Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F2 I0 R1 88 153.3 2661736 98.2% 2613824 271.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 702,331 Δ1 bp 22.2% coding (421/1149 nt) nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913702,3300C.22.2% 363.2 / 108.4 135coding (422/1149 nt)nagAN‑acetylglucosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base C (49/54);  new base . (15/15);  total (65/70)
Fisher's exact test for biased strand distribution p-value = 8.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01

Only 100 of 141 total aligned reads displayed.

CGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702043‑702618
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                 
gcaGGATAGGGCACGCCAGGCAATTTTAACGACCGGTAATTTCCGGCATCCCGTTGTACAGATGGGTGTCAAAGGTAATCCCCGCGCGGAAACCAGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAGCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGTGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGc                                                                                                                                                                                                                                                                                                   <  2:540957/286‑1 (MQ=255)
cgAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGc                                                                                                                                                                                                                                                                                                   <  2:56269/288‑1 (MQ=255)
         cgcccgccAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGAATTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTa                                                                                                                                                                                                                                                                                          >  1:951734/1‑288 (MQ=255)
              gccaggccagGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAt                                                                                                                                                                                                                                                                                    >  2:734729/1‑289 (MQ=255)
                caggccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCATGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   <  2:805276/288‑1 (MQ=255)
                caggccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   <  1:68382/288‑1 (MQ=255)
                caggccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGAtt                                                                                                                                                                                                                                                                                   <  1:173192/288‑1 (MQ=255)
                    ccaggTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCa                                                                                                                                                                                                                                                                                 <  1:1028556/286‑1 (MQ=255)
                        gTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACgg                                                                                                                                                                                                                                                                          >  1:460196/1‑289 (MQ=255)
                             cGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCt                                                                                                                                                                                                                                                                      >  1:720864/1‑288 (MQ=255)
                              gACCGGTAATATACGGCATCGCGTTGTTAAGATGGGTGGGAAAGGGAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                                                                                                                                                                                                    <  1:805448/289‑1 (MQ=255)
                              gACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                                                                                                                                                                                                    <  1:1045024/289‑1 (MQ=255)
                                     aaTATACGGCATGGCGTTGTACAGATGGGTGGCAAACGTAATCCCAGCGCGGAAACCGGCTCTTGCTTCCTGCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAAGGACGTCGGCGTTTTCACACAGGAAATCGACCCGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGc                                                                                                                                                                                                                                                             <  2:573685/289‑1 (MQ=255)
                                          aCGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCt                                                                                                                                                                                                                                                       <  1:742377/289‑1 (MQ=255)
                                              cATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAAc                                                                                                                                                                                                                                                    >  2:955688/1‑289 (MQ=255)
                                                tCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGc                                                                                                                                                                                                                                                  <  2:820414/289‑1 (MQ=255)
                                                 cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAg                                                                                                                                                                                                                                                                 >  1:1119418/1‑273 (MQ=255)
                                                 cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGc                                                                                                                                                                                                                                                  >  2:857106/1‑288 (MQ=255)
                                                 cgcgTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGc                                                                                                                                                                                                                                                  >  1:664803/1‑288 (MQ=255)
                                                 cacgTTGGACACATGGGTGTCACAGGTAATCCCCGTGCGGAACCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGGGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATGTCCGGTGCGAGGGTCGCTTTTGTAAGGACGTCGGCGTTTTCACACAGGTAATCGACCTGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGcc                                                                                                                                                                                                                                                 <  2:1104343/287‑1 (MQ=255)
                                                        tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCTCAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCg                                                                                                                                                                                                                                          >  1:231170/1‑289 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTTCTGATGACTTCCGCAGGAACCATTTCCGGTTCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATTCACCAGCGCGGCTTCTGGCTTACGCATAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGGTTCAGCCACGGACCTTCCAGATGCAGACCTTACGCCTGCTACGGATgct                                                                                                                                                                                                                                    >  2:1037901/1‑287 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                        >  2:431489/1‑254 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                        <  1:431489/254‑1 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtt                                                                                                                                                                                                                                    >  2:797895/1‑289 (MQ=255)
                                                             aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGCTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTCCCAGATTCAGCCACGGCCCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtt                                                                                                                                                                                                                                    >  1:153579/1‑289 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAACCCTAACGCCTGATTGGGAGGtttgg                                                                                                                                                                                                                                 >  2:1044158/1‑286 (MQ=255)
                                                                  tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTAACAGATTCAGCCACGGACCTTCCAGCTGCATACCTAACGCCTGATTCGGAAGTTTTg                                                                                                                                                                                                                                 >  2:1065609/1‑288 (MQ=255)
                                                                      aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAgg                                                                                                                                                                                                                            <  1:857106/289‑1 (MQ=255)
                                                                      aaaGGTAATCCCCGCGCGGAAACCGGCTTTTCCTGCTTTCAACGTCGCGTTGGAGTGACCGGCAAAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACTAAATTCGGATTATGTGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAgg                                                                                                                                                                                                                            <  1:256781/289‑1 (MQ=255)
                                                                       aaGGTAATCCCCGCGCGTAAGCCGGCTTTGTCTTCTGTCAACGTCGCGTTGGAGTGACCAGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATTACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTGTTGCCAGATTCAGTCACTGACCTTCCAGATGCACACCTAACGCCTTATTCGGATGTTTTGCCTGGTa                                                                                                                                                                                                                          <  2:115401/289‑1 (MQ=255)
                                                                       aaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTa                                                                                                                                                                                                                          <  1:712767/289‑1 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAc                                                                                                                                                                                                                                                                        >  1:245666/1‑231 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGCTGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATaa                                                                                                                                                                                                               >  1:674113/1‑288 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATaa                                                                                                                                                                                                               >  2:767002/1‑288 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAAc                                                                                                                                                                                                              >  1:1248613/1‑289 (MQ=255)
                                                                                    cgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGCTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTACGATTATGGGTGCCTTTTTTTCCCAGTTTCAGCCACGGATCTTCCAGATGCAGACCTTACCCCTGATTCGGCCTTCTTGCCAggcccacctccataa                                                                                                                                                                                                               >  2:510653/1‑275 (MQ=255)
                                                                                         aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTCTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACgcgc                                                                                                                                                                                                          >  1:848189/1‑288 (MQ=255)
                                                                                          aaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCa                                                                                                                                                                                                         <  1:340814/288‑1 (MQ=255)
                                                                                            ccGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                      <  2:1104568/289‑1 (MQ=255)
                                                                                            ccGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGc                                                                                                                                                                                                      <  2:580476/289‑1 (MQ=255)
                                                                                                     gCTTCTTTCAACGTCGCGTTGGAGTGAACGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAGTTTTTTCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtca                                                                                                                                                                                             >  2:487752/1‑289 (MQ=255)
                                                                                                                 gTCGCGTTTGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGc                                                                                                                                                                                 <  1:431421/289‑1 (MQ=255)
                                                                                                                   cgcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTTGCGCATAACGCGCACGCCATGTTCCATCAGCTCATCGCtg                                                                                                                                                                               >  2:609192/1‑289 (MQ=255)
                                                                                                                   cgcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtg                                                                                                                                                                               <  1:734796/289‑1 (MQ=255)
                                                                                                                    gcgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCCTGCCCTGTTTCATCAGCCCATCGCtggt                                                                                                                                                                             >  2:287215/1‑289 (MQ=255)
                                                                                                                     cgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                                                                                                                                                                                                    <  1:39609/201‑1 (MQ=255)
                                                                                                                     cgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                                                                                                                                                                                                    >  2:39609/1‑201 (MQ=255)
                                                                                                                     cgTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGAGTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtgg                                                                                                                                                                              <  2:339446/288‑1 (MQ=255)
                                                                                                                         ggAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGa                                                                                                                                                                        <  1:797895/289‑1 (MQ=255)
                                                                                                                           aGTGACCGACAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCTGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGa                                                                                                                                                                        <  2:336383/288‑1 (MQ=255)
                                                                                                                                    cAGAAACCACAATCCCTGCATTTGCCAGTTTGCTGAGGACGTCCGCAGGAACCATTTCCGGGGCCAGGGTCACTTTGGTAATGACGTTGGTGTTTTCACACAGGAAATCGACCAGGGCGGGAGCAGGCTTACGCATAAAATTCGGATTATGGGTG‑CTTTGTTTACCATATTCAGCTACGGATCGTCCAGATGCAGACCTGACGCGTGATTCGGATGTTTTGCCAGGTTCTCGCGCATAACGCGCACTCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCgg                                                                                                                                                              <  2:890572/288‑1 (MQ=255)
                                                                                                                                       aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTTATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:664803/289‑1 (MQ=255)
                                                                                                                                        aaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:262813/287‑1 (MQ=255)
                                                                                                                                         aCCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGCTGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCCCACGCCCTGTTTCATCAGCTCATCGCCGGTGGTGATAAGAGTCGGCCGAta                                                                                                                                                        >  2:1088560/1‑289 (MQ=255)
                                                                                                                                            acaATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGGGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGAtagt                                                                                                                                                      <  2:562708/289‑1 (MQ=255)
                                                                                                                                                          tGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGGTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGAt                                                                                                                                       >  1:739737/1‑289 (MQ=255)
                                                                                                                                                          tGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGAt                                                                                                                                       <  1:1252658/289‑1 (MQ=255)
                                                                                                                                                                            ttCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGc                                                                                                                     <  1:1118284/289‑1 (MQ=255)
                                                                                                                                                                                      aCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTTGCTTTCTGCATGATTTCCa                                                                                                           >  1:934965/1‑288 (MQ=255)
                                                                                                                                                                                           gtCCGGTGGCAAGGTCACTTTTGGAATGACGTCGGCGTTATCACAACGGAAATCGGCCAGTGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGAGGTGTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCAGCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑CGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGtt                                                                                                      <  2:57008/288‑1 (MQ=255)
                                                                                                                                                                                                        gTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGAc                                                                                           <  1:1063256/287‑1 (MQ=255)
                                                                                                                                                                                                           aCTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCtt                                                                                      <  2:1248613/289‑1 (MQ=255)
                                                                                                                                                                                                             tttGGTAATGACGTCGGCGCTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGACTTTTTTTACAAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAAAGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTAGGCAGATAGTT‑AGTACAGCCTGATTTCCCCTTTGCTTTCTGCATGATCTCCAGCGTTTCCACGCTGACCGCTCCa                                                                                    >  2:1063672/1‑289 (MQ=255)
                                                                                                                                                                                                                  tAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCgg                                                                                <  2:448092/288‑1 (MQ=255)
                                                                                                                                                                                                                      gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCg                                                                           <  1:565569/289‑1 (MQ=255)
                                                                                                                                                                                                                       aCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCTCGCTGACCGCTTCAGCGGTGTCGt                                                                          >  2:14397/1‑289 (MQ=255)
                                                                                                                                                                                                                           cGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAGCGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTaa                                                                       >  1:1137279/1‑288 (MQ=255)
                                                                                                                                                                                                                           cGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTaa                                                                       >  2:60213/1‑288 (MQ=255)
                                                                                                                                                                                                                           cGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGAGGCATACCTAACGCCTGATCCGGATGATTTGCCAGGTACTCGCGCATAACGCGCAAGCCCTGTTTCATCAGCTCATACCTGGTGGTGATAAGAGTCAGCAGATAGTT‑AGTACAGCCTGATTTCGCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTACGCGGCGTCGTTaaa                                                                      >  2:326406/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCtt                                                                                      <  2:449664/266‑1 (MQ=255)
                                                                                                                                                                                                                                  ttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCtt                                                                                      >  1:449664/1‑266 (MQ=255)
                                                                                                                                                                                                                                       acaGGAAATCGACCAGCGTGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGGGCATAACGTGCACCCTCTGTTTCACCAGCTCATTGCCGGTGGTGATAAGCGTCGGAAGAGAGTTAAGTA‑AGCCTGATTTCGCATTGGCCTTCTGCATGATTTCAGGCCTTTCTACGTAGACCGCCTCAGCGTGGTCGTTAATCTGtcgtcggcc                                                          >  2:1131300/1‑281 (MQ=255)
                                                                                                                                                                                                                                            aaaTCGACCAGCGCGGCATCAGGCTTACGCACAATATTCGGATTATGGGTGCCTTGTTTTACCAGATTCAGCCACGGACGTTCCAGATGCAGACCTAACGCCGGATTCTGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGCTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTAcgccgccgc                                                        <  1:91080/286‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTCGACCAGCGCGGCATCAGGCTTACGCACAAACTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCAAGGTACTCGCGCATAACGCGCACGCCCTGTTTCAACAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACTCTGACCGATTCAGTGGTGTCGCTAAACTGTACGCCGCCGCAGc                                                     >  2:182111/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTTTCTTTAAACTGTACGCCGCCGCAGCCGTTTa                                               >  2:871222/1‑285 (MQ=255)
                                                                                                                                                                                                                                                      gcgcGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTATCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑CGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGGGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACt                                            >  1:1018467/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTg                                           >  1:613240/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          ggtgtcagcgtttagCACAAAATTCGGGTTATGGATGCCTATTTTTGCCAGATTCGTCAACGGACCTTCCAGGTGCAGCCCTAACTACTGATGCGGATTTTATGCCAGGTACTCTCTCATAACGCGCACGCCCTGTTTCATCAGCTCATCTCTGGTGGTGATAAGCGTCGGCAGTTAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACTCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcaca                                       <  2:439732/275‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACGAAATTCGGATTATGAGTGCCTTTTTTTACCAGATTCAGCCACGGACCGTCCAGGTGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCGGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  2:231170/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAGCGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  2:1137279/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGcac                                        <  1:609192/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            cATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCGGTTTAACTGCACAt                                      <  1:322472/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ggCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCCCATCGCTGGTGGTGATAAGCCTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATaa                                >  1:546514/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 ggCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCAACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCCCATCGCTGGTGGTGATAAGCGTCGGCAGATCGTT‑AGTACACCCTGATTTCTCATTGGCTTTCTGCATGATTTCAAGCGTTTCCACGCTGACCGCTTGAGCGGTGTCGTCAAACTGTACGCCCCCGCCGCCGTTTAACTGcccaaccagca                                >  2:379322/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                   cTTACGCACAAAATTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATaa                                <  1:1004580/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAAcc                            <  2:613240/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGCCCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCACTGTTTCATCAGCTCCTCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGTTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCg                           >  1:533770/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAg                                                                                                                                                           <  2:1180539/162‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCCCGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCg                           >  2:485353/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aCGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCCCATCGATAAAACCg                           >  2:583270/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          gcaAAAGTCGGATTATGGGTGGCTTGTTTTACCAGTGTCAGCCACGGACCTGCAAGTTGCAGAGCTAACGCCGGGTTCGGAAGTGTTGCGAGGTACTCGCGCATAAGCCGCACGCCCTGTTTCATCAGGTCATCGCTGGTGGTGGTAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCATCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACGGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCgggg                        <  2:185183/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aaaaTTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCg                                                                                                                                                                  >  2:442463/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                            aaaaTTCGGATTATGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCg                                                                                                                                                                  <  1:442463/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     gttATGTGTGCCGTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGGACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCCTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCAGTGGCGTTCTGGATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACAGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGc             <  2:546514/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      ttATGGGGGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACGCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGcc            <  1:379322/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         tGGGTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGt        >  1:1151829/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                          gggTG‑CTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTc      >  1:1295451/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                               ccTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTg  >  1:1168658/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                               ccTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGCGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTTTCGTTAAACTGTACGCCGCCGCCGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCactt  >  2:1307381/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                 
CGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTT‑AGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTCCACGCTGACCGCTTCAGCGGTGTCGTTAAACTGTACGCCGCCGCAGCCGTTTAACTGCACATCGATAAAACCGGGGGAGAGAATGGCCCCGTTCAGTG  >  NC_000913/702043‑702618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A