGCCGTGGCAGAAGAGCAGGTCGGGCCGCCCAGAgccgaataaaa                                                                >  2:81355/1‑231 (MQ=14)
                                                                                                                                                                      ttcGGAACCAGACCAACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg                                                              <  1:1100851/237‑1 (MQ=255)
                                                                                                                                                                      tGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGACCGAAGAACAGGTCGAACCGCGCAAAGCCGCCGTCGA‑CCCGGCTATTACACGCGCCAAAGCCCGCCAGCGAGAACAGCAACAGGCTAATGCCGAGCCCGAAGAACAGGTCAATCCACGCAAcgccgctcacgca                                                               >  2:859405/1‑231 (MQ=11)
                                                                                                                                                                           aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCt                                                         >  1:564441/1‑239 (MQ=255)
                                                                                                                                                                           aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt                                                         >  1:1303580/1‑239 (MQ=255)
                                                                                                                                                                           aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTATTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCg                                                           >  1:1240600/1‑237 (MQ=255)
                                                                                                                                                                             ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCCACCCGCGCAAAGCCGCCGTCGACGCCGCTAt                                                       >  1:722026/1‑239 (MQ=255)
                                                                                                                                                                                gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACCGGAACAGCAACAGGCCAATGCCGTACCAGAACAACAGGCTGATCCGCGAAAACACGCAGTAGAAACCGGTAtgg                                                     >  2:403392/1‑236 (MQ=11)
                                                                                                                                                                                     acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑CGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGGTCCGCGCAAAGCCGCCGTCGCAGCCGCCACTGCCCgc                                                >  1:421707/1‑237 (MQ=255)
                                                                                                                                                                                     acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa                                                >  1:771686/1‑238 (MQ=255)
                                                                                                                                                                                     acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa                                                >  1:1260993/1‑238 (MQ=255)
                                                                                                                                                                                         gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTTGCAGCCGATATTGCCCGAGCCaa                                           >  1:773580/1‑239 (MQ=255)
                                                                                                                                                                                               acgacaaagaccgccgTCGAAGACACTATAACACGCGCCAAAGAGCGAAACCTGGAACAACATAAGGCAAATACGGAACCAGAACAACAGGACGATCCGCGAAAAGCCGCCGTCGA‑AGCAGCTATCGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcg                                     <  2:86255/229‑1 (MQ=11)
                                                                                                                                                                                                  cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACACCAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCCCGCaa                                  >  2:785643/1‑239 (MQ=255)
                                                                                                                                                                                                  ccaaaatctgccgtacgaGCCTCTATCGCCAGTGCCTAGACGCCCAAGCTGGAACAGCAACAGAAAAATGCCGAACCAGAACACCAGGGTGAGCGGCGCAAAGCCGCGTTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCa                                   <  2:1237051/221‑1 (MQ=11)
                                                                                                                                                                                                   gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGCGCaa                                  >  1:488784/1‑238 (MQ=255)
                                                                                                                                                                                                       aactgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACggg                             >  1:891524/5‑239 (MQ=255)
                                                                                                                                                                                                        gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑CGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCGTATCCCGTACCCGAACAACAGGTCCGTCCCCGAGACGCGGCCGCCGACTCCGCCATTCCCCTCGCCCAAgcccaagaagcggc                            >  2:302822/1‑227 (MQ=14)
                                                                                                                                                                                                                          aTTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTATTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAACCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc          <  1:69731/239‑1 (MQ=255)
                                                                                                                                                                                                                             gCCCGAGCCAAGGCGCGCAAACTGGAACAGCAACAGTCTAATGCGGAACCAGAAGACCAGGGCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa       <  1:9709/239‑1 (MQ=14)
                                                                                                                                                                                                                                  tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCTGAACAACAGGTCGCTCCACGCAAAGCCGCCGCGCAAGCCGCTATTTCCCGGGCCACAGCTCGCACACCAGCACAGCATCCAGCTCATGccgtacccg  >  2:1126621/1‑231 (MQ=11)
                                                                                                                                                                                                                                  tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTCATGCGGAACCag  >  1:682947/1‑239 (MQ=255)
                                                                                                                                                                                                                                  tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAACCGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCag  >  2:1019005/1‑239 (MQ=255)
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               
GTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAG  >  NC_000913/1708483‑1708947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A