Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F9 I0 R1 80 116.8 2384848 97.0% 2313302 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,708,709 T→C 10.3% R597R (CGT→CGC)  rsxC → SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,7090TC10.3% 212.5 / 3.9 85R597R (CGT→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base T (38/32);  new base C (7/3);  total (48/37)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAG  >  NC_000913/1708474‑1708947
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
cGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGcc                                                                                                                                                                                                                                             <  1:135610/239‑1 (MQ=255)
   aTAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCaaa                                                                                                                                                                                                                                          >  2:1153031/1‑239 (MQ=255)
        aatGCAATTATTGCCGCACGGAAAGCCCTGAAACCGAAAACAAGAGCGAAACAGGCAAAATTGAAGAAAACGAACGCCGCGGCAACCGGTGCTTACCCAAGAAAAACCGCCGTTGAAGCAGCTAGCGTCCGCGCCAAAGCGCGCGAGCTGGAACAGCACCATGCTAATGCGGAACCAGATCATCAGGTCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCTTGCCAAAgcgcc                                                                                                                                                                                                                                     <  1:425489/237‑2 (MQ=18)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCCCGATTGCCCGCGCCAAAccgcgc                                                                                                                                                                                                                                    >  2:313629/1‑239 (MQ=255)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                    >  2:110456/1‑239 (MQ=255)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                    >  2:826669/1‑239 (MQ=255)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                    >  2:585093/1‑239 (MQ=255)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                                                                                                                                                                                                    >  1:352400/1‑239 (MQ=255)
         gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAGgcgcgc                                                                                                                                                                                                                                    >  1:113452/1‑239 (MQ=255)
           gCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                     <  2:625111/236‑1 (MQ=255)
           gCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCa                                                                                                                                                                                                                                   <  2:726632/238‑1 (MQ=255)
           ccaacagtggcagcaCGAGAAGCCGGGAGAGCGCAGGAGACAGCGAAACAGCAGGAACTGCAGCTAGCGAACGACGCAGGCACCGTTGCTGTTCCACGTAAAACTGCCGTTGAAGCAGCTCTCGCCCGCGCCAGAGCGCGCACGGTGGAACAGCAACAGGCTAATGCGGAACAGGAACACCAGGCCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATCGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                     <  1:46791/227‑1 (MQ=18)
           ccAATTATAGTAGTAGGGGAAGCGAGTAAAGCGCAAGCAAGAGCAAAAAAAGCAGAACTGCAGCAAACAAACGACGCAGCAACCGTTGCTGACCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAgcgcg                                                                                                                                                                                                                                     <  1:288968/235‑1 (MQ=21)
            cAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACATGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCaa                                                                                                                                                                                                                                  >  2:795258/1‑238 (MQ=255)
            cAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCaa                                                                                                                                                                                                                                  <  2:423603/238‑1 (MQ=255)
              attattGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCt                                                                                                                                                                                                                               <  2:532535/239‑1 (MQ=255)
               ttattGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTg                                                                                                                                                                                                                              >  2:332427/1‑239 (MQ=255)
                tattGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTgg                                                                                                                                                                                                                             <  2:547988/239‑1 (MQ=255)
                  ttGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGGGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGaa                                                                                                                                                                                                                           <  2:915612/239‑1 (MQ=255)
                    gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACa                                                                                                                                                                                                                         >  2:1051264/1‑239 (MQ=255)
                    gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCAGCGCAAAGCCGCCGTCGAAGCCGCTATAGCCCGTGCCAAAGCACGCAAGCTGGACCa                                                                                                                                                                                                                         >  2:931079/1‑239 (MQ=255)
                         aCGGGAGGCCCGGATAGCGGAAGCCAGGGGGAAACAGGCAGAACTGCAGAAACCTAACGCCGCAGCAACCGTTGCTGATCCTCCAAAAACTGCCGTTGAAGCAGCTACCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAGCAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                     <  1:525739/238‑1 (MQ=18)
                         aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                     <  2:1041777/238‑1 (MQ=255)
                         aCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                     <  1:940657/238‑1 (MQ=255)
                          cGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACa                                                                                                                                                                                                                   >  2:349679/1‑239 (MQ=255)
                            ggAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAg                                                                                                                                                                                                                  >  1:368925/1‑238 (MQ=255)
                                  ccGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAAt                                                                                                                                                                                                            >  2:1161705/1‑238 (MQ=255)
                                    gTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGCACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACGAAGCCGCTATATCCCGAGCCAAAGCGCGACAGCTGGAAccggaagcagataatggg                                                                                                                                                                                                         >  1:1057239/1‑222 (MQ=25)
                                      aaaGCGCAAGCCAGAGCGAACCGGGCAGAACTGCAGCAAACTAACGCGGCAGCAGCCGTGGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTAGCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                       <  1:1141068/239‑1 (MQ=255)
                                      aaaGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                       <  2:848140/239‑1 (MQ=255)
                                      aaaGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                       <  2:94902/239‑1 (MQ=255)
                                      aaaGCGCAAGCCAGAGCGAAACAGGAAGAACTGCGGCAAACTAAGGAGGCAGCAACCGTTGCTGACCCACGAAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                       <  1:332427/239‑1 (MQ=255)
                                        agctgaaGCCAGAACGAAACAGGCAGACCTGCGGCAAACTAACGACGCAGCAACCGTTGCTGAACAACGTAAAACGGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAc                                                                                                                                                                                                     <  1:855614/234‑1 (MQ=21)
                                           gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCCAACACCACAAGATGGCACATCAAACGGCTGATGCGGAccccg                                                                                                                                                                                                  >  1:1172137/1‑237 (MQ=21)
                                           ccAAGCCAGAGCGAAAAAGGCAGAACGGCAGAAAACTAAAGACGCAGCAACCGTTGCTAACCCACGTAAAACTGCCGTTGAAGCAGCTCTCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                  <  1:757941/238‑1 (MQ=21)
                                           acAAGCCAGAGCGAAAGCGGCACAACCGCAGCAAACGAACGACGCAGCAACCGCTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                  <  1:722438/238‑1 (MQ=255)
                                                    agCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAg                                                                                                                                                                                          >  2:779173/1‑238 (MQ=255)
                                                     gCGAAAAAGGCAAGACTCCAGGCAACTAACGACGCAGAACCCCCGGCGAATCCGCGAAAAACTGCCGTCGAAGCAGCTATCGCCCGGGAAAAAGCGGGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAgg                                                                                                                                                                                         <  1:962640/238‑1 (MQ=11)
                                                         aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGTCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAt                                                                                                                                                                                    <  2:249528/239‑1 (MQ=255)
                                                         aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGa                                                                                                                                                                                     >  2:581998/1‑238 (MQ=255)
                                                              gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAGAGGCCGATCcgc                                                                                                                                                                                >  2:982866/1‑238 (MQ=255)
                                                                      gcagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGCCAAAGCCCGCAAACCGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGGTCCACGCAAAccc                                                                                                                                                                        >  1:123470/1‑238 (MQ=17)
                                                                       cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGTCTAGCAACAGGCTAATGCGGAACCAGAATAACAGGTTGATCCGAGCAAAgctg                                                                                                                                                                       >  2:683895/1‑236 (MQ=18)
                                                                        agcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCTCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCCCGCAAAGCCGCCGCCGAAGCCGCTATTGCCCGTGCAAAAGCACGCAAGCTGGAACAGCAACAGGCTAAAGCCGAACCCGAAGAACAGGTCGAACCCCCCAAAgacgc                                                                                                                                                                      >  1:838751/1‑238 (MQ=18)
                                                                            aaCTAACGACGCAGCAACTGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGC‑GAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGa                                                                                                                                                                <  2:556202/239‑1 (MQ=255)
                                                                            aaCTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACCGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTACCCGTGCCAAAGCGCGCAACCTGGAACAGCAACAGGATAATGCGGAACCAGAAGAACCGGTCGATCAGCGCAAACCCACCATc                                                                                                                                                                  >  1:97727/1‑238 (MQ=18)
                                                                            aaCTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGAGGAACCAGACGAACAGGTCGATCCGGGCAAAgccgcgctcg                                                                                                                                                                 >  1:882559/1‑234 (MQ=255)
                                                                               tAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGaa                                                                                                                                                               >  2:1074639/1‑238 (MQ=255)
                                                                               tAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg                                                                                                                                                              <  2:352400/239‑1 (MQ=255)
                                                                                 acgacgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGACAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGcg                                                                                                                                                            >  1:972630/1‑238 (MQ=255)
                                                                                       cagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCTTAGCCGCTATTGCCCGTGCCAACGCGCGCAACCGGGAACAGCACGAGGCTACTCCGGAACCAAAAGAACAGGTCGATCCGCGCAAAGCCCCCGTCGaatacccc                                                                                                                                                         >  1:1112788/1‑230 (MQ=17)
                                                                                        agcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCCAtt                                                                                                                                                      >  2:536080/1‑238 (MQ=255)
                                                                                        agcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAAGAACAGGTCGATCCGCGCAAGGCACCCGTCGAATCCGCTAtt                                                                                                                                                      >  2:955679/1‑238 (MQ=255)
                                                                                                      aTCCACGTAAAACTGCCGTTGAAGCAGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCa                                                                                                                                       <  2:872584/239‑1 (MQ=255)
                                                                                                        ccACGTAAACCGGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGGGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg                                                                                                                                     <  2:1057239/239‑1 (MQ=255)
                                                                                                        ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg                                                                                                                                     <  2:1000548/239‑1 (MQ=255)
                                                                                                        ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg                                                                                                                                     <  2:368925/239‑1 (MQ=255)
                                                                                                           cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCTCGCAAAGCCACCGTCCAAGCCCCGATGGCCCgccccacacggcaca                                                                                                                                   >  1:1185490/1‑224 (MQ=14)
                                                                                                           cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCaa                                                                                                                                  >  2:1112377/1‑239 (MQ=255)
                                                                                                           cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCACCGTCGAAGCCGCTATTGCCCGTGCCCAAGCACACaa                                                                                                                                  >  2:517474/1‑239 (MQ=255)
                                                                                                                   ggacagtgtaggacatacgccccGCGCCAAAGCGCGCAACGAGGCAAGGCAACAGGAAGATGCGAAACCAGCACACCCGGACGATCCGCTCAAAGCCGCCGTCGAAGCCGCTATTGCCCTCGCAAAAGCGCCCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAATAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCACGCTGGAAc                                                                                                                          <  1:826669/219‑1 (MQ=14)
                                                                                                                     ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCAGGCAAGCTGGAACa                                                                                                                         >  2:632205/1‑238 (MQ=255)
                                                                                                                        atGATGCAGCCAGCGCCCTCCACAAAGCGCGCAAGCGGGAACAGCACAAGTCTAATGCGGACCCAGCACACCAGGTCGATCCGCGCAAAGCGCCCGTCGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGGGAAGGCGGAACCAGAAGACCAGGTCGATCCGCGCAACTCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                     <  1:1161705/238‑1 (MQ=14)
                                                                                                                         tGAGGCAGATCTCGACCGAGAAAACGCGCGGAAGCGGGCACAACAACAGCAAAATGCGGAACCAGAACACCAGGCCGATCCACGCAAAACCGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                     <  1:1051264/238‑1 (MQ=14)
                                                                                                                          gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCTGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACa                                                                                                                   >  2:31801/1‑239 (MQ=255)
                                                                                                                                         ggcgcAAAAGCGGGAAAGCTGGAACAGCAACAGGAAAAGGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGcc                                                                                                    <  1:795258/238‑1 (MQ=14)
                                                                                                                                           cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAAAAGGCTAATGCCGAGCCAg                                                                                                  >  2:539939/1‑239 (MQ=255)
                                                                                                                                               aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaaca                                                                                              <  2:636964/239‑1 (MQ=255)
                                                                                                                                                aaGCGGGCAAGCTGGAACAGCACCAGGCTAATGCGGAACCAGAACAACAGGACAAGCCGCGCAAAGCCGCCGTTGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaacaa                                                                                             <  2:838751/239‑1 (MQ=255)
                                                                                                                                                aaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaacaa                                                                                             <  2:277588/239‑1 (MQ=255)
                                                                                                                                                                    cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCACCAGGCTAATGCGGCACCAGAACAACAGGTTGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCACAAGCCAGCAACCGGAACCCGCAACAGGCTAAAGCGGCTGCAGAACAACAgtctgataagctcaaag                                                                          >  1:661551/1‑222 (MQ=11)
                                                                                                                                                                         ggCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAGGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCCCGCAAACGCGCCCAGCAACAGGCTCATCCGGAGCCAGAAAAACAGGTCGGAACACGCAAAAccgccg                                                                    >  1:469200/1‑239 (MQ=11)
                                                                                                                                                                              aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAAc                                                                                                                                                                                                                          >  2:249433/1‑84 (MQ=38)
                                                                                                                                                                                    aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGACCAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCt                                                         >  2:618780/1‑239 (MQ=255)
                                                                                                                                                                                    aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACCGGTTGATCCGCGCAAATCCGCCGTCGAAGCCGCTATGGCCCGTCCCCAGGCACGCAAGCTGCAACCGCAACAGACTCGTACGGAACCAGAACCACCGGTCGAACACCGCCCAgccgccagagatccggc                                                          >  1:314648/1‑227 (MQ=14)
                                                                                                                                                                                    aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAACCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGACGCCATTGCCCGGGCCCATGACAGCAAGCTGGACCAGCATAAGGATCTTACGGAGCAAGACAGACAGGCAGATCCGCGCaaatctgatgatgacgaggcc                                                         >  1:973858/1‑221 (MQ=11)
                                                                                                                                                                                          aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGc                                                    >  2:996717/1‑238 (MQ=255)
                                                                                                                                                                                              acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGCGCCAAAGCAAACAAAATGGACCAGCAACAGGCCAATGCCGTGCCAGAAAAAACGGCCGAACAGCGTAAAGCGGGCGGCGacatgcgtattgcccgc                                                >  1:882345/1‑222 (MQ=11)
                                                                                                                                                                                               caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAg                                               >  2:973118/1‑238 (MQ=255)
                                                                                                                                                                                                 ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAAAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCgcacca                                            >  2:363327/1‑234 (MQ=255)
                                                                                                                                                                                                    cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                     >  1:609407/1‑67 (MQ=35)
                                                                                                                                                                                                      aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCCGGAACAGCAACAGGCTAATGCCGAGCCAGTAAAACAGGACGATCCCCGCAAAGCCGCCGTCGACGCCGCAATTGccagtcccgacgc                                        >  1:1086334/1‑227 (MQ=14)
                                                                                                                                                                                                                   ggccgcgaaggCCGCTATTCCCCGGACAAAAGCGCGCAAACAGGCACAGCAGCAGCCAAATGCGGAACCAGAAAACCGGGACGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGaa                           <  1:585093/228‑1 (MQ=14)
                                                                                                                                                                                                                     ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACa                         >  2:1008283/1‑238 (MQ=255)
                                                                                                                                                                                                                         cGACGCGGCTAGTGCCCGCGCCAAAGCGCGCAAGGTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCaa                     <  2:882559/238‑1 (MQ=255)
                                                                                                                                                                                                                                           tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGCACAGCAACCGGCTAATGCGGAGCCag  >  2:670995/1‑239 (MQ=255)
                                                                                                                                                                                                                                           tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGAAACACCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCCGGAACAGCAACAGGCCAATGCCGAGCCAGAACAAAAGGTCGATCCGAGCCAAGCCGACGGAGAACCCGCTATTGCACGAGGCAAAGCACGCAAACCGGAACAGCAAAACGCTAAtctgacaacag  >  1:163754/1‑229 (MQ=11)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
CGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAG  >  NC_000913/1708474‑1708947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A